HEADER ELECTRON TRANSPORT 28-NOV-95 1XOB TITLE THIOREDOXIN (REDUCED DITHIO FORM), NMR, 20 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRX-SH2; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: REDUCED DITHIO FORM SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: C1A; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PBHK8 KEYWDS ELECTRON TRANSPORT, REDOX-ACTIVE CENTER EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.-F.JENG,A.P.CAMPBELL,T.BEGLEY,A.HOLMGREN,D.A.CASE,P.E.WRIGHT, AUTHOR 2 H.J.DYSON REVDAT 3 29-NOV-17 1XOB 1 REMARK HELIX REVDAT 2 24-FEB-09 1XOB 1 VERSN REVDAT 1 10-JUN-96 1XOB 0 SPRSDE 10-JUN-96 1XOB 1TRX JRNL AUTH M.F.JENG,A.P.CAMPBELL,T.BEGLEY,A.HOLMGREN,D.A.CASE, JRNL AUTH 2 P.E.WRIGHT,H.J.DYSON JRNL TITL HIGH-RESOLUTION SOLUTION STRUCTURES OF OXIDIZED AND REDUCED JRNL TITL 2 ESCHERICHIA COLI THIOREDOXIN. JRNL REF STRUCTURE V. 2 853 1994 JRNL REFN ISSN 0969-2126 JRNL PMID 7812718 JRNL DOI 10.1016/S0969-2126(94)00086-7 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.CHANDRASEKHAR,A.P.CAMPBELL,M.F.JENG,A.HOLMGREN,H.J.DYSON REMARK 1 TITL EFFECT OF DISULFIDE BRIDGE FORMATION ON THE NMR SPECTRUM OF REMARK 1 TITL 2 A PROTEIN: STUDIES ON OXIDIZED AND REDUCED ESCHERICHIA COLI REMARK 1 TITL 3 THIOREDOXIN REMARK 1 REF J.BIOMOL.NMR V. 4 411 1994 REMARK 1 REFN ISSN 0925-2738 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.CHANDRASEKHAR,G.KRAUSE,A.HOLMGREN,H.J.DYSON REMARK 1 TITL ASSIGNMENT OF THE 15N NMR SPECTRA OF REDUCED AND OXIDIZED REMARK 1 TITL 2 ESCHERICHIA COLI THIOREDOXIN REMARK 1 REF FEBS LETT. V. 284 178 1991 REMARK 1 REFN ISSN 0014-5793 REMARK 1 REFERENCE 3 REMARK 1 AUTH H.J.DYSON,G.P.GIPPERT,D.A.CASE,A.HOLMGREN,P.E.WRIGHT REMARK 1 TITL THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE REDUCED FORM OF REMARK 1 TITL 2 ESCHERICHIA COLI THIOREDOXIN DETERMINED BY NUCLEAR MAGNETIC REMARK 1 TITL 3 RESONANCE SPECTROSCOPY REMARK 1 REF BIOCHEMISTRY V. 29 4129 1990 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH H.J.DYSON,A.HOLMGREN,P.E.WRIGHT REMARK 1 TITL ASSIGNMENT OF THE PROTON NMR SPECTRUM OF REDUCED AND REMARK 1 TITL 2 OXIDIZED THIOREDOXIN: SEQUENCE-SPECIFIC ASSIGNMENTS, REMARK 1 TITL 3 SECONDARY STRUCTURE, AND GLOBAL FOLD REMARK 1 REF BIOCHEMISTRY V. 28 7074 1989 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : PEARLMAN,CASE,CALDWELL,SIEBEL,SINGH,WEINER,KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XOB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177299. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 16 -60.42 -108.99 REMARK 500 1 ASN A 63 67.36 -117.15 REMARK 500 2 ASP A 2 -136.88 -166.87 REMARK 500 2 VAL A 16 -62.86 -120.77 REMARK 500 3 ASP A 2 -73.53 60.79 REMARK 500 3 LYS A 18 30.67 -93.00 REMARK 500 3 ASN A 63 67.11 -119.26 REMARK 500 4 ASP A 2 -71.79 58.60 REMARK 500 4 LYS A 18 31.72 -91.98 REMARK 500 4 ASP A 20 54.33 -108.70 REMARK 500 4 ASN A 63 68.91 -119.83 REMARK 500 8 TYR A 49 30.50 -98.86 REMARK 500 9 LYS A 3 46.10 -140.28 REMARK 500 9 ASN A 83 71.52 55.42 REMARK 500 10 LYS A 18 42.33 -91.36 REMARK 500 10 ASN A 63 67.00 -118.11 REMARK 500 12 ASP A 2 -56.33 -23.95 REMARK 500 12 LYS A 18 33.54 -93.68 REMARK 500 12 ALA A 19 81.47 -68.94 REMARK 500 13 VAL A 16 -61.37 -120.48 REMARK 500 13 ASN A 63 72.31 -119.87 REMARK 500 15 ASP A 2 -70.81 63.89 REMARK 500 15 ASN A 83 70.81 51.01 REMARK 500 16 LYS A 18 35.32 -91.64 REMARK 500 18 VAL A 16 -60.29 -94.14 REMARK 500 18 ASP A 20 36.25 -99.52 REMARK 500 18 ASN A 63 70.79 -119.76 REMARK 500 19 LYS A 18 30.13 -96.83 REMARK 500 19 ASN A 63 71.83 -118.39 REMARK 500 20 ASP A 2 -104.66 48.16 REMARK 500 20 LYS A 18 32.06 -96.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 70 0.18 SIDE CHAIN REMARK 500 2 TYR A 49 0.08 SIDE CHAIN REMARK 500 2 TYR A 70 0.14 SIDE CHAIN REMARK 500 2 ARG A 73 0.10 SIDE CHAIN REMARK 500 3 TYR A 49 0.09 SIDE CHAIN REMARK 500 3 TYR A 70 0.17 SIDE CHAIN REMARK 500 4 TYR A 70 0.15 SIDE CHAIN REMARK 500 5 PHE A 12 0.08 SIDE CHAIN REMARK 500 5 TYR A 49 0.12 SIDE CHAIN REMARK 500 5 TYR A 70 0.08 SIDE CHAIN REMARK 500 5 PHE A 102 0.08 SIDE CHAIN REMARK 500 6 TYR A 70 0.12 SIDE CHAIN REMARK 500 6 PHE A 102 0.09 SIDE CHAIN REMARK 500 7 TYR A 70 0.14 SIDE CHAIN REMARK 500 7 ARG A 73 0.10 SIDE CHAIN REMARK 500 7 PHE A 102 0.08 SIDE CHAIN REMARK 500 8 TYR A 70 0.14 SIDE CHAIN REMARK 500 9 TYR A 49 0.08 SIDE CHAIN REMARK 500 9 TYR A 70 0.07 SIDE CHAIN REMARK 500 9 ARG A 73 0.10 SIDE CHAIN REMARK 500 10 TYR A 49 0.08 SIDE CHAIN REMARK 500 10 TYR A 70 0.13 SIDE CHAIN REMARK 500 11 TYR A 49 0.07 SIDE CHAIN REMARK 500 11 TYR A 70 0.09 SIDE CHAIN REMARK 500 12 TYR A 70 0.20 SIDE CHAIN REMARK 500 13 TYR A 70 0.14 SIDE CHAIN REMARK 500 13 ARG A 73 0.10 SIDE CHAIN REMARK 500 14 TYR A 70 0.17 SIDE CHAIN REMARK 500 15 TYR A 70 0.17 SIDE CHAIN REMARK 500 16 TYR A 49 0.10 SIDE CHAIN REMARK 500 16 TYR A 70 0.14 SIDE CHAIN REMARK 500 17 TYR A 70 0.10 SIDE CHAIN REMARK 500 17 ARG A 73 0.10 SIDE CHAIN REMARK 500 18 TYR A 70 0.17 SIDE CHAIN REMARK 500 19 TYR A 70 0.17 SIDE CHAIN REMARK 500 19 ARG A 73 0.11 SIDE CHAIN REMARK 500 20 TYR A 70 0.16 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1XOB A 1 108 UNP P0AA25 THIO_ECOLI 1 108 SEQRES 1 A 108 SER ASP LYS ILE ILE HIS LEU THR ASP ASP SER PHE ASP SEQRES 2 A 108 THR ASP VAL LEU LYS ALA ASP GLY ALA ILE LEU VAL ASP SEQRES 3 A 108 PHE TRP ALA GLU TRP CYS GLY PRO CYS LYS MET ILE ALA SEQRES 4 A 108 PRO ILE LEU ASP GLU ILE ALA ASP GLU TYR GLN GLY LYS SEQRES 5 A 108 LEU THR VAL ALA LYS LEU ASN ILE ASP GLN ASN PRO GLY SEQRES 6 A 108 THR ALA PRO LYS TYR GLY ILE ARG GLY ILE PRO THR LEU SEQRES 7 A 108 LEU LEU PHE LYS ASN GLY GLU VAL ALA ALA THR LYS VAL SEQRES 8 A 108 GLY ALA LEU SER LYS GLY GLN LEU LYS GLU PHE LEU ASP SEQRES 9 A 108 ALA ASN LEU ALA HELIX 1 H1 SER A 11 LYS A 18 1 8 HELIX 2 H2 GLY A 33 GLU A 48 1 16 HELIX 3 H3 ILE A 60 LYS A 69 5DISTORTED 10 HELIX 4 H4 LYS A 96 LEU A 107 1 12 SHEET 1 B1 5 ILE A 4 THR A 8 0 SHEET 2 B1 5 LEU A 53 ASN A 59 1 N LYS A 57 O ILE A 5 SHEET 3 B1 5 ALA A 22 ALA A 29 1 N ASP A 26 O ALA A 56 SHEET 4 B1 5 PRO A 76 LYS A 82 -1 N LEU A 79 O VAL A 25 SHEET 5 B1 5 ALA A 88 GLY A 92 -1 N LYS A 90 O LEU A 78 CISPEP 1 ILE A 75 PRO A 76 1 -1.14 CISPEP 2 ILE A 75 PRO A 76 2 -0.46 CISPEP 3 ILE A 75 PRO A 76 3 -1.34 CISPEP 4 ILE A 75 PRO A 76 4 -0.37 CISPEP 5 ILE A 75 PRO A 76 5 -1.62 CISPEP 6 ILE A 75 PRO A 76 6 -1.37 CISPEP 7 ILE A 75 PRO A 76 7 -1.80 CISPEP 8 ILE A 75 PRO A 76 8 0.07 CISPEP 9 ILE A 75 PRO A 76 9 -1.53 CISPEP 10 ILE A 75 PRO A 76 10 -0.31 CISPEP 11 ILE A 75 PRO A 76 11 -0.86 CISPEP 12 ILE A 75 PRO A 76 12 -1.09 CISPEP 13 ILE A 75 PRO A 76 13 -1.92 CISPEP 14 ILE A 75 PRO A 76 14 -1.68 CISPEP 15 ILE A 75 PRO A 76 15 -1.47 CISPEP 16 ILE A 75 PRO A 76 16 0.13 CISPEP 17 ILE A 75 PRO A 76 17 -0.44 CISPEP 18 ILE A 75 PRO A 76 18 -0.18 CISPEP 19 ILE A 75 PRO A 76 19 -0.96 CISPEP 20 ILE A 75 PRO A 76 20 -1.12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1