HEADER STRUCTURAL PROTEIN 03-DEC-04 1Y64 TITLE BNI1P FORMIN HOMOLOGY 2 DOMAIN COMPLEXED WITH ATP-ACTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN, ALPHA SKELETAL MUSCLE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-ACTIN 1; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BNI1 PROTEIN; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: FH2 DOMAIN, RESIDUES 1327-1769; COMPND 9 SYNONYM: SYNTHETIC LETHAL 39; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 TISSUE: MUSCLE; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 8 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 9 ORGANISM_TAXID: 4932; SOURCE 10 GENE: BNI1, PPF3, SHE5; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FH2 ACTIN CYTOSKELETON, COILED COIL, ACTIN, KEYWDS 2 TETRAMETHYLRHODAMINE-5-MALEIMIDE, ATP-STATE, STRUCTURAL KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.OTOMO,D.R.TOMCHICK,C.OTOMO,S.C.PANCHAL,M.MACHIUS,M.K.ROSEN REVDAT 3 24-FEB-09 1Y64 1 VERSN REVDAT 2 01-FEB-05 1Y64 1 JRNL REVDAT 1 18-JAN-05 1Y64 0 JRNL AUTH T.OTOMO,D.R.TOMCHICK,C.OTOMO,S.C.PANCHAL,M.MACHIUS, JRNL AUTH 2 M.K.ROSEN JRNL TITL STRUCTURAL BASIS OF ACTIN FILAMENT NUCLEATION AND JRNL TITL 2 PROCESSIVE CAPPING BY A FORMIN HOMOLOGY 2 DOMAIN JRNL REF NATURE V. 433 488 2005 JRNL REFN ISSN 0028-0836 JRNL PMID 15635372 JRNL DOI 10.1038/NATURE03251 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.XU,J.B.MOSELEY,I.SAGOT,F.POY,D.PELLMAN,B.L.GOODE, REMARK 1 AUTH 2 M.J.ECK REMARK 1 TITL CRYSTAL STRUCTURES OF A FORMIN HOMOLOGY-2 DOMAIN REMARK 1 TITL 2 REVEAL A TETHERED-DIMER ARCHITECTURE REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 116 711 2004 REMARK 1 REFN ISSN 0092-8674 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.SHIMADA,M.NYITRAI,I.R.VETTER,D.KUHLMANN,B.BUGYI, REMARK 1 AUTH 2 S.NARUMIYA,M.A.GEEVES,A.WITTINGHOFER REMARK 1 TITL THE CORE FH2 DOMAIN OF DIAPHANOUS-RELATED FORMINS REMARK 1 TITL 2 IS AN ELONGATED ACTIN BINDING PROTEIN THAT REMARK 1 TITL 3 INHIBITS POLYMERIZATION REMARK 1 REF MOL.CELL V. 13 511 2004 REMARK 1 REFN ISSN 1097-2765 REMARK 2 REMARK 2 RESOLUTION. 3.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 22738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.289 REMARK 3 FREE R VALUE : 0.313 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1145 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6130 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 113.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : 1.16 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.78 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Y64 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-04. REMARK 100 THE RCSB ID CODE IS RCSB031163. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99987, 0.9797, 0.97981, REMARK 200 0.96411 REMARK 200 MONOCHROMATOR : SILICON CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26458 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.050 REMARK 200 RESOLUTION RANGE LOW (A) : 31.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.39100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM BROMIDE, HEPES, DTT, REMARK 280 TRIS, ATP, CALCIUM CHLORIDE, ETHYLENE GLYCOL, PH 7.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 115.99850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.11450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 115.99850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.11450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 HIS A 40 REMARK 465 GLN A 41 REMARK 465 GLY A 42 REMARK 465 VAL A 43 REMARK 465 MET A 44 REMARK 465 VAL A 45 REMARK 465 GLY A 46 REMARK 465 MET A 47 REMARK 465 GLY A 48 REMARK 465 GLN A 49 REMARK 465 LYS A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 373 REMARK 465 CYS A 374 REMARK 465 PHE A 375 REMARK 465 MET B 1327 REMARK 465 PRO B 1328 REMARK 465 ALA B 1329 REMARK 465 SER B 1330 REMARK 465 GLN B 1331 REMARK 465 ILE B 1332 REMARK 465 LYS B 1333 REMARK 465 SER B 1334 REMARK 465 ALA B 1335 REMARK 465 VAL B 1336 REMARK 465 THR B 1337 REMARK 465 SER B 1338 REMARK 465 PRO B 1339 REMARK 465 LEU B 1340 REMARK 465 LEU B 1341 REMARK 465 PRO B 1342 REMARK 465 GLN B 1343 REMARK 465 SER B 1344 REMARK 465 PRO B 1345 REMARK 465 SER B 1346 REMARK 465 LEU B 1347 REMARK 465 PHE B 1348 REMARK 465 GLU B 1349 REMARK 465 LYS B 1761 REMARK 465 LYS B 1762 REMARK 465 ILE B 1763 REMARK 465 VAL B 1764 REMARK 465 GLU B 1765 REMARK 465 GLU B 1766 REMARK 465 GLN B 1767 REMARK 465 GLN B 1768 REMARK 465 LYS B 1769 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG B 1453 CD NE CZ NH1 NH2 REMARK 480 ARG B 1661 NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 127 O - C - N ANGL. DEV. = -11.0 DEGREES REMARK 500 LEU A 140 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 ARG A 210 N - CA - C ANGL. DEV. = -21.7 DEGREES REMARK 500 TYR A 306 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 PHE B1429 N - CA - C ANGL. DEV. = -20.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 22 -168.26 -64.65 REMARK 500 ALA A 26 -179.95 -174.96 REMARK 500 ALA A 29 143.15 -179.53 REMARK 500 SER A 33 94.18 -68.80 REMARK 500 LYS A 61 28.49 177.27 REMARK 500 PRO A 70 -24.13 -34.28 REMARK 500 HIS A 88 -72.54 -32.62 REMARK 500 THR A 89 -57.08 -22.65 REMARK 500 PHE A 90 -98.87 -64.62 REMARK 500 TYR A 91 -29.49 -33.11 REMARK 500 ASN A 92 -88.45 -93.71 REMARK 500 GLU A 93 28.94 -71.12 REMARK 500 LEU A 94 -33.92 -154.40 REMARK 500 PRO A 98 -132.82 10.49 REMARK 500 GLU A 99 -72.88 34.76 REMARK 500 GLU A 100 15.79 -66.13 REMARK 500 MET A 119 -74.95 -67.59 REMARK 500 MET A 123 -89.20 -62.61 REMARK 500 ASN A 128 54.14 -55.07 REMARK 500 MET A 132 147.13 -173.60 REMARK 500 ALA A 138 -127.04 -58.60 REMARK 500 VAL A 139 -76.24 31.82 REMARK 500 SER A 141 -70.66 -57.49 REMARK 500 SER A 145 4.75 -178.76 REMARK 500 ARG A 147 173.74 -54.95 REMARK 500 THR A 148 60.21 -154.58 REMARK 500 THR A 149 152.22 167.82 REMARK 500 SER A 155 44.02 -168.11 REMARK 500 ASP A 157 -73.91 -75.22 REMARK 500 TYR A 166 88.55 -179.51 REMARK 500 GLU A 167 73.31 67.37 REMARK 500 ASP A 179 30.75 -97.41 REMARK 500 ALA A 181 -130.40 -176.01 REMARK 500 GLU A 195 4.45 -69.88 REMARK 500 VAL A 201 -55.55 -147.93 REMARK 500 THR A 202 177.99 -49.81 REMARK 500 THR A 203 -78.03 -75.36 REMARK 500 GLU A 205 44.15 -79.69 REMARK 500 ARG A 206 -50.04 -157.39 REMARK 500 ILE A 208 48.74 -73.98 REMARK 500 VAL A 209 -11.89 -152.91 REMARK 500 ASP A 211 -30.17 -38.99 REMARK 500 LEU A 216 -149.90 139.35 REMARK 500 CYS A 217 72.26 57.76 REMARK 500 ALA A 220 -120.33 -45.53 REMARK 500 LEU A 221 -23.54 -156.15 REMARK 500 ASN A 225 -2.60 -159.11 REMARK 500 ALA A 230 -9.53 178.93 REMARK 500 SER A 232 15.81 -162.81 REMARK 500 SER A 233 -161.06 -165.49 REMARK 500 SER A 234 24.08 -165.04 REMARK 500 GLU A 237 -173.95 -64.64 REMARK 500 LYS A 238 165.87 169.41 REMARK 500 GLN A 246 106.39 -36.02 REMARK 500 ASN A 252 39.16 -85.17 REMARK 500 ARG A 254 -49.03 -28.79 REMARK 500 PRO A 258 -15.32 -41.20 REMARK 500 SER A 265 -52.53 -26.74 REMARK 500 PHE A 266 -24.29 -26.24 REMARK 500 MET A 269 92.08 -22.49 REMARK 500 GLU A 270 14.56 -67.56 REMARK 500 TYR A 279 -77.03 -65.84 REMARK 500 MET A 283 -5.08 -58.99 REMARK 500 ASP A 286 153.24 -40.73 REMARK 500 ASP A 288 -14.40 -44.94 REMARK 500 ASN A 296 57.23 -141.10 REMARK 500 THR A 303 -6.12 -43.36 REMARK 500 MET A 305 65.74 -104.23 REMARK 500 MET A 313 -86.64 -58.50 REMARK 500 GLN A 314 -50.14 -8.31 REMARK 500 SER A 323 60.20 -101.00 REMARK 500 THR A 324 18.70 -179.93 REMARK 500 ILE A 327 26.99 -142.30 REMARK 500 ALA A 331 76.17 178.48 REMARK 500 PRO A 332 177.82 -31.78 REMARK 500 ARG A 335 -14.12 -49.48 REMARK 500 LYS A 336 16.14 -68.51 REMARK 500 TYR A 337 4.67 -154.70 REMARK 500 SER A 338 -70.04 -45.46 REMARK 500 LEU A 346 10.77 -57.85 REMARK 500 ALA A 347 -38.34 -134.60 REMARK 500 LEU A 349 17.72 -67.12 REMARK 500 SER A 350 -97.41 24.36 REMARK 500 THR A 351 -59.01 0.22 REMARK 500 GLN A 353 -18.02 -36.57 REMARK 500 GLN A 360 -81.37 -46.18 REMARK 500 PRO A 367 -74.33 -33.88 REMARK 500 SER A 368 -2.70 -37.30 REMARK 500 LEU B1361 77.39 -112.98 REMARK 500 HIS B1362 86.69 -55.69 REMARK 500 ASP B1367 -81.98 -83.09 REMARK 500 ASP B1370 -99.00 14.88 REMARK 500 ASN B1371 51.45 -119.45 REMARK 500 SER B1372 -120.73 -88.43 REMARK 500 ILE B1373 -17.44 -144.93 REMARK 500 ALA B1383 -88.89 -42.30 REMARK 500 ASP B1385 -72.14 -40.99 REMARK 500 LEU B1386 -9.96 -54.50 REMARK 500 LYS B1389 10.39 -64.21 REMARK 500 VAL B1391 -79.52 -7.94 REMARK 500 PHE B1399 32.65 -97.04 REMARK 500 LEU B1407 -121.58 -139.36 REMARK 500 ALA B1408 -94.22 59.15 REMARK 500 SER B1409 -70.40 60.25 REMARK 500 LYS B1410 -31.24 -37.05 REMARK 500 ASP B1414 -6.53 -59.76 REMARK 500 ILE B1418 156.74 -48.21 REMARK 500 PHE B1429 -77.73 -142.45 REMARK 500 SER B1437 -79.46 -31.45 REMARK 500 LYS B1447 -25.37 -38.85 REMARK 500 ASN B1450 34.11 -74.36 REMARK 500 CYS B1451 66.62 2.19 REMARK 500 ASP B1452 175.92 -51.60 REMARK 500 PHE B1464 -73.69 -48.88 REMARK 500 LEU B1465 -4.60 -45.60 REMARK 500 ILE B1471 -78.66 -67.70 REMARK 500 GLU B1472 101.97 -34.63 REMARK 500 PRO B1483 -2.10 -53.65 REMARK 500 SER B1485 -156.62 -62.89 REMARK 500 TRP B1488 14.59 48.13 REMARK 500 VAL B1491 121.99 -14.85 REMARK 500 ASP B1496 -102.00 -54.47 REMARK 500 ALA B1497 -79.60 -6.28 REMARK 500 LYS B1498 27.37 40.38 REMARK 500 GLU B1501 -109.20 56.45 REMARK 500 LEU B1515 -76.11 -70.42 REMARK 500 GLN B1516 -10.83 -49.47 REMARK 500 VAL B1519 -83.00 -94.24 REMARK 500 GLU B1522 -77.44 -35.79 REMARK 500 SER B1523 -43.77 -17.37 REMARK 500 ALA B1531 -72.87 -74.01 REMARK 500 LEU B1532 -31.39 -39.69 REMARK 500 VAL B1535 -73.12 -42.86 REMARK 500 TYR B1538 -35.80 -22.37 REMARK 500 GLU B1539 -89.37 -56.52 REMARK 500 GLU B1541 13.76 -55.84 REMARK 500 TYR B1542 -61.98 -123.68 REMARK 500 VAL B1552 -72.05 -96.78 REMARK 500 ASP B1553 -32.61 -39.38 REMARK 500 LYS B1554 51.84 -107.78 REMARK 500 ALA B1555 -44.75 -159.61 REMARK 500 ALA B1558 -30.09 -38.67 REMARK 500 SER B1562 67.95 -173.26 REMARK 500 ASN B1564 -80.01 -45.42 REMARK 500 ALA B1586 132.50 -172.14 REMARK 500 GLN B1587 29.73 -74.83 REMARK 500 SER B1592 -9.43 -49.32 REMARK 500 ILE B1600 86.70 -55.33 REMARK 500 ASP B1602 -157.21 -86.15 REMARK 500 THR B1604 30.74 -71.90 REMARK 500 ASN B1605 46.33 25.09 REMARK 500 VAL B1617 -74.76 -62.39 REMARK 500 ASN B1620 -25.27 176.64 REMARK 500 TYR B1621 40.96 -154.89 REMARK 500 PRO B1622 29.09 -64.92 REMARK 500 ASN B1625 35.78 -66.54 REMARK 500 LEU B1628 25.07 -78.99 REMARK 500 SER B1629 -57.38 -141.15 REMARK 500 ASP B1636 10.66 -64.97 REMARK 500 VAL B1637 20.58 -151.51 REMARK 500 VAL B1657 6.20 -53.63 REMARK 500 GLU B1660 -77.96 -69.45 REMARK 500 ARG B1661 -38.66 -30.97 REMARK 500 GLU B1664 -76.53 -99.77 REMARK 500 ILE B1665 29.78 -77.72 REMARK 500 ASN B1667 -77.18 61.15 REMARK 500 LEU B1668 45.43 -97.86 REMARK 500 SER B1669 -70.58 -118.29 REMARK 500 ASP B1670 78.37 -54.62 REMARK 500 SER B1671 -0.11 -45.06 REMARK 500 PHE B1674 97.09 -59.42 REMARK 500 HIS B1675 110.36 -28.26 REMARK 500 PRO B1676 -53.36 -2.90 REMARK 500 ASP B1678 81.82 -47.25 REMARK 500 LYS B1679 35.29 -70.91 REMARK 500 THR B1684 -74.79 -69.69 REMARK 500 PRO B1689 -72.43 -59.22 REMARK 500 ALA B1691 -71.94 -45.37 REMARK 500 GLU B1699 -70.88 -43.99 REMARK 500 THR B1715 -76.43 -50.04 REMARK 500 SER B1720 -17.84 -44.00 REMARK 500 ASP B1722 87.31 -162.57 REMARK 500 LYS B1723 -56.05 -15.49 REMARK 500 PHE B1724 -80.59 -51.98 REMARK 500 LYS B1726 -39.60 -33.30 REMARK 500 SER B1728 2.89 -55.33 REMARK 500 PHE B1729 -74.73 -58.07 REMARK 500 ALA B1745 -72.08 -44.82 REMARK 500 ARG B1755 -43.99 -152.85 REMARK 500 TYR B1757 5.09 -68.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PHE A 127 20.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 382 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A2000 O3B REMARK 620 2 ATP A2000 O1B 49.2 REMARK 620 3 GLN A 137 NE2 138.5 120.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 382 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 2000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UX4 RELATED DB: PDB REMARK 900 UNCOMPLEXED BNIP FORMIN HOMOLOGY 2 DOMAIN REMARK 900 RELATED ID: 1UX5 RELATED DB: PDB REMARK 900 UNCOMPLEXED BNIP FORMIN HOMOLOGY 2 DOMAIN DBREF 1Y64 A 1 375 UNP P68135 ACTS_RABIT 3 377 DBREF 1Y64 B 1327 1769 UNP P41832 BNI1_YEAST 1327 1769 SEQADV 1Y64 HIC A 73 UNP P68135 HIS 75 MODIFIED RESIDUE SEQRES 1 A 375 ASP GLU ASP GLU THR THR ALA LEU VAL CYS ASP ASN GLY SEQRES 2 A 375 SER GLY LEU VAL LYS ALA GLY PHE ALA GLY ASP ASP ALA SEQRES 3 A 375 PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG PRO ARG SEQRES 4 A 375 HIS GLN GLY VAL MET VAL GLY MET GLY GLN LYS ASP SER SEQRES 5 A 375 TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY ILE LEU SEQRES 6 A 375 THR LEU LYS TYR PRO ILE GLU HIC GLY ILE ILE THR ASN SEQRES 7 A 375 TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR PHE TYR SEQRES 8 A 375 ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO THR LEU SEQRES 9 A 375 LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN ARG GLU SEQRES 10 A 375 LYS MET THR GLN ILE MET PHE GLU THR PHE ASN VAL PRO SEQRES 11 A 375 ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER LEU TYR SEQRES 12 A 375 ALA SER GLY ARG THR THR GLY ILE VAL LEU ASP SER GLY SEQRES 13 A 375 ASP GLY VAL THR HIS ASN VAL PRO ILE TYR GLU GLY TYR SEQRES 14 A 375 ALA LEU PRO HIS ALA ILE MET ARG LEU ASP LEU ALA GLY SEQRES 15 A 375 ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU THR GLU SEQRES 16 A 375 ARG GLY TYR SER PHE VAL THR THR ALA GLU ARG GLU ILE SEQRES 17 A 375 VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL ALA LEU SEQRES 18 A 375 ASP PHE GLU ASN GLU MET ALA THR ALA ALA SER SER SER SEQRES 19 A 375 SER LEU GLU LYS SER TYR GLU LEU PRO ASP GLY GLN VAL SEQRES 20 A 375 ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO GLU THR SEQRES 21 A 375 LEU PHE GLN PRO SER PHE ILE GLY MET GLU SER ALA GLY SEQRES 22 A 375 ILE HIS GLU THR THR TYR ASN SER ILE MET LYS CYS ASP SEQRES 23 A 375 ILE ASP ILE ARG LYS ASP LEU TYR ALA ASN ASN VAL MET SEQRES 24 A 375 SER GLY GLY THR THR MET TYR PRO GLY ILE ALA ASP ARG SEQRES 25 A 375 MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER THR MET SEQRES 26 A 375 LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS TYR SER SEQRES 27 A 375 VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SER THR SEQRES 28 A 375 PHE GLN GLN MET TRP ILE THR LYS GLN GLU TYR ASP GLU SEQRES 29 A 375 ALA GLY PRO SER ILE VAL HIS ARG LYS CYS PHE SEQRES 1 B 443 MET PRO ALA SER GLN ILE LYS SER ALA VAL THR SER PRO SEQRES 2 B 443 LEU LEU PRO GLN SER PRO SER LEU PHE GLU LYS TYR PRO SEQRES 3 B 443 ARG PRO HIS LYS LYS LEU LYS GLN LEU HIS TRP GLU LYS SEQRES 4 B 443 LEU ASP CYS THR ASP ASN SER ILE TRP GLY THR GLY LYS SEQRES 5 B 443 ALA GLU LYS PHE ALA ASP ASP LEU TYR GLU LYS GLY VAL SEQRES 6 B 443 LEU ALA ASP LEU GLU LYS ALA PHE ALA ALA ARG GLU ILE SEQRES 7 B 443 LYS SER LEU ALA SER LYS ARG LYS GLU ASP LEU GLN LYS SEQRES 8 B 443 ILE THR PHE LEU SER ARG ASP ILE SER GLN GLN PHE GLY SEQRES 9 B 443 ILE ASN LEU HIS MET TYR SER SER LEU SER VAL ALA ASP SEQRES 10 B 443 LEU VAL LYS LYS ILE LEU ASN CYS ASP ARG ASP PHE LEU SEQRES 11 B 443 GLN THR PRO SER VAL VAL GLU PHE LEU SER LYS SER GLU SEQRES 12 B 443 ILE ILE GLU VAL SER VAL ASN LEU ALA ARG ASN TYR ALA SEQRES 13 B 443 PRO TYR SER THR ASP TRP GLU GLY VAL ARG ASN LEU GLU SEQRES 14 B 443 ASP ALA LYS PRO PRO GLU LYS ASP PRO ASN ASP LEU GLN SEQRES 15 B 443 ARG ALA ASP GLN ILE TYR LEU GLN LEU MET VAL ASN LEU SEQRES 16 B 443 GLU SER TYR TRP GLY SER ARG MET ARG ALA LEU THR VAL SEQRES 17 B 443 VAL THR SER TYR GLU ARG GLU TYR ASN GLU LEU LEU ALA SEQRES 18 B 443 LYS LEU ARG LYS VAL ASP LYS ALA VAL SER ALA LEU GLN SEQRES 19 B 443 GLU SER ASP ASN LEU ARG ASN VAL PHE ASN VAL ILE LEU SEQRES 20 B 443 ALA VAL GLY ASN PHE MET ASN ASP THR SER LYS GLN ALA SEQRES 21 B 443 GLN GLY PHE LYS LEU SER THR LEU GLN ARG LEU THR PHE SEQRES 22 B 443 ILE LYS ASP THR THR ASN SER MET THR PHE LEU ASN TYR SEQRES 23 B 443 VAL GLU LYS ILE VAL ARG LEU ASN TYR PRO SER PHE ASN SEQRES 24 B 443 ASP PHE LEU SER GLU LEU GLU PRO VAL LEU ASP VAL VAL SEQRES 25 B 443 LYS VAL SER ILE GLU GLN LEU VAL ASN ASP CYS LYS ASP SEQRES 26 B 443 PHE SER GLN SER ILE VAL ASN VAL GLU ARG SER VAL GLU SEQRES 27 B 443 ILE GLY ASN LEU SER ASP SER SER LYS PHE HIS PRO LEU SEQRES 28 B 443 ASP LYS VAL LEU ILE LYS THR LEU PRO VAL LEU PRO GLU SEQRES 29 B 443 ALA ARG LYS LYS GLY ASP LEU LEU GLU ASP GLU VAL LYS SEQRES 30 B 443 LEU THR ILE MET GLU PHE GLU SER LEU MET HIS THR TYR SEQRES 31 B 443 GLY GLU ASP SER GLY ASP LYS PHE ALA LYS ILE SER PHE SEQRES 32 B 443 PHE LYS LYS PHE ALA ASP PHE ILE ASN GLU TYR LYS LYS SEQRES 33 B 443 ALA GLN ALA GLN ASN LEU ALA ALA GLU GLU GLU GLU ARG SEQRES 34 B 443 LEU TYR ILE LYS HIS LYS LYS ILE VAL GLU GLU GLN GLN SEQRES 35 B 443 LYS MODRES 1Y64 HIC A 73 HIS 4-METHYL-HISTIDINE HET HIC A 73 11 HET CA A 382 1 HET ATP A2000 31 HETNAM HIC 4-METHYL-HISTIDINE HETNAM CA CALCIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 1 HIC C7 H11 N3 O2 FORMUL 3 CA CA 2+ FORMUL 4 ATP C10 H16 N5 O13 P3 HELIX 1 1 ASN A 78 PHE A 90 1 13 HELIX 2 2 PRO A 112 PHE A 127 1 16 HELIX 3 3 GLN A 137 ALA A 144 1 8 HELIX 4 4 LEU A 171 ILE A 175 5 5 HELIX 5 5 ALA A 181 GLU A 195 1 15 HELIX 6 6 THR A 203 ILE A 208 1 6 HELIX 7 7 VAL A 209 LYS A 215 1 7 HELIX 8 8 PRO A 258 GLN A 263 1 6 HELIX 9 9 PRO A 264 GLY A 268 5 5 HELIX 10 10 GLY A 273 MET A 283 1 11 HELIX 11 11 ASP A 286 ASN A 296 1 11 HELIX 12 12 GLY A 301 MET A 305 5 5 HELIX 13 13 ILE A 309 ALA A 321 1 13 HELIX 14 14 GLU A 334 LYS A 336 5 3 HELIX 15 15 TYR A 337 LEU A 349 1 13 HELIX 16 16 SER A 350 TRP A 356 5 7 HELIX 17 17 THR A 358 GLY A 366 1 9 HELIX 18 18 PRO A 367 VAL A 370 5 4 HELIX 19 19 GLY B 1377 LYS B 1389 1 13 HELIX 20 20 VAL B 1391 PHE B 1399 1 9 HELIX 21 21 SER B 1422 ILE B 1431 1 10 HELIX 22 22 ASN B 1432 TYR B 1436 5 5 HELIX 23 23 SER B 1440 ASN B 1450 1 11 HELIX 24 24 THR B 1458 LEU B 1465 1 8 HELIX 25 25 LYS B 1467 GLU B 1472 1 6 HELIX 26 26 SER B 1474 ALA B 1482 1 9 HELIX 27 27 PRO B 1483 SER B 1485 5 3 HELIX 28 28 ASP B 1503 LEU B 1507 5 5 HELIX 29 29 GLN B 1508 VAL B 1519 1 12 HELIX 30 30 LEU B 1521 TYR B 1538 1 18 HELIX 31 31 GLU B 1539 GLU B 1561 1 23 HELIX 32 32 SER B 1562 ASN B 1580 1 19 HELIX 33 33 ASP B 1581 GLN B 1585 5 5 HELIX 34 34 LYS B 1590 LEU B 1597 5 8 HELIX 35 35 THR B 1608 LEU B 1619 1 12 HELIX 36 36 ASP B 1626 LEU B 1631 1 6 HELIX 37 37 LEU B 1631 ASP B 1636 1 6 HELIX 38 38 SER B 1641 ILE B 1665 1 25 HELIX 39 39 VAL B 1680 LEU B 1685 1 6 HELIX 40 40 VAL B 1687 GLY B 1717 1 31 HELIX 41 41 ASP B 1722 HIS B 1760 1 39 SHEET 1 A 5 VAL A 30 PRO A 32 0 SHEET 2 A 5 LEU A 16 PHE A 21 -1 N VAL A 17 O PHE A 31 SHEET 3 A 5 LEU A 8 CYS A 10 -1 N VAL A 9 O GLY A 20 SHEET 4 A 5 THR A 103 GLU A 107 1 O LEU A 104 N CYS A 10 SHEET 5 A 5 MET A 132 ILE A 136 1 O ALA A 135 N LEU A 105 SHEET 1 B 3 TYR A 53 VAL A 54 0 SHEET 2 B 3 VAL A 35 PRO A 38 -1 N GLY A 36 O TYR A 53 SHEET 3 B 3 LEU A 65 LYS A 68 -1 O THR A 66 N ARG A 37 SHEET 1 C 2 ILE A 71 GLU A 72 0 SHEET 2 C 2 ILE A 75 ILE A 76 -1 O ILE A 75 N GLU A 72 SHEET 1 D 4 MET A 176 LEU A 178 0 SHEET 2 D 4 THR A 160 VAL A 163 -1 N ASN A 162 O MET A 176 SHEET 3 D 4 VAL A 152 ASP A 154 -1 N VAL A 152 O VAL A 163 SHEET 4 D 4 VAL A 298 SER A 300 1 O SER A 300 N LEU A 153 SHEET 1 E 2 LYS A 238 GLU A 241 0 SHEET 2 E 2 VAL A 247 ILE A 250 -1 O ILE A 250 N LYS A 238 LINK C GLU A 72 N HIC A 73 1555 1555 1.32 LINK C HIC A 73 N GLY A 74 1555 1555 1.33 LINK CA CA A 382 O3B ATP A2000 1555 1555 2.67 LINK CA CA A 382 O1B ATP A2000 1555 1555 3.24 LINK CA CA A 382 NE2 GLN A 137 1555 1555 2.95 SITE 1 AC1 2 GLN A 137 ATP A2000 SITE 1 AC2 17 GLY A 13 SER A 14 GLY A 15 LEU A 16 SITE 2 AC2 17 LYS A 18 GLY A 156 ASP A 157 GLY A 158 SITE 3 AC2 17 VAL A 159 GLY A 182 LYS A 213 GLU A 214 SITE 4 AC2 17 GLY A 302 THR A 303 MET A 305 TYR A 306 SITE 5 AC2 17 CA A 382 CRYST1 231.997 56.229 100.945 90.00 107.70 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004310 0.000000 0.001375 0.00000 SCALE2 0.000000 0.017784 -0.000001 0.00000 SCALE3 0.000000 0.000000 0.010399 0.00000