data_1XQP # _entry.id 1XQP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1XQP RCSB RCSB030655 WWPDB D_1000030655 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1XQO _pdbx_database_related.details 'Uncomplexed native form of the same protein' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XQP _pdbx_database_status.recvd_initial_deposition_date 2004-10-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lingaraju, G.M.' 1 'Sartori, A.A.' 2 'Kostrewa, D.' 3 'Prota, A.E.' 4 'Jiricny, J.' 5 'Winkler, F.K.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'A DNA glycosylase from Pyrobaculum aerophilum with an 8-oxoguanine binding mode and a noncanonical helix-hairpin-helix structure' Structure 13 87 98 2005 STRUE6 UK 0969-2126 2005 ? 15642264 10.1016/j.str.2004.10.011 1 'A novel highly thermostable 8-oxoguanine DNA glycosylase from Pyrobaculum aerophilum' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lingaraju, G.M.' 1 primary 'Sartori, A.A.' 2 primary 'Kostrewa, D.' 3 primary 'Prota, A.E.' 4 primary 'Jiricny, J.' 5 primary 'Winkler, F.K.' 6 1 'Sartori, A.A.' 7 1 'Lingaraju, G.M.' 8 1 'Hunziker, P.' 9 1 'Winkler, F.K.' 10 1 'Jiricny, J.' 11 # _cell.entry_id 1XQP _cell.length_a 72.220 _cell.length_b 98.110 _cell.length_c 36.170 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1XQP _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '8-oxoguanine DNA glycosylase' 29511.445 1 ? ? ? ? 2 non-polymer syn "2'-DEOXY-8-OXOGUANOSINE" 283.241 2 ? ? ? ? 3 water nat water 18.015 227 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAAESQLKRVIETLRRLGIEEVLKLERRDPQYRAVCNVVKRHGETVGSRLAMLNALISYRLTGKGEEHWEYFGKYFSQLE VIDLCRDFLKYIETSPFLKIGVEARKKRALKACDYVPNLEDLGLTLRQLSHIVGARREQKTLVFTIKILNYAYMCSRGVN RVLPFDIPIPVDYRVARLTWCAGLIDFPPEEALRRYEAVQKIWDAVARETGIPPLHLDTLLWLAGRAVLYGENLHGVPKE VIALFQWRGGCRPPSE ; _entity_poly.pdbx_seq_one_letter_code_can ;MAAESQLKRVIETLRRLGIEEVLKLERRDPQYRAVCNVVKRHGETVGSRLAMLNALISYRLTGKGEEHWEYFGKYFSQLE VIDLCRDFLKYIETSPFLKIGVEARKKRALKACDYVPNLEDLGLTLRQLSHIVGARREQKTLVFTIKILNYAYMCSRGVN RVLPFDIPIPVDYRVARLTWCAGLIDFPPEEALRRYEAVQKIWDAVARETGIPPLHLDTLLWLAGRAVLYGENLHGVPKE VIALFQWRGGCRPPSE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ALA n 1 4 GLU n 1 5 SER n 1 6 GLN n 1 7 LEU n 1 8 LYS n 1 9 ARG n 1 10 VAL n 1 11 ILE n 1 12 GLU n 1 13 THR n 1 14 LEU n 1 15 ARG n 1 16 ARG n 1 17 LEU n 1 18 GLY n 1 19 ILE n 1 20 GLU n 1 21 GLU n 1 22 VAL n 1 23 LEU n 1 24 LYS n 1 25 LEU n 1 26 GLU n 1 27 ARG n 1 28 ARG n 1 29 ASP n 1 30 PRO n 1 31 GLN n 1 32 TYR n 1 33 ARG n 1 34 ALA n 1 35 VAL n 1 36 CYS n 1 37 ASN n 1 38 VAL n 1 39 VAL n 1 40 LYS n 1 41 ARG n 1 42 HIS n 1 43 GLY n 1 44 GLU n 1 45 THR n 1 46 VAL n 1 47 GLY n 1 48 SER n 1 49 ARG n 1 50 LEU n 1 51 ALA n 1 52 MET n 1 53 LEU n 1 54 ASN n 1 55 ALA n 1 56 LEU n 1 57 ILE n 1 58 SER n 1 59 TYR n 1 60 ARG n 1 61 LEU n 1 62 THR n 1 63 GLY n 1 64 LYS n 1 65 GLY n 1 66 GLU n 1 67 GLU n 1 68 HIS n 1 69 TRP n 1 70 GLU n 1 71 TYR n 1 72 PHE n 1 73 GLY n 1 74 LYS n 1 75 TYR n 1 76 PHE n 1 77 SER n 1 78 GLN n 1 79 LEU n 1 80 GLU n 1 81 VAL n 1 82 ILE n 1 83 ASP n 1 84 LEU n 1 85 CYS n 1 86 ARG n 1 87 ASP n 1 88 PHE n 1 89 LEU n 1 90 LYS n 1 91 TYR n 1 92 ILE n 1 93 GLU n 1 94 THR n 1 95 SER n 1 96 PRO n 1 97 PHE n 1 98 LEU n 1 99 LYS n 1 100 ILE n 1 101 GLY n 1 102 VAL n 1 103 GLU n 1 104 ALA n 1 105 ARG n 1 106 LYS n 1 107 LYS n 1 108 ARG n 1 109 ALA n 1 110 LEU n 1 111 LYS n 1 112 ALA n 1 113 CYS n 1 114 ASP n 1 115 TYR n 1 116 VAL n 1 117 PRO n 1 118 ASN n 1 119 LEU n 1 120 GLU n 1 121 ASP n 1 122 LEU n 1 123 GLY n 1 124 LEU n 1 125 THR n 1 126 LEU n 1 127 ARG n 1 128 GLN n 1 129 LEU n 1 130 SER n 1 131 HIS n 1 132 ILE n 1 133 VAL n 1 134 GLY n 1 135 ALA n 1 136 ARG n 1 137 ARG n 1 138 GLU n 1 139 GLN n 1 140 LYS n 1 141 THR n 1 142 LEU n 1 143 VAL n 1 144 PHE n 1 145 THR n 1 146 ILE n 1 147 LYS n 1 148 ILE n 1 149 LEU n 1 150 ASN n 1 151 TYR n 1 152 ALA n 1 153 TYR n 1 154 MET n 1 155 CYS n 1 156 SER n 1 157 ARG n 1 158 GLY n 1 159 VAL n 1 160 ASN n 1 161 ARG n 1 162 VAL n 1 163 LEU n 1 164 PRO n 1 165 PHE n 1 166 ASP n 1 167 ILE n 1 168 PRO n 1 169 ILE n 1 170 PRO n 1 171 VAL n 1 172 ASP n 1 173 TYR n 1 174 ARG n 1 175 VAL n 1 176 ALA n 1 177 ARG n 1 178 LEU n 1 179 THR n 1 180 TRP n 1 181 CYS n 1 182 ALA n 1 183 GLY n 1 184 LEU n 1 185 ILE n 1 186 ASP n 1 187 PHE n 1 188 PRO n 1 189 PRO n 1 190 GLU n 1 191 GLU n 1 192 ALA n 1 193 LEU n 1 194 ARG n 1 195 ARG n 1 196 TYR n 1 197 GLU n 1 198 ALA n 1 199 VAL n 1 200 GLN n 1 201 LYS n 1 202 ILE n 1 203 TRP n 1 204 ASP n 1 205 ALA n 1 206 VAL n 1 207 ALA n 1 208 ARG n 1 209 GLU n 1 210 THR n 1 211 GLY n 1 212 ILE n 1 213 PRO n 1 214 PRO n 1 215 LEU n 1 216 HIS n 1 217 LEU n 1 218 ASP n 1 219 THR n 1 220 LEU n 1 221 LEU n 1 222 TRP n 1 223 LEU n 1 224 ALA n 1 225 GLY n 1 226 ARG n 1 227 ALA n 1 228 VAL n 1 229 LEU n 1 230 TYR n 1 231 GLY n 1 232 GLU n 1 233 ASN n 1 234 LEU n 1 235 HIS n 1 236 GLY n 1 237 VAL n 1 238 PRO n 1 239 LYS n 1 240 GLU n 1 241 VAL n 1 242 ILE n 1 243 ALA n 1 244 LEU n 1 245 PHE n 1 246 GLN n 1 247 TRP n 1 248 ARG n 1 249 GLY n 1 250 GLY n 1 251 CYS n 1 252 ARG n 1 253 PRO n 1 254 PRO n 1 255 SER n 1 256 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pyrobaculum _entity_src_gen.pdbx_gene_src_gene Pa-AGOG _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrobaculum aerophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 13773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28C(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8ZVK6_PYRAE _struct_ref.pdbx_db_accession Q8ZVK6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAAESQLKRVIETLRRLGIEEVLKLERRDPQYRAVCNVVKRHGETVGSRLAMLNALISYRLTGKGEEHWEYFGKYFSQLE VIDLCRDFLKYIETSPFLKIGVEARKKRALKACDYVPNLEDLGLTLRQLSHIVGARREQKTLVFTIKILNYAYMCSRGVN RVLPFDIPIPVDYRVARLTWCAGLIDFPPEEALRRYEAVQKIWDAVARETGIPPLHLDTLLWLAGRAVLYGENLHGVPKE VIALFQWRGGCRPPSE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XQP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 256 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8ZVK6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 256 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 256 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8HG non-polymer . "2'-DEOXY-8-OXOGUANOSINE" ? 'C10 H13 N5 O5' 283.241 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1XQP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 4000, HEPES-NaOH, NaCl, Dithio threitol, Dimethyl sulfoxide, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2003-11-14 _diffrn_detector.details 'Osmic mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Osmic Mirros' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ENRAF-NONIUS FR591' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1XQP _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.69 _reflns.d_resolution_low 57.74 _reflns.number_all 28623 _reflns.number_obs 28623 _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value 0.054 _reflns.pdbx_netI_over_sigmaI 17.0 _reflns.B_iso_Wilson_estimate 32.6 _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.69 _reflns_shell.d_res_low 1.8 _reflns_shell.percent_possible_all 90.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.578 _reflns_shell.meanI_over_sigI_obs 3.47 _reflns_shell.pdbx_redundancy 6.12 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4548 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1XQP _refine.ls_number_reflns_obs 27180 _refine.ls_number_reflns_all 27180 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40 _refine.ls_d_res_high 1.69 _refine.ls_percent_reflns_obs 96.71 _refine.ls_R_factor_obs 0.18467 _refine.ls_R_factor_all 0.18467 _refine.ls_R_factor_R_work 0.18258 _refine.ls_R_factor_R_free 0.22479 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1452 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 28.831 _refine.aniso_B[1][1] -0.16 _refine.aniso_B[2][2] -0.40 _refine.aniso_B[3][3] 0.56 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.115 _refine.pdbx_overall_ESU_R_Free 0.114 _refine.overall_SU_ML 0.084 _refine.overall_SU_B 4.829 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1XQP _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs 0.115 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free 0.114 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2049 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 227 _refine_hist.number_atoms_total 2316 _refine_hist.d_res_high 1.69 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 2153 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2037 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.609 1.987 ? 2925 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.428 3.000 ? 4706 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.036 5.000 ? 252 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 29.615 21.856 ? 97 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.171 15.000 ? 378 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.831 15.000 ? 25 'X-RAY DIFFRACTION' ? r_chiral_restr 0.156 0.200 ? 323 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 2324 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 464 'X-RAY DIFFRACTION' ? r_nbd_refined 0.208 0.200 ? 409 'X-RAY DIFFRACTION' ? r_nbd_other 0.175 0.200 ? 1813 'X-RAY DIFFRACTION' ? r_nbtor_other 0.083 0.200 ? 1051 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.153 0.200 ? 117 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.135 0.200 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.280 0.200 ? 49 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.127 0.200 ? 6 'X-RAY DIFFRACTION' ? r_mcbond_it 1.010 1.500 ? 1643 'X-RAY DIFFRACTION' ? r_mcbond_other 0.204 1.500 ? 511 'X-RAY DIFFRACTION' ? r_mcangle_it 1.128 2.000 ? 2040 'X-RAY DIFFRACTION' ? r_scbond_it 1.937 3.000 ? 1098 'X-RAY DIFFRACTION' ? r_scangle_it 2.738 4.500 ? 885 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.690 _refine_ls_shell.d_res_low 1.734 _refine_ls_shell.number_reflns_R_work 1830 _refine_ls_shell.R_factor_R_work 0.304 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.388 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 104 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1XQP _struct.title 'Crystal structure of 8-oxoguanosine complexed Pa-AGOG, 8-oxoguanine DNA glycosylase from Pyrobaculum aerophilum' _struct.pdbx_descriptor '8-oxoguanine DNA glycosylase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XQP _struct_keywords.pdbx_keywords LYASE _struct_keywords.text 'Helix-hairpin-Helix, 8-oxoguanine DNA glycosylase, Archaea, P.aerophilum, Pa-AGOG-8-oxoguanosine complex, DNA repair, LYASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The biologically active unit is a monomer.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 3 ? ARG A 15 ? ALA A 3 ARG A 15 1 ? 13 HELX_P HELX_P2 2 GLY A 18 ? ARG A 27 ? GLY A 18 ARG A 27 1 ? 10 HELX_P HELX_P3 3 ASP A 29 ? GLY A 43 ? ASP A 29 GLY A 43 1 ? 15 HELX_P HELX_P4 4 GLY A 43 ? ILE A 57 ? GLY A 43 ILE A 57 1 ? 15 HELX_P HELX_P5 5 LYS A 64 ? GLN A 78 ? LYS A 64 GLN A 78 1 ? 15 HELX_P HELX_P6 6 ASP A 83 ? SER A 95 ? ASP A 83 SER A 95 1 ? 13 HELX_P HELX_P7 7 GLY A 101 ? CYS A 113 ? GLY A 101 CYS A 113 1 ? 13 HELX_P HELX_P8 8 ASP A 121 ? GLY A 134 ? ASP A 121 GLY A 134 1 ? 14 HELX_P HELX_P9 9 GLN A 139 ? GLY A 158 ? GLN A 139 GLY A 158 1 ? 20 HELX_P HELX_P10 10 ASP A 172 ? ALA A 182 ? ASP A 172 ALA A 182 1 ? 11 HELX_P HELX_P11 11 PRO A 188 ? ARG A 195 ? PRO A 188 ARG A 195 1 ? 8 HELX_P HELX_P12 12 ARG A 195 ? GLY A 211 ? ARG A 195 GLY A 211 1 ? 17 HELX_P HELX_P13 13 PRO A 213 ? GLY A 231 ? PRO A 213 GLY A 231 1 ? 19 HELX_P HELX_P14 14 PRO A 238 ? PHE A 245 ? PRO A 238 PHE A 245 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 155 SG ? ? A CYS 36 A CYS 155 1_555 ? ? ? ? ? ? ? 2.048 ? disulf2 disulf ? ? A CYS 85 SG ? ? ? 1_555 A CYS 113 SG ? ? A CYS 85 A CYS 113 1_555 ? ? ? ? ? ? ? 2.041 ? disulf3 disulf ? ? A CYS 181 SG ? ? ? 1_555 A CYS 251 SG ? ? A CYS 181 A CYS 251 1_555 ? ? ? ? ? ? ? 2.040 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE 8HG A 257' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE 8HG A 258' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 GLN A 31 ? GLN A 31 . ? 1_555 ? 2 AC1 11 SER A 58 ? SER A 58 . ? 1_555 ? 3 AC1 11 TYR A 59 ? TYR A 59 . ? 1_555 ? 4 AC1 11 TRP A 69 ? TRP A 69 . ? 1_555 ? 5 AC1 11 LYS A 140 ? LYS A 140 . ? 1_555 ? 6 AC1 11 PHE A 144 ? PHE A 144 . ? 1_555 ? 7 AC1 11 PRO A 170 ? PRO A 170 . ? 1_555 ? 8 AC1 11 ASP A 172 ? ASP A 172 . ? 1_555 ? 9 AC1 11 ASP A 218 ? ASP A 218 . ? 1_555 ? 10 AC1 11 TRP A 222 ? TRP A 222 . ? 1_555 ? 11 AC1 11 HOH D . ? HOH A 272 . ? 1_555 ? 12 AC2 9 CYS A 85 ? CYS A 85 . ? 2_565 ? 13 AC2 9 CYS A 85 ? CYS A 85 . ? 1_555 ? 14 AC2 9 ARG A 86 ? ARG A 86 . ? 1_555 ? 15 AC2 9 LEU A 89 ? LEU A 89 . ? 2_565 ? 16 AC2 9 LYS A 106 ? LYS A 106 . ? 1_555 ? 17 AC2 9 LEU A 110 ? LEU A 110 . ? 2_565 ? 18 AC2 9 HOH D . ? HOH A 300 . ? 1_555 ? 19 AC2 9 HOH D . ? HOH A 485 . ? 2_565 ? 20 AC2 9 HOH D . ? HOH A 485 . ? 1_555 ? # _database_PDB_matrix.entry_id 1XQP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XQP _atom_sites.fract_transf_matrix[1][1] 0.013847 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010193 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027647 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 HIS 42 42 42 HIS HIS A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 MET 52 52 52 MET MET A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 TRP 69 69 69 TRP TRP A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 CYS 85 85 85 CYS CYS A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 CYS 113 113 113 CYS CYS A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 HIS 131 131 131 HIS HIS A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 THR 145 145 145 THR THR A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 TYR 153 153 153 TYR TYR A . n A 1 154 MET 154 154 154 MET MET A . n A 1 155 CYS 155 155 155 CYS CYS A . n A 1 156 SER 156 156 156 SER SER A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 TRP 180 180 180 TRP TRP A . n A 1 181 CYS 181 181 181 CYS CYS A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 ASP 186 186 186 ASP ASP A . n A 1 187 PHE 187 187 187 PHE PHE A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 ARG 195 195 195 ARG ARG A . n A 1 196 TYR 196 196 196 TYR TYR A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 GLN 200 200 200 GLN GLN A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 TRP 203 203 203 TRP TRP A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 THR 210 210 210 THR THR A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 PRO 214 214 214 PRO PRO A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 HIS 216 216 216 HIS HIS A . n A 1 217 LEU 217 217 217 LEU LEU A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 TRP 222 222 222 TRP TRP A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 ARG 226 226 226 ARG ARG A . n A 1 227 ALA 227 227 227 ALA ALA A . n A 1 228 VAL 228 228 228 VAL VAL A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 TYR 230 230 230 TYR TYR A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 ASN 233 233 233 ASN ASN A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 HIS 235 235 235 HIS HIS A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 VAL 237 237 237 VAL VAL A . n A 1 238 PRO 238 238 238 PRO PRO A . n A 1 239 LYS 239 239 239 LYS LYS A . n A 1 240 GLU 240 240 240 GLU GLU A . n A 1 241 VAL 241 241 241 VAL VAL A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 ALA 243 243 243 ALA ALA A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 PHE 245 245 245 PHE PHE A . n A 1 246 GLN 246 246 246 GLN GLN A . n A 1 247 TRP 247 247 247 TRP TRP A . n A 1 248 ARG 248 248 248 ARG ARG A . n A 1 249 GLY 249 249 249 GLY GLY A . n A 1 250 GLY 250 250 250 GLY GLY A . n A 1 251 CYS 251 251 251 CYS CYS A . n A 1 252 ARG 252 252 252 ARG ARG A . n A 1 253 PRO 253 253 253 PRO PRO A . n A 1 254 PRO 254 254 254 PRO PRO A . n A 1 255 SER 255 255 ? ? ? A . n A 1 256 GLU 256 256 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8HG 1 257 255 8HG 8HG A . C 2 8HG 1 258 256 8HG 8HG A . D 3 HOH 1 259 257 HOH HOH A . D 3 HOH 2 260 258 HOH HOH A . D 3 HOH 3 261 259 HOH HOH A . D 3 HOH 4 262 260 HOH HOH A . D 3 HOH 5 263 261 HOH HOH A . D 3 HOH 6 264 262 HOH HOH A . D 3 HOH 7 265 263 HOH HOH A . D 3 HOH 8 266 264 HOH HOH A . D 3 HOH 9 267 265 HOH HOH A . D 3 HOH 10 268 266 HOH HOH A . D 3 HOH 11 269 267 HOH HOH A . D 3 HOH 12 270 268 HOH HOH A . D 3 HOH 13 271 269 HOH HOH A . D 3 HOH 14 272 270 HOH HOH A . D 3 HOH 15 273 271 HOH HOH A . D 3 HOH 16 274 272 HOH HOH A . D 3 HOH 17 275 273 HOH HOH A . D 3 HOH 18 276 274 HOH HOH A . D 3 HOH 19 277 275 HOH HOH A . D 3 HOH 20 278 276 HOH HOH A . D 3 HOH 21 279 277 HOH HOH A . D 3 HOH 22 280 278 HOH HOH A . D 3 HOH 23 281 279 HOH HOH A . D 3 HOH 24 282 280 HOH HOH A . D 3 HOH 25 283 281 HOH HOH A . D 3 HOH 26 284 282 HOH HOH A . D 3 HOH 27 285 283 HOH HOH A . D 3 HOH 28 286 284 HOH HOH A . D 3 HOH 29 287 285 HOH HOH A . D 3 HOH 30 288 286 HOH HOH A . D 3 HOH 31 289 287 HOH HOH A . D 3 HOH 32 290 288 HOH HOH A . D 3 HOH 33 291 289 HOH HOH A . D 3 HOH 34 292 290 HOH HOH A . D 3 HOH 35 293 291 HOH HOH A . D 3 HOH 36 294 292 HOH HOH A . D 3 HOH 37 295 293 HOH HOH A . D 3 HOH 38 296 294 HOH HOH A . D 3 HOH 39 297 296 HOH HOH A . D 3 HOH 40 298 297 HOH HOH A . D 3 HOH 41 299 298 HOH HOH A . D 3 HOH 42 300 299 HOH HOH A . D 3 HOH 43 301 300 HOH HOH A . D 3 HOH 44 302 301 HOH HOH A . D 3 HOH 45 303 302 HOH HOH A . D 3 HOH 46 304 303 HOH HOH A . D 3 HOH 47 305 304 HOH HOH A . D 3 HOH 48 306 305 HOH HOH A . D 3 HOH 49 307 306 HOH HOH A . D 3 HOH 50 308 307 HOH HOH A . D 3 HOH 51 309 308 HOH HOH A . D 3 HOH 52 310 309 HOH HOH A . D 3 HOH 53 311 310 HOH HOH A . D 3 HOH 54 312 311 HOH HOH A . D 3 HOH 55 313 312 HOH HOH A . D 3 HOH 56 314 313 HOH HOH A . D 3 HOH 57 315 314 HOH HOH A . D 3 HOH 58 316 315 HOH HOH A . D 3 HOH 59 317 316 HOH HOH A . D 3 HOH 60 318 317 HOH HOH A . D 3 HOH 61 319 318 HOH HOH A . D 3 HOH 62 320 319 HOH HOH A . D 3 HOH 63 321 320 HOH HOH A . D 3 HOH 64 322 321 HOH HOH A . D 3 HOH 65 323 322 HOH HOH A . D 3 HOH 66 324 323 HOH HOH A . D 3 HOH 67 325 324 HOH HOH A . D 3 HOH 68 326 325 HOH HOH A . D 3 HOH 69 327 326 HOH HOH A . D 3 HOH 70 328 327 HOH HOH A . D 3 HOH 71 329 328 HOH HOH A . D 3 HOH 72 330 329 HOH HOH A . D 3 HOH 73 331 330 HOH HOH A . D 3 HOH 74 332 331 HOH HOH A . D 3 HOH 75 333 332 HOH HOH A . D 3 HOH 76 334 333 HOH HOH A . D 3 HOH 77 335 334 HOH HOH A . D 3 HOH 78 336 335 HOH HOH A . D 3 HOH 79 337 336 HOH HOH A . D 3 HOH 80 338 337 HOH HOH A . D 3 HOH 81 339 338 HOH HOH A . D 3 HOH 82 340 339 HOH HOH A . D 3 HOH 83 341 340 HOH HOH A . D 3 HOH 84 342 341 HOH HOH A . D 3 HOH 85 343 342 HOH HOH A . D 3 HOH 86 344 343 HOH HOH A . D 3 HOH 87 345 344 HOH HOH A . D 3 HOH 88 346 345 HOH HOH A . D 3 HOH 89 347 346 HOH HOH A . D 3 HOH 90 348 347 HOH HOH A . D 3 HOH 91 349 348 HOH HOH A . D 3 HOH 92 350 349 HOH HOH A . D 3 HOH 93 351 350 HOH HOH A . D 3 HOH 94 352 351 HOH HOH A . D 3 HOH 95 353 352 HOH HOH A . D 3 HOH 96 354 353 HOH HOH A . D 3 HOH 97 355 354 HOH HOH A . D 3 HOH 98 356 355 HOH HOH A . D 3 HOH 99 357 356 HOH HOH A . D 3 HOH 100 358 358 HOH HOH A . D 3 HOH 101 359 359 HOH HOH A . D 3 HOH 102 360 360 HOH HOH A . D 3 HOH 103 361 361 HOH HOH A . D 3 HOH 104 362 362 HOH HOH A . D 3 HOH 105 363 363 HOH HOH A . D 3 HOH 106 364 364 HOH HOH A . D 3 HOH 107 365 365 HOH HOH A . D 3 HOH 108 366 366 HOH HOH A . D 3 HOH 109 367 368 HOH HOH A . D 3 HOH 110 368 369 HOH HOH A . D 3 HOH 111 369 370 HOH HOH A . D 3 HOH 112 370 371 HOH HOH A . D 3 HOH 113 371 372 HOH HOH A . D 3 HOH 114 372 373 HOH HOH A . D 3 HOH 115 373 374 HOH HOH A . D 3 HOH 116 374 375 HOH HOH A . D 3 HOH 117 375 376 HOH HOH A . D 3 HOH 118 376 377 HOH HOH A . D 3 HOH 119 377 378 HOH HOH A . D 3 HOH 120 378 379 HOH HOH A . D 3 HOH 121 379 380 HOH HOH A . D 3 HOH 122 380 381 HOH HOH A . D 3 HOH 123 381 382 HOH HOH A . D 3 HOH 124 382 383 HOH HOH A . D 3 HOH 125 383 384 HOH HOH A . D 3 HOH 126 384 385 HOH HOH A . D 3 HOH 127 385 386 HOH HOH A . D 3 HOH 128 386 387 HOH HOH A . D 3 HOH 129 387 388 HOH HOH A . D 3 HOH 130 388 389 HOH HOH A . D 3 HOH 131 389 390 HOH HOH A . D 3 HOH 132 390 391 HOH HOH A . D 3 HOH 133 391 392 HOH HOH A . D 3 HOH 134 392 393 HOH HOH A . D 3 HOH 135 393 394 HOH HOH A . D 3 HOH 136 394 395 HOH HOH A . D 3 HOH 137 395 396 HOH HOH A . D 3 HOH 138 396 397 HOH HOH A . D 3 HOH 139 397 398 HOH HOH A . D 3 HOH 140 398 399 HOH HOH A . D 3 HOH 141 399 400 HOH HOH A . D 3 HOH 142 400 401 HOH HOH A . D 3 HOH 143 401 402 HOH HOH A . D 3 HOH 144 402 403 HOH HOH A . D 3 HOH 145 403 404 HOH HOH A . D 3 HOH 146 404 405 HOH HOH A . D 3 HOH 147 405 406 HOH HOH A . D 3 HOH 148 406 407 HOH HOH A . D 3 HOH 149 407 408 HOH HOH A . D 3 HOH 150 408 409 HOH HOH A . D 3 HOH 151 409 410 HOH HOH A . D 3 HOH 152 410 411 HOH HOH A . D 3 HOH 153 411 412 HOH HOH A . D 3 HOH 154 412 413 HOH HOH A . D 3 HOH 155 413 414 HOH HOH A . D 3 HOH 156 414 415 HOH HOH A . D 3 HOH 157 415 416 HOH HOH A . D 3 HOH 158 416 417 HOH HOH A . D 3 HOH 159 417 418 HOH HOH A . D 3 HOH 160 418 419 HOH HOH A . D 3 HOH 161 419 420 HOH HOH A . D 3 HOH 162 420 421 HOH HOH A . D 3 HOH 163 421 422 HOH HOH A . D 3 HOH 164 422 423 HOH HOH A . D 3 HOH 165 423 424 HOH HOH A . D 3 HOH 166 424 425 HOH HOH A . D 3 HOH 167 425 426 HOH HOH A . D 3 HOH 168 426 427 HOH HOH A . D 3 HOH 169 427 428 HOH HOH A . D 3 HOH 170 428 429 HOH HOH A . D 3 HOH 171 429 430 HOH HOH A . D 3 HOH 172 430 431 HOH HOH A . D 3 HOH 173 431 432 HOH HOH A . D 3 HOH 174 432 433 HOH HOH A . D 3 HOH 175 433 434 HOH HOH A . D 3 HOH 176 434 435 HOH HOH A . D 3 HOH 177 435 436 HOH HOH A . D 3 HOH 178 436 437 HOH HOH A . D 3 HOH 179 437 438 HOH HOH A . D 3 HOH 180 438 439 HOH HOH A . D 3 HOH 181 439 440 HOH HOH A . D 3 HOH 182 440 441 HOH HOH A . D 3 HOH 183 441 442 HOH HOH A . D 3 HOH 184 442 443 HOH HOH A . D 3 HOH 185 443 444 HOH HOH A . D 3 HOH 186 444 445 HOH HOH A . D 3 HOH 187 445 446 HOH HOH A . D 3 HOH 188 446 447 HOH HOH A . D 3 HOH 189 447 448 HOH HOH A . D 3 HOH 190 448 449 HOH HOH A . D 3 HOH 191 449 450 HOH HOH A . D 3 HOH 192 450 451 HOH HOH A . D 3 HOH 193 451 452 HOH HOH A . D 3 HOH 194 452 453 HOH HOH A . D 3 HOH 195 453 454 HOH HOH A . D 3 HOH 196 454 455 HOH HOH A . D 3 HOH 197 455 456 HOH HOH A . D 3 HOH 198 456 457 HOH HOH A . D 3 HOH 199 457 458 HOH HOH A . D 3 HOH 200 458 459 HOH HOH A . D 3 HOH 201 459 460 HOH HOH A . D 3 HOH 202 460 461 HOH HOH A . D 3 HOH 203 461 462 HOH HOH A . D 3 HOH 204 462 463 HOH HOH A . D 3 HOH 205 463 464 HOH HOH A . D 3 HOH 206 464 465 HOH HOH A . D 3 HOH 207 465 466 HOH HOH A . D 3 HOH 208 466 467 HOH HOH A . D 3 HOH 209 467 468 HOH HOH A . D 3 HOH 210 468 469 HOH HOH A . D 3 HOH 211 469 470 HOH HOH A . D 3 HOH 212 470 471 HOH HOH A . D 3 HOH 213 471 472 HOH HOH A . D 3 HOH 214 472 473 HOH HOH A . D 3 HOH 215 473 474 HOH HOH A . D 3 HOH 216 474 475 HOH HOH A . D 3 HOH 217 475 476 HOH HOH A . D 3 HOH 218 476 479 HOH HOH A . D 3 HOH 219 477 480 HOH HOH A . D 3 HOH 220 478 481 HOH HOH A . D 3 HOH 221 479 482 HOH HOH A . D 3 HOH 222 480 483 HOH HOH A . D 3 HOH 223 481 484 HOH HOH A . D 3 HOH 224 482 485 HOH HOH A . D 3 HOH 225 483 486 HOH HOH A . D 3 HOH 226 484 487 HOH HOH A . D 3 HOH 227 485 488 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id 8HG _pdbx_struct_special_symmetry.auth_seq_id 258 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id 8HG _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-16 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2014-04-16 5 'Structure model' 1 4 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Experimental preparation' 4 5 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 5 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.9999 ? 1 MAR345 'data collection' . ? 2 XDS 'data scaling' . ? 3 PHASES phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 249 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 476 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.97 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LEU 17 ? ? CG A LEU 17 ? ? CD1 A LEU 17 ? B 122.83 111.00 11.83 1.70 N 2 1 CB A ASP 29 ? ? CG A ASP 29 ? ? OD1 A ASP 29 ? ? 123.93 118.30 5.63 0.90 N 3 1 CB A ASP 83 ? ? CG A ASP 83 ? ? OD2 A ASP 83 ? ? 125.58 118.30 7.28 0.90 N 4 1 N A GLY 249 ? ? CA A GLY 249 ? ? C A GLY 249 ? B 130.46 113.10 17.36 2.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 195 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -86.18 _pdbx_validate_torsion.psi 45.03 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A SER 255 ? A SER 255 4 1 Y 1 A GLU 256 ? A GLU 256 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "2'-DEOXY-8-OXOGUANOSINE" 8HG 3 water HOH #