data_1Y7M # _entry.id 1Y7M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Y7M pdb_00001y7m 10.2210/pdb1y7m/pdb RCSB RCSB031217 ? ? WWPDB D_1000031217 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC1283 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Y7M _pdbx_database_status.recvd_initial_deposition_date 2004-12-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bielnicki, J.A.' 1 'Devedjiev, Y.' 2 'Derewenda, U.' 3 'Dauter, Z.' 4 'Joachimiak, A.' 5 'Derewenda, Z.S.' 6 'Midwest Center for Structural Genomics (MCSG)' 7 # _citation.id primary _citation.title ;B. subtilis ykuD protein at 2.0 A resolution: insights into the structure and function of a novel, ubiquitous family of bacterial enzymes. ; _citation.journal_abbrev Proteins _citation.journal_volume 62 _citation.page_first 144 _citation.page_last 151 _citation.year 2006 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16287140 _citation.pdbx_database_id_DOI 10.1002/prot.20702 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bielnicki, J.' 1 ? primary 'Devedjiev, Y.' 2 ? primary 'Derewenda, U.' 3 ? primary 'Dauter, Z.' 4 ? primary 'Joachimiak, A.' 5 ? primary 'Derewenda, Z.S.' 6 ? # _cell.entry_id 1Y7M _cell.length_a 56.276 _cell.length_b 63.910 _cell.length_c 93.679 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y7M _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein BSU14040' 17687.861 2 ? 'K117A, Q118A' ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 water nat water 18.015 156 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)LTYQVKQGDTLNSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSLNNRV (MSE)KTYPIAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSAAHYGIHGTNNPASIGKAVSKGCIR(MSE)HNKDV IELASIVPNGTRVTINR ; _entity_poly.pdbx_seq_one_letter_code_can ;MLTYQVKQGDTLNSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSLNNRVMKTYP IAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSAAHYGIHGTNNPASIGKAVSKGCIRMHNKDVIELASIVPNGTRV TINR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC1283 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 LEU n 1 3 THR n 1 4 TYR n 1 5 GLN n 1 6 VAL n 1 7 LYS n 1 8 GLN n 1 9 GLY n 1 10 ASP n 1 11 THR n 1 12 LEU n 1 13 ASN n 1 14 SER n 1 15 ILE n 1 16 ALA n 1 17 ALA n 1 18 ASP n 1 19 PHE n 1 20 ARG n 1 21 ILE n 1 22 SER n 1 23 THR n 1 24 ALA n 1 25 ALA n 1 26 LEU n 1 27 LEU n 1 28 GLN n 1 29 ALA n 1 30 ASN n 1 31 PRO n 1 32 SER n 1 33 LEU n 1 34 GLN n 1 35 ALA n 1 36 GLY n 1 37 LEU n 1 38 THR n 1 39 ALA n 1 40 GLY n 1 41 GLN n 1 42 SER n 1 43 ILE n 1 44 VAL n 1 45 ILE n 1 46 PRO n 1 47 GLY n 1 48 LEU n 1 49 PRO n 1 50 ASP n 1 51 PRO n 1 52 TYR n 1 53 THR n 1 54 ILE n 1 55 PRO n 1 56 TYR n 1 57 HIS n 1 58 ILE n 1 59 ALA n 1 60 VAL n 1 61 SER n 1 62 ILE n 1 63 GLY n 1 64 ALA n 1 65 LYS n 1 66 THR n 1 67 LEU n 1 68 THR n 1 69 LEU n 1 70 SER n 1 71 LEU n 1 72 ASN n 1 73 ASN n 1 74 ARG n 1 75 VAL n 1 76 MSE n 1 77 LYS n 1 78 THR n 1 79 TYR n 1 80 PRO n 1 81 ILE n 1 82 ALA n 1 83 VAL n 1 84 GLY n 1 85 LYS n 1 86 ILE n 1 87 LEU n 1 88 THR n 1 89 GLN n 1 90 THR n 1 91 PRO n 1 92 THR n 1 93 GLY n 1 94 GLU n 1 95 PHE n 1 96 TYR n 1 97 ILE n 1 98 ILE n 1 99 ASN n 1 100 ARG n 1 101 GLN n 1 102 ARG n 1 103 ASN n 1 104 PRO n 1 105 GLY n 1 106 GLY n 1 107 PRO n 1 108 PHE n 1 109 GLY n 1 110 ALA n 1 111 TYR n 1 112 TRP n 1 113 LEU n 1 114 SER n 1 115 LEU n 1 116 SER n 1 117 ALA n 1 118 ALA n 1 119 HIS n 1 120 TYR n 1 121 GLY n 1 122 ILE n 1 123 HIS n 1 124 GLY n 1 125 THR n 1 126 ASN n 1 127 ASN n 1 128 PRO n 1 129 ALA n 1 130 SER n 1 131 ILE n 1 132 GLY n 1 133 LYS n 1 134 ALA n 1 135 VAL n 1 136 SER n 1 137 LYS n 1 138 GLY n 1 139 CYS n 1 140 ILE n 1 141 ARG n 1 142 MSE n 1 143 HIS n 1 144 ASN n 1 145 LYS n 1 146 ASP n 1 147 VAL n 1 148 ILE n 1 149 GLU n 1 150 LEU n 1 151 ALA n 1 152 SER n 1 153 ILE n 1 154 VAL n 1 155 PRO n 1 156 ASN n 1 157 GLY n 1 158 THR n 1 159 ARG n 1 160 VAL n 1 161 THR n 1 162 ILE n 1 163 ASN n 1 164 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene ykud _entity_src_gen.gene_src_species 'Bacillus subtilis' _entity_src_gen.gene_src_strain 'subsp. subtilis str. 168' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis subsp. subtilis str. 168' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O34816_BACSU _struct_ref.pdbx_db_accession O34816 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLTYQVKQGDTLNSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSLNNRVMKTYP IAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSKQHYGIHGTNNPASIGKAVSKGCIRMHNKDVIELASIVPNGTRV TINR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1Y7M A 1 ? 164 ? O34816 1 ? 164 ? 1 164 2 1 1Y7M B 1 ? 164 ? O34816 1 ? 164 ? 1 164 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1Y7M MSE A 1 ? UNP O34816 MET 1 'modified residue' 1 1 1 1Y7M MSE A 76 ? UNP O34816 MET 76 'modified residue' 76 2 1 1Y7M ALA A 117 ? UNP O34816 LYS 117 'engineered mutation' 117 3 1 1Y7M ALA A 118 ? UNP O34816 GLN 118 'engineered mutation' 118 4 1 1Y7M MSE A 142 ? UNP O34816 MET 142 'modified residue' 142 5 2 1Y7M MSE B 1 ? UNP O34816 MET 1 'modified residue' 1 6 2 1Y7M MSE B 76 ? UNP O34816 MET 76 'modified residue' 76 7 2 1Y7M ALA B 117 ? UNP O34816 LYS 117 'engineered mutation' 117 8 2 1Y7M ALA B 118 ? UNP O34816 GLN 118 'engineered mutation' 118 9 2 1Y7M MSE B 142 ? UNP O34816 MET 142 'modified residue' 142 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1Y7M _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.4 _exptl_crystal.density_percent_sol 48.5 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 294.1 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.90 _exptl_crystal_grow.pdbx_details 'PEG 3350, acetate, lithium sulfate, cadmium chloride, pH 4.9, VAPOR DIFFUSION, SITTING DROP, temperature 294.1K, pH 4.90' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 77.3 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-04-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97946 1.0 2 0.97919 1.0 3 0.97178 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X9B' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X9B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97946, 0.97919, 0.97178' # _reflns.entry_id 1Y7M _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.050 _reflns.number_obs 21805 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.5000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs 0.459 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.800 _reflns_shell.pdbx_redundancy 2.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1Y7M _refine.ls_number_reflns_obs 20691 _refine.ls_number_reflns_all 21805 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.214 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.211 _refine.ls_R_factor_R_free 0.27 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1114 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.911 _refine.B_iso_mean 23.60 _refine.aniso_B[1][1] 4.23000 _refine.aniso_B[2][2] -1.75000 _refine.aniso_B[3][3] -2.48000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.220 _refine.pdbx_overall_ESU_R_Free 0.199 _refine.overall_SU_ML 0.151 _refine.overall_SU_B 5.514 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2468 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 2646 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.021 ? 2463 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2263 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.441 1.960 ? 3363 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.854 3.000 ? 5241 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.449 5.000 ? 324 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 396 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2731 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 458 'X-RAY DIFFRACTION' ? r_nbd_refined 0.206 0.200 ? 468 'X-RAY DIFFRACTION' ? r_nbd_other 0.237 0.200 ? 2647 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.084 0.200 ? 1524 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.189 0.200 ? 133 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.184 0.200 ? 21 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.225 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.204 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.548 1.500 ? 1617 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.968 2.000 ? 2605 'X-RAY DIFFRACTION' ? r_scbond_it 1.872 3.000 ? 846 'X-RAY DIFFRACTION' ? r_scangle_it 2.900 4.500 ? 758 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.05 _refine_ls_shell.d_res_low 2.12 _refine_ls_shell.number_reflns_R_work 1513 _refine_ls_shell.R_factor_R_work 0.256 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.284 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1Y7M _struct.title 'Crystal Structure of the B. subtilis YkuD protein at 2 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Y7M _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;surface mutagenesis, cysteine proteases, cell wall catabolism, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? PHE A 19 ? THR A 11 PHE A 19 1 ? 9 HELX_P HELX_P2 2 ASP A 50 ? ILE A 54 ? ASP A 50 ILE A 54 5 ? 5 HELX_P HELX_P3 3 GLY A 105 ? GLY A 109 ? GLY A 105 GLY A 109 5 ? 5 HELX_P HELX_P4 4 ASN A 127 ? ILE A 131 ? ASN A 127 ILE A 131 5 ? 5 HELX_P HELX_P5 5 HIS A 143 ? VAL A 154 ? HIS A 143 VAL A 154 1 ? 12 HELX_P HELX_P6 6 THR B 11 ? PHE B 19 ? THR B 11 PHE B 19 1 ? 9 HELX_P HELX_P7 7 ASP B 50 ? ILE B 54 ? ASP B 50 ILE B 54 5 ? 5 HELX_P HELX_P8 8 GLY B 105 ? GLY B 109 ? GLY B 105 GLY B 109 5 ? 5 HELX_P HELX_P9 9 ASN B 127 ? ILE B 131 ? ASN B 127 ILE B 131 5 ? 5 HELX_P HELX_P10 10 HIS B 143 ? VAL B 154 ? HIS B 143 VAL B 154 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 1 C ? ? ? 1_555 A LEU 2 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale2 covale both ? A VAL 75 C ? ? ? 1_555 A MSE 76 N ? ? A VAL 75 A MSE 76 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A MSE 76 C ? ? ? 1_555 A LYS 77 N ? ? A MSE 76 A LYS 77 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A ARG 141 C ? ? ? 1_555 A MSE 142 N ? ? A ARG 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A MSE 142 C ? ? ? 1_555 A HIS 143 N ? ? A MSE 142 A HIS 143 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale6 covale both ? B MSE 1 C ? ? ? 1_555 B LEU 2 N ? ? B MSE 1 B LEU 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? B VAL 75 C ? ? ? 1_555 B MSE 76 N ? ? B VAL 75 B MSE 76 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale8 covale both ? B MSE 76 C ? ? ? 1_555 B LYS 77 N ? ? B MSE 76 B LYS 77 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale9 covale both ? B ARG 141 C ? ? ? 1_555 B MSE 142 N ? ? B ARG 141 B MSE 142 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale both ? B MSE 142 C ? ? ? 1_555 B HIS 143 N ? ? B MSE 142 B HIS 143 1_555 ? ? ? ? ? ? ? 1.330 ? ? metalc1 metalc ? ? A HIS 119 NE2 ? ? ? 4_455 E CD . CD ? ? A HIS 119 B CD 202 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc2 metalc ? ? A CYS 139 SG ? ? ? 1_555 C CD . CD ? ? A CYS 139 A CD 201 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc3 metalc ? ? C CD . CD ? ? ? 1_555 D SO4 . O4 ? ? A CD 201 A SO4 203 1_555 ? ? ? ? ? ? ? 2.759 ? ? metalc4 metalc ? ? C CD . CD ? ? ? 1_555 D SO4 . O2 ? ? A CD 201 A SO4 203 1_555 ? ? ? ? ? ? ? 2.571 ? ? metalc5 metalc ? ? C CD . CD ? ? ? 1_555 D SO4 . S ? ? A CD 201 A SO4 203 1_555 ? ? ? ? ? ? ? 3.141 ? ? metalc6 metalc ? ? C CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 201 A HOH 204 1_555 ? ? ? ? ? ? ? 2.658 ? ? metalc7 metalc ? ? C CD . CD ? ? ? 1_555 B HIS 119 NE2 ? ? A CD 201 B HIS 119 4_555 ? ? ? ? ? ? ? 2.267 ? ? metalc8 metalc ? ? B CYS 139 SG ? ? ? 1_555 E CD . CD ? ? B CYS 139 B CD 202 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc9 metalc ? ? E CD . CD ? ? ? 1_555 F SO4 . S ? ? B CD 202 B SO4 204 1_555 ? ? ? ? ? ? ? 3.115 ? ? metalc10 metalc ? ? E CD . CD ? ? ? 1_555 F SO4 . O3 ? ? B CD 202 B SO4 204 1_555 ? ? ? ? ? ? ? 2.516 ? ? metalc11 metalc ? ? E CD . CD ? ? ? 1_555 F SO4 . O1 ? ? B CD 202 B SO4 204 1_555 ? ? ? ? ? ? ? 2.697 ? ? metalc12 metalc ? ? E CD . CD ? ? ? 1_555 J HOH . O ? ? B CD 202 B HOH 207 1_555 ? ? ? ? ? ? ? 2.622 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 25 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 25 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 LEU _struct_mon_prot_cis.pdbx_label_seq_id_2 26 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 LEU _struct_mon_prot_cis.pdbx_auth_seq_id_2 26 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 10.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 8 ? C ? 2 ? D ? 2 ? E ? 8 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? parallel C 1 2 ? parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel E 6 7 ? anti-parallel E 7 8 ? parallel F 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 2 ? GLN A 5 ? LEU A 2 GLN A 5 A 2 SER A 42 ? ILE A 45 ? SER A 42 ILE A 45 B 1 ARG A 74 ? PRO A 80 ? ARG A 74 PRO A 80 B 2 THR A 66 ? LEU A 71 ? THR A 66 LEU A 71 B 3 TYR A 56 ? SER A 61 ? TYR A 56 SER A 61 B 4 ARG A 159 ? ASN A 163 ? ARG A 159 ASN A 163 B 5 GLY A 93 ? ARG A 102 ? GLY A 93 ARG A 102 B 6 TYR A 111 ? LEU A 115 ? TYR A 111 LEU A 115 B 7 GLY A 121 ? HIS A 123 ? GLY A 121 HIS A 123 B 8 ILE A 140 ? ARG A 141 ? ILE A 140 ARG A 141 C 1 VAL A 83 ? GLY A 84 ? VAL A 83 GLY A 84 C 2 ALA A 134 ? SER A 136 ? ALA A 134 SER A 136 D 1 LEU B 2 ? GLN B 5 ? LEU B 2 GLN B 5 D 2 SER B 42 ? ILE B 45 ? SER B 42 ILE B 45 E 1 ARG B 74 ? PRO B 80 ? ARG B 74 PRO B 80 E 2 THR B 66 ? LEU B 71 ? THR B 66 LEU B 71 E 3 TYR B 56 ? SER B 61 ? TYR B 56 SER B 61 E 4 ARG B 159 ? ASN B 163 ? ARG B 159 ASN B 163 E 5 GLY B 93 ? ARG B 102 ? GLY B 93 ARG B 102 E 6 TYR B 111 ? LEU B 115 ? TYR B 111 LEU B 115 E 7 GLY B 121 ? HIS B 123 ? GLY B 121 HIS B 123 E 8 ILE B 140 ? ARG B 141 ? ILE B 140 ARG B 141 F 1 VAL B 83 ? GLY B 84 ? VAL B 83 GLY B 84 F 2 ALA B 134 ? SER B 136 ? ALA B 134 SER B 136 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 4 ? N TYR A 4 O ILE A 43 ? O ILE A 43 B 1 2 O MSE A 76 ? O MSE A 76 N LEU A 69 ? N LEU A 69 B 2 3 O THR A 68 ? O THR A 68 N ALA A 59 ? N ALA A 59 B 3 4 N ILE A 58 ? N ILE A 58 O ARG A 159 ? O ARG A 159 B 4 5 O VAL A 160 ? O VAL A 160 N PHE A 95 ? N PHE A 95 B 5 6 N ILE A 98 ? N ILE A 98 O SER A 114 ? O SER A 114 B 6 7 N LEU A 113 ? N LEU A 113 O ILE A 122 ? O ILE A 122 B 7 8 N HIS A 123 ? N HIS A 123 O ILE A 140 ? O ILE A 140 C 1 2 N VAL A 83 ? N VAL A 83 O SER A 136 ? O SER A 136 D 1 2 N LEU B 2 ? N LEU B 2 O ILE B 45 ? O ILE B 45 E 1 2 O MSE B 76 ? O MSE B 76 N LEU B 69 ? N LEU B 69 E 2 3 O THR B 68 ? O THR B 68 N ALA B 59 ? N ALA B 59 E 3 4 N VAL B 60 ? N VAL B 60 O THR B 161 ? O THR B 161 E 4 5 O ILE B 162 ? O ILE B 162 N GLY B 93 ? N GLY B 93 E 5 6 N ILE B 98 ? N ILE B 98 O SER B 114 ? O SER B 114 E 6 7 N LEU B 113 ? N LEU B 113 O ILE B 122 ? O ILE B 122 E 7 8 N HIS B 123 ? N HIS B 123 O ILE B 140 ? O ILE B 140 F 1 2 N VAL B 83 ? N VAL B 83 O SER B 136 ? O SER B 136 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CD 201 ? 4 'BINDING SITE FOR RESIDUE CD A 201' AC2 Software B CD 202 ? 4 'BINDING SITE FOR RESIDUE CD B 202' AC3 Software A SO4 203 ? 8 'BINDING SITE FOR RESIDUE SO4 A 203' AC4 Software B SO4 204 ? 8 'BINDING SITE FOR RESIDUE SO4 B 204' AC5 Software B SO4 205 ? 4 'BINDING SITE FOR RESIDUE SO4 B 205' AC6 Software B SO4 206 ? 4 'BINDING SITE FOR RESIDUE SO4 B 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 139 ? CYS A 139 . ? 1_555 ? 2 AC1 4 SO4 D . ? SO4 A 203 . ? 1_555 ? 3 AC1 4 HOH I . ? HOH A 204 . ? 1_555 ? 4 AC1 4 HIS B 119 ? HIS B 119 . ? 4_555 ? 5 AC2 4 HIS A 119 ? HIS A 119 . ? 4_455 ? 6 AC2 4 CYS B 139 ? CYS B 139 . ? 1_555 ? 7 AC2 4 SO4 F . ? SO4 B 204 . ? 1_555 ? 8 AC2 4 HOH J . ? HOH B 207 . ? 1_555 ? 9 AC3 8 HIS A 123 ? HIS A 123 . ? 1_555 ? 10 AC3 8 SER A 136 ? SER A 136 . ? 1_555 ? 11 AC3 8 LYS A 137 ? LYS A 137 . ? 1_555 ? 12 AC3 8 GLY A 138 ? GLY A 138 . ? 1_555 ? 13 AC3 8 CYS A 139 ? CYS A 139 . ? 1_555 ? 14 AC3 8 ARG A 141 ? ARG A 141 . ? 1_555 ? 15 AC3 8 CD C . ? CD A 201 . ? 1_555 ? 16 AC3 8 HIS B 119 ? HIS B 119 . ? 4_555 ? 17 AC4 8 HIS A 119 ? HIS A 119 . ? 4_455 ? 18 AC4 8 HIS B 123 ? HIS B 123 . ? 1_555 ? 19 AC4 8 SER B 136 ? SER B 136 . ? 1_555 ? 20 AC4 8 LYS B 137 ? LYS B 137 . ? 1_555 ? 21 AC4 8 GLY B 138 ? GLY B 138 . ? 1_555 ? 22 AC4 8 CYS B 139 ? CYS B 139 . ? 1_555 ? 23 AC4 8 ARG B 141 ? ARG B 141 . ? 1_555 ? 24 AC4 8 CD E . ? CD B 202 . ? 1_555 ? 25 AC5 4 ARG A 159 ? ARG A 159 . ? 1_555 ? 26 AC5 4 HOH I . ? HOH A 238 . ? 1_555 ? 27 AC5 4 TYR B 96 ? TYR B 96 . ? 1_555 ? 28 AC5 4 ARG B 159 ? ARG B 159 . ? 1_555 ? 29 AC6 4 ASN A 144 ? ASN A 144 . ? 1_545 ? 30 AC6 4 LYS B 145 ? LYS B 145 . ? 1_555 ? 31 AC6 4 HOH J . ? HOH B 211 . ? 1_555 ? 32 AC6 4 HOH J . ? HOH B 225 . ? 1_555 ? # _database_PDB_matrix.entry_id 1Y7M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Y7M _atom_sites.fract_transf_matrix[1][1] 0.017770 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015647 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010675 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD N O S SE # loop_ _database_PDB_caveat.text 'CHIRALITY ERROR AT CHIRAL CENTER CA OF LEU 37A, ASN 30A,B.' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 MSE 76 76 76 MSE MSE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 TRP 112 112 112 TRP TRP A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 TYR 120 120 120 TYR TYR A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 CYS 139 139 139 CYS CYS A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 MSE 142 142 142 MSE MSE A . n A 1 143 HIS 143 143 143 HIS HIS A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 ARG 159 159 159 ARG ARG A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 THR 161 161 161 THR THR A . n A 1 162 ILE 162 162 162 ILE ILE A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 ARG 164 164 164 ARG ARG A . n B 1 1 MSE 1 1 1 MSE MSE B . n B 1 2 LEU 2 2 2 LEU LEU B . n B 1 3 THR 3 3 3 THR THR B . n B 1 4 TYR 4 4 4 TYR TYR B . n B 1 5 GLN 5 5 5 GLN GLN B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 GLN 8 8 8 GLN GLN B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 ASP 10 10 10 ASP ASP B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 SER 14 14 14 SER SER B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 ALA 16 16 16 ALA ALA B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 ASP 18 18 18 ASP ASP B . n B 1 19 PHE 19 19 19 PHE PHE B . n B 1 20 ARG 20 20 20 ARG ARG B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 SER 22 22 22 SER SER B . n B 1 23 THR 23 23 23 THR THR B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 GLN 28 28 28 GLN GLN B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 ASN 30 30 30 ASN ASN B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 SER 32 32 32 SER SER B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 GLN 34 34 34 GLN GLN B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 THR 38 38 38 THR THR B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 SER 42 42 42 SER SER B . n B 1 43 ILE 43 43 43 ILE ILE B . n B 1 44 VAL 44 44 44 VAL VAL B . n B 1 45 ILE 45 45 45 ILE ILE B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 PRO 49 49 49 PRO PRO B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 PRO 51 51 51 PRO PRO B . n B 1 52 TYR 52 52 52 TYR TYR B . n B 1 53 THR 53 53 53 THR THR B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 TYR 56 56 56 TYR TYR B . n B 1 57 HIS 57 57 57 HIS HIS B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 SER 61 61 61 SER SER B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 LYS 65 65 65 LYS LYS B . n B 1 66 THR 66 66 66 THR THR B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 THR 68 68 68 THR THR B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 SER 70 70 70 SER SER B . n B 1 71 LEU 71 71 71 LEU LEU B . n B 1 72 ASN 72 72 72 ASN ASN B . n B 1 73 ASN 73 73 73 ASN ASN B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 MSE 76 76 76 MSE MSE B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 THR 78 78 78 THR THR B . n B 1 79 TYR 79 79 79 TYR TYR B . n B 1 80 PRO 80 80 80 PRO PRO B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 VAL 83 83 83 VAL VAL B . n B 1 84 GLY 84 84 84 GLY GLY B . n B 1 85 LYS 85 85 85 LYS LYS B . n B 1 86 ILE 86 86 86 ILE ILE B . n B 1 87 LEU 87 87 87 LEU LEU B . n B 1 88 THR 88 88 88 THR THR B . n B 1 89 GLN 89 89 89 GLN GLN B . n B 1 90 THR 90 90 90 THR THR B . n B 1 91 PRO 91 91 91 PRO PRO B . n B 1 92 THR 92 92 92 THR THR B . n B 1 93 GLY 93 93 93 GLY GLY B . n B 1 94 GLU 94 94 94 GLU GLU B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 TYR 96 96 96 TYR TYR B . n B 1 97 ILE 97 97 97 ILE ILE B . n B 1 98 ILE 98 98 98 ILE ILE B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 ARG 100 100 100 ARG ARG B . n B 1 101 GLN 101 101 101 GLN GLN B . n B 1 102 ARG 102 102 102 ARG ARG B . n B 1 103 ASN 103 103 103 ASN ASN B . n B 1 104 PRO 104 104 104 PRO PRO B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 GLY 106 106 106 GLY GLY B . n B 1 107 PRO 107 107 107 PRO PRO B . n B 1 108 PHE 108 108 108 PHE PHE B . n B 1 109 GLY 109 109 109 GLY GLY B . n B 1 110 ALA 110 110 110 ALA ALA B . n B 1 111 TYR 111 111 111 TYR TYR B . n B 1 112 TRP 112 112 112 TRP TRP B . n B 1 113 LEU 113 113 113 LEU LEU B . n B 1 114 SER 114 114 114 SER SER B . n B 1 115 LEU 115 115 115 LEU LEU B . n B 1 116 SER 116 116 116 SER SER B . n B 1 117 ALA 117 117 117 ALA ALA B . n B 1 118 ALA 118 118 118 ALA ALA B . n B 1 119 HIS 119 119 119 HIS HIS B . n B 1 120 TYR 120 120 120 TYR TYR B . n B 1 121 GLY 121 121 121 GLY GLY B . n B 1 122 ILE 122 122 122 ILE ILE B . n B 1 123 HIS 123 123 123 HIS HIS B . n B 1 124 GLY 124 124 124 GLY GLY B . n B 1 125 THR 125 125 125 THR THR B . n B 1 126 ASN 126 126 126 ASN ASN B . n B 1 127 ASN 127 127 127 ASN ASN B . n B 1 128 PRO 128 128 128 PRO PRO B . n B 1 129 ALA 129 129 129 ALA ALA B . n B 1 130 SER 130 130 130 SER SER B . n B 1 131 ILE 131 131 131 ILE ILE B . n B 1 132 GLY 132 132 132 GLY GLY B . n B 1 133 LYS 133 133 133 LYS LYS B . n B 1 134 ALA 134 134 134 ALA ALA B . n B 1 135 VAL 135 135 135 VAL VAL B . n B 1 136 SER 136 136 136 SER SER B . n B 1 137 LYS 137 137 137 LYS LYS B . n B 1 138 GLY 138 138 138 GLY GLY B . n B 1 139 CYS 139 139 139 CYS CYS B . n B 1 140 ILE 140 140 140 ILE ILE B . n B 1 141 ARG 141 141 141 ARG ARG B . n B 1 142 MSE 142 142 142 MSE MSE B . n B 1 143 HIS 143 143 143 HIS HIS B . n B 1 144 ASN 144 144 144 ASN ASN B . n B 1 145 LYS 145 145 145 LYS LYS B . n B 1 146 ASP 146 146 146 ASP ASP B . n B 1 147 VAL 147 147 147 VAL VAL B . n B 1 148 ILE 148 148 148 ILE ILE B . n B 1 149 GLU 149 149 149 GLU GLU B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 ALA 151 151 151 ALA ALA B . n B 1 152 SER 152 152 152 SER SER B . n B 1 153 ILE 153 153 153 ILE ILE B . n B 1 154 VAL 154 154 154 VAL VAL B . n B 1 155 PRO 155 155 155 PRO PRO B . n B 1 156 ASN 156 156 156 ASN ASN B . n B 1 157 GLY 157 157 157 GLY GLY B . n B 1 158 THR 158 158 158 THR THR B . n B 1 159 ARG 159 159 159 ARG ARG B . n B 1 160 VAL 160 160 160 VAL VAL B . n B 1 161 THR 161 161 161 THR THR B . n B 1 162 ILE 162 162 162 ILE ILE B . n B 1 163 ASN 163 163 163 ASN ASN B . n B 1 164 ARG 164 164 164 ARG ARG B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD 1 201 1 CD CD A . D 3 SO4 1 203 3 SO4 SO4 A . E 2 CD 1 202 2 CD CD B . F 3 SO4 1 204 4 SO4 SO4 B . G 3 SO4 1 205 5 SO4 SO4 B . H 3 SO4 1 206 6 SO4 SO4 B . I 4 HOH 1 204 2 HOH HOH A . I 4 HOH 2 205 4 HOH HOH A . I 4 HOH 3 206 5 HOH HOH A . I 4 HOH 4 207 6 HOH HOH A . I 4 HOH 5 208 7 HOH HOH A . I 4 HOH 6 209 9 HOH HOH A . I 4 HOH 7 210 11 HOH HOH A . I 4 HOH 8 211 17 HOH HOH A . I 4 HOH 9 212 21 HOH HOH A . I 4 HOH 10 213 23 HOH HOH A . I 4 HOH 11 214 27 HOH HOH A . I 4 HOH 12 215 29 HOH HOH A . I 4 HOH 13 216 30 HOH HOH A . I 4 HOH 14 217 32 HOH HOH A . I 4 HOH 15 218 33 HOH HOH A . I 4 HOH 16 219 37 HOH HOH A . I 4 HOH 17 220 38 HOH HOH A . I 4 HOH 18 221 40 HOH HOH A . I 4 HOH 19 222 43 HOH HOH A . I 4 HOH 20 223 45 HOH HOH A . I 4 HOH 21 224 51 HOH HOH A . I 4 HOH 22 225 52 HOH HOH A . I 4 HOH 23 226 55 HOH HOH A . I 4 HOH 24 227 57 HOH HOH A . I 4 HOH 25 228 58 HOH HOH A . I 4 HOH 26 229 60 HOH HOH A . I 4 HOH 27 230 62 HOH HOH A . I 4 HOH 28 231 63 HOH HOH A . I 4 HOH 29 232 64 HOH HOH A . I 4 HOH 30 233 65 HOH HOH A . I 4 HOH 31 234 68 HOH HOH A . I 4 HOH 32 235 70 HOH HOH A . I 4 HOH 33 236 74 HOH HOH A . I 4 HOH 34 237 75 HOH HOH A . I 4 HOH 35 238 76 HOH HOH A . I 4 HOH 36 239 78 HOH HOH A . I 4 HOH 37 240 79 HOH HOH A . I 4 HOH 38 241 86 HOH HOH A . I 4 HOH 39 242 90 HOH HOH A . I 4 HOH 40 243 98 HOH HOH A . I 4 HOH 41 244 99 HOH HOH A . I 4 HOH 42 245 102 HOH HOH A . I 4 HOH 43 246 103 HOH HOH A . I 4 HOH 44 247 105 HOH HOH A . I 4 HOH 45 248 107 HOH HOH A . I 4 HOH 46 249 109 HOH HOH A . I 4 HOH 47 250 111 HOH HOH A . I 4 HOH 48 251 114 HOH HOH A . I 4 HOH 49 252 115 HOH HOH A . I 4 HOH 50 253 117 HOH HOH A . I 4 HOH 51 254 118 HOH HOH A . I 4 HOH 52 255 122 HOH HOH A . I 4 HOH 53 256 125 HOH HOH A . I 4 HOH 54 257 128 HOH HOH A . I 4 HOH 55 258 131 HOH HOH A . I 4 HOH 56 259 134 HOH HOH A . I 4 HOH 57 260 137 HOH HOH A . I 4 HOH 58 261 140 HOH HOH A . I 4 HOH 59 262 141 HOH HOH A . I 4 HOH 60 263 143 HOH HOH A . I 4 HOH 61 264 144 HOH HOH A . I 4 HOH 62 265 146 HOH HOH A . I 4 HOH 63 266 148 HOH HOH A . I 4 HOH 64 267 159 HOH HOH A . I 4 HOH 65 268 160 HOH HOH A . I 4 HOH 66 269 163 HOH HOH A . I 4 HOH 67 270 165 HOH HOH A . I 4 HOH 68 271 169 HOH HOH A . J 4 HOH 1 207 1 HOH HOH B . J 4 HOH 2 208 3 HOH HOH B . J 4 HOH 3 209 8 HOH HOH B . J 4 HOH 4 210 10 HOH HOH B . J 4 HOH 5 211 12 HOH HOH B . J 4 HOH 6 212 13 HOH HOH B . J 4 HOH 7 213 14 HOH HOH B . J 4 HOH 8 214 15 HOH HOH B . J 4 HOH 9 215 16 HOH HOH B . J 4 HOH 10 216 18 HOH HOH B . J 4 HOH 11 217 19 HOH HOH B . J 4 HOH 12 218 20 HOH HOH B . J 4 HOH 13 219 22 HOH HOH B . J 4 HOH 14 220 24 HOH HOH B . J 4 HOH 15 221 25 HOH HOH B . J 4 HOH 16 222 26 HOH HOH B . J 4 HOH 17 223 28 HOH HOH B . J 4 HOH 18 224 31 HOH HOH B . J 4 HOH 19 225 34 HOH HOH B . J 4 HOH 20 226 35 HOH HOH B . J 4 HOH 21 227 36 HOH HOH B . J 4 HOH 22 228 39 HOH HOH B . J 4 HOH 23 229 41 HOH HOH B . J 4 HOH 24 230 42 HOH HOH B . J 4 HOH 25 231 44 HOH HOH B . J 4 HOH 26 232 46 HOH HOH B . J 4 HOH 27 233 47 HOH HOH B . J 4 HOH 28 234 48 HOH HOH B . J 4 HOH 29 235 49 HOH HOH B . J 4 HOH 30 236 50 HOH HOH B . J 4 HOH 31 237 53 HOH HOH B . J 4 HOH 32 238 54 HOH HOH B . J 4 HOH 33 239 56 HOH HOH B . J 4 HOH 34 240 59 HOH HOH B . J 4 HOH 35 241 61 HOH HOH B . J 4 HOH 36 242 66 HOH HOH B . J 4 HOH 37 243 67 HOH HOH B . J 4 HOH 38 244 69 HOH HOH B . J 4 HOH 39 245 71 HOH HOH B . J 4 HOH 40 246 72 HOH HOH B . J 4 HOH 41 247 73 HOH HOH B . J 4 HOH 42 248 77 HOH HOH B . J 4 HOH 43 249 81 HOH HOH B . J 4 HOH 44 250 82 HOH HOH B . J 4 HOH 45 251 83 HOH HOH B . J 4 HOH 46 252 84 HOH HOH B . J 4 HOH 47 253 85 HOH HOH B . J 4 HOH 48 254 87 HOH HOH B . J 4 HOH 49 255 88 HOH HOH B . J 4 HOH 50 256 89 HOH HOH B . J 4 HOH 51 257 91 HOH HOH B . J 4 HOH 52 258 92 HOH HOH B . J 4 HOH 53 259 93 HOH HOH B . J 4 HOH 54 260 94 HOH HOH B . J 4 HOH 55 261 95 HOH HOH B . J 4 HOH 56 262 96 HOH HOH B . J 4 HOH 57 263 97 HOH HOH B . J 4 HOH 58 264 100 HOH HOH B . J 4 HOH 59 265 101 HOH HOH B . J 4 HOH 60 266 104 HOH HOH B . J 4 HOH 61 267 106 HOH HOH B . J 4 HOH 62 268 108 HOH HOH B . J 4 HOH 63 269 110 HOH HOH B . J 4 HOH 64 270 112 HOH HOH B . J 4 HOH 65 271 113 HOH HOH B . J 4 HOH 66 272 116 HOH HOH B . J 4 HOH 67 273 119 HOH HOH B . J 4 HOH 68 274 120 HOH HOH B . J 4 HOH 69 275 121 HOH HOH B . J 4 HOH 70 276 123 HOH HOH B . J 4 HOH 71 277 124 HOH HOH B . J 4 HOH 72 278 126 HOH HOH B . J 4 HOH 73 279 129 HOH HOH B . J 4 HOH 74 280 130 HOH HOH B . J 4 HOH 75 281 133 HOH HOH B . J 4 HOH 76 282 136 HOH HOH B . J 4 HOH 77 283 138 HOH HOH B . J 4 HOH 78 284 139 HOH HOH B . J 4 HOH 79 285 142 HOH HOH B . J 4 HOH 80 286 145 HOH HOH B . J 4 HOH 81 287 147 HOH HOH B . J 4 HOH 82 288 150 HOH HOH B . J 4 HOH 83 289 151 HOH HOH B . J 4 HOH 84 290 153 HOH HOH B . J 4 HOH 85 291 157 HOH HOH B . J 4 HOH 86 292 161 HOH HOH B . J 4 HOH 87 293 166 HOH HOH B . J 4 HOH 88 294 167 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 76 ? MET SELENOMETHIONINE 3 A MSE 142 A MSE 142 ? MET SELENOMETHIONINE 4 B MSE 1 B MSE 1 ? MET SELENOMETHIONINE 5 B MSE 76 B MSE 76 ? MET SELENOMETHIONINE 6 B MSE 142 B MSE 142 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2740 ? 1 MORE -79 ? 1 'SSA (A^2)' 15240 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 119 ? A HIS 119 ? 4_455 CD ? E CD . ? B CD 202 ? 1_555 SG ? B CYS 139 ? B CYS 139 ? 1_555 122.1 ? 2 NE2 ? A HIS 119 ? A HIS 119 ? 4_455 CD ? E CD . ? B CD 202 ? 1_555 S ? F SO4 . ? B SO4 204 ? 1_555 104.0 ? 3 SG ? B CYS 139 ? B CYS 139 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 S ? F SO4 . ? B SO4 204 ? 1_555 105.0 ? 4 NE2 ? A HIS 119 ? A HIS 119 ? 4_455 CD ? E CD . ? B CD 202 ? 1_555 O3 ? F SO4 . ? B SO4 204 ? 1_555 108.8 ? 5 SG ? B CYS 139 ? B CYS 139 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O3 ? F SO4 . ? B SO4 204 ? 1_555 119.8 ? 6 S ? F SO4 . ? B SO4 204 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O3 ? F SO4 . ? B SO4 204 ? 1_555 27.6 ? 7 NE2 ? A HIS 119 ? A HIS 119 ? 4_455 CD ? E CD . ? B CD 202 ? 1_555 O1 ? F SO4 . ? B SO4 204 ? 1_555 87.0 ? 8 SG ? B CYS 139 ? B CYS 139 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O1 ? F SO4 . ? B SO4 204 ? 1_555 96.4 ? 9 S ? F SO4 . ? B SO4 204 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O1 ? F SO4 . ? B SO4 204 ? 1_555 28.0 ? 10 O3 ? F SO4 . ? B SO4 204 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O1 ? F SO4 . ? B SO4 204 ? 1_555 54.5 ? 11 NE2 ? A HIS 119 ? A HIS 119 ? 4_455 CD ? E CD . ? B CD 202 ? 1_555 O ? J HOH . ? B HOH 207 ? 1_555 97.8 ? 12 SG ? B CYS 139 ? B CYS 139 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O ? J HOH . ? B HOH 207 ? 1_555 115.0 ? 13 S ? F SO4 . ? B SO4 204 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O ? J HOH . ? B HOH 207 ? 1_555 112.7 ? 14 O3 ? F SO4 . ? B SO4 204 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O ? J HOH . ? B HOH 207 ? 1_555 85.0 ? 15 O1 ? F SO4 . ? B SO4 204 ? 1_555 CD ? E CD . ? B CD 202 ? 1_555 O ? J HOH . ? B HOH 207 ? 1_555 138.1 ? 16 SG ? A CYS 139 ? A CYS 139 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 O4 ? D SO4 . ? A SO4 203 ? 1_555 115.9 ? 17 SG ? A CYS 139 ? A CYS 139 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 O2 ? D SO4 . ? A SO4 203 ? 1_555 101.6 ? 18 O4 ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 O2 ? D SO4 . ? A SO4 203 ? 1_555 54.0 ? 19 SG ? A CYS 139 ? A CYS 139 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 S ? D SO4 . ? A SO4 203 ? 1_555 105.0 ? 20 O4 ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 S ? D SO4 . ? A SO4 203 ? 1_555 27.6 ? 21 O2 ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 S ? D SO4 . ? A SO4 203 ? 1_555 27.7 ? 22 SG ? A CYS 139 ? A CYS 139 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 O ? I HOH . ? A HOH 204 ? 1_555 111.0 ? 23 O4 ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 O ? I HOH . ? A HOH 204 ? 1_555 84.8 ? 24 O2 ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 O ? I HOH . ? A HOH 204 ? 1_555 136.0 ? 25 S ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 O ? I HOH . ? A HOH 204 ? 1_555 112.4 ? 26 SG ? A CYS 139 ? A CYS 139 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 NE2 ? B HIS 119 ? B HIS 119 ? 4_555 121.9 ? 27 O4 ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 NE2 ? B HIS 119 ? B HIS 119 ? 4_555 115.8 ? 28 O2 ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 NE2 ? B HIS 119 ? B HIS 119 ? 4_555 88.2 ? 29 S ? D SO4 . ? A SO4 203 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 NE2 ? B HIS 119 ? B HIS 119 ? 4_555 108.4 ? 30 O ? I HOH . ? A HOH 204 ? 1_555 CD ? C CD . ? A CD 201 ? 1_555 NE2 ? B HIS 119 ? B HIS 119 ? 4_555 98.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-01 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 22 4 'Structure model' '_pdbx_struct_conn_angle.value' 23 4 'Structure model' '_struct_conn.conn_type_id' 24 4 'Structure model' '_struct_conn.id' 25 4 'Structure model' '_struct_conn.pdbx_dist_value' 26 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 27 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 4 'Structure model' '_struct_conn.ptnr1_symmetry' 35 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 37 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 42 4 'Structure model' '_struct_conn.ptnr2_symmetry' 43 4 'Structure model' '_struct_ref_seq_dif.details' 44 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 45 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 46 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SHARP phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG B SER 22 ? ? O B ALA 25 ? ? 1.22 2 1 O A LEU 26 ? ? N A ASN 30 ? ? 1.85 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASN _pdbx_validate_rmsd_angle.auth_seq_id_1 30 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 31 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 31 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 89.55 _pdbx_validate_rmsd_angle.angle_target_value 128.40 _pdbx_validate_rmsd_angle.angle_deviation -38.85 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 25 ? ? -64.71 92.17 2 1 LEU A 26 ? ? 86.24 -40.78 3 1 GLN A 34 ? ? -53.85 89.88 4 1 ALA A 35 ? ? -152.24 46.55 5 1 SER A 116 ? ? -73.77 34.98 6 1 HIS A 119 ? ? 74.15 -1.21 7 1 GLN B 34 ? ? -79.94 41.38 8 1 ALA B 35 ? ? -91.02 55.04 9 1 SER B 116 ? ? -79.49 34.22 10 1 HIS B 119 ? ? 80.21 -3.62 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LEU _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 26 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 LEU _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 27 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -148.24 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CA ? A ASN 30 ? 'WRONG HAND' . 2 1 CA ? A LEU 37 ? 'WRONG HAND' . 3 1 CA ? B ASN 30 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLN 28 ? CD ? A GLN 28 CD 2 1 Y 0 A GLN 28 ? OE1 ? A GLN 28 OE1 3 1 Y 0 A GLN 28 ? NE2 ? A GLN 28 NE2 4 1 Y 0 A ASN 30 ? CB ? A ASN 30 CB 5 1 Y 0 A ASN 30 ? CG ? A ASN 30 CG 6 1 Y 0 A ASN 30 ? OD1 ? A ASN 30 OD1 7 1 Y 0 A ASN 30 ? ND2 ? A ASN 30 ND2 8 1 Y 0 A PRO 31 ? CB ? A PRO 31 CB 9 1 Y 0 A PRO 31 ? CG ? A PRO 31 CG 10 1 Y 0 A PRO 31 ? CD ? A PRO 31 CD 11 1 Y 0 A LEU 37 ? CB ? A LEU 37 CB 12 1 Y 0 A LEU 37 ? CG ? A LEU 37 CG 13 1 Y 0 A LEU 37 ? CD1 ? A LEU 37 CD1 14 1 Y 0 A LEU 37 ? CD2 ? A LEU 37 CD2 15 1 Y 0 A GLN 41 ? CG ? A GLN 41 CG 16 1 Y 0 A GLN 41 ? CD ? A GLN 41 CD 17 1 Y 0 A GLN 41 ? OE1 ? A GLN 41 OE1 18 1 Y 0 A GLN 41 ? NE2 ? A GLN 41 NE2 19 1 Y 0 A SER 42 ? CB ? A SER 42 CB 20 1 Y 0 A SER 42 ? OG ? A SER 42 OG 21 1 Y 0 A LYS 85 ? CE ? A LYS 85 CE 22 1 Y 0 A LYS 85 ? NZ ? A LYS 85 NZ 23 1 Y 0 A ILE 86 ? CD1 ? A ILE 86 CD1 24 1 Y 0 A GLN 101 ? CD ? A GLN 101 CD 25 1 Y 0 A GLN 101 ? OE1 ? A GLN 101 OE1 26 1 Y 0 A GLN 101 ? NE2 ? A GLN 101 NE2 27 1 Y 0 A ARG 102 ? CG ? A ARG 102 CG 28 1 Y 0 A ARG 102 ? CD ? A ARG 102 CD 29 1 Y 0 A ARG 102 ? NE ? A ARG 102 NE 30 1 Y 0 A ARG 102 ? CZ ? A ARG 102 CZ 31 1 Y 0 A ARG 102 ? NH1 ? A ARG 102 NH1 32 1 Y 0 A ARG 102 ? NH2 ? A ARG 102 NH2 33 1 Y 0 B LYS 7 ? CD ? B LYS 7 CD 34 1 Y 0 B LYS 7 ? CE ? B LYS 7 CE 35 1 Y 0 B LYS 7 ? NZ ? B LYS 7 NZ 36 1 Y 0 B LEU 26 ? CB ? B LEU 26 CB 37 1 Y 0 B LEU 26 ? CG ? B LEU 26 CG 38 1 Y 0 B LEU 26 ? CD1 ? B LEU 26 CD1 39 1 Y 0 B LEU 26 ? CD2 ? B LEU 26 CD2 40 1 Y 0 B ASN 30 ? CB ? B ASN 30 CB 41 1 Y 0 B ASN 30 ? CG ? B ASN 30 CG 42 1 Y 0 B ASN 30 ? OD1 ? B ASN 30 OD1 43 1 Y 0 B ASN 30 ? ND2 ? B ASN 30 ND2 44 1 Y 0 B ARG 74 ? CG ? B ARG 74 CG 45 1 Y 0 B ARG 74 ? CD ? B ARG 74 CD 46 1 Y 0 B ARG 74 ? NE ? B ARG 74 NE 47 1 Y 0 B ARG 74 ? CZ ? B ARG 74 CZ 48 1 Y 0 B ARG 74 ? NH1 ? B ARG 74 NH1 49 1 Y 0 B ARG 74 ? NH2 ? B ARG 74 NH2 50 1 Y 0 B GLN 101 ? CG ? B GLN 101 CG 51 1 Y 0 B GLN 101 ? CD ? B GLN 101 CD 52 1 Y 0 B GLN 101 ? OE1 ? B GLN 101 OE1 53 1 Y 0 B GLN 101 ? NE2 ? B GLN 101 NE2 54 1 Y 0 B LYS 145 ? CE ? B LYS 145 CE 55 1 Y 0 B LYS 145 ? NZ ? B LYS 145 NZ 56 1 Y 0 B ARG 164 ? CG ? B ARG 164 CG 57 1 Y 0 B ARG 164 ? CD ? B ARG 164 CD 58 1 Y 0 B ARG 164 ? NE ? B ARG 164 NE 59 1 Y 0 B ARG 164 ? CZ ? B ARG 164 CZ 60 1 Y 0 B ARG 164 ? NH1 ? B ARG 164 NH1 61 1 Y 0 B ARG 164 ? NH2 ? B ARG 164 NH2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 0 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id LEU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 26 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id LEU _pdbx_unobs_or_zero_occ_residues.label_seq_id 26 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 'SULFATE ION' SO4 4 water HOH #