HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-DEC-04 1YBX TITLE CONSERVED HYPOTHETICAL PROTEIN CTH-383 FROM CLOSTRIDIUM THERMOCELLUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 1515; SOURCE 4 ATCC: 27405; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CONSERVED HYPOTHETICAL PROTEIN, CLOSTRIDIUM THERMOCELLUM, STRUCTURAL KEYWDS 2 GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, SOUTHEAST COLLABORATORY KEYWDS 3 FOR STRUCTURAL GENOMICS, SECSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR W.TEMPEL,J.CHANG,M.ZHAO,J.HABEL,I.KATAEVA,H.XU,L.CHEN,D.LEE,J.NGUYEN, AUTHOR 2 S.-H.CHANG,P.HORANYI,Q.FLORENCE,W.ZHOU,D.LIN,H.ZHANG,L.LJUNDAHL,Z.- AUTHOR 3 J.LIU,J.ROSE,B.-C.WANG,SOUTHEAST COLLABORATORY FOR STRUCTURAL AUTHOR 4 GENOMICS (SECSG) REVDAT 6 16-OCT-24 1YBX 1 REMARK SEQADV LINK REVDAT 5 11-OCT-17 1YBX 1 REMARK REVDAT 4 13-JUL-11 1YBX 1 VERSN REVDAT 3 24-FEB-09 1YBX 1 VERSN REVDAT 2 24-OCT-06 1YBX 1 KEYWDS JRNL REMARK MASTER REVDAT 1 01-FEB-05 1YBX 0 JRNL AUTH W.TEMPEL,J.CHANG,M.ZHAO,J.HABEL,I.KATAEVA,H.XU,L.CHEN,D.LEE, JRNL AUTH 2 J.NGUYEN,S.-H.CHANG,P.HORANYI,Q.FLORENCE,W.ZHOU,D.LIN, JRNL AUTH 3 H.ZHANG,L.LJUNDAHL,Z.-J.LIU,J.ROSE,B.-C.WANG JRNL TITL CONSERVED HYPOTHETICAL PROTEIN CTH-383 FROM CLOSTRIDIUM JRNL TITL 2 THERMOCELLUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16267 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.164 REMARK 3 FREE R VALUE TEST SET COUNT : 840 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 387 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1337 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35400 REMARK 3 B22 (A**2) : 1.12500 REMARK 3 B33 (A**2) : -1.07900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.41300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.159 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.116 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.572 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1348 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1320 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1821 ; 1.455 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3058 ; 0.842 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 183 ; 4.746 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 49 ;37.552 ;27.551 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 263 ;14.506 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;20.756 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 234 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1487 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 203 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 260 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1184 ; 0.165 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 663 ; 0.152 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 828 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 51 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.139 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 22 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 964 ; 1.299 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 376 ; 0.295 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1476 ; 1.459 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1255 ; 0.638 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 438 ; 3.164 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 956 ; 0.645 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 345 ; 5.031 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1803 ; 1.878 ; 4.500 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6570 13.5280 55.7010 REMARK 3 T TENSOR REMARK 3 T11: -0.0394 T22: 0.0208 REMARK 3 T33: -0.1602 T12: 0.0157 REMARK 3 T13: -0.0085 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 2.0108 L22: 1.3136 REMARK 3 L33: 7.1043 L12: -0.7285 REMARK 3 L13: -2.3484 L23: 2.9066 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: -0.2622 S13: 0.0942 REMARK 3 S21: -0.0194 S22: 0.0483 S23: 0.0247 REMARK 3 S31: -0.1862 S32: 0.3435 S33: -0.0708 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 103 REMARK 3 ORIGIN FOR THE GROUP (A): -8.4690 -2.6340 56.1550 REMARK 3 T TENSOR REMARK 3 T11: -0.0443 T22: -0.0001 REMARK 3 T33: -0.1435 T12: 0.0095 REMARK 3 T13: -0.0372 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.0375 L22: 1.0346 REMARK 3 L33: 5.0612 L12: -0.4085 REMARK 3 L13: 1.6952 L23: -1.8220 REMARK 3 S TENSOR REMARK 3 S11: 0.0625 S12: -0.2283 S13: -0.2389 REMARK 3 S21: 0.0928 S22: 0.0230 S23: -0.0888 REMARK 3 S31: 0.1663 S32: 0.0183 S33: -0.0855 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1YBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16740 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 73.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 12.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAS REMARK 200 SOFTWARE USED: SOLVE 2.06, RESOLVE 2.06, ISAS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 27.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG 3350, 0.2M TRILITHIUM REMARK 280 CITRATE, MODIFIED MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 18.39600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAINS. THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -29 REMARK 465 GLY A -28 REMARK 465 SER A -27 REMARK 465 SER A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 GLY A -17 REMARK 465 LEU A -16 REMARK 465 VAL A -15 REMARK 465 PRO A -14 REMARK 465 ARG A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 GLN A -10 REMARK 465 SER A -9 REMARK 465 THR A -8 REMARK 465 SER A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 LYS A -4 REMARK 465 LYS A -3 REMARK 465 ALA A -2 REMARK 465 GLY A -1 REMARK 465 LEU A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 PHE A 6 REMARK 465 PRO A 7 REMARK 465 GLY A 8 REMARK 465 PHE A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 ASN A 12 REMARK 465 GLY A 104 REMARK 465 GLY A 105 REMARK 465 LEU A 106 REMARK 465 GLY A 107 REMARK 465 GLY A 108 REMARK 465 ILE A 109 REMARK 465 PRO A 110 REMARK 465 GLY A 111 REMARK 465 LEU A 112 REMARK 465 PHE A 113 REMARK 465 MSE B -29 REMARK 465 GLY B -28 REMARK 465 SER B -27 REMARK 465 SER B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 GLY B -17 REMARK 465 LEU B -16 REMARK 465 VAL B -15 REMARK 465 PRO B -14 REMARK 465 ARG B -13 REMARK 465 GLY B -12 REMARK 465 SER B -11 REMARK 465 GLN B -10 REMARK 465 SER B -9 REMARK 465 THR B -8 REMARK 465 SER B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 LYS B -4 REMARK 465 LYS B -3 REMARK 465 ALA B -2 REMARK 465 GLY B -1 REMARK 465 LEU B 0 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLY B 4 REMARK 465 GLY B 5 REMARK 465 PHE B 6 REMARK 465 PRO B 7 REMARK 465 GLY B 8 REMARK 465 PHE B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 GLY B 104 REMARK 465 GLY B 105 REMARK 465 LEU B 106 REMARK 465 GLY B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 109 REMARK 465 PRO B 110 REMARK 465 GLY B 111 REMARK 465 LEU B 112 REMARK 465 PHE B 113 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 13 CG1 CD1 REMARK 470 ASN A 14 CG OD1 ND2 REMARK 470 LYS A 18 CE NZ REMARK 470 GLN A 31 CD OE1 NE2 REMARK 470 LYS A 35 CE NZ REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 ARG A 55 CD NE CZ NH1 NH2 REMARK 470 LYS A 59 CE NZ REMARK 470 ILE B 13 CG1 CG2 CD1 REMARK 470 ASN B 14 CG OD1 ND2 REMARK 470 LYS B 18 CD CE NZ REMARK 470 GLN B 19 CG CD OE1 NE2 REMARK 470 LYS B 22 CE NZ REMARK 470 GLN B 31 CD OE1 NE2 REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 LYS B 35 CE NZ REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 ARG B 55 CD NE CZ NH1 NH2 REMARK 470 LYS B 59 NZ REMARK 470 GLU B 60 CD OE1 OE2 REMARK 470 GLU B 93 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 72 64.03 -150.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CTH-383 RELATED DB: TARGETDB DBREF 1YBX A 1 113 GB 48857448 ZP_00311451 1 113 DBREF 1YBX B 1 113 GB 48857448 ZP_00311451 1 113 SEQADV 1YBX MSE A -29 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -28 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -27 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -26 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -25 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -24 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -23 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -22 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -21 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -20 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -19 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -18 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -17 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU A -16 GB 48857448 CLONING ARTIFACT SEQADV 1YBX VAL A -15 GB 48857448 CLONING ARTIFACT SEQADV 1YBX PRO A -14 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ARG A -13 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -12 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -11 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLN A -10 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -9 GB 48857448 CLONING ARTIFACT SEQADV 1YBX THR A -8 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -7 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU A -6 GB 48857448 CLONING ARTIFACT SEQADV 1YBX TYR A -5 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS A -4 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS A -3 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ALA A -2 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -1 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU A 0 GB 48857448 CLONING ARTIFACT SEQADV 1YBX MSE A 1 GB 48857448 MET 1 MODIFIED RESIDUE SEQADV 1YBX MSE A 23 GB 48857448 MET 23 MODIFIED RESIDUE SEQADV 1YBX MSE A 27 GB 48857448 MET 27 MODIFIED RESIDUE SEQADV 1YBX MSE A 75 GB 48857448 MET 75 MODIFIED RESIDUE SEQADV 1YBX MSE A 94 GB 48857448 MET 94 MODIFIED RESIDUE SEQADV 1YBX MSE B -29 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -28 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -27 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -26 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -25 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -24 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -23 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -22 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -21 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -20 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -19 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -18 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -17 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU B -16 GB 48857448 CLONING ARTIFACT SEQADV 1YBX VAL B -15 GB 48857448 CLONING ARTIFACT SEQADV 1YBX PRO B -14 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ARG B -13 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -12 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -11 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLN B -10 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -9 GB 48857448 CLONING ARTIFACT SEQADV 1YBX THR B -8 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -7 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU B -6 GB 48857448 CLONING ARTIFACT SEQADV 1YBX TYR B -5 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS B -4 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS B -3 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ALA B -2 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -1 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU B 0 GB 48857448 CLONING ARTIFACT SEQADV 1YBX MSE B 1 GB 48857448 MET 1 MODIFIED RESIDUE SEQADV 1YBX MSE B 23 GB 48857448 MET 23 MODIFIED RESIDUE SEQADV 1YBX MSE B 27 GB 48857448 MET 27 MODIFIED RESIDUE SEQADV 1YBX MSE B 75 GB 48857448 MET 75 MODIFIED RESIDUE SEQADV 1YBX MSE B 94 GB 48857448 MET 94 MODIFIED RESIDUE SEQRES 1 A 143 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 143 LEU VAL PRO ARG GLY SER GLN SER THR SER LEU TYR LYS SEQRES 3 A 143 LYS ALA GLY LEU MSE ALA LYS GLY GLY PHE PRO GLY PHE SEQRES 4 A 143 GLY GLY ASN ILE ASN ASN LEU VAL LYS GLN ALA GLN LYS SEQRES 5 A 143 MSE GLN ARG ASP MSE GLU ARG VAL GLN GLU GLU LEU LYS SEQRES 6 A 143 GLU LYS THR VAL GLU ALA SER ALA GLY GLY GLY ALA VAL SEQRES 7 A 143 THR VAL VAL ALA THR GLY ARG LYS ASP ILE LYS GLU ILE SEQRES 8 A 143 THR ILE LYS PRO GLU VAL VAL ASP PRO ASP ASP VAL GLU SEQRES 9 A 143 MSE LEU GLN ASP LEU ILE LEU ALA ALA VAL ASN GLU ALA SEQRES 10 A 143 LEU ARG LYS ALA ASP GLU MSE VAL THR ALA GLU ILE SER SEQRES 11 A 143 LYS ILE THR GLY GLY LEU GLY GLY ILE PRO GLY LEU PHE SEQRES 1 B 143 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 143 LEU VAL PRO ARG GLY SER GLN SER THR SER LEU TYR LYS SEQRES 3 B 143 LYS ALA GLY LEU MSE ALA LYS GLY GLY PHE PRO GLY PHE SEQRES 4 B 143 GLY GLY ASN ILE ASN ASN LEU VAL LYS GLN ALA GLN LYS SEQRES 5 B 143 MSE GLN ARG ASP MSE GLU ARG VAL GLN GLU GLU LEU LYS SEQRES 6 B 143 GLU LYS THR VAL GLU ALA SER ALA GLY GLY GLY ALA VAL SEQRES 7 B 143 THR VAL VAL ALA THR GLY ARG LYS ASP ILE LYS GLU ILE SEQRES 8 B 143 THR ILE LYS PRO GLU VAL VAL ASP PRO ASP ASP VAL GLU SEQRES 9 B 143 MSE LEU GLN ASP LEU ILE LEU ALA ALA VAL ASN GLU ALA SEQRES 10 B 143 LEU ARG LYS ALA ASP GLU MSE VAL THR ALA GLU ILE SER SEQRES 11 B 143 LYS ILE THR GLY GLY LEU GLY GLY ILE PRO GLY LEU PHE MODRES 1YBX MSE A 23 MET SELENOMETHIONINE MODRES 1YBX MSE A 27 MET SELENOMETHIONINE MODRES 1YBX MSE A 75 MET SELENOMETHIONINE MODRES 1YBX MSE A 94 MET SELENOMETHIONINE MODRES 1YBX MSE B 23 MET SELENOMETHIONINE MODRES 1YBX MSE B 27 MET SELENOMETHIONINE MODRES 1YBX MSE B 75 MET SELENOMETHIONINE MODRES 1YBX MSE B 94 MET SELENOMETHIONINE HET MSE A 23 8 HET MSE A 27 8 HET MSE A 75 8 HET MSE A 94 8 HET MSE B 23 8 HET MSE B 27 16 HET MSE B 75 8 HET MSE B 94 8 HET UNX A 201 1 HET UNX A 202 1 HET UNX A 203 1 HET UNX B 204 1 HETNAM MSE SELENOMETHIONINE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 UNX 4(X) FORMUL 7 HOH *90(H2 O) HELIX 1 1 ILE A 13 LYS A 37 1 25 HELIX 2 2 PRO A 65 VAL A 68 5 4 HELIX 3 3 ASP A 72 THR A 103 1 32 HELIX 4 4 ASN B 12 LYS B 37 1 26 HELIX 5 5 PRO B 65 VAL B 68 5 4 HELIX 6 6 ASP B 72 ILE B 102 1 31 SHEET 1 A 3 THR A 38 ALA A 43 0 SHEET 2 A 3 VAL A 48 THR A 53 -1 O VAL A 50 N ALA A 41 SHEET 3 A 3 ILE A 58 ILE A 63 -1 O LYS A 59 N VAL A 51 SHEET 1 B 3 THR B 38 ALA B 43 0 SHEET 2 B 3 VAL B 48 THR B 53 -1 O VAL B 50 N ALA B 41 SHEET 3 B 3 ILE B 58 ILE B 63 -1 O LYS B 59 N VAL B 51 LINK C LYS A 22 N MSE A 23 1555 1555 1.33 LINK C MSE A 23 N GLN A 24 1555 1555 1.32 LINK C ASP A 26 N MSE A 27 1555 1555 1.32 LINK C MSE A 27 N GLU A 28 1555 1555 1.34 LINK C GLU A 74 N MSE A 75 1555 1555 1.33 LINK C MSE A 75 N LEU A 76 1555 1555 1.34 LINK C GLU A 93 N MSE A 94 1555 1555 1.34 LINK C MSE A 94 N VAL A 95 1555 1555 1.33 LINK C LYS B 22 N MSE B 23 1555 1555 1.33 LINK C MSE B 23 N GLN B 24 1555 1555 1.33 LINK C ASP B 26 N BMSE B 27 1555 1555 1.34 LINK C ASP B 26 N AMSE B 27 1555 1555 1.33 LINK C BMSE B 27 N GLU B 28 1555 1555 1.33 LINK C AMSE B 27 N GLU B 28 1555 1555 1.33 LINK C GLU B 74 N MSE B 75 1555 1555 1.33 LINK C MSE B 75 N LEU B 76 1555 1555 1.32 LINK C GLU B 93 N MSE B 94 1555 1555 1.33 LINK C MSE B 94 N VAL B 95 1555 1555 1.33 SITE 1 AC1 3 LYS A 64 PRO A 65 GLU A 66 SITE 1 AC2 3 ALA A 82 GLU A 86 ARG A 89 SITE 1 AC3 1 GLY B 44 CRYST1 49.914 36.792 61.824 90.00 111.93 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020000 0.000000 0.008100 0.00000 SCALE2 0.000000 0.027200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017400 0.00000