HEADER HYDROLASE/INHIBITOR 21-DEC-04 1YC0 TITLE SHORT FORM HGFA WITH FIRST KUNITZ DOMAIN FROM HAI-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPATOCYTE GROWTH FACTOR ACTIVATOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 373-655; COMPND 5 SYNONYM: HGF ACTIVATOR, HGFA; COMPND 6 EC: 3.4.21.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: KUNITZ-TYPE PROTEASE INHIBITOR 1; COMPND 10 CHAIN: I; COMPND 11 FRAGMENT: SEQUENCE DATABASE RESIDUES 245-303; COMPND 12 SYNONYM: HEPATOCYTE GROWTH FACTOR ACTIVATOR INHIBITOR TYPE 1, HAI-1, COMPND 13 KUNITZ DOMAIN FROM HAI-1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HGFAC; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PACGP67A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: SPINT1, HAI1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: 58F3; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PKD1 KEYWDS HYDROLASE/INHIBITOR, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.SHIA,J.STAMOS,D.KIRCHHOFER,B.FAN,J.WU,R.T.CORPUZ,L.SANTELL, AUTHOR 2 R.A.LAZARUS,C.EIGENBROT REVDAT 5 30-OCT-24 1YC0 1 REMARK REVDAT 4 23-AUG-23 1YC0 1 REMARK SEQADV REVDAT 3 13-JUL-11 1YC0 1 VERSN REVDAT 2 24-FEB-09 1YC0 1 VERSN REVDAT 1 15-FEB-05 1YC0 0 JRNL AUTH S.SHIA,J.STAMOS,D.KIRCHHOFER,B.FAN,J.WU,R.T.CORPUZ, JRNL AUTH 2 L.SANTELL,R.A.LAZARUS,C.EIGENBROT JRNL TITL CONFORMATIONAL LABILITY IN SERINE PROTEASE ACTIVE SITES: JRNL TITL 2 STRUCTURES OF HEPATOCYTE GROWTH FACTOR ACTIVATOR (HGFA) JRNL TITL 3 ALONE AND WITH THE INHIBITORY DOMAIN FROM HGFA INHIBITOR-1B. JRNL REF J.MOL.BIOL. V. 346 1335 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15713485 JRNL DOI 10.1016/J.JMB.2004.12.048 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.07 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 966 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2566 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2429 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 119 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 55.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : 0.40000 REMARK 3 B33 (A**2) : -0.61000 REMARK 3 B12 (A**2) : 0.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.296 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.218 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.764 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2511 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3409 ; 1.096 ; 1.939 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 310 ; 3.944 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;34.754 ;22.895 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 385 ;12.888 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;15.217 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 351 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1954 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1171 ; 0.228 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 164 ; 0.123 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.141 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.110 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1551 ; 2.562 ; 2.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2485 ; 4.495 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 960 ; 3.050 ; 2.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 924 ; 4.766 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 238 I 303 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6542 55.1084 57.4159 REMARK 3 T TENSOR REMARK 3 T11: 0.1936 T22: 0.0178 REMARK 3 T33: 0.1118 T12: -0.0201 REMARK 3 T13: -0.0061 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 0.8421 L22: 0.9059 REMARK 3 L33: 3.9927 L12: 0.0928 REMARK 3 L13: -0.3309 L23: -0.3194 REMARK 3 S TENSOR REMARK 3 S11: 0.1435 S12: 0.0345 S13: -0.0550 REMARK 3 S21: 0.1320 S22: -0.1412 S23: 0.1242 REMARK 3 S31: 0.1331 S32: -0.1698 S33: -0.0023 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 408 A 646 REMARK 3 ORIGIN FOR THE GROUP (A): -2.7356 65.4459 33.0609 REMARK 3 T TENSOR REMARK 3 T11: 0.1643 T22: 0.0506 REMARK 3 T33: 0.0851 T12: 0.0906 REMARK 3 T13: -0.0171 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.6342 L22: 0.8179 REMARK 3 L33: 0.5925 L12: -0.2395 REMARK 3 L13: -0.0057 L23: 0.1552 REMARK 3 S TENSOR REMARK 3 S11: 0.0736 S12: 0.0190 S13: 0.0401 REMARK 3 S21: -0.0661 S22: -0.0655 S23: -0.0301 REMARK 3 S31: 0.0243 S32: -0.0140 S33: -0.0081 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 393 A 400 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2631 66.8231 19.1141 REMARK 3 T TENSOR REMARK 3 T11: 0.2073 T22: 0.4065 REMARK 3 T33: 0.2392 T12: 0.1896 REMARK 3 T13: 0.1234 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 7.7787 L22: 4.8109 REMARK 3 L33: 12.3328 L12: 5.1122 REMARK 3 L13: 2.7993 L23: -2.4074 REMARK 3 S TENSOR REMARK 3 S11: 0.1442 S12: 1.8066 S13: -0.6428 REMARK 3 S21: -0.1984 S22: -0.1130 S23: -1.7561 REMARK 3 S31: 0.2057 S32: 1.8333 S33: -0.0312 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YC0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000031361. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17975 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.40700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1FAK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% MPD, PH 8.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.74533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 117.49067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 117.49067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.74533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 373 REMARK 465 GLN A 374 REMARK 465 LEU A 375 REMARK 465 SER A 376 REMARK 465 PRO A 377 REMARK 465 ASP A 378 REMARK 465 LEU A 379 REMARK 465 LEU A 380 REMARK 465 ALA A 381 REMARK 465 THR A 382 REMARK 465 LEU A 383 REMARK 465 PRO A 384 REMARK 465 GLU A 385 REMARK 465 PRO A 386 REMARK 465 ALA A 387 REMARK 465 SER A 388 REMARK 465 PRO A 389 REMARK 465 GLY A 390 REMARK 465 ARG A 391 REMARK 465 GLN A 392 REMARK 465 ARG A 401 REMARK 465 THR A 402 REMARK 465 PHE A 403 REMARK 465 LEU A 404 REMARK 465 ARG A 405 REMARK 465 PRO A 406 REMARK 465 ARG A 407 REMARK 465 PRO A 647 REMARK 465 PRO A 648 REMARK 465 ARG A 649 REMARK 465 ARG A 650 REMARK 465 LEU A 651 REMARK 465 VAL A 652 REMARK 465 ALA A 653 REMARK 465 PRO A 654 REMARK 465 SER A 655 REMARK 465 MET I 229 REMARK 465 LYS I 230 REMARK 465 HIS I 231 REMARK 465 GLN I 232 REMARK 465 HIS I 233 REMARK 465 GLN I 234 REMARK 465 HIS I 235 REMARK 465 GLN I 236 REMARK 465 HIS I 237 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 398 -18.69 73.31 REMARK 500 HIS A 465 -50.12 -123.27 REMARK 500 CYS A 510 -107.00 -106.91 REMARK 500 VAL A 572 -105.74 -101.83 REMARK 500 ASP A 588 62.76 -110.59 REMARK 500 CYS A 589 80.25 24.29 REMARK 500 LYS A 590 -119.82 -125.05 REMARK 500 ASP A 592 167.77 179.24 REMARK 500 SER A 617 -64.81 -127.89 REMARK 500 HIS A 626 -2.13 71.90 REMARK 500 ILE A 645 67.28 -106.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 I 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YBW RELATED DB: PDB REMARK 900 SHORT FORM HGFA ALONE DBREF 1YC0 A 373 655 UNP Q04756 HGFA_HUMAN 373 655 DBREF 1YC0 I 245 303 UNP O43278 SPIT1_HUMAN 245 303 SEQADV 1YC0 MET I 229 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 LYS I 230 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 HIS I 231 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 GLN I 232 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 HIS I 233 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 GLN I 234 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 HIS I 235 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 GLN I 236 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 HIS I 237 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 GLN I 238 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 HIS I 239 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 GLN I 240 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 HIS I 241 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 GLN I 242 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 MET I 243 UNP O43278 CLONING ARTIFACT SEQADV 1YC0 HIS I 244 UNP O43278 CLONING ARTIFACT SEQRES 1 A 283 VAL GLN LEU SER PRO ASP LEU LEU ALA THR LEU PRO GLU SEQRES 2 A 283 PRO ALA SER PRO GLY ARG GLN ALA CYS GLY ARG ARG HIS SEQRES 3 A 283 LYS LYS ARG THR PHE LEU ARG PRO ARG ILE ILE GLY GLY SEQRES 4 A 283 SER SER SER LEU PRO GLY SER HIS PRO TRP LEU ALA ALA SEQRES 5 A 283 ILE TYR ILE GLY ASP SER PHE CYS ALA GLY SER LEU VAL SEQRES 6 A 283 HIS THR CYS TRP VAL VAL SER ALA ALA HIS CYS PHE SER SEQRES 7 A 283 HIS SER PRO PRO ARG ASP SER VAL SER VAL VAL LEU GLY SEQRES 8 A 283 GLN HIS PHE PHE ASN ARG THR THR ASP VAL THR GLN THR SEQRES 9 A 283 PHE GLY ILE GLU LYS TYR ILE PRO TYR THR LEU TYR SER SEQRES 10 A 283 VAL PHE ASN PRO SER ASP HIS ASP LEU VAL LEU ILE ARG SEQRES 11 A 283 LEU LYS LYS LYS GLY ASP ARG CYS ALA THR ARG SER GLN SEQRES 12 A 283 PHE VAL GLN PRO ILE CYS LEU PRO GLU PRO GLY SER THR SEQRES 13 A 283 PHE PRO ALA GLY HIS LYS CYS GLN ILE ALA GLY TRP GLY SEQRES 14 A 283 HIS LEU ASP GLU ASN VAL SER GLY TYR SER SER SER LEU SEQRES 15 A 283 ARG GLU ALA LEU VAL PRO LEU VAL ALA ASP HIS LYS CYS SEQRES 16 A 283 SER SER PRO GLU VAL TYR GLY ALA ASP ILE SER PRO ASN SEQRES 17 A 283 MET LEU CYS ALA GLY TYR PHE ASP CYS LYS SER ASP ALA SEQRES 18 A 283 CYS GLN GLY ASP SER GLY GLY PRO LEU ALA CYS GLU LYS SEQRES 19 A 283 ASN GLY VAL ALA TYR LEU TYR GLY ILE ILE SER TRP GLY SEQRES 20 A 283 ASP GLY CYS GLY ARG LEU HIS LYS PRO GLY VAL TYR THR SEQRES 21 A 283 ARG VAL ALA ASN TYR VAL ASP TRP ILE ASN ASP ARG ILE SEQRES 22 A 283 ARG PRO PRO ARG ARG LEU VAL ALA PRO SER SEQRES 1 I 75 MET LYS HIS GLN HIS GLN HIS GLN HIS GLN HIS GLN HIS SEQRES 2 I 75 GLN MET HIS GLN THR GLU ASP TYR CYS LEU ALA SER ASN SEQRES 3 I 75 LYS VAL GLY ARG CYS ARG GLY SER PHE PRO ARG TRP TYR SEQRES 4 I 75 TYR ASP PRO THR GLU GLN ILE CYS LYS SER PHE VAL TYR SEQRES 5 I 75 GLY GLY CYS LEU GLY ASN LYS ASN ASN TYR LEU ARG GLU SEQRES 6 I 75 GLU GLU CYS ILE LEU ALA CYS ARG GLY VAL HET PO4 I 304 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 O4 P 3- FORMUL 4 HOH *119(H2 O) HELIX 1 1 ALA A 445 SER A 450 5 6 HELIX 2 2 PRO A 454 ASP A 456 5 3 HELIX 3 3 ALA A 563 SER A 568 1 6 HELIX 4 4 TYR A 573 ILE A 577 5 5 HELIX 5 5 TYR A 637 ILE A 645 1 9 HELIX 6 6 GLN I 240 LEU I 251 1 12 HELIX 7 7 ARG I 292 CYS I 300 1 9 SHEET 1 A 7 SER A 412 SER A 413 0 SHEET 2 A 7 ARG A 555 PRO A 560 -1 O GLU A 556 N SER A 412 SHEET 3 A 7 LYS A 534 GLY A 539 -1 N CYS A 535 O VAL A 559 SHEET 4 A 7 PRO A 601 LYS A 606 -1 O ALA A 603 N GLN A 536 SHEET 5 A 7 VAL A 609 TRP A 618 -1 O GLY A 614 N LEU A 602 SHEET 6 A 7 GLY A 629 ARG A 633 -1 O VAL A 630 N TRP A 618 SHEET 7 A 7 MET A 581 ALA A 584 -1 N LEU A 582 O TYR A 631 SHEET 1 B 7 GLN A 475 PHE A 477 0 SHEET 2 B 7 VAL A 458 LEU A 462 -1 N LEU A 462 O GLN A 475 SHEET 3 B 7 LEU A 422 ILE A 427 -1 N ALA A 424 O VAL A 461 SHEET 4 B 7 SER A 430 HIS A 438 -1 O CYS A 432 N ILE A 425 SHEET 5 B 7 TRP A 441 SER A 444 -1 O VAL A 443 N SER A 435 SHEET 6 B 7 VAL A 499 LEU A 503 -1 O ILE A 501 N VAL A 442 SHEET 7 B 7 ILE A 479 PRO A 484 -1 N ILE A 483 O LEU A 500 SHEET 1 C 2 PHE I 263 ASP I 269 0 SHEET 2 C 2 ILE I 274 TYR I 280 -1 O LYS I 276 N TYR I 267 SSBOND 1 CYS A 394 CYS A 521 1555 1555 2.02 SSBOND 2 CYS A 432 CYS A 448 1555 1555 2.02 SSBOND 3 CYS A 440 CYS A 510 1555 1555 2.04 SSBOND 4 CYS A 535 CYS A 604 1555 1555 2.03 SSBOND 5 CYS A 567 CYS A 583 1555 1555 2.02 SSBOND 6 CYS A 594 CYS A 622 1555 1555 2.03 SSBOND 7 CYS I 250 CYS I 300 1555 1555 2.03 SSBOND 8 CYS I 259 CYS I 283 1555 1555 2.03 SSBOND 9 CYS I 275 CYS I 296 1555 1555 2.03 SITE 1 AC1 4 HIS A 451 ARG I 265 TYR I 280 HOH I 327 CRYST1 76.218 76.218 176.236 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013120 0.007575 0.000000 0.00000 SCALE2 0.000000 0.015150 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005674 0.00000 TER 1890 ARG A 646 TER 2431 VAL I 303 HETATM 2432 P PO4 I 304 -10.290 64.066 51.987 1.00 75.70 P HETATM 2433 O1 PO4 I 304 -10.343 64.311 50.496 1.00 72.09 O HETATM 2434 O2 PO4 I 304 -9.183 63.104 52.328 1.00 75.98 O HETATM 2435 O3 PO4 I 304 -11.605 63.502 52.459 1.00 78.17 O HETATM 2436 O4 PO4 I 304 -10.035 65.364 52.710 1.00 80.65 O HETATM 2437 O HOH A 656 -3.037 49.063 30.541 1.00 26.69 O HETATM 2438 O HOH A 657 0.213 58.822 36.020 1.00 28.02 O HETATM 2439 O HOH A 658 -19.134 60.792 20.741 1.00 39.02 O HETATM 2440 O HOH A 659 -10.622 57.978 29.031 1.00 20.02 O HETATM 2441 O HOH A 660 8.497 62.237 33.824 1.00 23.71 O HETATM 2442 O HOH A 661 -10.024 71.778 26.147 1.00 30.08 O HETATM 2443 O HOH A 662 -1.141 60.237 33.928 1.00 28.11 O HETATM 2444 O HOH A 663 -12.830 67.984 35.680 1.00 20.93 O HETATM 2445 O HOH A 664 -16.515 70.323 21.948 1.00 27.72 O HETATM 2446 O HOH A 665 -13.374 71.261 16.910 1.00 43.38 O HETATM 2447 O HOH A 666 1.912 76.060 23.820 1.00 43.29 O HETATM 2448 O HOH A 667 -12.791 70.815 35.330 1.00 27.37 O HETATM 2449 O HOH A 668 8.619 61.039 30.602 1.00 26.80 O HETATM 2450 O HOH A 669 -0.718 52.923 33.652 1.00 28.96 O HETATM 2451 O HOH A 670 12.698 56.349 34.608 1.00 23.94 O HETATM 2452 O HOH A 671 -2.611 48.216 38.833 1.00 35.79 O HETATM 2453 O HOH A 672 13.316 79.058 41.361 1.00 42.71 O HETATM 2454 O HOH A 673 -14.574 68.288 21.966 1.00 22.29 O HETATM 2455 O HOH A 674 -9.987 82.061 32.850 1.00 21.64 O HETATM 2456 O HOH A 675 -19.800 67.708 20.588 1.00 21.18 O HETATM 2457 O HOH A 676 -0.805 61.756 26.907 1.00 23.22 O HETATM 2458 O HOH A 677 -3.371 67.145 48.202 1.00 28.06 O HETATM 2459 O HOH A 678 -1.708 65.937 49.982 1.00 18.84 O HETATM 2460 O HOH A 679 4.226 75.219 51.997 1.00 22.87 O HETATM 2461 O HOH A 680 2.371 66.016 51.388 1.00 38.81 O HETATM 2462 O HOH A 681 8.943 64.190 30.862 1.00 34.33 O HETATM 2463 O HOH A 682 9.697 71.261 46.436 1.00 25.32 O HETATM 2464 O HOH A 683 -13.726 73.832 41.921 1.00 26.56 O HETATM 2465 O HOH A 684 -1.520 68.015 32.346 1.00 27.10 O HETATM 2466 O HOH A 685 10.367 60.969 28.585 1.00 32.27 O HETATM 2467 O HOH A 686 -15.110 53.979 33.950 1.00 23.61 O HETATM 2468 O HOH A 687 -12.157 57.010 38.269 1.00 28.33 O HETATM 2469 O HOH A 688 -1.881 53.248 43.366 1.00 34.64 O HETATM 2470 O HOH A 689 14.793 71.832 42.620 1.00 38.94 O HETATM 2471 O HOH A 690 -2.721 85.429 28.375 1.00 34.42 O HETATM 2472 O HOH A 691 9.201 50.753 38.147 1.00 40.43 O HETATM 2473 O HOH A 692 -10.118 61.130 33.005 1.00 40.45 O HETATM 2474 O HOH A 693 0.529 62.449 22.454 1.00 39.67 O HETATM 2475 O HOH A 694 16.696 64.798 30.099 1.00 45.56 O HETATM 2476 O HOH A 695 -11.916 53.699 40.493 1.00 33.02 O HETATM 2477 O HOH A 696 -16.869 68.088 42.476 1.00 28.84 O HETATM 2478 O HOH A 697 -19.101 66.591 38.910 1.00 54.13 O HETATM 2479 O HOH A 698 10.855 62.422 22.570 1.00 40.51 O HETATM 2480 O HOH A 699 -7.926 81.302 29.120 1.00 45.26 O HETATM 2481 O HOH A 700 7.649 59.406 27.801 1.00 27.98 O HETATM 2482 O HOH A 701 9.378 57.282 28.860 1.00 33.28 O HETATM 2483 O HOH A 702 4.451 47.777 24.486 1.00 33.45 O HETATM 2484 O HOH A 703 -8.275 51.995 41.195 1.00 35.08 O HETATM 2485 O HOH A 704 -5.418 82.769 41.193 1.00 31.29 O HETATM 2486 O HOH A 705 -3.966 63.194 17.847 1.00 50.68 O HETATM 2487 O HOH A 706 17.437 53.272 37.619 1.00 27.36 O HETATM 2488 O HOH A 707 -16.093 75.722 41.563 1.00 37.98 O HETATM 2489 O HOH A 708 -16.336 59.674 20.161 1.00 46.74 O HETATM 2490 O HOH A 709 -17.255 65.733 25.788 1.00 27.67 O HETATM 2491 O HOH A 710 11.061 79.176 38.892 1.00 40.07 O HETATM 2492 O HOH A 711 -14.170 54.176 30.180 1.00 27.50 O HETATM 2493 O HOH A 712 16.634 62.700 38.418 1.00 25.93 O HETATM 2494 O HOH A 713 2.179 77.138 46.789 1.00 37.38 O HETATM 2495 O HOH A 714 -13.208 52.290 28.477 1.00 54.56 O HETATM 2496 O HOH A 715 5.043 54.398 22.978 1.00 32.19 O HETATM 2497 O HOH A 716 -5.306 47.030 31.604 1.00 36.85 O HETATM 2498 O HOH A 717 -8.679 84.249 32.236 1.00 32.64 O HETATM 2499 O HOH A 718 -19.581 59.303 39.322 1.00 42.44 O HETATM 2500 O HOH A 719 -22.230 67.113 21.206 1.00 30.66 O HETATM 2501 O HOH A 720 1.288 62.634 25.373 1.00 32.57 O HETATM 2502 O HOH A 721 -13.889 80.002 34.777 1.00 48.86 O HETATM 2503 O HOH A 722 16.811 47.769 41.620 1.00 37.31 O HETATM 2504 O HOH A 723 20.613 55.323 33.769 1.00 31.07 O HETATM 2505 O HOH A 724 8.335 81.957 33.996 1.00 46.02 O HETATM 2506 O HOH A 725 5.268 82.892 40.132 1.00 41.49 O HETATM 2507 O HOH A 726 -0.093 72.513 14.735 1.00 51.27 O HETATM 2508 O HOH A 727 -21.507 51.083 34.453 1.00 32.92 O HETATM 2509 O HOH A 728 14.101 57.571 32.489 1.00 49.13 O HETATM 2510 O HOH A 729 8.698 49.875 29.049 1.00 45.20 O HETATM 2511 O HOH A 730 -16.244 52.220 29.116 1.00 35.84 O HETATM 2512 O HOH A 731 3.737 74.955 25.942 1.00 49.30 O HETATM 2513 O HOH A 732 -12.715 71.988 24.523 1.00 49.95 O HETATM 2514 O HOH A 733 -13.006 75.115 24.151 1.00 44.69 O HETATM 2515 O HOH A 734 -15.611 74.703 23.877 1.00 47.96 O HETATM 2516 O HOH A 735 -14.698 78.198 22.971 1.00 31.18 O HETATM 2517 O HOH A 736 -15.401 77.618 25.348 1.00 46.06 O HETATM 2518 O HOH A 737 11.783 58.586 29.869 1.00 40.75 O HETATM 2519 O HOH A 738 16.490 51.823 39.991 1.00 44.77 O HETATM 2520 O HOH A 739 -2.787 83.606 40.468 1.00 21.77 O HETATM 2521 O HOH A 740 8.940 69.561 21.466 1.00 45.45 O HETATM 2522 O HOH A 741 10.236 77.082 28.067 1.00 37.37 O HETATM 2523 O HOH A 742 -15.391 68.100 49.259 1.00 39.76 O HETATM 2524 O HOH A 743 -12.779 55.437 28.233 1.00 35.71 O HETATM 2525 O HOH A 744 -5.257 80.267 42.715 1.00 38.82 O HETATM 2526 O HOH A 745 -3.099 80.465 44.366 1.00 36.29 O HETATM 2527 O HOH A 746 9.700 47.770 38.634 1.00 42.87 O HETATM 2528 O HOH A 747 -18.467 47.900 33.810 1.00 35.97 O HETATM 2529 O HOH A 748 16.764 73.868 27.446 1.00 35.09 O HETATM 2530 O HOH I 305 -17.123 60.282 43.984 1.00 19.67 O HETATM 2531 O HOH I 306 -11.582 60.506 44.454 1.00 23.01 O HETATM 2532 O HOH I 307 -13.617 55.408 52.651 1.00 20.83 O HETATM 2533 O HOH I 308 -12.160 55.990 69.040 1.00 25.21 O HETATM 2534 O HOH I 309 -0.172 54.562 58.427 1.00 34.27 O HETATM 2535 O HOH I 310 4.033 57.819 62.394 1.00 67.57 O HETATM 2536 O HOH I 311 -14.261 52.501 46.357 1.00 43.90 O HETATM 2537 O HOH I 312 -2.999 60.085 51.028 1.00 32.90 O HETATM 2538 O HOH I 313 -13.150 57.660 51.007 1.00 30.49 O HETATM 2539 O HOH I 314 -8.691 59.007 64.662 1.00 26.22 O HETATM 2540 O HOH I 315 -13.837 55.682 40.812 1.00 35.76 O HETATM 2541 O HOH I 316 -15.590 54.276 42.475 1.00 35.14 O HETATM 2542 O HOH I 317 -11.861 60.189 58.277 1.00 36.30 O HETATM 2543 O HOH I 318 -10.525 66.698 47.084 1.00 28.82 O HETATM 2544 O HOH I 319 -6.531 59.932 65.943 1.00 33.60 O HETATM 2545 O HOH I 320 -6.817 61.980 63.842 1.00 50.61 O HETATM 2546 O HOH I 321 -8.851 60.777 62.599 1.00 40.51 O HETATM 2547 O HOH I 322 -7.449 61.092 59.216 1.00 33.76 O HETATM 2548 O HOH I 323 -3.428 63.694 51.530 1.00 36.08 O HETATM 2549 O HOH I 324 -3.523 65.089 53.860 1.00 37.61 O HETATM 2550 O HOH I 325 1.008 51.737 58.922 1.00 35.76 O HETATM 2551 O HOH I 326 -3.701 46.630 54.645 1.00 38.21 O HETATM 2552 O HOH I 327 -12.687 61.911 53.830 1.00 47.44 O HETATM 2553 O HOH I 328 -12.644 66.281 48.580 1.00 25.06 O HETATM 2554 O HOH I 329 -18.486 64.756 61.071 1.00 34.21 O HETATM 2555 O HOH I 330 -15.986 55.430 44.853 1.00 45.32 O CONECT 11 950 CONECT 244 357 CONECT 297 864 CONECT 357 244 CONECT 864 297 CONECT 950 11 CONECT 1050 1548 CONECT 1292 1407 CONECT 1407 1292 CONECT 1487 1684 CONECT 1548 1050 CONECT 1684 1487 CONECT 2006 2407 CONECT 2070 2271 CONECT 2212 2380 CONECT 2271 2070 CONECT 2380 2212 CONECT 2407 2006 CONECT 2432 2433 2434 2435 2436 CONECT 2433 2432 CONECT 2434 2432 CONECT 2435 2432 CONECT 2436 2432 MASTER 390 0 1 7 16 0 1 6 2553 2 23 28 END