data_1XSV # _entry.id 1XSV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1XSV RCSB RCSB030728 WWPDB D_1000030728 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XSV _pdbx_database_status.recvd_initial_deposition_date 2004-10-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Walker, J.R.' 1 'Xu, X.' 2 'Virag, C.' 3 'McDonald, M.-L.' 4 'Houston, S.' 5 'Buzadzija, K.' 6 'Vedadi, M.' 7 'Dharamsi, A.' 8 'Fiebig, K.M.' 9 'Savchenko, A.' 10 # _citation.id primary _citation.title '1.7 Angstrom Crystal Structure of Conserved Hypothetical UPF0122 Protein SAV1236 From Staphylococcus aureus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Walker, J.R.' 1 primary 'Xu, X.' 2 primary 'Virag, C.' 3 primary 'McDonald, M.-L.' 4 primary 'Houston, S.' 5 primary 'Buzadzija, K.' 6 primary 'Vedadi, M.' 7 primary 'Dharamsi, A.' 8 primary 'Fiebig, K.M.' 9 primary 'Savchenko, A.' 10 # _cell.entry_id 1XSV _cell.length_a 37.096 _cell.length_b 67.784 _cell.length_c 87.978 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XSV _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical UPF0122 protein SAV1236' 13972.197 2 ? ? ? ? 2 water nat water 18.015 272 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSHMGQNDLVKTLR(MSE)NYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKL ELYQKFEQRREIYDE(MSE)KQHLSNPEQIQRYIQQLEDLE ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQ KFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 GLN n 1 7 ASN n 1 8 ASP n 1 9 LEU n 1 10 VAL n 1 11 LYS n 1 12 THR n 1 13 LEU n 1 14 ARG n 1 15 MSE n 1 16 ASN n 1 17 TYR n 1 18 LEU n 1 19 PHE n 1 20 ASP n 1 21 PHE n 1 22 TYR n 1 23 GLN n 1 24 SER n 1 25 LEU n 1 26 LEU n 1 27 THR n 1 28 ASN n 1 29 LYS n 1 30 GLN n 1 31 ARG n 1 32 ASN n 1 33 TYR n 1 34 LEU n 1 35 GLU n 1 36 LEU n 1 37 PHE n 1 38 TYR n 1 39 LEU n 1 40 GLU n 1 41 ASP n 1 42 TYR n 1 43 SER n 1 44 LEU n 1 45 SER n 1 46 GLU n 1 47 ILE n 1 48 ALA n 1 49 ASP n 1 50 THR n 1 51 PHE n 1 52 ASN n 1 53 VAL n 1 54 SER n 1 55 ARG n 1 56 GLN n 1 57 ALA n 1 58 VAL n 1 59 TYR n 1 60 ASP n 1 61 ASN n 1 62 ILE n 1 63 ARG n 1 64 ARG n 1 65 THR n 1 66 GLY n 1 67 ASP n 1 68 LEU n 1 69 VAL n 1 70 GLU n 1 71 ASP n 1 72 TYR n 1 73 GLU n 1 74 LYS n 1 75 LYS n 1 76 LEU n 1 77 GLU n 1 78 LEU n 1 79 TYR n 1 80 GLN n 1 81 LYS n 1 82 PHE n 1 83 GLU n 1 84 GLN n 1 85 ARG n 1 86 ARG n 1 87 GLU n 1 88 ILE n 1 89 TYR n 1 90 ASP n 1 91 GLU n 1 92 MSE n 1 93 LYS n 1 94 GLN n 1 95 HIS n 1 96 LEU n 1 97 SER n 1 98 ASN n 1 99 PRO n 1 100 GLU n 1 101 GLN n 1 102 ILE n 1 103 GLN n 1 104 ARG n 1 105 TYR n 1 106 ILE n 1 107 GLN n 1 108 GLN n 1 109 LEU n 1 110 GLU n 1 111 ASP n 1 112 LEU n 1 113 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene SAV1236 _entity_src_gen.gene_src_species 'Staphylococcus aureus' _entity_src_gen.gene_src_strain 'subsp. aureus' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus subsp. aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 46170 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 700699 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pPW2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y1236_STAAM _struct_ref.pdbx_db_accession P67248 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFE QRREIYDEMKQHLSNPEQIQRYIQQLEDLE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1XSV A 4 ? 113 ? P67248 1 ? 110 ? 1 110 2 1 1XSV B 4 ? 113 ? P67248 1 ? 110 ? 1 110 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1XSV GLY A 1 ? UNP P67248 ? ? 'CLONING ARTIFACT' -2 1 1 1XSV SER A 2 ? UNP P67248 ? ? 'CLONING ARTIFACT' -1 2 1 1XSV HIS A 3 ? UNP P67248 ? ? 'CLONING ARTIFACT' 0 3 1 1XSV MSE A 15 ? UNP P67248 MET 12 'MODIFIED RESIDUE' 12 4 1 1XSV MSE A 92 ? UNP P67248 MET 89 'MODIFIED RESIDUE' 89 5 2 1XSV GLY B 1 ? UNP P67248 ? ? 'CLONING ARTIFACT' -2 6 2 1XSV SER B 2 ? UNP P67248 ? ? 'CLONING ARTIFACT' -1 7 2 1XSV HIS B 3 ? UNP P67248 ? ? 'CLONING ARTIFACT' 0 8 2 1XSV MSE B 15 ? UNP P67248 MET 12 'MODIFIED RESIDUE' 12 9 2 1XSV MSE B 92 ? UNP P67248 MET 89 'MODIFIED RESIDUE' 89 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1XSV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.8 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '0.1M Sodium Acetate, 2.0M Ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2004-08-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97936 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97936 # _reflns.entry_id 1XSV _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 32 _reflns.d_resolution_high 1.7 _reflns.number_obs 24963 _reflns.number_all 24963 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 19.0 _reflns.pdbx_redundancy 5.68 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.78 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.23 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 5.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1XSV _refine.ls_number_reflns_obs 24963 _refine.ls_number_reflns_all 24963 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1237412.10 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.54 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs 0.187 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.187 _refine.ls_R_factor_R_free 0.224 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1241 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 21.1 _refine.aniso_B[1][1] -0.40 _refine.aniso_B[2][2] -4.47 _refine.aniso_B[3][3] 4.87 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.409932 _refine.solvent_model_param_bsol 52.5857 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1XSV _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.03 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.21 _refine_analyze.Luzzati_sigma_a_free 0.11 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1858 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 272 _refine_hist.number_atoms_total 2130 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 32.54 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.3 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.81 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.42 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.07 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.81 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.32 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.number_reflns_R_work 3893 _refine_ls_shell.R_factor_R_work 0.183 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.231 _refine_ls_shell.R_factor_R_free_error 0.017 _refine_ls_shell.percent_reflns_R_free 4.4 _refine_ls_shell.number_reflns_R_free 180 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1XSV _struct.title 'X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from Staphylococcus aureus subsp. aureus Mu50' _struct.pdbx_descriptor 'Hypothetical UPF0122 protein SAV1236' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XSV _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'helix-turn-helix, putative DNA-binding protein, signal recognition particle, UPF0122, unknown function' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a dimer, consisting of Chains A and B.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 8 ? GLN A 23 ? ASP A 5 GLN A 20 1 ? 16 HELX_P HELX_P2 2 SER A 24 ? LEU A 26 ? SER A 21 LEU A 23 5 ? 3 HELX_P HELX_P3 3 THR A 27 ? LEU A 39 ? THR A 24 LEU A 36 1 ? 13 HELX_P HELX_P4 4 SER A 43 ? PHE A 51 ? SER A 40 PHE A 48 1 ? 9 HELX_P HELX_P5 5 SER A 54 ? GLU A 77 ? SER A 51 GLU A 74 1 ? 24 HELX_P HELX_P6 6 GLU A 77 ? LYS A 93 ? GLU A 74 LYS A 90 1 ? 17 HELX_P HELX_P7 7 ASN A 98 ? GLU A 113 ? ASN A 95 GLU A 110 1 ? 16 HELX_P HELX_P8 8 THR B 12 ? GLN B 23 ? THR B 9 GLN B 20 1 ? 12 HELX_P HELX_P9 9 SER B 24 ? LEU B 26 ? SER B 21 LEU B 23 5 ? 3 HELX_P HELX_P10 10 THR B 27 ? TYR B 38 ? THR B 24 TYR B 35 1 ? 12 HELX_P HELX_P11 11 SER B 43 ? ASN B 52 ? SER B 40 ASN B 49 1 ? 10 HELX_P HELX_P12 12 SER B 54 ? GLU B 77 ? SER B 51 GLU B 74 1 ? 24 HELX_P HELX_P13 13 GLU B 77 ? LYS B 93 ? GLU B 74 LYS B 90 1 ? 17 HELX_P HELX_P14 14 ASN B 98 ? LEU B 112 ? ASN B 95 LEU B 109 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 14 C ? ? ? 1_555 A MSE 15 N ? ? A ARG 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? A MSE 15 C ? ? ? 1_555 A ASN 16 N ? ? A MSE 12 A ASN 13 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A GLU 91 C ? ? ? 1_555 A MSE 92 N ? ? A GLU 88 A MSE 89 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 92 C ? ? ? 1_555 A LYS 93 N ? ? A MSE 89 A LYS 90 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale ? ? B ARG 14 C ? ? ? 1_555 B MSE 15 N ? ? B ARG 11 B MSE 12 1_555 ? ? ? ? ? ? ? 1.333 ? covale6 covale ? ? B MSE 15 C ? ? ? 1_555 B ASN 16 N ? ? B MSE 12 B ASN 13 1_555 ? ? ? ? ? ? ? 1.340 ? covale7 covale ? ? B GLU 91 C ? ? ? 1_555 B MSE 92 N ? ? B GLU 88 B MSE 89 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? B MSE 92 C ? ? ? 1_555 B LYS 93 N ? ? B MSE 89 B LYS 90 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1XSV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XSV _atom_sites.fract_transf_matrix[1][1] 0.026957 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014753 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011366 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLY 5 2 ? ? ? A . n A 1 6 GLN 6 3 ? ? ? A . n A 1 7 ASN 7 4 ? ? ? A . n A 1 8 ASP 8 5 5 ASP ASP A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 VAL 10 7 7 VAL VAL A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 THR 12 9 9 THR THR A . n A 1 13 LEU 13 10 10 LEU LEU A . n A 1 14 ARG 14 11 11 ARG ARG A . n A 1 15 MSE 15 12 12 MSE MSE A . n A 1 16 ASN 16 13 13 ASN ASN A . n A 1 17 TYR 17 14 14 TYR TYR A . n A 1 18 LEU 18 15 15 LEU LEU A . n A 1 19 PHE 19 16 16 PHE PHE A . n A 1 20 ASP 20 17 17 ASP ASP A . n A 1 21 PHE 21 18 18 PHE PHE A . n A 1 22 TYR 22 19 19 TYR TYR A . n A 1 23 GLN 23 20 20 GLN GLN A . n A 1 24 SER 24 21 21 SER SER A . n A 1 25 LEU 25 22 22 LEU LEU A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 THR 27 24 24 THR THR A . n A 1 28 ASN 28 25 25 ASN ASN A . n A 1 29 LYS 29 26 26 LYS LYS A . n A 1 30 GLN 30 27 27 GLN GLN A . n A 1 31 ARG 31 28 28 ARG ARG A . n A 1 32 ASN 32 29 29 ASN ASN A . n A 1 33 TYR 33 30 30 TYR TYR A . n A 1 34 LEU 34 31 31 LEU LEU A . n A 1 35 GLU 35 32 32 GLU GLU A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 PHE 37 34 34 PHE PHE A . n A 1 38 TYR 38 35 35 TYR TYR A . n A 1 39 LEU 39 36 36 LEU LEU A . n A 1 40 GLU 40 37 37 GLU GLU A . n A 1 41 ASP 41 38 38 ASP ASP A . n A 1 42 TYR 42 39 39 TYR TYR A . n A 1 43 SER 43 40 40 SER SER A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 SER 45 42 42 SER SER A . n A 1 46 GLU 46 43 43 GLU GLU A . n A 1 47 ILE 47 44 44 ILE ILE A . n A 1 48 ALA 48 45 45 ALA ALA A . n A 1 49 ASP 49 46 46 ASP ASP A . n A 1 50 THR 50 47 47 THR THR A . n A 1 51 PHE 51 48 48 PHE PHE A . n A 1 52 ASN 52 49 49 ASN ASN A . n A 1 53 VAL 53 50 50 VAL VAL A . n A 1 54 SER 54 51 51 SER SER A . n A 1 55 ARG 55 52 52 ARG ARG A . n A 1 56 GLN 56 53 53 GLN GLN A . n A 1 57 ALA 57 54 54 ALA ALA A . n A 1 58 VAL 58 55 55 VAL VAL A . n A 1 59 TYR 59 56 56 TYR TYR A . n A 1 60 ASP 60 57 57 ASP ASP A . n A 1 61 ASN 61 58 58 ASN ASN A . n A 1 62 ILE 62 59 59 ILE ILE A . n A 1 63 ARG 63 60 60 ARG ARG A . n A 1 64 ARG 64 61 61 ARG ARG A . n A 1 65 THR 65 62 62 THR THR A . n A 1 66 GLY 66 63 63 GLY GLY A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 LEU 68 65 65 LEU LEU A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 GLU 70 67 67 GLU GLU A . n A 1 71 ASP 71 68 68 ASP ASP A . n A 1 72 TYR 72 69 69 TYR TYR A . n A 1 73 GLU 73 70 70 GLU GLU A . n A 1 74 LYS 74 71 71 LYS LYS A . n A 1 75 LYS 75 72 72 LYS LYS A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 LEU 78 75 75 LEU LEU A . n A 1 79 TYR 79 76 76 TYR TYR A . n A 1 80 GLN 80 77 77 GLN GLN A . n A 1 81 LYS 81 78 78 LYS LYS A . n A 1 82 PHE 82 79 79 PHE PHE A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 GLN 84 81 81 GLN GLN A . n A 1 85 ARG 85 82 82 ARG ARG A . n A 1 86 ARG 86 83 83 ARG ARG A . n A 1 87 GLU 87 84 84 GLU GLU A . n A 1 88 ILE 88 85 85 ILE ILE A . n A 1 89 TYR 89 86 86 TYR TYR A . n A 1 90 ASP 90 87 87 ASP ASP A . n A 1 91 GLU 91 88 88 GLU GLU A . n A 1 92 MSE 92 89 89 MSE MSE A . n A 1 93 LYS 93 90 90 LYS LYS A . n A 1 94 GLN 94 91 91 GLN GLN A . n A 1 95 HIS 95 92 92 HIS HIS A . n A 1 96 LEU 96 93 93 LEU LEU A . n A 1 97 SER 97 94 94 SER SER A . n A 1 98 ASN 98 95 95 ASN ASN A . n A 1 99 PRO 99 96 96 PRO PRO A . n A 1 100 GLU 100 97 97 GLU GLU A . n A 1 101 GLN 101 98 98 GLN GLN A . n A 1 102 ILE 102 99 99 ILE ILE A . n A 1 103 GLN 103 100 100 GLN GLN A . n A 1 104 ARG 104 101 101 ARG ARG A . n A 1 105 TYR 105 102 102 TYR TYR A . n A 1 106 ILE 106 103 103 ILE ILE A . n A 1 107 GLN 107 104 104 GLN GLN A . n A 1 108 GLN 108 105 105 GLN GLN A . n A 1 109 LEU 109 106 106 LEU LEU A . n A 1 110 GLU 110 107 107 GLU GLU A . n A 1 111 ASP 111 108 108 ASP ASP A . n A 1 112 LEU 112 109 109 LEU LEU A . n A 1 113 GLU 113 110 110 GLU GLU A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLY 5 2 ? ? ? B . n B 1 6 GLN 6 3 ? ? ? B . n B 1 7 ASN 7 4 ? ? ? B . n B 1 8 ASP 8 5 5 ASP ASP B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 VAL 10 7 7 VAL VAL B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 THR 12 9 9 THR THR B . n B 1 13 LEU 13 10 10 LEU LEU B . n B 1 14 ARG 14 11 11 ARG ARG B . n B 1 15 MSE 15 12 12 MSE MSE B . n B 1 16 ASN 16 13 13 ASN ASN B . n B 1 17 TYR 17 14 14 TYR TYR B . n B 1 18 LEU 18 15 15 LEU LEU B . n B 1 19 PHE 19 16 16 PHE PHE B . n B 1 20 ASP 20 17 17 ASP ASP B . n B 1 21 PHE 21 18 18 PHE PHE B . n B 1 22 TYR 22 19 19 TYR TYR B . n B 1 23 GLN 23 20 20 GLN GLN B . n B 1 24 SER 24 21 21 SER SER B . n B 1 25 LEU 25 22 22 LEU LEU B . n B 1 26 LEU 26 23 23 LEU LEU B . n B 1 27 THR 27 24 24 THR THR B . n B 1 28 ASN 28 25 25 ASN ASN B . n B 1 29 LYS 29 26 26 LYS LYS B . n B 1 30 GLN 30 27 27 GLN GLN B . n B 1 31 ARG 31 28 28 ARG ARG B . n B 1 32 ASN 32 29 29 ASN ASN B . n B 1 33 TYR 33 30 30 TYR TYR B . n B 1 34 LEU 34 31 31 LEU LEU B . n B 1 35 GLU 35 32 32 GLU GLU B . n B 1 36 LEU 36 33 33 LEU LEU B . n B 1 37 PHE 37 34 34 PHE PHE B . n B 1 38 TYR 38 35 35 TYR TYR B . n B 1 39 LEU 39 36 36 LEU LEU B . n B 1 40 GLU 40 37 37 GLU GLU B . n B 1 41 ASP 41 38 38 ASP ASP B . n B 1 42 TYR 42 39 39 TYR TYR B . n B 1 43 SER 43 40 40 SER SER B . n B 1 44 LEU 44 41 41 LEU LEU B . n B 1 45 SER 45 42 42 SER SER B . n B 1 46 GLU 46 43 43 GLU GLU B . n B 1 47 ILE 47 44 44 ILE ILE B . n B 1 48 ALA 48 45 45 ALA ALA B . n B 1 49 ASP 49 46 46 ASP ASP B . n B 1 50 THR 50 47 47 THR THR B . n B 1 51 PHE 51 48 48 PHE PHE B . n B 1 52 ASN 52 49 49 ASN ASN B . n B 1 53 VAL 53 50 50 VAL VAL B . n B 1 54 SER 54 51 51 SER SER B . n B 1 55 ARG 55 52 52 ARG ARG B . n B 1 56 GLN 56 53 53 GLN GLN B . n B 1 57 ALA 57 54 54 ALA ALA B . n B 1 58 VAL 58 55 55 VAL VAL B . n B 1 59 TYR 59 56 56 TYR TYR B . n B 1 60 ASP 60 57 57 ASP ASP B . n B 1 61 ASN 61 58 58 ASN ASN B . n B 1 62 ILE 62 59 59 ILE ILE B . n B 1 63 ARG 63 60 60 ARG ARG B . n B 1 64 ARG 64 61 61 ARG ARG B . n B 1 65 THR 65 62 62 THR THR B . n B 1 66 GLY 66 63 63 GLY GLY B . n B 1 67 ASP 67 64 64 ASP ASP B . n B 1 68 LEU 68 65 65 LEU LEU B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 GLU 70 67 67 GLU GLU B . n B 1 71 ASP 71 68 68 ASP ASP B . n B 1 72 TYR 72 69 69 TYR TYR B . n B 1 73 GLU 73 70 70 GLU GLU B . n B 1 74 LYS 74 71 71 LYS LYS B . n B 1 75 LYS 75 72 72 LYS LYS B . n B 1 76 LEU 76 73 73 LEU LEU B . n B 1 77 GLU 77 74 74 GLU GLU B . n B 1 78 LEU 78 75 75 LEU LEU B . n B 1 79 TYR 79 76 76 TYR TYR B . n B 1 80 GLN 80 77 77 GLN GLN B . n B 1 81 LYS 81 78 78 LYS LYS B . n B 1 82 PHE 82 79 79 PHE PHE B . n B 1 83 GLU 83 80 80 GLU GLU B . n B 1 84 GLN 84 81 81 GLN GLN B . n B 1 85 ARG 85 82 82 ARG ARG B . n B 1 86 ARG 86 83 83 ARG ARG B . n B 1 87 GLU 87 84 84 GLU GLU B . n B 1 88 ILE 88 85 85 ILE ILE B . n B 1 89 TYR 89 86 86 TYR TYR B . n B 1 90 ASP 90 87 87 ASP ASP B . n B 1 91 GLU 91 88 88 GLU GLU B . n B 1 92 MSE 92 89 89 MSE MSE B . n B 1 93 LYS 93 90 90 LYS LYS B . n B 1 94 GLN 94 91 91 GLN GLN B . n B 1 95 HIS 95 92 92 HIS HIS B . n B 1 96 LEU 96 93 93 LEU LEU B . n B 1 97 SER 97 94 94 SER SER B . n B 1 98 ASN 98 95 95 ASN ASN B . n B 1 99 PRO 99 96 96 PRO PRO B . n B 1 100 GLU 100 97 97 GLU GLU B . n B 1 101 GLN 101 98 98 GLN GLN B . n B 1 102 ILE 102 99 99 ILE ILE B . n B 1 103 GLN 103 100 100 GLN GLN B . n B 1 104 ARG 104 101 101 ARG ARG B . n B 1 105 TYR 105 102 102 TYR TYR B . n B 1 106 ILE 106 103 103 ILE ILE B . n B 1 107 GLN 107 104 104 GLN GLN B . n B 1 108 GLN 108 105 105 GLN GLN B . n B 1 109 LEU 109 106 106 LEU LEU B . n B 1 110 GLU 110 107 107 GLU GLU B . n B 1 111 ASP 111 108 108 ASP ASP B . n B 1 112 LEU 112 109 109 LEU LEU B . n B 1 113 GLU 113 110 110 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 111 1 HOH TIP A . C 2 HOH 2 112 3 HOH TIP A . C 2 HOH 3 113 6 HOH TIP A . C 2 HOH 4 114 8 HOH TIP A . C 2 HOH 5 115 9 HOH TIP A . C 2 HOH 6 116 11 HOH TIP A . C 2 HOH 7 117 12 HOH TIP A . C 2 HOH 8 118 13 HOH TIP A . C 2 HOH 9 119 14 HOH TIP A . C 2 HOH 10 120 15 HOH TIP A . C 2 HOH 11 121 17 HOH TIP A . C 2 HOH 12 122 18 HOH TIP A . C 2 HOH 13 123 20 HOH TIP A . C 2 HOH 14 124 21 HOH TIP A . C 2 HOH 15 125 22 HOH TIP A . C 2 HOH 16 126 23 HOH TIP A . C 2 HOH 17 127 24 HOH TIP A . C 2 HOH 18 128 25 HOH TIP A . C 2 HOH 19 129 27 HOH TIP A . C 2 HOH 20 130 29 HOH TIP A . C 2 HOH 21 131 32 HOH TIP A . C 2 HOH 22 132 33 HOH TIP A . C 2 HOH 23 133 40 HOH TIP A . C 2 HOH 24 134 42 HOH TIP A . C 2 HOH 25 135 44 HOH TIP A . C 2 HOH 26 136 45 HOH TIP A . C 2 HOH 27 137 48 HOH TIP A . C 2 HOH 28 138 50 HOH TIP A . C 2 HOH 29 139 51 HOH TIP A . C 2 HOH 30 140 52 HOH TIP A . C 2 HOH 31 141 56 HOH TIP A . C 2 HOH 32 142 57 HOH TIP A . C 2 HOH 33 143 60 HOH TIP A . C 2 HOH 34 144 61 HOH TIP A . C 2 HOH 35 145 63 HOH TIP A . C 2 HOH 36 146 68 HOH TIP A . C 2 HOH 37 147 70 HOH TIP A . C 2 HOH 38 148 71 HOH TIP A . C 2 HOH 39 149 73 HOH TIP A . C 2 HOH 40 150 74 HOH TIP A . C 2 HOH 41 151 76 HOH TIP A . C 2 HOH 42 152 77 HOH TIP A . C 2 HOH 43 153 78 HOH TIP A . C 2 HOH 44 154 81 HOH TIP A . C 2 HOH 45 155 82 HOH TIP A . C 2 HOH 46 156 83 HOH TIP A . C 2 HOH 47 157 85 HOH TIP A . C 2 HOH 48 158 86 HOH TIP A . C 2 HOH 49 159 87 HOH TIP A . C 2 HOH 50 160 92 HOH TIP A . C 2 HOH 51 161 99 HOH TIP A . C 2 HOH 52 162 105 HOH TIP A . C 2 HOH 53 163 109 HOH TIP A . C 2 HOH 54 164 113 HOH TIP A . C 2 HOH 55 165 114 HOH TIP A . C 2 HOH 56 166 115 HOH TIP A . C 2 HOH 57 167 119 HOH TIP A . C 2 HOH 58 168 121 HOH TIP A . C 2 HOH 59 169 128 HOH TIP A . C 2 HOH 60 170 133 HOH TIP A . C 2 HOH 61 171 135 HOH TIP A . C 2 HOH 62 172 136 HOH TIP A . C 2 HOH 63 173 145 HOH TIP A . C 2 HOH 64 174 146 HOH TIP A . C 2 HOH 65 175 148 HOH TIP A . C 2 HOH 66 176 149 HOH TIP A . C 2 HOH 67 177 150 HOH TIP A . C 2 HOH 68 178 153 HOH TIP A . C 2 HOH 69 179 154 HOH TIP A . C 2 HOH 70 180 155 HOH TIP A . C 2 HOH 71 181 157 HOH TIP A . C 2 HOH 72 182 158 HOH TIP A . C 2 HOH 73 183 162 HOH TIP A . C 2 HOH 74 184 163 HOH TIP A . C 2 HOH 75 185 165 HOH TIP A . C 2 HOH 76 186 166 HOH TIP A . C 2 HOH 77 187 167 HOH TIP A . C 2 HOH 78 188 169 HOH TIP A . C 2 HOH 79 189 173 HOH TIP A . C 2 HOH 80 190 174 HOH TIP A . C 2 HOH 81 191 177 HOH TIP A . C 2 HOH 82 192 178 HOH TIP A . C 2 HOH 83 193 187 HOH TIP A . C 2 HOH 84 194 190 HOH TIP A . C 2 HOH 85 195 191 HOH TIP A . C 2 HOH 86 196 196 HOH TIP A . C 2 HOH 87 197 197 HOH TIP A . C 2 HOH 88 198 198 HOH TIP A . C 2 HOH 89 199 199 HOH TIP A . C 2 HOH 90 200 201 HOH TIP A . C 2 HOH 91 201 203 HOH TIP A . C 2 HOH 92 202 206 HOH TIP A . C 2 HOH 93 203 208 HOH TIP A . C 2 HOH 94 204 211 HOH TIP A . C 2 HOH 95 205 212 HOH TIP A . C 2 HOH 96 206 216 HOH TIP A . C 2 HOH 97 207 225 HOH TIP A . C 2 HOH 98 208 227 HOH TIP A . C 2 HOH 99 209 229 HOH TIP A . C 2 HOH 100 210 230 HOH TIP A . C 2 HOH 101 211 231 HOH TIP A . C 2 HOH 102 212 232 HOH TIP A . C 2 HOH 103 213 235 HOH TIP A . C 2 HOH 104 214 237 HOH TIP A . C 2 HOH 105 215 240 HOH TIP A . C 2 HOH 106 216 244 HOH TIP A . C 2 HOH 107 217 246 HOH TIP A . C 2 HOH 108 218 247 HOH TIP A . C 2 HOH 109 219 255 HOH TIP A . C 2 HOH 110 220 257 HOH TIP A . C 2 HOH 111 221 259 HOH TIP A . C 2 HOH 112 222 262 HOH TIP A . C 2 HOH 113 223 263 HOH TIP A . C 2 HOH 114 224 265 HOH TIP A . C 2 HOH 115 225 271 HOH TIP A . C 2 HOH 116 226 272 HOH TIP A . C 2 HOH 117 227 275 HOH TIP A . C 2 HOH 118 228 280 HOH TIP A . C 2 HOH 119 229 281 HOH TIP A . C 2 HOH 120 230 283 HOH TIP A . C 2 HOH 121 231 288 HOH TIP A . C 2 HOH 122 232 292 HOH TIP A . C 2 HOH 123 233 294 HOH TIP A . C 2 HOH 124 234 295 HOH TIP A . D 2 HOH 1 111 2 HOH TIP B . D 2 HOH 2 112 4 HOH TIP B . D 2 HOH 3 113 5 HOH TIP B . D 2 HOH 4 114 7 HOH TIP B . D 2 HOH 5 115 10 HOH TIP B . D 2 HOH 6 116 16 HOH TIP B . D 2 HOH 7 117 19 HOH TIP B . D 2 HOH 8 118 26 HOH TIP B . D 2 HOH 9 119 28 HOH TIP B . D 2 HOH 10 120 30 HOH TIP B . D 2 HOH 11 121 31 HOH TIP B . D 2 HOH 12 122 34 HOH TIP B . D 2 HOH 13 123 35 HOH TIP B . D 2 HOH 14 124 36 HOH TIP B . D 2 HOH 15 125 37 HOH TIP B . D 2 HOH 16 126 38 HOH TIP B . D 2 HOH 17 127 41 HOH TIP B . D 2 HOH 18 128 43 HOH TIP B . D 2 HOH 19 129 46 HOH TIP B . D 2 HOH 20 130 47 HOH TIP B . D 2 HOH 21 131 49 HOH TIP B . D 2 HOH 22 132 53 HOH TIP B . D 2 HOH 23 133 55 HOH TIP B . D 2 HOH 24 134 58 HOH TIP B . D 2 HOH 25 135 59 HOH TIP B . D 2 HOH 26 136 64 HOH TIP B . D 2 HOH 27 137 66 HOH TIP B . D 2 HOH 28 138 67 HOH TIP B . D 2 HOH 29 139 69 HOH TIP B . D 2 HOH 30 140 72 HOH TIP B . D 2 HOH 31 141 75 HOH TIP B . D 2 HOH 32 142 80 HOH TIP B . D 2 HOH 33 143 84 HOH TIP B . D 2 HOH 34 144 88 HOH TIP B . D 2 HOH 35 145 89 HOH TIP B . D 2 HOH 36 146 90 HOH TIP B . D 2 HOH 37 147 91 HOH TIP B . D 2 HOH 38 148 93 HOH TIP B . D 2 HOH 39 149 94 HOH TIP B . D 2 HOH 40 150 95 HOH TIP B . D 2 HOH 41 151 96 HOH TIP B . D 2 HOH 42 152 98 HOH TIP B . D 2 HOH 43 153 100 HOH TIP B . D 2 HOH 44 154 101 HOH TIP B . D 2 HOH 45 155 102 HOH TIP B . D 2 HOH 46 156 103 HOH TIP B . D 2 HOH 47 157 104 HOH TIP B . D 2 HOH 48 158 106 HOH TIP B . D 2 HOH 49 159 107 HOH TIP B . D 2 HOH 50 160 108 HOH TIP B . D 2 HOH 51 161 110 HOH TIP B . D 2 HOH 52 162 111 HOH TIP B . D 2 HOH 53 163 112 HOH TIP B . D 2 HOH 54 164 116 HOH TIP B . D 2 HOH 55 165 117 HOH TIP B . D 2 HOH 56 166 118 HOH TIP B . D 2 HOH 57 167 120 HOH TIP B . D 2 HOH 58 168 122 HOH TIP B . D 2 HOH 59 169 123 HOH TIP B . D 2 HOH 60 170 124 HOH TIP B . D 2 HOH 61 171 125 HOH TIP B . D 2 HOH 62 172 126 HOH TIP B . D 2 HOH 63 173 127 HOH TIP B . D 2 HOH 64 174 129 HOH TIP B . D 2 HOH 65 175 130 HOH TIP B . D 2 HOH 66 176 131 HOH TIP B . D 2 HOH 67 177 132 HOH TIP B . D 2 HOH 68 178 134 HOH TIP B . D 2 HOH 69 179 137 HOH TIP B . D 2 HOH 70 180 138 HOH TIP B . D 2 HOH 71 181 140 HOH TIP B . D 2 HOH 72 182 141 HOH TIP B . D 2 HOH 73 183 142 HOH TIP B . D 2 HOH 74 184 143 HOH TIP B . D 2 HOH 75 185 144 HOH TIP B . D 2 HOH 76 186 147 HOH TIP B . D 2 HOH 77 187 151 HOH TIP B . D 2 HOH 78 188 152 HOH TIP B . D 2 HOH 79 189 156 HOH TIP B . D 2 HOH 80 190 159 HOH TIP B . D 2 HOH 81 191 160 HOH TIP B . D 2 HOH 82 192 161 HOH TIP B . D 2 HOH 83 193 164 HOH TIP B . D 2 HOH 84 194 168 HOH TIP B . D 2 HOH 85 195 170 HOH TIP B . D 2 HOH 86 196 171 HOH TIP B . D 2 HOH 87 197 175 HOH TIP B . D 2 HOH 88 198 176 HOH TIP B . D 2 HOH 89 199 179 HOH TIP B . D 2 HOH 90 200 180 HOH TIP B . D 2 HOH 91 201 181 HOH TIP B . D 2 HOH 92 202 182 HOH TIP B . D 2 HOH 93 203 183 HOH TIP B . D 2 HOH 94 204 184 HOH TIP B . D 2 HOH 95 205 185 HOH TIP B . D 2 HOH 96 206 186 HOH TIP B . D 2 HOH 97 207 188 HOH TIP B . D 2 HOH 98 208 189 HOH TIP B . D 2 HOH 99 209 192 HOH TIP B . D 2 HOH 100 210 193 HOH TIP B . D 2 HOH 101 211 194 HOH TIP B . D 2 HOH 102 212 195 HOH TIP B . D 2 HOH 103 213 200 HOH TIP B . D 2 HOH 104 214 202 HOH TIP B . D 2 HOH 105 215 205 HOH TIP B . D 2 HOH 106 216 207 HOH TIP B . D 2 HOH 107 217 209 HOH TIP B . D 2 HOH 108 218 210 HOH TIP B . D 2 HOH 109 219 213 HOH TIP B . D 2 HOH 110 220 214 HOH TIP B . D 2 HOH 111 221 215 HOH TIP B . D 2 HOH 112 222 217 HOH TIP B . D 2 HOH 113 223 218 HOH TIP B . D 2 HOH 114 224 219 HOH TIP B . D 2 HOH 115 225 220 HOH TIP B . D 2 HOH 116 226 221 HOH TIP B . D 2 HOH 117 227 222 HOH TIP B . D 2 HOH 118 228 223 HOH TIP B . D 2 HOH 119 229 224 HOH TIP B . D 2 HOH 120 230 226 HOH TIP B . D 2 HOH 121 231 228 HOH TIP B . D 2 HOH 122 232 233 HOH TIP B . D 2 HOH 123 233 234 HOH TIP B . D 2 HOH 124 234 236 HOH TIP B . D 2 HOH 125 235 238 HOH TIP B . D 2 HOH 126 236 239 HOH TIP B . D 2 HOH 127 237 241 HOH TIP B . D 2 HOH 128 238 242 HOH TIP B . D 2 HOH 129 239 245 HOH TIP B . D 2 HOH 130 240 248 HOH TIP B . D 2 HOH 131 241 249 HOH TIP B . D 2 HOH 132 242 250 HOH TIP B . D 2 HOH 133 243 251 HOH TIP B . D 2 HOH 134 244 252 HOH TIP B . D 2 HOH 135 245 253 HOH TIP B . D 2 HOH 136 246 256 HOH TIP B . D 2 HOH 137 247 258 HOH TIP B . D 2 HOH 138 248 260 HOH TIP B . D 2 HOH 139 249 264 HOH TIP B . D 2 HOH 140 250 266 HOH TIP B . D 2 HOH 141 251 267 HOH TIP B . D 2 HOH 142 252 268 HOH TIP B . D 2 HOH 143 253 273 HOH TIP B . D 2 HOH 144 254 277 HOH TIP B . D 2 HOH 145 255 287 HOH TIP B . D 2 HOH 146 256 297 HOH TIP B . D 2 HOH 147 257 298 HOH TIP B . D 2 HOH 148 258 299 HOH TIP B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 15 A MSE 12 ? MET SELENOMETHIONINE 2 A MSE 92 A MSE 89 ? MET SELENOMETHIONINE 3 B MSE 15 B MSE 12 ? MET SELENOMETHIONINE 4 B MSE 92 B MSE 89 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2140 ? 1 MORE -16 ? 1 'SSA (A^2)' 12090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-10-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 68 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 158 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 92 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -141.45 _pdbx_validate_torsion.psi 35.97 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A GLY 2 ? A GLY 5 6 1 Y 1 A GLN 3 ? A GLN 6 7 1 Y 1 A ASN 4 ? A ASN 7 8 1 Y 1 B GLY -2 ? B GLY 1 9 1 Y 1 B SER -1 ? B SER 2 10 1 Y 1 B HIS 0 ? B HIS 3 11 1 Y 1 B MET 1 ? B MET 4 12 1 Y 1 B GLY 2 ? B GLY 5 13 1 Y 1 B GLN 3 ? B GLN 6 14 1 Y 1 B ASN 4 ? B ASN 7 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #