HEADER HYDROLASE 22-NOV-04 1Y2K TITLE CATALYTIC DOMAIN OF HUMAN PHOSPHODIESTERASE 4D IN COMPLEX WITH 3,5- TITLE 2 DIMETHYL-1-(3-NITRO-PHENYL)-1H-PYRAZOLE-4-CARBOXYLIC ACID ETHYL ESTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 4D; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN OF HUMAN PHOSPHODIESTERASE 4D; COMPND 5 SYNONYM: DPDE3, PDE43; COMPND 6 EC: 3.1.4.17; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDE4D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON PLUS(RIL); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PHOSPHODIESTERASE, PDE, PDE4D, PYRAZOLE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.L.CARD,L.BLASDEL,B.P.ENGLAND,C.ZHANG,Y.SUZUKI,S.GILLETTE,D.FONG, AUTHOR 2 P.N.IBRAHIM,D.R.ARTIS,G.BOLLAG,M.V.MILBURN,S.-H.KIM,J.SCHLESSINGER, AUTHOR 3 K.Y.J.ZHANG REVDAT 4 14-FEB-24 1Y2K 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 1Y2K 1 VERSN REVDAT 2 24-FEB-09 1Y2K 1 VERSN REVDAT 1 01-MAR-05 1Y2K 0 JRNL AUTH G.L.CARD,L.BLASDEL,B.P.ENGLAND,C.ZHANG,Y.SUZUKI,S.GILLETTE, JRNL AUTH 2 D.FONG,P.N.IBRAHIM,D.R.ARTIS,G.BOLLAG,M.V.MILBURN,S.-H.KIM, JRNL AUTH 3 J.SCHLESSINGER,K.Y.J.ZHANG JRNL TITL A FAMILY OF PHOSPHODIESTERASE INHIBITORS DISCOVERED BY JRNL TITL 2 COCRYSTALLOGRAPHY AND SCAFFOLD-BASED DRUG DESIGN JRNL REF NAT.BIOTECHNOL. V. 23 201 2005 JRNL REFN ISSN 1087-0156 JRNL PMID 15685167 JRNL DOI 10.1038/NBT1059 REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.25 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 143297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7536 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.36 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.40 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10018 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 570 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5253 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 178 REMARK 3 SOLVENT ATOMS : 459 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.55000 REMARK 3 B22 (A**2) : -0.36000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.055 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.036 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.900 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5532 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 4868 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7450 ; 1.060 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11346 ; 0.786 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 645 ; 2.719 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 849 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5953 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1021 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1328 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5538 ; 0.222 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2868 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 348 ; 0.104 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.078 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 52 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.111 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3249 ; 0.357 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5304 ; 0.724 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2283 ; 1.284 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2146 ; 2.151 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 411 REMARK 3 ORIGIN FOR THE GROUP (A): 3.4050 41.4760 15.3270 REMARK 3 T TENSOR REMARK 3 T11: 0.0783 T22: 0.0730 REMARK 3 T33: 0.0263 T12: -0.0160 REMARK 3 T13: 0.0028 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.6331 L22: 0.6790 REMARK 3 L33: 1.2386 L12: 0.2400 REMARK 3 L13: -0.4044 L23: -0.0720 REMARK 3 S TENSOR REMARK 3 S11: -0.0757 S12: 0.0596 S13: -0.0013 REMARK 3 S21: -0.0203 S22: 0.0379 S23: 0.0654 REMARK 3 S31: 0.1132 S32: -0.0692 S33: 0.0378 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 86 B 411 REMARK 3 ORIGIN FOR THE GROUP (A): 15.3510 43.0030 54.2060 REMARK 3 T TENSOR REMARK 3 T11: 0.0274 T22: 0.0780 REMARK 3 T33: 0.0223 T12: -0.0036 REMARK 3 T13: 0.0159 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 0.4302 L22: 0.6888 REMARK 3 L33: 1.2495 L12: 0.1037 REMARK 3 L13: -0.0868 L23: -0.2945 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: 0.0250 S13: -0.0396 REMARK 3 S21: -0.0161 S22: -0.0143 S23: -0.0704 REMARK 3 S31: -0.0207 S32: 0.0632 S33: 0.0079 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Y2K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : BLU-ICE REMARK 200 DATA SCALING SOFTWARE : ELVES REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 143297 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 81.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, ETHYLENE GLYCOL, ISOPROPANOL, REMARK 280 GLYCEROL AND DTT , PH 6.0-8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 288K, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.17450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.00500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.44300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.00500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.17450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.44300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS ONE MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 65 REMARK 465 GLY A 66 REMARK 465 SER A 67 REMARK 465 SER A 68 REMARK 465 HIS A 69 REMARK 465 HIS A 70 REMARK 465 HIS A 71 REMARK 465 HIS A 72 REMARK 465 HIS A 73 REMARK 465 HIS A 74 REMARK 465 SER A 75 REMARK 465 SER A 76 REMARK 465 GLY A 77 REMARK 465 LEU A 78 REMARK 465 VAL A 79 REMARK 465 PRO A 80 REMARK 465 ARG A 81 REMARK 465 GLY A 82 REMARK 465 SER A 83 REMARK 465 HIS A 84 REMARK 465 MET A 85 REMARK 465 GLN A 412 REMARK 465 SER A 413 REMARK 465 MET B 65 REMARK 465 GLY B 66 REMARK 465 SER B 67 REMARK 465 SER B 68 REMARK 465 HIS B 69 REMARK 465 HIS B 70 REMARK 465 HIS B 71 REMARK 465 HIS B 72 REMARK 465 HIS B 73 REMARK 465 HIS B 74 REMARK 465 SER B 75 REMARK 465 SER B 76 REMARK 465 GLY B 77 REMARK 465 LEU B 78 REMARK 465 VAL B 79 REMARK 465 PRO B 80 REMARK 465 ARG B 81 REMARK 465 GLY B 82 REMARK 465 SER B 83 REMARK 465 HIS B 84 REMARK 465 MET B 85 REMARK 465 THR B 293 REMARK 465 SER B 294 REMARK 465 SER B 295 REMARK 465 GLY B 296 REMARK 465 GLN B 412 REMARK 465 SER B 413 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 254 CG CD CE NZ REMARK 480 GLU B 87 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 87 CB GLU B 87 CG 0.176 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 156 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 318 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 151 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 376 -60.22 -124.16 REMARK 500 ASP B 225 12.61 58.13 REMARK 500 ILE B 376 -59.10 -123.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 HOH 1003-1008 ARE ASSOCIATED WITH CHAIN A. REMARK 600 HOH 2003-2008 ARE ASSOCIATED WITH CHAIN B. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 164 NE2 REMARK 620 2 HIS A 200 NE2 93.4 REMARK 620 3 ASP A 201 OD2 88.2 83.3 REMARK 620 4 ASP A 318 OD1 89.1 91.9 174.3 REMARK 620 5 ASP A 318 OD2 88.1 88.8 171.0 3.4 REMARK 620 6 HOH A1007 O 172.5 93.6 89.9 93.4 94.8 REMARK 620 7 HOH A1008 O 88.4 176.9 99.4 85.5 88.7 84.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 201 OD1 REMARK 620 2 HOH A1003 O 87.8 REMARK 620 3 HOH A1004 O 84.2 89.2 REMARK 620 4 HOH A1005 O 168.3 84.3 87.0 REMARK 620 5 HOH A1006 O 98.0 87.0 175.5 90.2 REMARK 620 6 HOH A1007 O 92.3 175.0 95.7 96.3 88.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 164 NE2 REMARK 620 2 HIS B 200 NE2 94.4 REMARK 620 3 ASP B 201 OD2 87.8 85.9 REMARK 620 4 ASP B 318 OD1 88.3 82.6 167.5 REMARK 620 5 ASP B 318 OD1 90.4 91.5 176.7 9.4 REMARK 620 6 HOH B2007 O 172.3 92.9 90.1 95.3 92.0 REMARK 620 7 HOH B2008 O 87.1 174.9 99.1 92.6 83.6 85.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 201 OD1 REMARK 620 2 HOH B2003 O 87.0 REMARK 620 3 HOH B2004 O 84.4 89.7 REMARK 620 4 HOH B2005 O 167.5 84.8 86.2 REMARK 620 5 HOH B2006 O 98.1 87.0 175.7 90.9 REMARK 620 6 HOH B2007 O 92.7 174.9 95.3 96.4 88.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7DE B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7DE A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 712 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 715 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 716 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 717 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 718 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 719 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 720 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 722 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 723 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 724 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 725 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 726 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 727 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 728 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 729 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 730 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 731 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 732 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 733 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 734 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 735 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 736 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 737 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 738 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 739 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 740 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Y2B RELATED DB: PDB REMARK 900 PDE4D IN COMPLEX WITH 3,5-DIMETHYL-1H-PYRAZOLE-4-CARBOXYLIC ACID REMARK 900 ETHYL ESTER REMARK 900 RELATED ID: 1Y2C RELATED DB: PDB REMARK 900 PDE4D IN COMPLEX WITH 3,5-DIMETHYL-1-PHENYL-1H-PYRAZOLE-4- REMARK 900 CARBOXYLIC ACID ETHYL ESTER REMARK 900 RELATED ID: 1Y2D RELATED DB: PDB REMARK 900 PDE4D IN COMPLEX WITH 1-(4-METHOXY-PHENYL)-3,5-DIMETHYL-1H-PYRAZOLE- REMARK 900 4-CARBOXYLIC ACID ETHYL ESTER REMARK 900 RELATED ID: 1Y2E RELATED DB: PDB REMARK 900 PDE4D IN COMPLEX WITH 1-(4-AMINO-PHENYL)-3,5-DIMETHYL-1H-PYRAZOLE-4- REMARK 900 CARBOXYLIC ACID ETHYL ESTER REMARK 900 RELATED ID: 1Y2H RELATED DB: PDB REMARK 900 PDE4B IN COMPLEX WITH 1-(2-CHLORO-PHENYL)-3,5-DIMETHYL-1H-PYRAZOLE- REMARK 900 4-CARBOXYLIC ACID ETHYL ESTER REMARK 900 RELATED ID: 1Y2J RELATED DB: PDB REMARK 900 PDE4B IN COMPLEX WITH 3,5-DIMETHYL-1-(3-NITRO-PHENYL)-1H-PYRAZOLE-4- REMARK 900 CARBOXYLIC ACID ETHYL ESTER DBREF 1Y2K A 86 413 UNP Q08499 PDE4D_HUMAN 388 715 DBREF 1Y2K B 86 413 UNP Q08499 PDE4D_HUMAN 388 715 SEQADV 1Y2K MET A 65 UNP Q08499 INITIATING METHIONINE SEQADV 1Y2K GLY A 66 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER A 67 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER A 68 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K HIS A 69 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS A 70 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS A 71 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS A 72 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS A 73 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS A 74 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K SER A 75 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER A 76 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K GLY A 77 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K LEU A 78 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K VAL A 79 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K PRO A 80 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K ARG A 81 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K GLY A 82 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER A 83 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K HIS A 84 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K MET A 85 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K MET B 65 UNP Q08499 INITIATING METHIONINE SEQADV 1Y2K GLY B 66 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER B 67 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER B 68 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K HIS B 69 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS B 70 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS B 71 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS B 72 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS B 73 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K HIS B 74 UNP Q08499 EXPRESSION TAG SEQADV 1Y2K SER B 75 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER B 76 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K GLY B 77 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K LEU B 78 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K VAL B 79 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K PRO B 80 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K ARG B 81 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K GLY B 82 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K SER B 83 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K HIS B 84 UNP Q08499 CLONING ARTIFACT SEQADV 1Y2K MET B 85 UNP Q08499 CLONING ARTIFACT SEQRES 1 A 349 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 349 LEU VAL PRO ARG GLY SER HIS MET THR GLU GLN GLU ASP SEQRES 3 A 349 VAL LEU ALA LYS GLU LEU GLU ASP VAL ASN LYS TRP GLY SEQRES 4 A 349 LEU HIS VAL PHE ARG ILE ALA GLU LEU SER GLY ASN ARG SEQRES 5 A 349 PRO LEU THR VAL ILE MET HIS THR ILE PHE GLN GLU ARG SEQRES 6 A 349 ASP LEU LEU LYS THR PHE LYS ILE PRO VAL ASP THR LEU SEQRES 7 A 349 ILE THR TYR LEU MET THR LEU GLU ASP HIS TYR HIS ALA SEQRES 8 A 349 ASP VAL ALA TYR HIS ASN ASN ILE HIS ALA ALA ASP VAL SEQRES 9 A 349 VAL GLN SER THR HIS VAL LEU LEU SER THR PRO ALA LEU SEQRES 10 A 349 GLU ALA VAL PHE THR ASP LEU GLU ILE LEU ALA ALA ILE SEQRES 11 A 349 PHE ALA SER ALA ILE HIS ASP VAL ASP HIS PRO GLY VAL SEQRES 12 A 349 SER ASN GLN PHE LEU ILE ASN THR ASN SER GLU LEU ALA SEQRES 13 A 349 LEU MET TYR ASN ASP SER SER VAL LEU GLU ASN HIS HIS SEQRES 14 A 349 LEU ALA VAL GLY PHE LYS LEU LEU GLN GLU GLU ASN CYS SEQRES 15 A 349 ASP ILE PHE GLN ASN LEU THR LYS LYS GLN ARG GLN SER SEQRES 16 A 349 LEU ARG LYS MET VAL ILE ASP ILE VAL LEU ALA THR ASP SEQRES 17 A 349 MET SER LYS HIS MET ASN LEU LEU ALA ASP LEU LYS THR SEQRES 18 A 349 MET VAL GLU THR LYS LYS VAL THR SER SER GLY VAL LEU SEQRES 19 A 349 LEU LEU ASP ASN TYR SER ASP ARG ILE GLN VAL LEU GLN SEQRES 20 A 349 ASN MET VAL HIS CYS ALA ASP LEU SER ASN PRO THR LYS SEQRES 21 A 349 PRO LEU GLN LEU TYR ARG GLN TRP THR ASP ARG ILE MET SEQRES 22 A 349 GLU GLU PHE PHE ARG GLN GLY ASP ARG GLU ARG GLU ARG SEQRES 23 A 349 GLY MET GLU ILE SER PRO MET CYS ASP LYS HIS ASN ALA SEQRES 24 A 349 SER VAL GLU LYS SER GLN VAL GLY PHE ILE ASP TYR ILE SEQRES 25 A 349 VAL HIS PRO LEU TRP GLU THR TRP ALA ASP LEU VAL HIS SEQRES 26 A 349 PRO ASP ALA GLN ASP ILE LEU ASP THR LEU GLU ASP ASN SEQRES 27 A 349 ARG GLU TRP TYR GLN SER THR ILE PRO GLN SER SEQRES 1 B 349 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 349 LEU VAL PRO ARG GLY SER HIS MET THR GLU GLN GLU ASP SEQRES 3 B 349 VAL LEU ALA LYS GLU LEU GLU ASP VAL ASN LYS TRP GLY SEQRES 4 B 349 LEU HIS VAL PHE ARG ILE ALA GLU LEU SER GLY ASN ARG SEQRES 5 B 349 PRO LEU THR VAL ILE MET HIS THR ILE PHE GLN GLU ARG SEQRES 6 B 349 ASP LEU LEU LYS THR PHE LYS ILE PRO VAL ASP THR LEU SEQRES 7 B 349 ILE THR TYR LEU MET THR LEU GLU ASP HIS TYR HIS ALA SEQRES 8 B 349 ASP VAL ALA TYR HIS ASN ASN ILE HIS ALA ALA ASP VAL SEQRES 9 B 349 VAL GLN SER THR HIS VAL LEU LEU SER THR PRO ALA LEU SEQRES 10 B 349 GLU ALA VAL PHE THR ASP LEU GLU ILE LEU ALA ALA ILE SEQRES 11 B 349 PHE ALA SER ALA ILE HIS ASP VAL ASP HIS PRO GLY VAL SEQRES 12 B 349 SER ASN GLN PHE LEU ILE ASN THR ASN SER GLU LEU ALA SEQRES 13 B 349 LEU MET TYR ASN ASP SER SER VAL LEU GLU ASN HIS HIS SEQRES 14 B 349 LEU ALA VAL GLY PHE LYS LEU LEU GLN GLU GLU ASN CYS SEQRES 15 B 349 ASP ILE PHE GLN ASN LEU THR LYS LYS GLN ARG GLN SER SEQRES 16 B 349 LEU ARG LYS MET VAL ILE ASP ILE VAL LEU ALA THR ASP SEQRES 17 B 349 MET SER LYS HIS MET ASN LEU LEU ALA ASP LEU LYS THR SEQRES 18 B 349 MET VAL GLU THR LYS LYS VAL THR SER SER GLY VAL LEU SEQRES 19 B 349 LEU LEU ASP ASN TYR SER ASP ARG ILE GLN VAL LEU GLN SEQRES 20 B 349 ASN MET VAL HIS CYS ALA ASP LEU SER ASN PRO THR LYS SEQRES 21 B 349 PRO LEU GLN LEU TYR ARG GLN TRP THR ASP ARG ILE MET SEQRES 22 B 349 GLU GLU PHE PHE ARG GLN GLY ASP ARG GLU ARG GLU ARG SEQRES 23 B 349 GLY MET GLU ILE SER PRO MET CYS ASP LYS HIS ASN ALA SEQRES 24 B 349 SER VAL GLU LYS SER GLN VAL GLY PHE ILE ASP TYR ILE SEQRES 25 B 349 VAL HIS PRO LEU TRP GLU THR TRP ALA ASP LEU VAL HIS SEQRES 26 B 349 PRO ASP ALA GLN ASP ILE LEU ASP THR LEU GLU ASP ASN SEQRES 27 B 349 ARG GLU TRP TYR GLN SER THR ILE PRO GLN SER HET ZN A1001 1 HET MG A1002 1 HET 7DE A 602 21 HET EDO A 702 4 HET EDO A 704 4 HET EDO A 707 4 HET EDO A 712 4 HET EDO A 715 4 HET EDO A 716 4 HET EDO A 719 4 HET EDO A 720 4 HET EDO A 722 4 HET EDO A 723 4 HET EDO A 724 4 HET EDO A 729 4 HET EDO A 731 4 HET EDO A 732 4 HET EDO A 733 4 HET EDO A 736 4 HET EDO A 738 4 HET EDO A 739 4 HET ZN B1001 1 HET MG B1002 1 HET 7DE B 601 21 HET EDO B 701 4 HET EDO B 706 4 HET EDO B 708 4 HET EDO B 709 4 HET EDO B 717 4 HET EDO B 718 4 HET EDO B 725 4 HET EDO B 726 4 HET EDO B 727 4 HET EDO B 728 4 HET EDO B 730 4 HET EDO B 734 4 HET EDO B 735 4 HET EDO B 737 4 HET EDO B 740 4 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM 7DE 3,5-DIMETHYL-1-(3-NITROPHENYL)-1H-PYRAZOLE-4-CARBOXYLIC HETNAM 2 7DE ACID ETHYL ESTER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MG 2(MG 2+) FORMUL 5 7DE 2(C14 H15 N3 O4) FORMUL 6 EDO 33(C2 H6 O2) FORMUL 42 HOH *459(H2 O) HELIX 1 1 THR A 86 LEU A 96 1 11 HELIX 2 2 GLU A 97 VAL A 99 5 3 HELIX 3 3 HIS A 105 SER A 113 1 9 HELIX 4 4 ARG A 116 ARG A 129 1 14 HELIX 5 5 ASP A 130 PHE A 135 1 6 HELIX 6 6 PRO A 138 HIS A 152 1 15 HELIX 7 7 ASN A 161 SER A 177 1 17 HELIX 8 8 THR A 178 GLU A 182 5 5 HELIX 9 9 THR A 186 HIS A 200 1 15 HELIX 10 10 SER A 208 THR A 215 1 8 HELIX 11 11 SER A 217 ASN A 224 1 8 HELIX 12 12 SER A 227 LEU A 240 1 14 HELIX 13 13 LEU A 241 GLU A 243 5 3 HELIX 14 14 THR A 253 ALA A 270 1 18 HELIX 15 15 THR A 271 SER A 274 5 4 HELIX 16 16 LYS A 275 THR A 289 1 15 HELIX 17 17 ASN A 302 LEU A 319 1 18 HELIX 18 18 SER A 320 LYS A 324 5 5 HELIX 19 19 PRO A 325 GLY A 351 1 27 HELIX 20 20 SER A 364 ILE A 376 1 13 HELIX 21 21 ILE A 376 VAL A 388 1 13 HELIX 22 22 ALA A 392 THR A 409 1 18 HELIX 23 23 THR B 86 GLU B 97 1 12 HELIX 24 24 HIS B 105 SER B 113 1 9 HELIX 25 25 ARG B 116 ARG B 129 1 14 HELIX 26 26 ASP B 130 PHE B 135 1 6 HELIX 27 27 PRO B 138 HIS B 152 1 15 HELIX 28 28 ASN B 161 SER B 177 1 17 HELIX 29 29 THR B 178 GLU B 182 5 5 HELIX 30 30 THR B 186 HIS B 200 1 15 HELIX 31 31 SER B 208 THR B 215 1 8 HELIX 32 32 SER B 217 ASN B 224 1 8 HELIX 33 33 SER B 227 LEU B 240 1 14 HELIX 34 34 LEU B 241 GLU B 243 5 3 HELIX 35 35 THR B 253 ALA B 270 1 18 HELIX 36 36 THR B 271 SER B 274 5 4 HELIX 37 37 LYS B 275 THR B 289 1 15 HELIX 38 38 ASN B 302 LEU B 319 1 18 HELIX 39 39 SER B 320 LYS B 324 5 5 HELIX 40 40 PRO B 325 ARG B 350 1 26 HELIX 41 41 SER B 364 ILE B 376 1 13 HELIX 42 42 ILE B 376 VAL B 388 1 13 HELIX 43 43 ALA B 392 ILE B 410 1 19 LINK NE2 HIS A 164 ZN ZN A1001 1555 1555 2.20 LINK NE2 HIS A 200 ZN ZN A1001 1555 1555 2.18 LINK OD2 ASP A 201 ZN ZN A1001 1555 1555 2.08 LINK OD1 ASP A 201 MG MG A1002 1555 1555 2.11 LINK OD1AASP A 318 ZN ZN A1001 1555 1555 2.22 LINK OD2BASP A 318 ZN ZN A1001 1555 1555 2.10 LINK ZN ZN A1001 O HOH A1007 1555 1555 2.06 LINK ZN ZN A1001 O HOH A1008 1555 1555 2.17 LINK MG MG A1002 O HOH A1003 1555 1555 2.18 LINK MG MG A1002 O HOH A1004 1555 1555 2.16 LINK MG MG A1002 O HOH A1005 1555 1555 2.17 LINK MG MG A1002 O HOH A1006 1555 1555 2.11 LINK MG MG A1002 O HOH A1007 1555 1555 2.07 LINK NE2 HIS B 164 ZN ZN B1001 1555 1555 2.19 LINK NE2 HIS B 200 ZN ZN B1001 1555 1555 2.21 LINK OD2 ASP B 201 ZN ZN B1001 1555 1555 2.09 LINK OD1 ASP B 201 MG MG B1002 1555 1555 2.10 LINK OD1BASP B 318 ZN ZN B1001 1555 1555 2.16 LINK OD1AASP B 318 ZN ZN B1001 1555 1555 2.21 LINK ZN ZN B1001 O HOH B2007 1555 1555 2.04 LINK ZN ZN B1001 O HOH B2008 1555 1555 2.18 LINK MG MG B1002 O HOH B2003 1555 1555 2.15 LINK MG MG B1002 O HOH B2004 1555 1555 2.11 LINK MG MG B1002 O HOH B2005 1555 1555 2.15 LINK MG MG B1002 O HOH B2006 1555 1555 2.08 LINK MG MG B1002 O HOH B2007 1555 1555 2.10 CISPEP 1 HIS A 389 PRO A 390 0 -0.57 CISPEP 2 HIS B 389 PRO B 390 0 0.11 SITE 1 AC1 6 HIS A 164 HIS A 200 ASP A 201 ASP A 318 SITE 2 AC1 6 HOH A1007 HOH A1008 SITE 1 AC2 6 ASP A 201 HOH A1003 HOH A1004 HOH A1005 SITE 2 AC2 6 HOH A1006 HOH A1007 SITE 1 AC3 6 HIS B 164 HIS B 200 ASP B 201 ASP B 318 SITE 2 AC3 6 HOH B2007 HOH B2008 SITE 1 AC4 6 ASP B 201 HOH B2003 HOH B2004 HOH B2005 SITE 2 AC4 6 HOH B2006 HOH B2007 SITE 1 AC5 13 TYR B 159 THR B 271 MET B 273 ASP B 318 SITE 2 AC5 13 LEU B 319 ASN B 321 THR B 333 ILE B 336 SITE 3 AC5 13 GLN B 369 PHE B 372 HOH B2018 HOH B2025 SITE 4 AC5 13 HOH B2220 SITE 1 AC6 11 TYR A 159 THR A 271 MET A 273 ASP A 318 SITE 2 AC6 11 LEU A 319 ASN A 321 THR A 333 ILE A 336 SITE 3 AC6 11 GLN A 369 PHE A 372 HOH A1016 SITE 1 AC7 4 PRO A 411 GLU B 366 TYR B 406 HOH B2032 SITE 1 AC8 5 LYS A 262 ILE A 265 ASP A 266 HOH A1025 SITE 2 AC8 5 HOH B2184 SITE 1 AC9 6 ASN A 209 GLN A 210 HOH A1014 HOH A1034 SITE 2 AC9 6 HOH A1038 HOH A1046 SITE 1 BC1 3 HOH A1088 EDO B 728 HOH B2104 SITE 1 BC2 8 GLU A 150 ASP A 151 TYR A 153 ASN A 162 SITE 2 BC2 8 HOH A1075 HOH A1148 HOH A1204 GLN B 407 SITE 1 BC3 4 SER B 208 PHE B 340 GLN B 343 PRO B 356 SITE 1 BC4 3 LYS B 255 GLN B 258 SER B 259 SITE 1 BC5 5 PRO A 179 SER A 295 GLY A 296 HIS A 389 SITE 2 BC5 5 ASP A 391 SITE 1 BC6 6 ASN A 115 ALA A 155 ASN A 162 ILE A 163 SITE 2 BC6 6 HOH A1148 HOH A1171 SITE 1 BC7 6 LEU A 175 THR A 178 TRP A 384 ASP A 391 SITE 2 BC7 6 ALA A 392 HOH A1081 SITE 1 BC8 5 ARG B 257 ARG B 261 EDO B 718 HOH B2072 SITE 2 BC8 5 HOH B2110 SITE 1 BC9 5 ARG B 257 GLN B 258 ARG B 261 EDO B 717 SITE 2 BC9 5 HOH B2206 SITE 1 CC1 6 ALA A 183 VAL A 184 HOH A1128 GLY B 114 SITE 2 CC1 6 ASN B 115 ARG B 116 SITE 1 CC2 6 PHE A 238 PHE A 249 ARG A 257 ARG A 261 SITE 2 CC2 6 HOH A1060 HOH A1131 SITE 1 CC3 5 SER A 208 PHE A 340 PRO A 356 HOH A1056 SITE 2 CC3 5 HOH A1236 SITE 1 CC4 7 SER A 208 ASN A 209 LEU A 229 GLU A 230 SITE 2 CC4 7 ASP A 272 MET A 273 HOH A1030 SITE 1 CC5 3 VAL A 236 LYS A 239 HOH A1018 SITE 1 CC6 5 ASN A 224 LYS B 262 ILE B 265 ASP B 266 SITE 2 CC6 5 HOH B2041 SITE 1 CC7 10 HOH A1108 GLU B 150 ASP B 151 TYR B 153 SITE 2 CC7 10 ASN B 162 EDO B 734 HOH B2010 HOH B2132 SITE 3 CC7 10 HOH B2139 HOH B2167 SITE 1 CC8 3 ASN B 402 TRP B 405 HOH B2033 SITE 1 CC9 5 ARG A 330 EDO B 706 HOH B2014 HOH B2061 SITE 2 CC9 5 HOH B2219 SITE 1 DC1 4 ASP A 156 PRO A 205 HOH A1019 HOH A1033 SITE 1 DC2 6 ASP B 156 PRO B 205 ARG B 342 HOH B2022 SITE 2 DC2 6 HOH B2029 HOH B2227 SITE 1 DC3 4 LYS A 367 GLN A 407 ILE A 410 HOH A1052 SITE 1 DC4 8 ILE A 213 ASN A 216 SER A 217 ALA A 220 SITE 2 DC4 8 LEU A 221 ASP A 225 HOH A1040 ARG B 261 SITE 1 DC5 4 HIS A 154 ASP A 203 PRO A 205 LEU A 219 SITE 1 DC6 8 ASN B 115 ALA B 155 ASN B 162 ILE B 163 SITE 2 DC6 8 EDO B 726 HOH B2114 HOH B2167 HOH B2169 SITE 1 DC7 4 MET B 277 LEU B 280 ALA B 281 LYS B 284 SITE 1 DC8 3 ARG A 348 LYS A 360 HIS A 361 SITE 1 DC9 3 ASP B 282 MET B 286 GLN B 308 SITE 1 EC1 4 ASP A 397 GLU A 400 ASP A 401 ARG B 108 SITE 1 EC2 5 ARG A 335 GLU A 338 HOH A1172 HOH A1174 SITE 2 EC2 5 HOH A1191 SITE 1 EC3 6 ASP A 151 HIS A 152 GLY B 371 ASP B 374 SITE 2 EC3 6 TYR B 375 HOH B2124 CRYST1 60.349 78.886 164.010 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016570 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012677 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006097 0.00000