HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-NOV-04 1Y1X TITLE STRUCTURAL ANALYSIS OF A HOMOLOG OF PROGRAMMED CELL DEATH 6 PROTEIN TITLE 2 FROM LEISHMANIA MAJOR FRIEDLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEISHMANIA MAJOR HOMOLOG OF PROGRAMMED CELL DEATH 6 COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: RESIDUES 53-234; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 347515; SOURCE 4 STRAIN: FRIEDLIN; SOURCE 5 GENE: LMJF13.1460; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21STAR(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET14B KEYWDS SGPP, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA CONSORTIUM, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.A.ROBIEN,W.G.J.HOL,STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA AUTHOR 2 CONSORTIUM (SGPP) REVDAT 6 03-APR-24 1Y1X 1 REMARK REVDAT 5 14-FEB-24 1Y1X 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1Y1X 1 VERSN REVDAT 3 24-FEB-09 1Y1X 1 VERSN REVDAT 2 01-FEB-05 1Y1X 1 REMARK REVDAT 1 07-DEC-04 1Y1X 0 JRNL AUTH M.A.ROBIEN,W.G.J.HOL, JRNL AUTH 2 STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA CONSORTIUM (SGPP) JRNL TITL STRUCTURAL ANALYSIS OF A HOMOLOG OF PROGRAMMED CELL DEATH 6 JRNL TITL 2 PROTEIN FROM LEISHMANIA MAJOR FRIEDLIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 29038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1575 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3679 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 174 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2827 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 216 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 27.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.856 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2896 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2556 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3901 ; 1.392 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5900 ; 0.852 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 353 ; 5.258 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 151 ;25.795 ;22.781 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 480 ;13.002 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;16.675 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 416 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3278 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 681 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 686 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2506 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1442 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1590 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 181 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 13 ; 0.132 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.053 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 42 ; 0.167 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.118 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1824 ; 2.726 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 737 ; 0.827 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2814 ; 3.590 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1217 ; 4.217 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1087 ; 5.538 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 26 REMARK 3 ORIGIN FOR THE GROUP (A): 95.2280 22.2540 26.6280 REMARK 3 T TENSOR REMARK 3 T11: -0.2318 T22: -0.1870 REMARK 3 T33: -0.1643 T12: 0.0143 REMARK 3 T13: -0.0087 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 6.7257 L22: 2.5608 REMARK 3 L33: 6.1563 L12: -0.9538 REMARK 3 L13: -1.1465 L23: -1.5806 REMARK 3 S TENSOR REMARK 3 S11: 0.1591 S12: 0.4798 S13: 0.0297 REMARK 3 S21: -0.0674 S22: -0.1351 S23: -0.0201 REMARK 3 S31: 0.2949 S32: 0.2091 S33: -0.0240 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 191 REMARK 3 RESIDUE RANGE : A 201 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): 78.9190 20.3500 33.3550 REMARK 3 T TENSOR REMARK 3 T11: -0.0535 T22: -0.0776 REMARK 3 T33: -0.0293 T12: 0.0063 REMARK 3 T13: 0.0102 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.3773 L22: 0.2550 REMARK 3 L33: 0.1034 L12: 0.5445 REMARK 3 L13: 0.4806 L23: 0.0816 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: 0.1020 S13: -0.0262 REMARK 3 S21: 0.0329 S22: 0.0016 S23: -0.0202 REMARK 3 S31: 0.0502 S32: 0.0943 S33: -0.0013 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 27 B 191 REMARK 3 RESIDUE RANGE : B 211 B 212 REMARK 3 ORIGIN FOR THE GROUP (A): 63.7570 36.2560 44.0610 REMARK 3 T TENSOR REMARK 3 T11: -0.0693 T22: -0.0880 REMARK 3 T33: -0.0478 T12: -0.0200 REMARK 3 T13: 0.0053 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.0738 L22: 1.6645 REMARK 3 L33: 0.1783 L12: 0.2751 REMARK 3 L13: -0.0746 L23: -0.5345 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.0314 S13: 0.0314 REMARK 3 S21: -0.0216 S22: 0.0319 S23: 0.0626 REMARK 3 S31: -0.0642 S32: 0.0052 S33: -0.0138 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Y1X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000031012. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97461 REMARK 200 MONOCHROMATOR : UNSPEC REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33506 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12400 REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.47300 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PARTIAL MODEL FROM MAD EXPERIMENTS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULFATE, HEPES, MAGNESIUM REMARK 280 SULFATE, PH 7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.37700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.47250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.37700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.47250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -107.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 MET A 9 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 MET B 9 REMARK 465 PRO B 10 REMARK 465 ALA B 20 REMARK 465 ARG B 21 REMARK 465 HIS B 22 REMARK 465 MET B 23 REMARK 465 ASN B 24 REMARK 465 ASP B 25 REMARK 465 ASN B 26 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 169 59.66 -100.93 REMARK 500 ARG B 172 55.53 31.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 37 OD1 REMARK 620 2 ASP A 39 OD1 80.0 REMARK 620 3 SER A 41 OG 85.4 79.6 REMARK 620 4 ALA A 43 O 80.3 152.1 79.2 REMARK 620 5 GLU A 48 OE1 99.7 120.0 160.2 82.8 REMARK 620 6 GLU A 48 OE2 99.5 68.6 146.3 134.5 52.1 REMARK 620 7 HOH A 508 O 170.0 105.8 87.6 91.3 84.6 90.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD1 REMARK 620 2 ASN A 75 OD1 88.3 REMARK 620 3 SER A 77 OG 89.7 79.1 REMARK 620 4 GLU A 79 O 81.4 148.0 70.7 REMARK 620 5 GLU A 84 OE1 102.1 129.9 148.3 82.0 REMARK 620 6 GLU A 84 OE2 91.3 81.7 160.8 128.5 49.6 REMARK 620 7 HOH A 554 O 170.4 83.5 83.8 103.0 87.1 92.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 211 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 37 OD1 REMARK 620 2 ASP B 39 OD1 80.6 REMARK 620 3 SER B 41 OG 84.5 76.1 REMARK 620 4 ALA B 43 O 84.3 151.1 78.0 REMARK 620 5 GLU B 48 OE1 103.6 127.2 156.0 80.3 REMARK 620 6 GLU B 48 OE2 100.5 73.3 147.7 134.0 53.9 REMARK 620 7 HOH B 558 O 170.5 101.3 86.9 89.9 82.8 89.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 212 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 73 OD1 REMARK 620 2 ASN B 75 OD1 80.4 REMARK 620 3 SER B 77 OG 96.4 78.2 REMARK 620 4 GLU B 79 O 89.8 149.9 74.7 REMARK 620 5 GLU B 84 OE2 88.1 78.9 155.6 129.4 REMARK 620 6 GLU B 84 OE1 97.9 128.4 151.6 80.9 49.6 REMARK 620 7 HOH B 597 O 172.0 92.8 86.3 98.1 86.5 82.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 213 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: LMAJ01134AAC RELATED DB: TARGETDB DBREF 1Y1X A 10 191 UNP Q9N9M3 Q9N9M3_LEIMA 53 234 DBREF 1Y1X B 10 191 UNP Q9N9M3 Q9N9M3_LEIMA 53 234 SEQADV 1Y1X MET A 1 UNP Q9N9M3 CLONING ARTIFACT SEQADV 1Y1X ALA A 2 UNP Q9N9M3 CLONING ARTIFACT SEQADV 1Y1X HIS A 3 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS A 4 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS A 5 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS A 6 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS A 7 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS A 8 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X MET A 9 UNP Q9N9M3 CLONING ARTIFACT SEQADV 1Y1X MET B 1 UNP Q9N9M3 CLONING ARTIFACT SEQADV 1Y1X ALA B 2 UNP Q9N9M3 CLONING ARTIFACT SEQADV 1Y1X HIS B 3 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS B 4 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS B 5 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS B 6 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS B 7 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X HIS B 8 UNP Q9N9M3 EXPRESSION TAG SEQADV 1Y1X MET B 9 UNP Q9N9M3 CLONING ARTIFACT SEQRES 1 A 191 MET ALA HIS HIS HIS HIS HIS HIS MET PRO THR SER THR SEQRES 2 A 191 GLY VAL TYR ALA PRO SER ALA ARG HIS MET ASN ASP ASN SEQRES 3 A 191 GLN GLU LEU MET GLU TRP PHE ARG ALA VAL ASP THR ASP SEQRES 4 A 191 GLY SER GLY ALA ILE SER VAL PRO GLU LEU ASN ALA ALA SEQRES 5 A 191 LEU SER SER ALA GLY VAL PRO PHE SER LEU ALA THR THR SEQRES 6 A 191 GLU LYS LEU LEU HIS MET TYR ASP LYS ASN HIS SER GLY SEQRES 7 A 191 GLU ILE THR PHE ASP GLU PHE LYS ASP LEU HIS HIS PHE SEQRES 8 A 191 ILE LEU SER MET ARG GLU GLY PHE ARG LYS ARG ASP SER SEQRES 9 A 191 SER GLY ASP GLY ARG LEU ASP SER ASN GLU VAL ARG ALA SEQRES 10 A 191 ALA LEU LEU SER SER GLY TYR GLN VAL SER GLU GLN THR SEQRES 11 A 191 PHE GLN ALA LEU MET ARG LYS PHE ASP ARG GLN ARG ARG SEQRES 12 A 191 GLY SER LEU GLY PHE ASP ASP TYR VAL GLU LEU SER ILE SEQRES 13 A 191 PHE VAL CYS ARG VAL ARG ASN VAL PHE ALA PHE TYR ASP SEQRES 14 A 191 ARG GLU ARG THR GLY GLN VAL THR PHE THR PHE ASP THR SEQRES 15 A 191 PHE ILE GLY GLY SER VAL SER ILE LEU SEQRES 1 B 191 MET ALA HIS HIS HIS HIS HIS HIS MET PRO THR SER THR SEQRES 2 B 191 GLY VAL TYR ALA PRO SER ALA ARG HIS MET ASN ASP ASN SEQRES 3 B 191 GLN GLU LEU MET GLU TRP PHE ARG ALA VAL ASP THR ASP SEQRES 4 B 191 GLY SER GLY ALA ILE SER VAL PRO GLU LEU ASN ALA ALA SEQRES 5 B 191 LEU SER SER ALA GLY VAL PRO PHE SER LEU ALA THR THR SEQRES 6 B 191 GLU LYS LEU LEU HIS MET TYR ASP LYS ASN HIS SER GLY SEQRES 7 B 191 GLU ILE THR PHE ASP GLU PHE LYS ASP LEU HIS HIS PHE SEQRES 8 B 191 ILE LEU SER MET ARG GLU GLY PHE ARG LYS ARG ASP SER SEQRES 9 B 191 SER GLY ASP GLY ARG LEU ASP SER ASN GLU VAL ARG ALA SEQRES 10 B 191 ALA LEU LEU SER SER GLY TYR GLN VAL SER GLU GLN THR SEQRES 11 B 191 PHE GLN ALA LEU MET ARG LYS PHE ASP ARG GLN ARG ARG SEQRES 12 B 191 GLY SER LEU GLY PHE ASP ASP TYR VAL GLU LEU SER ILE SEQRES 13 B 191 PHE VAL CYS ARG VAL ARG ASN VAL PHE ALA PHE TYR ASP SEQRES 14 B 191 ARG GLU ARG THR GLY GLN VAL THR PHE THR PHE ASP THR SEQRES 15 B 191 PHE ILE GLY GLY SER VAL SER ILE LEU HET CA A 201 1 HET CA A 202 1 HET SO4 A 203 5 HET SO4 A 204 5 HET CA B 211 1 HET CA B 212 1 HET SO4 B 213 5 HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION FORMUL 3 CA 4(CA 2+) FORMUL 5 SO4 3(O4 S 2-) FORMUL 10 HOH *216(H2 O) HELIX 1 1 GLU A 28 ASP A 37 1 10 HELIX 2 2 SER A 45 SER A 54 1 10 HELIX 3 3 SER A 61 ASP A 73 1 13 HELIX 4 4 THR A 81 ASP A 103 1 23 HELIX 5 5 ASP A 111 SER A 121 1 11 HELIX 6 6 SER A 127 ASP A 139 1 13 HELIX 7 7 GLY A 147 ASP A 169 1 23 HELIX 8 8 PHE A 180 LEU A 191 1 12 HELIX 9 9 GLU B 28 ASP B 37 1 10 HELIX 10 10 SER B 45 SER B 54 1 10 HELIX 11 11 SER B 61 ASP B 73 1 13 HELIX 12 12 THR B 81 ASP B 103 1 23 HELIX 13 13 ASP B 111 SER B 121 1 11 HELIX 14 14 SER B 127 ASP B 139 1 13 HELIX 15 15 GLY B 147 ASP B 169 1 23 HELIX 16 16 PHE B 180 LEU B 191 1 12 SHEET 1 A 2 GLN A 175 THR A 179 0 SHEET 2 A 2 GLN B 175 THR B 179 -1 O PHE B 178 N VAL A 176 LINK OD1 ASP A 37 CA CA A 201 1555 1555 2.30 LINK OD1 ASP A 39 CA CA A 201 1555 1555 2.38 LINK OG SER A 41 CA CA A 201 1555 1555 2.51 LINK O ALA A 43 CA CA A 201 1555 1555 2.43 LINK OE1 GLU A 48 CA CA A 201 1555 1555 2.42 LINK OE2 GLU A 48 CA CA A 201 1555 1555 2.57 LINK OD1 ASP A 73 CA CA A 202 1555 1555 2.27 LINK OD1 ASN A 75 CA CA A 202 1555 1555 2.44 LINK OG SER A 77 CA CA A 202 1555 1555 2.76 LINK O GLU A 79 CA CA A 202 1555 1555 2.57 LINK OE1 GLU A 84 CA CA A 202 1555 1555 2.42 LINK OE2 GLU A 84 CA CA A 202 1555 1555 2.72 LINK CA CA A 201 O HOH A 508 1555 1555 2.39 LINK CA CA A 202 O HOH A 554 1555 1555 2.13 LINK OD1 ASP B 37 CA CA B 211 1555 1555 2.27 LINK OD1 ASP B 39 CA CA B 211 1555 1555 2.37 LINK OG SER B 41 CA CA B 211 1555 1555 2.55 LINK O ALA B 43 CA CA B 211 1555 1555 2.36 LINK OE1 GLU B 48 CA CA B 211 1555 1555 2.44 LINK OE2 GLU B 48 CA CA B 211 1555 1555 2.40 LINK OD1 ASP B 73 CA CA B 212 1555 1555 2.23 LINK OD1 ASN B 75 CA CA B 212 1555 1555 2.56 LINK OG SER B 77 CA CA B 212 1555 1555 2.40 LINK O GLU B 79 CA CA B 212 1555 1555 2.44 LINK OE2 GLU B 84 CA CA B 212 1555 1555 2.66 LINK OE1 GLU B 84 CA CA B 212 1555 1555 2.52 LINK CA CA B 211 O HOH B 558 1555 1555 2.49 LINK CA CA B 212 O HOH B 597 1555 1555 2.22 SITE 1 AC1 6 ASP A 37 ASP A 39 SER A 41 ALA A 43 SITE 2 AC1 6 GLU A 48 HOH A 508 SITE 1 AC2 6 ASP A 73 ASN A 75 SER A 77 GLU A 79 SITE 2 AC2 6 GLU A 84 HOH A 554 SITE 1 AC3 3 SER A 61 LEU A 62 ALA A 63 SITE 1 AC4 5 ARG A 34 SER A 112 ARG A 116 GLN A 132 SITE 2 AC4 5 ARG B 34 SITE 1 AC5 6 ASP B 37 ASP B 39 SER B 41 ALA B 43 SITE 2 AC5 6 GLU B 48 HOH B 558 SITE 1 AC6 6 ASP B 73 ASN B 75 SER B 77 GLU B 79 SITE 2 AC6 6 GLU B 84 HOH B 597 SITE 1 AC7 3 SER B 61 LEU B 62 ALA B 63 CRYST1 86.754 92.945 52.137 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011527 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010759 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019180 0.00000