data_1YDH # _entry.id 1YDH # _audit.revision_id 1 _audit.creation_date 2004-12-23 _audit.update_record 'initial release' # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YDH RCSB RCSB031403 WWPDB D_1000031403 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2A33 '60 PERCENT SEQUENCE IDENTITY, SAME FOLD' unspecified TargetDB GO.19912 . unspecified # _pdbx_database_status.entry_id 1YDH _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-12-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wesenberg, G.E.' 1 'Phillips Jr., G.N.' 2 'Bitto, E.' 3 'Bingman, C.A.' 4 'Allard, S.T.M.' 5 'Center for Eukaryotic Structural Genomics (CESG)' 6 # _citation.id primary _citation.title 'X-ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210.' _citation.journal_abbrev Proteins _citation.journal_volume 65 _citation.page_first 1051 _citation.page_last 1054 _citation.year 2006 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17048257 _citation.pdbx_database_id_DOI 10.1002/prot.21166 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jeon, W.B.' 1 primary 'Allard, S.T.M.' 2 primary 'Bingman, C.A.' 3 primary 'Bitto, E.' 4 primary 'Han, B.W.' 5 primary 'Wesenberg, G.E.' 6 primary 'Phillips Jr., G.N.' 7 # _cell.length_a 121.589 _cell.length_b 80.427 _cell.length_c 50.709 _cell.angle_alpha 90.00 _cell.angle_beta 102.97 _cell.angle_gamma 90.00 _cell.entry_id 1YDH _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.Int_Tables_number 5 _symmetry.entry_id 1YDH _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man At5g11950 24239.244 2 ? ? ? ? 2 non-polymer syn 'NITRATE ION' 62.005 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 4 water nat water 18.015 319 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SEDNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGL(MSE)GLISRRVYEGGLHVLGIIPKAL (MSE)PIEISGETVGDVRVVAD(MSE)HERKAA(MSE)AQEAEAFIALPGGYGT(MSE)EELLE(MSE)ITWSQLGIHKK TVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKEL(MSE)EK(MSE)EEYTPSH(MSE)HVASHESWKVEE LGDYPGQENKPQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SEDNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIE ISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE GFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEELGDYPGQENKPQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier GO.19912 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLU n 1 3 ASP n 1 4 ASN n 1 5 GLN n 1 6 ARG n 1 7 SER n 1 8 ARG n 1 9 PHE n 1 10 ARG n 1 11 LYS n 1 12 ILE n 1 13 CYS n 1 14 VAL n 1 15 PHE n 1 16 CYS n 1 17 GLY n 1 18 SER n 1 19 HIS n 1 20 SER n 1 21 GLY n 1 22 HIS n 1 23 ARG n 1 24 GLU n 1 25 VAL n 1 26 PHE n 1 27 SER n 1 28 ASP n 1 29 ALA n 1 30 ALA n 1 31 ILE n 1 32 GLU n 1 33 LEU n 1 34 GLY n 1 35 ASN n 1 36 GLU n 1 37 LEU n 1 38 VAL n 1 39 LYS n 1 40 ARG n 1 41 LYS n 1 42 ILE n 1 43 ASP n 1 44 LEU n 1 45 VAL n 1 46 TYR n 1 47 GLY n 1 48 GLY n 1 49 GLY n 1 50 SER n 1 51 VAL n 1 52 GLY n 1 53 LEU n 1 54 MSE n 1 55 GLY n 1 56 LEU n 1 57 ILE n 1 58 SER n 1 59 ARG n 1 60 ARG n 1 61 VAL n 1 62 TYR n 1 63 GLU n 1 64 GLY n 1 65 GLY n 1 66 LEU n 1 67 HIS n 1 68 VAL n 1 69 LEU n 1 70 GLY n 1 71 ILE n 1 72 ILE n 1 73 PRO n 1 74 LYS n 1 75 ALA n 1 76 LEU n 1 77 MSE n 1 78 PRO n 1 79 ILE n 1 80 GLU n 1 81 ILE n 1 82 SER n 1 83 GLY n 1 84 GLU n 1 85 THR n 1 86 VAL n 1 87 GLY n 1 88 ASP n 1 89 VAL n 1 90 ARG n 1 91 VAL n 1 92 VAL n 1 93 ALA n 1 94 ASP n 1 95 MSE n 1 96 HIS n 1 97 GLU n 1 98 ARG n 1 99 LYS n 1 100 ALA n 1 101 ALA n 1 102 MSE n 1 103 ALA n 1 104 GLN n 1 105 GLU n 1 106 ALA n 1 107 GLU n 1 108 ALA n 1 109 PHE n 1 110 ILE n 1 111 ALA n 1 112 LEU n 1 113 PRO n 1 114 GLY n 1 115 GLY n 1 116 TYR n 1 117 GLY n 1 118 THR n 1 119 MSE n 1 120 GLU n 1 121 GLU n 1 122 LEU n 1 123 LEU n 1 124 GLU n 1 125 MSE n 1 126 ILE n 1 127 THR n 1 128 TRP n 1 129 SER n 1 130 GLN n 1 131 LEU n 1 132 GLY n 1 133 ILE n 1 134 HIS n 1 135 LYS n 1 136 LYS n 1 137 THR n 1 138 VAL n 1 139 GLY n 1 140 LEU n 1 141 LEU n 1 142 ASN n 1 143 VAL n 1 144 ASP n 1 145 GLY n 1 146 TYR n 1 147 TYR n 1 148 ASN n 1 149 ASN n 1 150 LEU n 1 151 LEU n 1 152 ALA n 1 153 LEU n 1 154 PHE n 1 155 ASP n 1 156 THR n 1 157 GLY n 1 158 VAL n 1 159 GLU n 1 160 GLU n 1 161 GLY n 1 162 PHE n 1 163 ILE n 1 164 LYS n 1 165 PRO n 1 166 GLY n 1 167 ALA n 1 168 ARG n 1 169 ASN n 1 170 ILE n 1 171 VAL n 1 172 VAL n 1 173 SER n 1 174 ALA n 1 175 PRO n 1 176 THR n 1 177 ALA n 1 178 LYS n 1 179 GLU n 1 180 LEU n 1 181 MSE n 1 182 GLU n 1 183 LYS n 1 184 MSE n 1 185 GLU n 1 186 GLU n 1 187 TYR n 1 188 THR n 1 189 PRO n 1 190 SER n 1 191 HIS n 1 192 MSE n 1 193 HIS n 1 194 VAL n 1 195 ALA n 1 196 SER n 1 197 HIS n 1 198 GLU n 1 199 SER n 1 200 TRP n 1 201 LYS n 1 202 VAL n 1 203 GLU n 1 204 GLU n 1 205 LEU n 1 206 GLY n 1 207 ASP n 1 208 TYR n 1 209 PRO n 1 210 GLY n 1 211 GLN n 1 212 GLU n 1 213 ASN n 1 214 LYS n 1 215 PRO n 1 216 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'thale cress' _entity_src_gen.gene_src_genus Arabidopsis _entity_src_gen.pdbx_gene_src_gene AT5G11950 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3) P(LACI+RARE)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PVP-13 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y5195_ARATH _struct_ref.pdbx_db_accession Q84MC2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEDNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIE ISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE GFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEELGDYPGQENKPQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YDH A 1 ? 216 ? Q84MC2 1 ? 216 ? 1 216 2 1 1YDH B 1 ? 216 ? Q84MC2 1 ? 216 ? 1 216 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YDH SER A 1 ? UNP Q84MC2 MET 1 'CLONING ARTIFACT' 1 1 1 1YDH MSE A 54 ? UNP Q84MC2 MET 54 'MODIFIED RESIDUE' 54 2 1 1YDH MSE A 77 ? UNP Q84MC2 MET 77 'MODIFIED RESIDUE' 77 3 1 1YDH MSE A 95 ? UNP Q84MC2 MET 95 'MODIFIED RESIDUE' 95 4 1 1YDH MSE A 102 ? UNP Q84MC2 MET 102 'MODIFIED RESIDUE' 102 5 1 1YDH MSE A 119 ? UNP Q84MC2 MET 119 'MODIFIED RESIDUE' 119 6 1 1YDH MSE A 125 ? UNP Q84MC2 MET 125 'MODIFIED RESIDUE' 125 7 1 1YDH MSE A 181 ? UNP Q84MC2 MET 181 'MODIFIED RESIDUE' 181 8 1 1YDH MSE A 184 ? UNP Q84MC2 MET 184 'MODIFIED RESIDUE' 184 9 1 1YDH MSE A 192 ? UNP Q84MC2 MET 192 'MODIFIED RESIDUE' 192 10 2 1YDH SER B 1 ? UNP Q84MC2 MET 1 'CLONING ARTIFACT' 1 11 2 1YDH MSE B 54 ? UNP Q84MC2 MET 54 'MODIFIED RESIDUE' 54 12 2 1YDH MSE B 77 ? UNP Q84MC2 MET 77 'MODIFIED RESIDUE' 77 13 2 1YDH MSE B 95 ? UNP Q84MC2 MET 95 'MODIFIED RESIDUE' 95 14 2 1YDH MSE B 102 ? UNP Q84MC2 MET 102 'MODIFIED RESIDUE' 102 15 2 1YDH MSE B 119 ? UNP Q84MC2 MET 119 'MODIFIED RESIDUE' 119 16 2 1YDH MSE B 125 ? UNP Q84MC2 MET 125 'MODIFIED RESIDUE' 125 17 2 1YDH MSE B 181 ? UNP Q84MC2 MET 181 'MODIFIED RESIDUE' 181 18 2 1YDH MSE B 184 ? UNP Q84MC2 MET 184 'MODIFIED RESIDUE' 184 19 2 1YDH MSE B 192 ? UNP Q84MC2 MET 192 'MODIFIED RESIDUE' 192 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YDH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.63 _exptl_crystal.description 'UNMODELED DENSITY BETWEEN ASP 94A AND ILE 133B IS POSSIBLY DUE TO AN L-LYSINE MOLECULE' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details '10 MG/ML PROTEIN, 13% MPEG 2K, 0.28 M POTASSIUM NITRATE, 0.1 M MOPS, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 7.00' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type APS-1 _diffrn_detector.pdbx_collection_date 2004-12-15 _diffrn_detector.details 'SAGITALLY FOCUSING 2ND CRYSTAL, ROSENBAUM-ROCK VERTICAL FOCUSING MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'ROSENBAUM-ROCK DOUBLE-CRYSTAL MONOCHROMATOR: WATER COOLED' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97940 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength 0.97940 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1YDH _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.451 _reflns.d_resolution_high 2.152 _reflns.number_obs 25771 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.384 _reflns.pdbx_chi_squared 0.951 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.2660 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.900 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_all _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.number_unique_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_obs _reflns_shell.pdbx_redundancy _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.23 2.15 2460 100.000 0.384 0.657 ? 2.401 ? ? 6.2 ? ? ? 1 2.37 2.28 2474 100.000 0.33 0.650 ? ? ? ? ? ? ? ? 2 2.48 2.37 2465 100.000 0.31 0.691 ? ? ? ? ? ? ? ? 3 2.61 2.48 2482 100.000 0.258 0.802 ? ? ? ? ? ? ? ? 4 2.77 2.61 2468 100.000 0.229 0.939 ? ? ? ? ? ? ? ? 5 2.99 2.77 2481 100.000 0.197 1.092 ? ? ? ? ? ? ? ? 6 3.29 2.99 2473 100.000 0.166 1.157 ? ? ? ? ? ? ? ? 7 3.76 3.29 2489 100.000 0.142 1.209 ? ? ? ? ? ? ? ? 8 4.74 3.76 2500 100.000 0.127 1.163 ? ? ? ? ? ? ? ? 9 50.00 4.74 2537 99.600 0.119 1.105 ? ? ? ? ? ? ? ? 10 # _refine.entry_id 1YDH _refine.ls_number_reflns_obs 25679 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.45 _refine.ls_d_res_high 2.152 _refine.ls_percent_reflns_obs 99.1 _refine.ls_R_factor_obs 0.16164 _refine.ls_R_factor_all 0.16164 _refine.ls_R_factor_R_work 0.159 _refine.ls_R_factor_R_free 0.213 _refine.ls_wR_factor_R_work 0.159 _refine.ls_wR_factor_R_free 0.212 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.063 _refine.ls_number_reflns_R_free 1300 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.B_iso_mean 31.14 _refine.aniso_B[1][1] 0.91500 _refine.aniso_B[2][2] -0.15800 _refine.aniso_B[3][3] -0.58400 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.38600 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS, SELENIUM C COEFFICIENT FOR STRUCTURE FACTOR CALCULATION SET TO -9.0000, MOLPROBITY USED TO ASSIST IN FINAL MODEL BUILDING ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.180 _refine.pdbx_overall_ESU_R_Free 0.168 _refine.overall_SU_ML 0.117 _refine.overall_SU_B 4.455 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2798 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 319 _refine_hist.number_atoms_total 3137 _refine_hist.d_res_high 2.152 _refine_hist.d_res_low 35.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.022 ? 2859 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.939 1.980 ? 3839 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.547 5.000 ? 363 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.733 23.729 ? 118 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.836 15.000 ? 516 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.845 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.112 0.200 ? 429 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 2111 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.212 0.200 ? 1397 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.302 0.200 ? 1968 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.199 0.200 ? 271 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.271 0.200 ? 36 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.170 0.200 ? 21 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.579 2.000 ? 1872 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.656 4.000 ? 2860 'X-RAY DIFFRACTION' ? r_scbond_it 5.121 6.000 ? 1136 'X-RAY DIFFRACTION' ? r_scangle_it 6.985 8.000 ? 979 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 2.208 2.152 1911 92.674 1698 0.188 73 0.304 . . . . . 'X-RAY DIFFRACTION' 20 2.268 2.208 1852 99.622 1740 0.184 105 0.223 . . . . . 'X-RAY DIFFRACTION' 20 2.334 2.268 1797 99.722 1717 0.176 75 0.255 . . . . . 'X-RAY DIFFRACTION' 20 2.405 2.334 1770 99.718 1667 0.182 98 0.254 . . . . . 'X-RAY DIFFRACTION' 20 2.484 2.405 1668 99.820 1576 0.182 89 0.26 . . . . . 'X-RAY DIFFRACTION' 20 2.571 2.484 1659 99.759 1575 0.172 80 0.292 . . . . . 'X-RAY DIFFRACTION' 20 2.668 2.571 1607 99.378 1516 0.176 81 0.268 . . . . . 'X-RAY DIFFRACTION' 20 2.777 2.668 1523 99.672 1434 0.174 84 0.199 . . . . . 'X-RAY DIFFRACTION' 20 2.900 2.777 1468 99.046 1386 0.173 68 0.218 . . . . . 'X-RAY DIFFRACTION' 20 3.041 2.900 1403 99.644 1323 0.159 75 0.219 . . . . . 'X-RAY DIFFRACTION' 20 3.206 3.041 1347 99.332 1271 0.161 67 0.211 . . . . . 'X-RAY DIFFRACTION' 20 3.400 3.206 1265 99.368 1186 0.15 71 0.199 . . . . . 'X-RAY DIFFRACTION' 20 3.634 3.400 1206 99.668 1142 0.144 60 0.212 . . . . . 'X-RAY DIFFRACTION' 20 3.924 3.634 1101 99.546 1042 0.137 54 0.199 . . . . . 'X-RAY DIFFRACTION' 20 4.297 3.924 1025 100.000 964 0.136 61 0.167 . . . . . 'X-RAY DIFFRACTION' 20 4.801 4.297 925 100.000 885 0.13 40 0.175 . . . . . 'X-RAY DIFFRACTION' 20 5.539 4.801 819 100.000 782 0.144 37 0.188 . . . . . 'X-RAY DIFFRACTION' 20 6.773 5.539 709 100.000 675 0.18 34 0.19 . . . . . 'X-RAY DIFFRACTION' 20 9.529 6.773 542 100.000 512 0.165 30 0.214 . . . . . 'X-RAY DIFFRACTION' 20 66.519 9.529 320 95.625 288 0.177 18 0.179 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 1YDH _struct.title 'X-ray structure of a lysine decarboxylase-like protein from arabidopsis thaliana gene at5g11950' _struct.pdbx_descriptor At5g11950 _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, Center for Eukaryotic Structural Genomics, CESG, AT5G11950, LYSINE DECARBOXYLASE-LIKE PROTEIN, UNKNOWN FUNCTION ; _struct_keywords.entry_id 1YDH _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 23 ? ARG A 40 ? ARG A 23 ARG A 40 1 ? 18 HELX_P HELX_P2 2 VAL A 51 ? GLY A 64 ? VAL A 51 GLY A 64 1 ? 14 HELX_P HELX_P3 3 LEU A 76 ? ILE A 81 ? LEU A 76 ILE A 81 1 ? 6 HELX_P HELX_P4 4 ASP A 94 ? ALA A 106 ? ASP A 94 ALA A 106 1 ? 13 HELX_P HELX_P5 5 GLY A 115 ? LEU A 131 ? GLY A 115 LEU A 131 1 ? 17 HELX_P HELX_P6 6 VAL A 143 ? TYR A 146 ? VAL A 143 TYR A 146 5 ? 4 HELX_P HELX_P7 7 TYR A 147 ? GLU A 160 ? TYR A 147 GLU A 160 1 ? 14 HELX_P HELX_P8 8 LYS A 164 ? ASN A 169 ? LYS A 164 ASN A 169 1 ? 6 HELX_P HELX_P9 9 THR A 176 ? TYR A 187 ? THR A 176 TYR A 187 1 ? 12 HELX_P HELX_P10 10 GLU B 24 ? ARG B 40 ? GLU B 24 ARG B 40 1 ? 17 HELX_P HELX_P11 11 VAL B 51 ? GLY B 64 ? VAL B 51 GLY B 64 1 ? 14 HELX_P HELX_P12 12 LEU B 76 ? ILE B 81 ? LEU B 76 ILE B 81 1 ? 6 HELX_P HELX_P13 13 ASP B 94 ? ALA B 106 ? ASP B 94 ALA B 106 1 ? 13 HELX_P HELX_P14 14 GLY B 115 ? LEU B 131 ? GLY B 115 LEU B 131 1 ? 17 HELX_P HELX_P15 15 VAL B 143 ? TYR B 146 ? VAL B 143 TYR B 146 5 ? 4 HELX_P HELX_P16 16 TYR B 147 ? GLU B 160 ? TYR B 147 GLU B 160 1 ? 14 HELX_P HELX_P17 17 LYS B 164 ? ASN B 169 ? LYS B 164 ASN B 169 1 ? 6 HELX_P HELX_P18 18 THR B 176 ? TYR B 187 ? THR B 176 TYR B 187 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 53 C ? ? ? 1_555 A MSE 54 N ? ? A LEU 53 A MSE 54 1_555 ? ? ? ? ? ? ? 1.338 ? covale2 covale ? ? A MSE 54 C ? ? ? 1_555 A GLY 55 N ? ? A MSE 54 A GLY 55 1_555 ? ? ? ? ? ? ? 1.335 ? covale3 covale ? ? A LEU 76 C ? ? ? 1_555 A MSE 77 N ? ? A LEU 76 A MSE 77 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 77 C ? ? ? 1_555 A PRO 78 N ? ? A MSE 77 A PRO 78 1_555 ? ? ? ? ? ? ? 1.367 ? covale5 covale ? ? A ASP 94 C ? ? ? 1_555 A MSE 95 N ? ? A ASP 94 A MSE 95 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale ? ? A MSE 95 C ? ? ? 1_555 A HIS 96 N ? ? A MSE 95 A HIS 96 1_555 ? ? ? ? ? ? ? 1.324 ? covale7 covale ? ? A ALA 101 C ? ? ? 1_555 A MSE 102 N ? ? A ALA 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? A MSE 102 C ? ? ? 1_555 A ALA 103 N ? ? A MSE 102 A ALA 103 1_555 ? ? ? ? ? ? ? 1.335 ? covale9 covale ? ? A THR 118 C ? ? ? 1_555 A MSE 119 N ? ? A THR 118 A MSE 119 1_555 ? ? ? ? ? ? ? 1.331 ? covale10 covale ? ? A MSE 119 C ? ? ? 1_555 A GLU 120 N ? ? A MSE 119 A GLU 120 1_555 ? ? ? ? ? ? ? 1.330 ? covale11 covale ? ? A GLU 124 C ? ? ? 1_555 A MSE 125 N ? ? A GLU 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.332 ? covale12 covale ? ? A MSE 125 C ? ? ? 1_555 A ILE 126 N ? ? A MSE 125 A ILE 126 1_555 ? ? ? ? ? ? ? 1.326 ? covale13 covale ? ? A LEU 180 C ? ? ? 1_555 A MSE 181 N ? ? A LEU 180 A MSE 181 1_555 ? ? ? ? ? ? ? 1.326 ? covale14 covale ? ? A MSE 181 C ? ? ? 1_555 A GLU 182 N ? ? A MSE 181 A GLU 182 1_555 ? ? ? ? ? ? ? 1.328 ? covale15 covale ? ? A LYS 183 C ? ? ? 1_555 A MSE 184 N ? ? A LYS 183 A MSE 184 1_555 ? ? ? ? ? ? ? 1.331 ? covale16 covale ? ? A MSE 184 C ? ? ? 1_555 A GLU 185 N ? ? A MSE 184 A GLU 185 1_555 ? ? ? ? ? ? ? 1.332 ? covale17 covale ? ? B LEU 53 C ? ? ? 1_555 B MSE 54 N ? ? B LEU 53 B MSE 54 1_555 ? ? ? ? ? ? ? 1.335 ? covale18 covale ? ? B MSE 54 C ? ? ? 1_555 B GLY 55 N ? ? B MSE 54 B GLY 55 1_555 ? ? ? ? ? ? ? 1.331 ? covale19 covale ? ? B LEU 76 C ? ? ? 1_555 B MSE 77 N ? ? B LEU 76 B MSE 77 1_555 ? ? ? ? ? ? ? 1.325 ? covale20 covale ? ? B MSE 77 C ? ? ? 1_555 B PRO 78 N ? ? B MSE 77 B PRO 78 1_555 ? ? ? ? ? ? ? 1.355 ? covale21 covale ? ? B ASP 94 C ? ? ? 1_555 B MSE 95 N ? ? B ASP 94 B MSE 95 1_555 ? ? ? ? ? ? ? 1.336 ? covale22 covale ? ? B MSE 95 C ? ? ? 1_555 B HIS 96 N ? ? B MSE 95 B HIS 96 1_555 ? ? ? ? ? ? ? 1.336 ? covale23 covale ? ? B ALA 101 C ? ? ? 1_555 B MSE 102 N ? ? B ALA 101 B MSE 102 1_555 ? ? ? ? ? ? ? 1.324 ? covale24 covale ? ? B MSE 102 C ? ? ? 1_555 B ALA 103 N ? ? B MSE 102 B ALA 103 1_555 ? ? ? ? ? ? ? 1.349 ? covale25 covale ? ? B THR 118 C ? ? ? 1_555 B MSE 119 N ? ? B THR 118 B MSE 119 1_555 ? ? ? ? ? ? ? 1.338 ? covale26 covale ? ? B MSE 119 C ? ? ? 1_555 B GLU 120 N ? ? B MSE 119 B GLU 120 1_555 ? ? ? ? ? ? ? 1.328 ? covale27 covale ? ? B GLU 124 C ? ? ? 1_555 B MSE 125 N ? ? B GLU 124 B MSE 125 1_555 ? ? ? ? ? ? ? 1.339 ? covale28 covale ? ? B MSE 125 C ? ? ? 1_555 B ILE 126 N ? ? B MSE 125 B ILE 126 1_555 ? ? ? ? ? ? ? 1.337 ? covale29 covale ? ? B LEU 180 C ? ? ? 1_555 B MSE 181 N ? ? B LEU 180 B MSE 181 1_555 ? ? ? ? ? ? ? 1.326 ? covale30 covale ? ? B MSE 181 C ? ? ? 1_555 B GLU 182 N ? ? B MSE 181 B GLU 182 1_555 ? ? ? ? ? ? ? 1.329 ? covale31 covale ? ? B LYS 183 C ? ? ? 1_555 B MSE 184 N ? ? B LYS 183 B MSE 184 1_555 ? ? ? ? ? ? ? 1.329 ? covale32 covale ? ? B MSE 184 C ? ? ? 1_555 B GLU 185 N ? ? B MSE 184 B GLU 185 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 88 ? VAL A 92 ? ASP A 88 VAL A 92 A 2 VAL A 68 ? PRO A 73 ? VAL A 68 PRO A 73 A 3 ASP A 43 ? TYR A 46 ? ASP A 43 TYR A 46 A 4 LYS A 11 ? PHE A 15 ? LYS A 11 PHE A 15 A 5 ALA A 108 ? ALA A 111 ? ALA A 108 ALA A 111 A 6 THR A 137 ? LEU A 141 ? THR A 137 LEU A 141 A 7 VAL A 171 ? ALA A 174 ? VAL A 171 ALA A 174 B 1 ASP B 88 ? VAL B 92 ? ASP B 88 VAL B 92 B 2 VAL B 68 ? PRO B 73 ? VAL B 68 PRO B 73 B 3 ASP B 43 ? TYR B 46 ? ASP B 43 TYR B 46 B 4 LYS B 11 ? PHE B 15 ? LYS B 11 PHE B 15 B 5 ALA B 108 ? ALA B 111 ? ALA B 108 ALA B 111 B 6 THR B 137 ? LEU B 141 ? THR B 137 LEU B 141 B 7 VAL B 171 ? ALA B 174 ? VAL B 171 ALA B 174 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 90 ? O ARG A 90 N GLY A 70 ? N GLY A 70 A 2 3 O LEU A 69 ? O LEU A 69 N LEU A 44 ? N LEU A 44 A 3 4 O VAL A 45 ? O VAL A 45 N VAL A 14 ? N VAL A 14 A 4 5 N CYS A 13 ? N CYS A 13 O ALA A 108 ? O ALA A 108 A 5 6 N PHE A 109 ? N PHE A 109 O GLY A 139 ? O GLY A 139 A 6 7 N VAL A 138 ? N VAL A 138 O VAL A 172 ? O VAL A 172 B 1 2 O ASP B 88 ? O ASP B 88 N GLY B 70 ? N GLY B 70 B 2 3 O LEU B 69 ? O LEU B 69 N TYR B 46 ? N TYR B 46 B 3 4 O ASP B 43 ? O ASP B 43 N ILE B 12 ? N ILE B 12 B 4 5 N PHE B 15 ? N PHE B 15 O ILE B 110 ? O ILE B 110 B 5 6 N PHE B 109 ? N PHE B 109 O THR B 137 ? O THR B 137 B 6 7 N VAL B 138 ? N VAL B 138 O VAL B 172 ? O VAL B 172 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE NO3 A 600' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO B 700' AC3 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE EDO A 701' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO B 702' AC5 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE EDO A 703' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU A 84 ? GLU A 84 . ? 1_555 ? 2 AC1 5 HOH H . ? HOH A 825 . ? 1_555 ? 3 AC1 5 VAL B 89 ? VAL B 89 . ? 4_556 ? 4 AC1 5 ARG B 90 ? ARG B 90 . ? 4_556 ? 5 AC1 5 HOH I . ? HOH B 813 . ? 4_556 ? 6 AC2 4 ARG B 168 ? ARG B 168 . ? 1_555 ? 7 AC2 4 VAL B 171 ? VAL B 171 . ? 1_555 ? 8 AC2 4 SER B 173 ? SER B 173 . ? 1_555 ? 9 AC2 4 HOH I . ? HOH B 734 . ? 1_555 ? 10 AC3 9 TYR A 62 ? TYR A 62 . ? 1_555 ? 11 AC3 9 THR A 85 ? THR A 85 . ? 1_555 ? 12 AC3 9 GLY A 87 ? GLY A 87 . ? 1_555 ? 13 AC3 9 HOH H . ? HOH A 742 . ? 1_555 ? 14 AC3 9 HOH H . ? HOH A 757 . ? 1_555 ? 15 AC3 9 HOH H . ? HOH A 782 . ? 1_555 ? 16 AC3 9 GLY B 87 ? GLY B 87 . ? 4_556 ? 17 AC3 9 ASP B 88 ? ASP B 88 . ? 4_556 ? 18 AC3 9 HOH I . ? HOH B 815 . ? 4_556 ? 19 AC4 4 GLY A 161 ? GLY A 161 . ? 1_555 ? 20 AC4 4 HIS B 19 ? HIS B 19 . ? 1_555 ? 21 AC4 4 SER B 20 ? SER B 20 . ? 1_555 ? 22 AC4 4 GLY B 21 ? GLY B 21 . ? 1_555 ? 23 AC5 9 GLY A 17 ? GLY A 17 . ? 1_555 ? 24 AC5 9 SER A 18 ? SER A 18 . ? 1_555 ? 25 AC5 9 HIS A 19 ? HIS A 19 . ? 1_555 ? 26 AC5 9 GLY A 114 ? GLY A 114 . ? 1_555 ? 27 AC5 9 GLY A 115 ? GLY A 115 . ? 1_555 ? 28 AC5 9 THR A 118 ? THR A 118 . ? 1_555 ? 29 AC5 9 HOH H . ? HOH A 709 . ? 1_555 ? 30 AC5 9 HOH H . ? HOH A 717 . ? 1_555 ? 31 AC5 9 PHE B 162 ? PHE B 162 . ? 1_555 ? # _atom_sites.entry_id 1YDH _atom_sites.fract_transf_matrix[1][1] 0.0082 _atom_sites.fract_transf_matrix[1][2] 0.0000 _atom_sites.fract_transf_matrix[1][3] 0.0019 _atom_sites.fract_transf_matrix[2][1] 0.0000 _atom_sites.fract_transf_matrix[2][2] 0.0124 _atom_sites.fract_transf_matrix[2][3] 0.0000 _atom_sites.fract_transf_matrix[3][1] 0.0000 _atom_sites.fract_transf_matrix[3][2] 0.0000 _atom_sites.fract_transf_matrix[3][3] 0.0202 _atom_sites.fract_transf_vector[1] 0.0000 _atom_sites.fract_transf_vector[2] 0.0000 _atom_sites.fract_transf_vector[3] 0.0000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 ASN 4 4 ? ? ? A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 MSE 54 54 54 MSE MSE A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 MSE 77 77 77 MSE MSE A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 MSE 95 95 95 MSE MSE A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 MSE 102 102 102 MSE MSE A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 MSE 119 119 119 MSE MSE A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 MSE 125 125 125 MSE MSE A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 TRP 128 128 128 TRP TRP A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 ASN 169 169 169 ASN ASN A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 SER 173 173 173 SER SER A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 MSE 181 181 181 MSE MSE A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 MSE 184 184 184 MSE MSE A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 PRO 189 189 ? ? ? A . n A 1 190 SER 190 190 ? ? ? A . n A 1 191 HIS 191 191 ? ? ? A . n A 1 192 MSE 192 192 ? ? ? A . n A 1 193 HIS 193 193 ? ? ? A . n A 1 194 VAL 194 194 ? ? ? A . n A 1 195 ALA 195 195 ? ? ? A . n A 1 196 SER 196 196 ? ? ? A . n A 1 197 HIS 197 197 ? ? ? A . n A 1 198 GLU 198 198 ? ? ? A . n A 1 199 SER 199 199 ? ? ? A . n A 1 200 TRP 200 200 ? ? ? A . n A 1 201 LYS 201 201 ? ? ? A . n A 1 202 VAL 202 202 ? ? ? A . n A 1 203 GLU 203 203 ? ? ? A . n A 1 204 GLU 204 204 ? ? ? A . n A 1 205 LEU 205 205 ? ? ? A . n A 1 206 GLY 206 206 ? ? ? A . n A 1 207 ASP 207 207 ? ? ? A . n A 1 208 TYR 208 208 ? ? ? A . n A 1 209 PRO 209 209 ? ? ? A . n A 1 210 GLY 210 210 ? ? ? A . n A 1 211 GLN 211 211 ? ? ? A . n A 1 212 GLU 212 212 ? ? ? A . n A 1 213 ASN 213 213 ? ? ? A . n A 1 214 LYS 214 214 ? ? ? A . n A 1 215 PRO 215 215 ? ? ? A . n A 1 216 GLN 216 216 ? ? ? A . n B 1 1 SER 1 1 ? ? ? B . n B 1 2 GLU 2 2 ? ? ? B . n B 1 3 ASP 3 3 ? ? ? B . n B 1 4 ASN 4 4 ? ? ? B . n B 1 5 GLN 5 5 ? ? ? B . n B 1 6 ARG 6 6 ? ? ? B . n B 1 7 SER 7 7 ? ? ? B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PHE 9 9 9 PHE PHE B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 ILE 12 12 12 ILE ILE B . n B 1 13 CYS 13 13 13 CYS CYS B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 PHE 15 15 15 PHE PHE B . n B 1 16 CYS 16 16 16 CYS CYS B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 HIS 19 19 19 HIS HIS B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 HIS 22 22 22 HIS HIS B . n B 1 23 ARG 23 23 23 ARG ARG B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 PHE 26 26 26 PHE PHE B . n B 1 27 SER 27 27 27 SER SER B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 GLU 32 32 32 GLU GLU B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 GLY 34 34 34 GLY GLY B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 GLU 36 36 36 GLU GLU B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 ARG 40 40 40 ARG ARG B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 ILE 42 42 42 ILE ILE B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 TYR 46 46 46 TYR TYR B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 SER 50 50 50 SER SER B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 MSE 54 54 54 MSE MSE B . n B 1 55 GLY 55 55 55 GLY GLY B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 ILE 57 57 57 ILE ILE B . n B 1 58 SER 58 58 58 SER SER B . n B 1 59 ARG 59 59 59 ARG ARG B . n B 1 60 ARG 60 60 60 ARG ARG B . n B 1 61 VAL 61 61 61 VAL VAL B . n B 1 62 TYR 62 62 62 TYR TYR B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 GLY 64 64 64 GLY GLY B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 LEU 66 66 66 LEU LEU B . n B 1 67 HIS 67 67 67 HIS HIS B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 ILE 71 71 71 ILE ILE B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 PRO 73 73 73 PRO PRO B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 MSE 77 77 77 MSE MSE B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 ILE 79 79 79 ILE ILE B . n B 1 80 GLU 80 80 80 GLU GLU B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 SER 82 82 82 SER SER B . n B 1 83 GLY 83 83 83 GLY GLY B . n B 1 84 GLU 84 84 84 GLU GLU B . n B 1 85 THR 85 85 85 THR THR B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 ASP 88 88 88 ASP ASP B . n B 1 89 VAL 89 89 89 VAL VAL B . n B 1 90 ARG 90 90 90 ARG ARG B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 ALA 93 93 93 ALA ALA B . n B 1 94 ASP 94 94 94 ASP ASP B . n B 1 95 MSE 95 95 95 MSE MSE B . n B 1 96 HIS 96 96 96 HIS HIS B . n B 1 97 GLU 97 97 97 GLU GLU B . n B 1 98 ARG 98 98 98 ARG ARG B . n B 1 99 LYS 99 99 99 LYS LYS B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 MSE 102 102 102 MSE MSE B . n B 1 103 ALA 103 103 103 ALA ALA B . n B 1 104 GLN 104 104 104 GLN GLN B . n B 1 105 GLU 105 105 105 GLU GLU B . n B 1 106 ALA 106 106 106 ALA ALA B . n B 1 107 GLU 107 107 107 GLU GLU B . n B 1 108 ALA 108 108 108 ALA ALA B . n B 1 109 PHE 109 109 109 PHE PHE B . n B 1 110 ILE 110 110 110 ILE ILE B . n B 1 111 ALA 111 111 111 ALA ALA B . n B 1 112 LEU 112 112 112 LEU LEU B . n B 1 113 PRO 113 113 113 PRO PRO B . n B 1 114 GLY 114 114 114 GLY GLY B . n B 1 115 GLY 115 115 115 GLY GLY B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 GLY 117 117 117 GLY GLY B . n B 1 118 THR 118 118 118 THR THR B . n B 1 119 MSE 119 119 119 MSE MSE B . n B 1 120 GLU 120 120 120 GLU GLU B . n B 1 121 GLU 121 121 121 GLU GLU B . n B 1 122 LEU 122 122 122 LEU LEU B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 GLU 124 124 124 GLU GLU B . n B 1 125 MSE 125 125 125 MSE MSE B . n B 1 126 ILE 126 126 126 ILE ILE B . n B 1 127 THR 127 127 127 THR THR B . n B 1 128 TRP 128 128 128 TRP TRP B . n B 1 129 SER 129 129 129 SER SER B . n B 1 130 GLN 130 130 130 GLN GLN B . n B 1 131 LEU 131 131 131 LEU LEU B . n B 1 132 GLY 132 132 132 GLY GLY B . n B 1 133 ILE 133 133 133 ILE ILE B . n B 1 134 HIS 134 134 134 HIS HIS B . n B 1 135 LYS 135 135 135 LYS LYS B . n B 1 136 LYS 136 136 136 LYS LYS B . n B 1 137 THR 137 137 137 THR THR B . n B 1 138 VAL 138 138 138 VAL VAL B . n B 1 139 GLY 139 139 139 GLY GLY B . n B 1 140 LEU 140 140 140 LEU LEU B . n B 1 141 LEU 141 141 141 LEU LEU B . n B 1 142 ASN 142 142 142 ASN ASN B . n B 1 143 VAL 143 143 143 VAL VAL B . n B 1 144 ASP 144 144 144 ASP ASP B . n B 1 145 GLY 145 145 145 GLY GLY B . n B 1 146 TYR 146 146 146 TYR TYR B . n B 1 147 TYR 147 147 147 TYR TYR B . n B 1 148 ASN 148 148 148 ASN ASN B . n B 1 149 ASN 149 149 149 ASN ASN B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 LEU 151 151 151 LEU LEU B . n B 1 152 ALA 152 152 152 ALA ALA B . n B 1 153 LEU 153 153 153 LEU LEU B . n B 1 154 PHE 154 154 154 PHE PHE B . n B 1 155 ASP 155 155 155 ASP ASP B . n B 1 156 THR 156 156 156 THR THR B . n B 1 157 GLY 157 157 157 GLY GLY B . n B 1 158 VAL 158 158 158 VAL VAL B . n B 1 159 GLU 159 159 159 GLU GLU B . n B 1 160 GLU 160 160 160 GLU GLU B . n B 1 161 GLY 161 161 161 GLY GLY B . n B 1 162 PHE 162 162 162 PHE PHE B . n B 1 163 ILE 163 163 163 ILE ILE B . n B 1 164 LYS 164 164 164 LYS LYS B . n B 1 165 PRO 165 165 165 PRO PRO B . n B 1 166 GLY 166 166 166 GLY GLY B . n B 1 167 ALA 167 167 167 ALA ALA B . n B 1 168 ARG 168 168 168 ARG ARG B . n B 1 169 ASN 169 169 169 ASN ASN B . n B 1 170 ILE 170 170 170 ILE ILE B . n B 1 171 VAL 171 171 171 VAL VAL B . n B 1 172 VAL 172 172 172 VAL VAL B . n B 1 173 SER 173 173 173 SER SER B . n B 1 174 ALA 174 174 174 ALA ALA B . n B 1 175 PRO 175 175 175 PRO PRO B . n B 1 176 THR 176 176 176 THR THR B . n B 1 177 ALA 177 177 177 ALA ALA B . n B 1 178 LYS 178 178 178 LYS LYS B . n B 1 179 GLU 179 179 179 GLU GLU B . n B 1 180 LEU 180 180 180 LEU LEU B . n B 1 181 MSE 181 181 181 MSE MSE B . n B 1 182 GLU 182 182 182 GLU GLU B . n B 1 183 LYS 183 183 183 LYS LYS B . n B 1 184 MSE 184 184 184 MSE MSE B . n B 1 185 GLU 185 185 185 GLU GLU B . n B 1 186 GLU 186 186 186 GLU GLU B . n B 1 187 TYR 187 187 187 TYR TYR B . n B 1 188 THR 188 188 188 THR THR B . n B 1 189 PRO 189 189 ? ? ? B . n B 1 190 SER 190 190 ? ? ? B . n B 1 191 HIS 191 191 ? ? ? B . n B 1 192 MSE 192 192 ? ? ? B . n B 1 193 HIS 193 193 ? ? ? B . n B 1 194 VAL 194 194 ? ? ? B . n B 1 195 ALA 195 195 ? ? ? B . n B 1 196 SER 196 196 ? ? ? B . n B 1 197 HIS 197 197 ? ? ? B . n B 1 198 GLU 198 198 ? ? ? B . n B 1 199 SER 199 199 ? ? ? B . n B 1 200 TRP 200 200 ? ? ? B . n B 1 201 LYS 201 201 ? ? ? B . n B 1 202 VAL 202 202 ? ? ? B . n B 1 203 GLU 203 203 ? ? ? B . n B 1 204 GLU 204 204 ? ? ? B . n B 1 205 LEU 205 205 ? ? ? B . n B 1 206 GLY 206 206 ? ? ? B . n B 1 207 ASP 207 207 ? ? ? B . n B 1 208 TYR 208 208 ? ? ? B . n B 1 209 PRO 209 209 ? ? ? B . n B 1 210 GLY 210 210 ? ? ? B . n B 1 211 GLN 211 211 ? ? ? B . n B 1 212 GLU 212 212 ? ? ? B . n B 1 213 ASN 213 213 ? ? ? B . n B 1 214 LYS 214 214 ? ? ? B . n B 1 215 PRO 215 215 ? ? ? B . n B 1 216 GLN 216 216 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Center for Eukaryotic Structural Genomics' _pdbx_SG_project.initial_of_center CESG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NO3 1 600 600 NO3 NO3 A . D 3 EDO 1 701 701 EDO EDO A . E 3 EDO 1 703 703 EDO EDO A . F 3 EDO 1 700 700 EDO EDO B . G 3 EDO 1 702 702 EDO EDO B . H 4 HOH 1 704 7 HOH HOH A . H 4 HOH 2 705 8 HOH HOH A . H 4 HOH 3 706 9 HOH HOH A . H 4 HOH 4 707 12 HOH HOH A . H 4 HOH 5 708 14 HOH HOH A . H 4 HOH 6 709 15 HOH HOH A . H 4 HOH 7 710 16 HOH HOH A . H 4 HOH 8 711 17 HOH HOH A . H 4 HOH 9 712 18 HOH HOH A . H 4 HOH 10 713 19 HOH HOH A . H 4 HOH 11 714 22 HOH HOH A . H 4 HOH 12 715 23 HOH HOH A . H 4 HOH 13 716 24 HOH HOH A . H 4 HOH 14 717 25 HOH HOH A . H 4 HOH 15 718 26 HOH HOH A . H 4 HOH 16 719 28 HOH HOH A . H 4 HOH 17 720 30 HOH HOH A . H 4 HOH 18 721 35 HOH HOH A . H 4 HOH 19 722 41 HOH HOH A . H 4 HOH 20 723 43 HOH HOH A . H 4 HOH 21 724 44 HOH HOH A . H 4 HOH 22 725 49 HOH HOH A . H 4 HOH 23 726 53 HOH HOH A . H 4 HOH 24 727 54 HOH HOH A . H 4 HOH 25 728 55 HOH HOH A . H 4 HOH 26 729 56 HOH HOH A . H 4 HOH 27 730 58 HOH HOH A . H 4 HOH 28 731 59 HOH HOH A . H 4 HOH 29 732 66 HOH HOH A . H 4 HOH 30 733 69 HOH HOH A . H 4 HOH 31 734 71 HOH HOH A . H 4 HOH 32 735 72 HOH HOH A . H 4 HOH 33 736 74 HOH HOH A . H 4 HOH 34 737 75 HOH HOH A . H 4 HOH 35 738 77 HOH HOH A . H 4 HOH 36 739 78 HOH HOH A . H 4 HOH 37 740 79 HOH HOH A . H 4 HOH 38 741 81 HOH HOH A . H 4 HOH 39 742 82 HOH HOH A . H 4 HOH 40 743 84 HOH HOH A . H 4 HOH 41 744 85 HOH HOH A . H 4 HOH 42 745 86 HOH HOH A . H 4 HOH 43 746 87 HOH HOH A . H 4 HOH 44 747 89 HOH HOH A . H 4 HOH 45 748 94 HOH HOH A . H 4 HOH 46 749 95 HOH HOH A . H 4 HOH 47 750 97 HOH HOH A . H 4 HOH 48 751 98 HOH HOH A . H 4 HOH 49 752 101 HOH HOH A . H 4 HOH 50 753 103 HOH HOH A . H 4 HOH 51 754 104 HOH HOH A . H 4 HOH 52 755 106 HOH HOH A . H 4 HOH 53 756 115 HOH HOH A . H 4 HOH 54 757 116 HOH HOH A . H 4 HOH 55 758 117 HOH HOH A . H 4 HOH 56 759 119 HOH HOH A . H 4 HOH 57 760 121 HOH HOH A . H 4 HOH 58 761 123 HOH HOH A . H 4 HOH 59 762 127 HOH HOH A . H 4 HOH 60 763 128 HOH HOH A . H 4 HOH 61 764 129 HOH HOH A . H 4 HOH 62 765 131 HOH HOH A . H 4 HOH 63 766 132 HOH HOH A . H 4 HOH 64 767 136 HOH HOH A . H 4 HOH 65 768 142 HOH HOH A . H 4 HOH 66 769 144 HOH HOH A . H 4 HOH 67 770 145 HOH HOH A . H 4 HOH 68 771 148 HOH HOH A . H 4 HOH 69 772 156 HOH HOH A . H 4 HOH 70 773 158 HOH HOH A . H 4 HOH 71 774 161 HOH HOH A . H 4 HOH 72 775 162 HOH HOH A . H 4 HOH 73 776 163 HOH HOH A . H 4 HOH 74 777 164 HOH HOH A . H 4 HOH 75 778 167 HOH HOH A . H 4 HOH 76 779 168 HOH HOH A . H 4 HOH 77 780 171 HOH HOH A . H 4 HOH 78 781 172 HOH HOH A . H 4 HOH 79 782 173 HOH HOH A . H 4 HOH 80 783 178 HOH HOH A . H 4 HOH 81 784 179 HOH HOH A . H 4 HOH 82 785 180 HOH HOH A . H 4 HOH 83 786 181 HOH HOH A . H 4 HOH 84 787 184 HOH HOH A . H 4 HOH 85 788 187 HOH HOH A . H 4 HOH 86 789 190 HOH HOH A . H 4 HOH 87 790 191 HOH HOH A . H 4 HOH 88 791 194 HOH HOH A . H 4 HOH 89 792 195 HOH HOH A . H 4 HOH 90 793 196 HOH HOH A . H 4 HOH 91 794 197 HOH HOH A . H 4 HOH 92 795 198 HOH HOH A . H 4 HOH 93 796 200 HOH HOH A . H 4 HOH 94 797 203 HOH HOH A . H 4 HOH 95 798 205 HOH HOH A . H 4 HOH 96 799 207 HOH HOH A . H 4 HOH 97 800 209 HOH HOH A . H 4 HOH 98 801 213 HOH HOH A . H 4 HOH 99 802 214 HOH HOH A . H 4 HOH 100 803 223 HOH HOH A . H 4 HOH 101 804 227 HOH HOH A . H 4 HOH 102 805 231 HOH HOH A . H 4 HOH 103 806 234 HOH HOH A . H 4 HOH 104 807 238 HOH HOH A . H 4 HOH 105 808 239 HOH HOH A . H 4 HOH 106 809 241 HOH HOH A . H 4 HOH 107 810 243 HOH HOH A . H 4 HOH 108 811 244 HOH HOH A . H 4 HOH 109 812 246 HOH HOH A . H 4 HOH 110 813 249 HOH HOH A . H 4 HOH 111 814 250 HOH HOH A . H 4 HOH 112 815 251 HOH HOH A . H 4 HOH 113 816 254 HOH HOH A . H 4 HOH 114 817 256 HOH HOH A . H 4 HOH 115 818 258 HOH HOH A . H 4 HOH 116 819 262 HOH HOH A . H 4 HOH 117 820 263 HOH HOH A . H 4 HOH 118 821 264 HOH HOH A . H 4 HOH 119 822 265 HOH HOH A . H 4 HOH 120 823 266 HOH HOH A . H 4 HOH 121 824 267 HOH HOH A . H 4 HOH 122 825 268 HOH HOH A . H 4 HOH 123 826 269 HOH HOH A . H 4 HOH 124 827 272 HOH HOH A . H 4 HOH 125 828 273 HOH HOH A . H 4 HOH 126 829 275 HOH HOH A . H 4 HOH 127 830 277 HOH HOH A . H 4 HOH 128 831 278 HOH HOH A . H 4 HOH 129 832 279 HOH HOH A . H 4 HOH 130 833 285 HOH HOH A . H 4 HOH 131 834 286 HOH HOH A . H 4 HOH 132 835 287 HOH HOH A . H 4 HOH 133 836 290 HOH HOH A . H 4 HOH 134 837 301 HOH HOH A . H 4 HOH 135 838 303 HOH HOH A . H 4 HOH 136 839 307 HOH HOH A . H 4 HOH 137 840 309 HOH HOH A . H 4 HOH 138 841 313 HOH HOH A . H 4 HOH 139 842 314 HOH HOH A . H 4 HOH 140 843 319 HOH HOH A . H 4 HOH 141 844 321 HOH HOH A . H 4 HOH 142 845 322 HOH HOH A . H 4 HOH 143 846 323 HOH HOH A . H 4 HOH 144 847 324 HOH HOH A . H 4 HOH 145 848 326 HOH HOH A . H 4 HOH 146 849 328 HOH HOH A . H 4 HOH 147 850 332 HOH HOH A . H 4 HOH 148 851 335 HOH HOH A . H 4 HOH 149 852 340 HOH HOH A . H 4 HOH 150 853 360 HOH HOH A . H 4 HOH 151 854 378 HOH HOH A . H 4 HOH 152 855 380 HOH HOH A . H 4 HOH 153 856 381 HOH HOH A . H 4 HOH 154 857 382 HOH HOH A . H 4 HOH 155 858 388 HOH HOH A . I 4 HOH 1 703 1 HOH HOH B . I 4 HOH 2 704 2 HOH HOH B . I 4 HOH 3 705 3 HOH HOH B . I 4 HOH 4 706 4 HOH HOH B . I 4 HOH 5 707 5 HOH HOH B . I 4 HOH 6 708 10 HOH HOH B . I 4 HOH 7 709 11 HOH HOH B . I 4 HOH 8 710 27 HOH HOH B . I 4 HOH 9 711 29 HOH HOH B . I 4 HOH 10 712 32 HOH HOH B . I 4 HOH 11 713 33 HOH HOH B . I 4 HOH 12 714 34 HOH HOH B . I 4 HOH 13 715 36 HOH HOH B . I 4 HOH 14 716 37 HOH HOH B . I 4 HOH 15 717 38 HOH HOH B . I 4 HOH 16 718 39 HOH HOH B . I 4 HOH 17 719 40 HOH HOH B . I 4 HOH 18 720 42 HOH HOH B . I 4 HOH 19 721 46 HOH HOH B . I 4 HOH 20 722 47 HOH HOH B . I 4 HOH 21 723 48 HOH HOH B . I 4 HOH 22 724 50 HOH HOH B . I 4 HOH 23 725 51 HOH HOH B . I 4 HOH 24 726 52 HOH HOH B . I 4 HOH 25 727 57 HOH HOH B . I 4 HOH 26 728 61 HOH HOH B . I 4 HOH 27 729 62 HOH HOH B . I 4 HOH 28 730 64 HOH HOH B . I 4 HOH 29 731 65 HOH HOH B . I 4 HOH 30 732 68 HOH HOH B . I 4 HOH 31 733 73 HOH HOH B . I 4 HOH 32 734 80 HOH HOH B . I 4 HOH 33 735 83 HOH HOH B . I 4 HOH 34 736 90 HOH HOH B . I 4 HOH 35 737 91 HOH HOH B . I 4 HOH 36 738 92 HOH HOH B . I 4 HOH 37 739 93 HOH HOH B . I 4 HOH 38 740 96 HOH HOH B . I 4 HOH 39 741 99 HOH HOH B . I 4 HOH 40 742 102 HOH HOH B . I 4 HOH 41 743 105 HOH HOH B . I 4 HOH 42 744 107 HOH HOH B . I 4 HOH 43 745 108 HOH HOH B . I 4 HOH 44 746 109 HOH HOH B . I 4 HOH 45 747 110 HOH HOH B . I 4 HOH 46 748 111 HOH HOH B . I 4 HOH 47 749 112 HOH HOH B . I 4 HOH 48 750 113 HOH HOH B . I 4 HOH 49 751 114 HOH HOH B . I 4 HOH 50 752 118 HOH HOH B . I 4 HOH 51 753 120 HOH HOH B . I 4 HOH 52 754 122 HOH HOH B . I 4 HOH 53 755 125 HOH HOH B . I 4 HOH 54 756 126 HOH HOH B . I 4 HOH 55 757 130 HOH HOH B . I 4 HOH 56 758 133 HOH HOH B . I 4 HOH 57 759 134 HOH HOH B . I 4 HOH 58 760 135 HOH HOH B . I 4 HOH 59 761 137 HOH HOH B . I 4 HOH 60 762 138 HOH HOH B . I 4 HOH 61 763 139 HOH HOH B . I 4 HOH 62 764 141 HOH HOH B . I 4 HOH 63 765 146 HOH HOH B . I 4 HOH 64 766 147 HOH HOH B . I 4 HOH 65 767 149 HOH HOH B . I 4 HOH 66 768 150 HOH HOH B . I 4 HOH 67 769 151 HOH HOH B . I 4 HOH 68 770 152 HOH HOH B . I 4 HOH 69 771 153 HOH HOH B . I 4 HOH 70 772 154 HOH HOH B . I 4 HOH 71 773 157 HOH HOH B . I 4 HOH 72 774 159 HOH HOH B . I 4 HOH 73 775 165 HOH HOH B . I 4 HOH 74 776 166 HOH HOH B . I 4 HOH 75 777 169 HOH HOH B . I 4 HOH 76 778 170 HOH HOH B . I 4 HOH 77 779 174 HOH HOH B . I 4 HOH 78 780 176 HOH HOH B . I 4 HOH 79 781 177 HOH HOH B . I 4 HOH 80 782 182 HOH HOH B . I 4 HOH 81 783 183 HOH HOH B . I 4 HOH 82 784 185 HOH HOH B . I 4 HOH 83 785 188 HOH HOH B . I 4 HOH 84 786 189 HOH HOH B . I 4 HOH 85 787 199 HOH HOH B . I 4 HOH 86 788 201 HOH HOH B . I 4 HOH 87 789 204 HOH HOH B . I 4 HOH 88 790 206 HOH HOH B . I 4 HOH 89 791 210 HOH HOH B . I 4 HOH 90 792 212 HOH HOH B . I 4 HOH 91 793 215 HOH HOH B . I 4 HOH 92 794 216 HOH HOH B . I 4 HOH 93 795 217 HOH HOH B . I 4 HOH 94 796 218 HOH HOH B . I 4 HOH 95 797 219 HOH HOH B . I 4 HOH 96 798 220 HOH HOH B . I 4 HOH 97 799 222 HOH HOH B . I 4 HOH 98 800 224 HOH HOH B . I 4 HOH 99 801 225 HOH HOH B . I 4 HOH 100 802 228 HOH HOH B . I 4 HOH 101 803 229 HOH HOH B . I 4 HOH 102 804 232 HOH HOH B . I 4 HOH 103 805 233 HOH HOH B . I 4 HOH 104 806 235 HOH HOH B . I 4 HOH 105 807 236 HOH HOH B . I 4 HOH 106 808 242 HOH HOH B . I 4 HOH 107 809 245 HOH HOH B . I 4 HOH 108 810 247 HOH HOH B . I 4 HOH 109 811 248 HOH HOH B . I 4 HOH 110 812 252 HOH HOH B . I 4 HOH 111 813 253 HOH HOH B . I 4 HOH 112 814 257 HOH HOH B . I 4 HOH 113 815 259 HOH HOH B . I 4 HOH 114 816 261 HOH HOH B . I 4 HOH 115 817 270 HOH HOH B . I 4 HOH 116 818 274 HOH HOH B . I 4 HOH 117 819 276 HOH HOH B . I 4 HOH 118 820 281 HOH HOH B . I 4 HOH 119 821 282 HOH HOH B . I 4 HOH 120 822 283 HOH HOH B . I 4 HOH 121 823 284 HOH HOH B . I 4 HOH 122 824 288 HOH HOH B . I 4 HOH 123 825 289 HOH HOH B . I 4 HOH 124 826 292 HOH HOH B . I 4 HOH 125 827 293 HOH HOH B . I 4 HOH 126 828 295 HOH HOH B . I 4 HOH 127 829 296 HOH HOH B . I 4 HOH 128 830 297 HOH HOH B . I 4 HOH 129 831 298 HOH HOH B . I 4 HOH 130 832 299 HOH HOH B . I 4 HOH 131 833 300 HOH HOH B . I 4 HOH 132 834 304 HOH HOH B . I 4 HOH 133 835 305 HOH HOH B . I 4 HOH 134 836 308 HOH HOH B . I 4 HOH 135 837 310 HOH HOH B . I 4 HOH 136 838 311 HOH HOH B . I 4 HOH 137 839 317 HOH HOH B . I 4 HOH 138 840 320 HOH HOH B . I 4 HOH 139 841 325 HOH HOH B . I 4 HOH 140 842 327 HOH HOH B . I 4 HOH 141 843 330 HOH HOH B . I 4 HOH 142 844 337 HOH HOH B . I 4 HOH 143 845 339 HOH HOH B . I 4 HOH 144 846 342 HOH HOH B . I 4 HOH 145 847 343 HOH HOH B . I 4 HOH 146 848 344 HOH HOH B . I 4 HOH 147 849 349 HOH HOH B . I 4 HOH 148 850 359 HOH HOH B . I 4 HOH 149 851 364 HOH HOH B . I 4 HOH 150 852 367 HOH HOH B . I 4 HOH 151 853 369 HOH HOH B . I 4 HOH 152 854 370 HOH HOH B . I 4 HOH 153 855 373 HOH HOH B . I 4 HOH 154 856 374 HOH HOH B . I 4 HOH 155 857 377 HOH HOH B . I 4 HOH 156 858 383 HOH HOH B . I 4 HOH 157 859 384 HOH HOH B . I 4 HOH 158 860 386 HOH HOH B . I 4 HOH 159 861 387 HOH HOH B . I 4 HOH 160 862 389 HOH HOH B . I 4 HOH 161 863 390 HOH HOH B . I 4 HOH 162 864 391 HOH HOH B . I 4 HOH 163 865 392 HOH HOH B . I 4 HOH 164 866 393 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 54 A MSE 54 ? MET SELENOMETHIONINE 2 A MSE 77 A MSE 77 ? MET SELENOMETHIONINE 3 A MSE 95 A MSE 95 ? MET SELENOMETHIONINE 4 A MSE 102 A MSE 102 ? MET SELENOMETHIONINE 5 A MSE 119 A MSE 119 ? MET SELENOMETHIONINE 6 A MSE 125 A MSE 125 ? MET SELENOMETHIONINE 7 A MSE 181 A MSE 181 ? MET SELENOMETHIONINE 8 A MSE 184 A MSE 184 ? MET SELENOMETHIONINE 9 B MSE 54 B MSE 54 ? MET SELENOMETHIONINE 10 B MSE 77 B MSE 77 ? MET SELENOMETHIONINE 11 B MSE 95 B MSE 95 ? MET SELENOMETHIONINE 12 B MSE 102 B MSE 102 ? MET SELENOMETHIONINE 13 B MSE 119 B MSE 119 ? MET SELENOMETHIONINE 14 B MSE 125 B MSE 125 ? MET SELENOMETHIONINE 15 B MSE 181 B MSE 181 ? MET SELENOMETHIONINE 16 B MSE 184 B MSE 184 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4850 ? 1 MORE -21 ? 1 'SSA (A^2)' 14440 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 850 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-01-11 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.Cartn_x _pdbx_phasing_MAD_set_site.Cartn_y _pdbx_phasing_MAD_set_site.Cartn_z _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.b_iso 1 SE 20.086 0.054 5.010 0.62 27.8 2 SE 90.255 21.268 12.549 0.59 24.8 3 SE 15.680 1.684 20.177 0.71 34.1 4 SE 61.380 39.957 13.454 0.67 53.3 5 SE 24.608 3.559 19.156 0.65 36.8 6 SE 83.776 26.253 19.511 0.50 23.0 7 SE 92.108 28.058 16.003 0.53 32.8 8 SE 64.360 36.189 12.147 0.62 32.2 9 SE 15.635 8.523 16.537 0.66 43.3 10 SE 81.094 29.784 4.881 0.45 19.2 11 SE 99.196 33.716 3.067 0.88 55.4 12 SE 92.511 36.154 14.191 0.48 32.5 13 SE 75.880 33.897 18.398 0.48 28.2 14 SE 102.073 30.487 2.860 0.66 46.5 15 SE 90.225 17.148 24.296 0.38 30.3 16 SE 89.742 12.521 22.627 0.55 50.7 # loop_ _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom 30.000 8.19 1020 0.39 8.19 5.20 1738 0.36 5.20 4.07 2232 0.32 4.07 3.46 2614 0.31 3.46 3.06 2866 0.30 3.06 2.77 3003 0.25 2.77 2.55 3205 0.20 2.55 2.37 3299 0.16 # _pdbx_phasing_dm.entry_id 1YDH _pdbx_phasing_dm.fom_acentric 0.66 _pdbx_phasing_dm.fom_centric 0.67 _pdbx_phasing_dm.fom 0.66 _pdbx_phasing_dm.reflns_acentric 19237 _pdbx_phasing_dm.reflns_centric 740 _pdbx_phasing_dm.reflns 19977 # loop_ _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 29.694 6.6 0.92 0.84 0.92 835 104 939 6.6 4.1 0.90 0.75 0.90 2671 158 2829 4.1 3.3 0.86 0.77 0.85 3412 151 3563 3.3 2.9 0.72 0.64 0.72 3329 109 3438 2.9 2.5 0.53 0.55 0.53 5639 144 5783 2.5 2.3 0.34 0.29 0.34 3351 74 3425 # _phasing.method SAD # _phasing_MAD.entry_id 1YDH _phasing_MAD.pdbx_d_res_high 2.300 _phasing_MAD.pdbx_d_res_low 30.000 _phasing_MAD.pdbx_reflns 19977 _phasing_MAD.pdbx_fom 0.27 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLVE 2.06 28-Dec-2003 program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 RESOLVE 2.06 02-Jan-2004 program 'Terwilliger, T. C' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 REFMAC refmac_5.2.0005 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 855 ? ? O B HOH 857 ? ? 1.96 2 1 O A HOH 759 ? ? O A HOH 834 ? ? 2.15 3 1 O B HOH 731 ? ? O B HOH 845 ? ? 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 77 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 77 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.557 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.393 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 115.93 120.30 -4.37 0.50 N 2 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH2 A ARG 8 ? ? 124.53 120.30 4.23 0.50 N 3 1 CA A LEU 66 ? ? CB A LEU 66 ? ? CG A LEU 66 ? ? 99.58 115.30 -15.72 2.30 N 4 1 NE B ARG 60 ? ? CZ B ARG 60 ? ? NH1 B ARG 60 ? ? 113.88 120.30 -6.42 0.50 N 5 1 NE B ARG 60 ? ? CZ B ARG 60 ? ? NH2 B ARG 60 ? ? 124.27 120.30 3.97 0.50 N 6 1 NE B ARG 98 ? ? CZ B ARG 98 ? ? NH1 B ARG 98 ? ? 116.62 120.30 -3.68 0.50 N 7 1 CA B LEU 140 ? ? CB B LEU 140 ? ? CG B LEU 140 ? ? 142.43 115.30 27.13 2.30 N 8 1 CB B LEU 140 ? ? CG B LEU 140 ? ? CD1 B LEU 140 ? ? 89.03 111.00 -21.97 1.70 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A ASN 4 ? A ASN 4 5 1 Y 1 A PRO 189 ? A PRO 189 6 1 Y 1 A SER 190 ? A SER 190 7 1 Y 1 A HIS 191 ? A HIS 191 8 1 Y 1 A MSE 192 ? A MSE 192 9 1 Y 1 A HIS 193 ? A HIS 193 10 1 Y 1 A VAL 194 ? A VAL 194 11 1 Y 1 A ALA 195 ? A ALA 195 12 1 Y 1 A SER 196 ? A SER 196 13 1 Y 1 A HIS 197 ? A HIS 197 14 1 Y 1 A GLU 198 ? A GLU 198 15 1 Y 1 A SER 199 ? A SER 199 16 1 Y 1 A TRP 200 ? A TRP 200 17 1 Y 1 A LYS 201 ? A LYS 201 18 1 Y 1 A VAL 202 ? A VAL 202 19 1 Y 1 A GLU 203 ? A GLU 203 20 1 Y 1 A GLU 204 ? A GLU 204 21 1 Y 1 A LEU 205 ? A LEU 205 22 1 Y 1 A GLY 206 ? A GLY 206 23 1 Y 1 A ASP 207 ? A ASP 207 24 1 Y 1 A TYR 208 ? A TYR 208 25 1 Y 1 A PRO 209 ? A PRO 209 26 1 Y 1 A GLY 210 ? A GLY 210 27 1 Y 1 A GLN 211 ? A GLN 211 28 1 Y 1 A GLU 212 ? A GLU 212 29 1 Y 1 A ASN 213 ? A ASN 213 30 1 Y 1 A LYS 214 ? A LYS 214 31 1 Y 1 A PRO 215 ? A PRO 215 32 1 Y 1 A GLN 216 ? A GLN 216 33 1 Y 1 B SER 1 ? B SER 1 34 1 Y 1 B GLU 2 ? B GLU 2 35 1 Y 1 B ASP 3 ? B ASP 3 36 1 Y 1 B ASN 4 ? B ASN 4 37 1 Y 1 B GLN 5 ? B GLN 5 38 1 Y 1 B ARG 6 ? B ARG 6 39 1 Y 1 B SER 7 ? B SER 7 40 1 Y 1 B PRO 189 ? B PRO 189 41 1 Y 1 B SER 190 ? B SER 190 42 1 Y 1 B HIS 191 ? B HIS 191 43 1 Y 1 B MSE 192 ? B MSE 192 44 1 Y 1 B HIS 193 ? B HIS 193 45 1 Y 1 B VAL 194 ? B VAL 194 46 1 Y 1 B ALA 195 ? B ALA 195 47 1 Y 1 B SER 196 ? B SER 196 48 1 Y 1 B HIS 197 ? B HIS 197 49 1 Y 1 B GLU 198 ? B GLU 198 50 1 Y 1 B SER 199 ? B SER 199 51 1 Y 1 B TRP 200 ? B TRP 200 52 1 Y 1 B LYS 201 ? B LYS 201 53 1 Y 1 B VAL 202 ? B VAL 202 54 1 Y 1 B GLU 203 ? B GLU 203 55 1 Y 1 B GLU 204 ? B GLU 204 56 1 Y 1 B LEU 205 ? B LEU 205 57 1 Y 1 B GLY 206 ? B GLY 206 58 1 Y 1 B ASP 207 ? B ASP 207 59 1 Y 1 B TYR 208 ? B TYR 208 60 1 Y 1 B PRO 209 ? B PRO 209 61 1 Y 1 B GLY 210 ? B GLY 210 62 1 Y 1 B GLN 211 ? B GLN 211 63 1 Y 1 B GLU 212 ? B GLU 212 64 1 Y 1 B ASN 213 ? B ASN 213 65 1 Y 1 B LYS 214 ? B LYS 214 66 1 Y 1 B PRO 215 ? B PRO 215 67 1 Y 1 B GLN 216 ? B GLN 216 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NITRATE ION' NO3 3 1,2-ETHANEDIOL EDO 4 water HOH #