HEADER ISOMERASE 01-NOV-04 1XWN TITLE SOLUTION STRUCTURE OF CYCLOPHILIN LIKE 1(PPIL1) AND INSIGHTS INTO ITS TITLE 2 INTERACTION WITH SKIP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE LIKE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPIASE, ROTAMASE, CGI-124, UNQ2425/PRO4984; COMPND 5 EC: 5.2.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPIL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-22B(+) KEYWDS BETA BARREL, ISOMERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.XU,Y.XU,Y.TANG,J.WU,Y.SHI,Q.HUANG,Q.ZHANG REVDAT 5 29-MAY-24 1XWN 1 REMARK REVDAT 4 02-MAR-22 1XWN 1 REMARK SEQADV REVDAT 3 24-FEB-09 1XWN 1 VERSN REVDAT 2 13-JUN-06 1XWN 1 JRNL REVDAT 1 18-OCT-05 1XWN 0 JRNL AUTH C.XU,J.ZHANG,X.HUANG,J.SUN,Y.XU,Y.TANG,J.WU,Y.SHI,Q.HUANG, JRNL AUTH 2 Q.ZHANG JRNL TITL SOLUTION STRUCTURE OF HUMAN PEPTIDYL PROLYL ISOMERASE LIKE JRNL TITL 2 PROTEIN 1 AND INSIGHTS INTO ITS INTERACTION WITH SKIP JRNL REF J.BIOL.CHEM. V. 281 15900 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16595688 JRNL DOI 10.1074/JBC.M511155200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS 1.1 REMARK 3 AUTHORS : DELAGIO (NMRPIPE), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XWN COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000030851. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50MM NACL, 20MM PHOSPHATE BUFFER REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5MM PPIL1, U-15N,13C; 20MM REMARK 210 PHOSPHATE BUFFER NA, 50MM NACL, REMARK 210 90% H2O, 10% D2O; 0.5MM PPIL1, U- REMARK 210 15N,13C; 20MM PHOSPHATE BUFFER REMARK 210 NA, 50MM NACL, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3.110 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING, MOLECULAR DYNAMICS, REMARK 210 TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 LEU A 167 REMARK 465 GLU A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 HIS A 174 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 2 92.53 59.72 REMARK 500 1 TRP A 9 -60.64 -99.08 REMARK 500 1 GLN A 10 109.21 63.10 REMARK 500 1 LYS A 30 -66.51 -100.42 REMARK 500 1 PRO A 33 -35.63 -39.48 REMARK 500 1 PHE A 60 -84.61 -157.73 REMARK 500 1 ASP A 66 -58.54 -174.87 REMARK 500 1 THR A 70 22.24 -156.31 REMARK 500 1 GLU A 85 40.58 -94.54 REMARK 500 1 PRO A 88 101.61 -53.92 REMARK 500 1 ASP A 89 -46.02 -172.28 REMARK 500 1 PHE A 92 61.34 -112.99 REMARK 500 1 ALA A 103 -51.91 -121.83 REMARK 500 1 ASP A 123 81.21 -61.82 REMARK 500 1 PHE A 129 -40.36 -177.45 REMARK 500 1 GLN A 150 -72.14 -155.36 REMARK 500 1 ASP A 151 41.83 -172.84 REMARK 500 1 ASP A 155 -167.11 -79.88 REMARK 500 2 PRO A 5 107.58 -53.63 REMARK 500 2 ASP A 7 152.94 69.47 REMARK 500 2 TRP A 9 118.48 -166.36 REMARK 500 2 PRO A 11 104.30 -47.86 REMARK 500 2 LYS A 30 -69.36 -100.41 REMARK 500 2 PHE A 53 179.09 59.86 REMARK 500 2 HIS A 54 -70.96 -145.11 REMARK 500 2 PHE A 60 -88.49 -160.41 REMARK 500 2 ASP A 66 -64.71 -160.60 REMARK 500 2 ARG A 72 -52.23 -165.21 REMARK 500 2 GLN A 81 135.63 70.80 REMARK 500 2 GLU A 83 -179.62 -67.83 REMARK 500 2 HIS A 87 -62.39 -171.99 REMARK 500 2 THR A 107 80.50 -152.19 REMARK 500 2 SER A 110 25.43 -149.44 REMARK 500 2 ASP A 123 79.52 -68.76 REMARK 500 2 PHE A 129 -42.90 -170.46 REMARK 500 2 SER A 149 30.28 -95.21 REMARK 500 2 GLN A 150 32.07 -152.65 REMARK 500 2 ALA A 162 87.31 -156.53 REMARK 500 3 ALA A 3 62.77 -116.63 REMARK 500 3 ILE A 4 87.85 -173.66 REMARK 500 3 TRP A 9 -51.29 -129.89 REMARK 500 3 PRO A 11 109.55 -55.66 REMARK 500 3 LYS A 30 -61.87 -100.32 REMARK 500 3 PRO A 33 -38.15 -38.96 REMARK 500 3 PHE A 60 -83.30 -152.30 REMARK 500 3 ASP A 66 73.53 -114.85 REMARK 500 3 ARG A 72 -46.42 -177.76 REMARK 500 3 HIS A 87 86.70 -162.79 REMARK 500 3 PRO A 88 100.59 -54.99 REMARK 500 3 ASP A 89 -44.83 -165.71 REMARK 500 REMARK 500 THIS ENTRY HAS 374 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6310 RELATED DB: BMRB DBREF 1XWN A 1 166 UNP Q9Y3C6 PPIL1_HUMAN 1 166 SEQADV 1XWN LEU A 167 UNP Q9Y3C6 EXPRESSION TAG SEQADV 1XWN GLU A 168 UNP Q9Y3C6 EXPRESSION TAG SEQADV 1XWN HIS A 169 UNP Q9Y3C6 EXPRESSION TAG SEQADV 1XWN HIS A 170 UNP Q9Y3C6 EXPRESSION TAG SEQADV 1XWN HIS A 171 UNP Q9Y3C6 EXPRESSION TAG SEQADV 1XWN HIS A 172 UNP Q9Y3C6 EXPRESSION TAG SEQADV 1XWN HIS A 173 UNP Q9Y3C6 EXPRESSION TAG SEQADV 1XWN HIS A 174 UNP Q9Y3C6 EXPRESSION TAG SEQRES 1 A 174 MET ALA ALA ILE PRO PRO ASP SER TRP GLN PRO PRO ASN SEQRES 2 A 174 VAL TYR LEU GLU THR SER MET GLY ILE ILE VAL LEU GLU SEQRES 3 A 174 LEU TYR TRP LYS HIS ALA PRO LYS THR CYS LYS ASN PHE SEQRES 4 A 174 ALA GLU LEU ALA ARG ARG GLY TYR TYR ASN GLY THR LYS SEQRES 5 A 174 PHE HIS ARG ILE ILE LYS ASP PHE MET ILE GLN GLY GLY SEQRES 6 A 174 ASP PRO THR GLY THR GLY ARG GLY GLY ALA SER ILE TYR SEQRES 7 A 174 GLY LYS GLN PHE GLU ASP GLU LEU HIS PRO ASP LEU LYS SEQRES 8 A 174 PHE THR GLY ALA GLY ILE LEU ALA MET ALA ASN ALA GLY SEQRES 9 A 174 PRO ASP THR ASN GLY SER GLN PHE PHE VAL THR LEU ALA SEQRES 10 A 174 PRO THR GLN TRP LEU ASP GLY LYS HIS THR ILE PHE GLY SEQRES 11 A 174 ARG VAL CYS GLN GLY ILE GLY MET VAL ASN ARG VAL GLY SEQRES 12 A 174 MET VAL GLU THR ASN SER GLN ASP ARG PRO VAL ASP ASP SEQRES 13 A 174 VAL LYS ILE ILE LYS ALA TYR PRO SER GLY LEU GLU HIS SEQRES 14 A 174 HIS HIS HIS HIS HIS HELIX 1 1 ALA A 32 ARG A 45 1 14 HELIX 2 2 GLY A 135 VAL A 145 1 11 SHEET 1 A 8 PHE A 53 ILE A 57 0 SHEET 2 A 8 MET A 61 GLY A 64 -1 O MET A 61 N ILE A 57 SHEET 3 A 8 THR A 107 THR A 115 -1 O PHE A 112 N GLY A 64 SHEET 4 A 8 ILE A 97 GLY A 104 -1 N GLY A 104 O THR A 107 SHEET 5 A 8 THR A 127 ARG A 131 -1 O GLY A 130 N LEU A 98 SHEET 6 A 8 ILE A 22 LEU A 27 -1 N GLU A 26 O ARG A 131 SHEET 7 A 8 ASN A 13 THR A 18 -1 N VAL A 14 O LEU A 25 SHEET 8 A 8 ILE A 159 PRO A 164 -1 O TYR A 163 N TYR A 15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1