HEADER CONTRACTILE PROTEIN 09-OCT-98 1YAG TITLE STRUCTURE OF THE YEAST ACTIN-HUMAN GELSOLIN SEGMENT 1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (ACTIN); COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: PROTEIN (GELSOLIN); COMPND 6 CHAIN: G; COMPND 7 FRAGMENT: SUBDOMAIN 1; COMPND 8 SYNONYM: ACTIN-DEPOLYMERIZING FACTOR (ADF); COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 STRAIN: RED STAR; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS COMPLEX, ACTIN, GELSOLIN, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.VOROBIEV,B.STROKOPYTOV,C.FRIEDEN,S.C.ALMO REVDAT 7 03-APR-24 1YAG 1 REMARK REVDAT 6 27-DEC-23 1YAG 1 REMARK LINK REVDAT 5 13-JUL-11 1YAG 1 VERSN REVDAT 4 24-FEB-09 1YAG 1 VERSN REVDAT 3 20-MAY-03 1YAG 1 SOURCE AUTHOR JRNL REMARK REVDAT 3 2 1 MASTER REVDAT 2 12-JAN-00 1YAG 1 JRNL REVDAT 1 09-OCT-99 1YAG 0 JRNL AUTH S.VOROBIEV,B.STROKOPYTOV,D.G.DRUBIN,C.FRIEDEN,S.ONO, JRNL AUTH 2 J.CONDEELIS,P.A.RUBENSTEIN,S.C.ALMO JRNL TITL THE STRUCTURE OF NONVERTEBRATE ACTIN: IMPLICATIONS FOR THE JRNL TITL 2 ATP HYDROLYTIC MECHANISM JRNL REF PROC.NATL.ACAD.SCI.USA V. 100 5760 2003 JRNL REFN ISSN 0027-8424 JRNL PMID 12732734 JRNL DOI 10.1073/PNAS.0832273100 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.K.CHIK,U.LINDBERG,C.E.SCHUTT REMARK 1 TITL THE STRUCTURE OF AN OPEN STATE OF BETA-ACTIN AT 2.65 A REMARK 1 TITL 2 RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 263 607 1996 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.J.MCLAUGHLIN,J.T.GOOCH,H.G.MANNHERZ,A.G.WEEDS REMARK 1 TITL STRUCTURE OF GELSOLIN SEGMENT 1-ACTIN COMPLEX AND THE REMARK 1 TITL 2 MECHANISM OF FILAMENT SEVERING REMARK 1 REF NATURE V. 364 685 1993 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 3 REMARK 1 AUTH W.KABSCH,H.G.MANNHERZ,D.SUCK,E.F.PAI,K.C.HOLMES REMARK 1 TITL ATOMIC STRUCTURE OF THE ACTIN:DNASE I COMPLEX REMARK 1 REF NATURE V. 347 37 1990 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 49883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3883 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 427 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 1.480 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.26 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : PARAM11.WAT REMARK 3 PARAMETER FILE 3 : PARAMETER.ELEMENTS REMARK 3 PARAMETER FILE 4 : PARAM.ATP REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : TOPOLOGY.ELEMENTS REMARK 3 TOPOLOGY FILE 4 : TOPOLOGY.ATP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YAG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-99. REMARK 100 THE DEPOSITION ID IS D_1000007025. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-98 REMARK 200 TEMPERATURE (KELVIN) : 93.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49913 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: RABBIT SKELETAL MUSCLE ACTIN-HUMAN GELSOLIN REMARK 200 SEGMENT 1 COMPLEX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 88.33100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.04950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 88.33100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.04950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 377 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 40 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 41 CG CD OE1 NE2 REMARK 470 ILE A 43 CG1 CG2 CD1 REMARK 470 VAL A 45 CG1 CG2 REMARK 470 LYS G 111 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 599 O HOH A 599 2555 1.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 61 34.89 -98.19 REMARK 500 SER A 201 -21.71 -145.37 REMARK 500 ASN A 296 59.50 -143.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 AN ORDERED MAGNESIUM ION IS OBSERVED BOUND TO ATP. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 376 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 378 O1B REMARK 620 2 ATP A 378 O2G 89.8 REMARK 620 3 HOH A 386 O 101.1 83.5 REMARK 620 4 HOH A 387 O 171.9 83.9 83.3 REMARK 620 5 HOH A 394 O 90.1 174.4 91.1 96.7 REMARK 620 6 HOH A 396 O 91.3 103.3 165.9 85.2 82.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 126 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY G 41 O REMARK 620 2 ASP G 42 OD1 80.4 REMARK 620 3 GLU G 73 OE1 73.3 104.9 REMARK 620 4 GLU G 73 OE2 121.4 92.5 52.4 REMARK 620 5 VAL G 121 O 153.1 88.3 133.5 83.2 REMARK 620 6 HOH G 151 O 73.9 97.1 136.4 163.3 83.5 REMARK 620 7 HOH G 158 O 99.4 176.3 71.6 84.5 93.4 86.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA G 126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 378 DBREF 1YAG A 1 375 UNP P60010 ACT_YEAST 1 375 DBREF 1YAG G 1 125 UNP P06396 GELS_HUMAN 52 176 SEQRES 1 A 375 MET ASP SER GLU VAL ALA ALA LEU VAL ILE ASP ASN GLY SEQRES 2 A 375 SER GLY MET CYS LYS ALA GLY PHE ALA GLY ASP ASP ALA SEQRES 3 A 375 PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG PRO ARG SEQRES 4 A 375 HIS GLN GLY ILE MET VAL GLY MET GLY GLN LYS ASP SER SEQRES 5 A 375 TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY ILE LEU SEQRES 6 A 375 THR LEU ARG TYR PRO ILE GLU HIS GLY ILE VAL THR ASN SEQRES 7 A 375 TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR PHE TYR SEQRES 8 A 375 ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO VAL LEU SEQRES 9 A 375 LEU THR GLU ALA PRO MET ASN PRO LYS SER ASN ARG GLU SEQRES 10 A 375 LYS MET THR GLN ILE MET PHE GLU THR PHE ASN VAL PRO SEQRES 11 A 375 ALA PHE TYR VAL SER ILE GLN ALA VAL LEU SER LEU TYR SEQRES 12 A 375 SER SER GLY ARG THR THR GLY ILE VAL LEU ASP SER GLY SEQRES 13 A 375 ASP GLY VAL THR HIS VAL VAL PRO ILE TYR ALA GLY PHE SEQRES 14 A 375 SER LEU PRO HIS ALA ILE LEU ARG ILE ASP LEU ALA GLY SEQRES 15 A 375 ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU SER GLU SEQRES 16 A 375 ARG GLY TYR SER PHE SER THR THR ALA GLU ARG GLU ILE SEQRES 17 A 375 VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL ALA LEU SEQRES 18 A 375 ASP PHE GLU GLN GLU MET GLN THR ALA ALA GLN SER SER SEQRES 19 A 375 SER ILE GLU LYS SER TYR GLU LEU PRO ASP GLY GLN VAL SEQRES 20 A 375 ILE THR ILE GLY ASN GLU ARG PHE ARG ALA PRO GLU ALA SEQRES 21 A 375 LEU PHE HIS PRO SER VAL LEU GLY LEU GLU SER ALA GLY SEQRES 22 A 375 ILE ASP GLN THR THR TYR ASN SER ILE MET LYS CYS ASP SEQRES 23 A 375 VAL ASP VAL ARG LYS GLU LEU TYR GLY ASN ILE VAL MET SEQRES 24 A 375 SER GLY GLY THR THR MET PHE PRO GLY ILE ALA GLU ARG SEQRES 25 A 375 MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER SER MET SEQRES 26 A 375 LYS VAL LYS ILE ILE ALA PRO PRO GLU ARG LYS TYR SER SEQRES 27 A 375 VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU THR THR SEQRES 28 A 375 PHE GLN GLN MET TRP ILE SER LYS GLN GLU TYR ASP GLU SEQRES 29 A 375 SER GLY PRO SER ILE VAL HIS HIS LYS CYS PHE SEQRES 1 G 125 MET VAL VAL GLU HIS PRO GLU PHE LEU LYS ALA GLY LYS SEQRES 2 G 125 GLU PRO GLY LEU GLN ILE TRP ARG VAL GLU LYS PHE ASP SEQRES 3 G 125 LEU VAL PRO VAL PRO THR ASN LEU TYR GLY ASP PHE PHE SEQRES 4 G 125 THR GLY ASP ALA TYR VAL ILE LEU LYS THR VAL GLN LEU SEQRES 5 G 125 ARG ASN GLY ASN LEU GLN TYR ASP LEU HIS TYR TRP LEU SEQRES 6 G 125 GLY ASN GLU CYS SER GLN ASP GLU SER GLY ALA ALA ALA SEQRES 7 G 125 ILE PHE THR VAL GLN LEU ASP ASP TYR LEU ASN GLY ARG SEQRES 8 G 125 ALA VAL GLN HIS ARG GLU VAL GLN GLY PHE GLU SER ALA SEQRES 9 G 125 THR PHE LEU GLY TYR PHE LYS SER GLY LEU LYS TYR LYS SEQRES 10 G 125 LYS GLY GLY VAL ALA SER GLY PHE HET MG A 376 1 HET SO4 A 377 5 HET ATP A 378 31 HET CA G 126 1 HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION FORMUL 3 MG MG 2+ FORMUL 4 SO4 O4 S 2- FORMUL 5 ATP C10 H16 N5 O13 P3 FORMUL 6 CA CA 2+ FORMUL 7 HOH *427(H2 O) HELIX 1 1 ASP A 56 SER A 60 1 5 HELIX 2 2 ARG A 62 ILE A 64 5 3 HELIX 3 3 TRP A 79 TYR A 91 1 13 HELIX 4 4 PRO A 98 GLU A 100 5 3 HELIX 5 5 LYS A 113 GLU A 125 1 13 HELIX 6 6 GLN A 137 SER A 144 1 8 HELIX 7 7 PRO A 172 ALA A 174 5 3 HELIX 8 8 GLY A 182 ARG A 196 1 15 HELIX 9 9 THR A 203 LEU A 216 1 14 HELIX 10 10 PHE A 223 ALA A 231 1 9 HELIX 11 11 ASN A 252 ARG A 256 5 5 HELIX 12 12 PRO A 258 PHE A 262 5 5 HELIX 13 13 PRO A 264 LEU A 267 5 4 HELIX 14 14 ILE A 274 LYS A 284 1 11 HELIX 15 15 VAL A 287 TYR A 294 1 8 HELIX 16 16 GLY A 302 THR A 304 5 3 HELIX 17 17 ILE A 309 LEU A 320 1 12 HELIX 18 18 SER A 338 SER A 348 1 11 HELIX 19 19 THR A 350 GLN A 354 5 5 HELIX 20 20 LYS A 359 SER A 365 1 7 HELIX 21 21 PRO A 367 LYS A 373 5 7 HELIX 22 22 PRO G 6 LYS G 10 1 5 HELIX 23 23 THR G 32 LEU G 34 5 3 HELIX 24 24 GLN G 71 TYR G 87 1 17 HELIX 25 25 ALA G 104 TYR G 109 1 6 SHEET 1 A 5 PHE A 132 ILE A 136 0 SHEET 2 A 5 VAL A 103 GLU A 107 1 N VAL A 103 O TYR A 133 SHEET 3 A 5 LEU A 8 ASN A 12 1 N LEU A 8 O LEU A 104 SHEET 4 A 5 MET A 16 PHE A 21 -1 N GLY A 20 O VAL A 9 SHEET 5 A 5 ALA A 29 PRO A 32 -1 N PHE A 31 O CYS A 17 SHEET 1 B 2 VAL A 35 PRO A 38 0 SHEET 2 B 2 LEU A 65 ARG A 68 -1 N ARG A 68 O VAL A 35 SHEET 1 C 4 ILE A 297 SER A 300 0 SHEET 2 C 4 GLY A 150 SER A 155 1 N ILE A 151 O VAL A 298 SHEET 3 C 4 THR A 160 ILE A 165 -1 N ILE A 165 O GLY A 150 SHEET 4 C 4 LEU A 176 ILE A 178 -1 N ILE A 178 O THR A 160 SHEET 1 D 2 LYS A 238 GLU A 241 0 SHEET 2 D 2 VAL A 247 ILE A 250 -1 N ILE A 250 O LYS A 238 SHEET 1 E 5 ASP G 26 PRO G 29 0 SHEET 2 E 5 GLY G 16 GLU G 23 -1 N GLU G 23 O ASP G 26 SHEET 3 E 5 ALA G 43 GLN G 51 -1 N THR G 49 O GLY G 16 SHEET 4 E 5 LEU G 57 LEU G 65 -1 N TRP G 64 O TYR G 44 SHEET 5 E 5 ALA G 92 VAL G 98 1 N VAL G 93 O TYR G 59 SHEET 1 F 2 ASP G 37 PHE G 39 0 SHEET 2 F 2 LYS G 115 LYS G 117 1 N LYS G 115 O PHE G 38 LINK MG MG A 376 O1B ATP A 378 1555 1555 2.29 LINK MG MG A 376 O2G ATP A 378 1555 1555 2.24 LINK MG MG A 376 O HOH A 386 1555 1555 2.27 LINK MG MG A 376 O HOH A 387 1555 1555 2.24 LINK MG MG A 376 O HOH A 394 1555 1555 2.08 LINK MG MG A 376 O HOH A 396 1555 1555 2.09 LINK O GLY G 41 CA CA G 126 1555 1555 2.31 LINK OD1 ASP G 42 CA CA G 126 1555 1555 2.39 LINK OE1 GLU G 73 CA CA G 126 1555 1555 2.52 LINK OE2 GLU G 73 CA CA G 126 1555 1555 2.42 LINK O VAL G 121 CA CA G 126 1555 1555 2.36 LINK CA CA G 126 O HOH G 151 1555 1555 2.55 LINK CA CA G 126 O HOH G 158 1555 1555 2.47 SITE 1 AC1 5 ATP A 378 HOH A 386 HOH A 387 HOH A 394 SITE 2 AC1 5 HOH A 396 SITE 1 AC2 6 GLY G 41 ASP G 42 GLU G 73 VAL G 121 SITE 2 AC2 6 HOH G 151 HOH G 158 SITE 1 AC3 4 ARG A 62 THR A 202 THR A 203 ALA A 204 SITE 1 AC4 29 GLY A 13 SER A 14 GLY A 15 MET A 16 SITE 2 AC4 29 LYS A 18 GLY A 156 ASP A 157 GLY A 158 SITE 3 AC4 29 VAL A 159 GLY A 182 ARG A 210 LYS A 213 SITE 4 AC4 29 GLU A 214 GLY A 301 GLY A 302 THR A 303 SITE 5 AC4 29 MET A 305 PHE A 306 LYS A 336 MG A 376 SITE 6 AC4 29 HOH A 386 HOH A 387 HOH A 394 HOH A 397 SITE 7 AC4 29 HOH A 413 HOH A 416 HOH A 474 HOH A 504 SITE 8 AC4 29 HOH A 587 CRYST1 176.662 68.099 54.598 90.00 102.55 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005661 0.000000 0.001260 0.00000 SCALE2 0.000000 0.014685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018764 0.00000