data_1YDM # _entry.id 1YDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YDM RCSB RCSB031408 WWPDB D_1000031408 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1SOU . unspecified TargetDB SR44 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YDM _pdbx_database_status.recvd_initial_deposition_date 2004-12-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuzin, A.P.' 1 'Jianwei, S.' 2 'Vorobiev, S.' 3 'Acton, T.' 4 'Xia, R.' 5 'Ma, L.-C.' 6 'Montelione, G.' 7 'Tong, L.' 8 'Hunt, J.F.' 9 'Northeast Structural Genomics Consortium (NESG)' 10 # _citation.id primary _citation.title 'X-Ray structure of Northeast Structural Genomics target SR44' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kuzin, A.P.' 1 primary 'Jianwei, S.' 2 primary 'Vorobiev, S.' 3 primary 'Acton, T.' 4 primary 'Xia, R.' 5 primary 'Ma, L.-C.' 6 primary 'Montelione, G.' 7 primary 'Tong, L.' 8 primary 'Hunt, J.F.' 9 # _cell.entry_id 1YDM _cell.length_a 85.302 _cell.length_b 44.276 _cell.length_c 85.296 _cell.angle_alpha 90.00 _cell.angle_beta 104.99 _cell.angle_gamma 90.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YDM _symmetry.space_group_name_H-M 'P 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein yqgN' 21580.375 3 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 water nat water 18.015 57 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MKSQLRKKTLEALSALSNEDILQKTER(MSE)YKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCH PDTKK(MSE)QFRTYQTDDQLETVYAGLLEPVIEKTKEVNPSQIDL(MSE)IVPGVCFDVNGFRVGFGGGYYDRYLSEYE GKTVSLLLECQLFAHVPRLPHDIPVHKLITEDRIISCFS ; _entity_poly.pdbx_seq_one_letter_code_can ;MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHPDTK KMQFRTYQTDDQLETVYAGLLEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGKTVSLLLECQL FAHVPRLPHDIPVHKLITEDRIISCFS ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier SR44 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 SER n 1 4 GLN n 1 5 LEU n 1 6 ARG n 1 7 LYS n 1 8 LYS n 1 9 THR n 1 10 LEU n 1 11 GLU n 1 12 ALA n 1 13 LEU n 1 14 SER n 1 15 ALA n 1 16 LEU n 1 17 SER n 1 18 ASN n 1 19 GLU n 1 20 ASP n 1 21 ILE n 1 22 LEU n 1 23 GLN n 1 24 LYS n 1 25 THR n 1 26 GLU n 1 27 ARG n 1 28 MSE n 1 29 TYR n 1 30 LYS n 1 31 TYR n 1 32 LEU n 1 33 PHE n 1 34 SER n 1 35 LEU n 1 36 PRO n 1 37 GLU n 1 38 TRP n 1 39 GLN n 1 40 ASN n 1 41 ALA n 1 42 GLY n 1 43 THR n 1 44 ILE n 1 45 ALA n 1 46 VAL n 1 47 THR n 1 48 ILE n 1 49 SER n 1 50 ARG n 1 51 GLY n 1 52 LEU n 1 53 GLU n 1 54 ILE n 1 55 PRO n 1 56 THR n 1 57 ARG n 1 58 PRO n 1 59 VAL n 1 60 ILE n 1 61 GLU n 1 62 GLN n 1 63 ALA n 1 64 TRP n 1 65 GLU n 1 66 GLU n 1 67 GLY n 1 68 LYS n 1 69 GLN n 1 70 VAL n 1 71 CYS n 1 72 ILE n 1 73 PRO n 1 74 LYS n 1 75 CYS n 1 76 HIS n 1 77 PRO n 1 78 ASP n 1 79 THR n 1 80 LYS n 1 81 LYS n 1 82 MSE n 1 83 GLN n 1 84 PHE n 1 85 ARG n 1 86 THR n 1 87 TYR n 1 88 GLN n 1 89 THR n 1 90 ASP n 1 91 ASP n 1 92 GLN n 1 93 LEU n 1 94 GLU n 1 95 THR n 1 96 VAL n 1 97 TYR n 1 98 ALA n 1 99 GLY n 1 100 LEU n 1 101 LEU n 1 102 GLU n 1 103 PRO n 1 104 VAL n 1 105 ILE n 1 106 GLU n 1 107 LYS n 1 108 THR n 1 109 LYS n 1 110 GLU n 1 111 VAL n 1 112 ASN n 1 113 PRO n 1 114 SER n 1 115 GLN n 1 116 ILE n 1 117 ASP n 1 118 LEU n 1 119 MSE n 1 120 ILE n 1 121 VAL n 1 122 PRO n 1 123 GLY n 1 124 VAL n 1 125 CYS n 1 126 PHE n 1 127 ASP n 1 128 VAL n 1 129 ASN n 1 130 GLY n 1 131 PHE n 1 132 ARG n 1 133 VAL n 1 134 GLY n 1 135 PHE n 1 136 GLY n 1 137 GLY n 1 138 GLY n 1 139 TYR n 1 140 TYR n 1 141 ASP n 1 142 ARG n 1 143 TYR n 1 144 LEU n 1 145 SER n 1 146 GLU n 1 147 TYR n 1 148 GLU n 1 149 GLY n 1 150 LYS n 1 151 THR n 1 152 VAL n 1 153 SER n 1 154 LEU n 1 155 LEU n 1 156 LEU n 1 157 GLU n 1 158 CYS n 1 159 GLN n 1 160 LEU n 1 161 PHE n 1 162 ALA n 1 163 HIS n 1 164 VAL n 1 165 PRO n 1 166 ARG n 1 167 LEU n 1 168 PRO n 1 169 HIS n 1 170 ASP n 1 171 ILE n 1 172 PRO n 1 173 VAL n 1 174 HIS n 1 175 LYS n 1 176 LEU n 1 177 ILE n 1 178 THR n 1 179 GLU n 1 180 ASP n 1 181 ARG n 1 182 ILE n 1 183 ILE n 1 184 SER n 1 185 CYS n 1 186 PHE n 1 187 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene yqgN _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET21 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YQGN_BACSU _struct_ref.pdbx_db_accession P54491 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHPDTK KMQFRTYQTDDQLETVYAGLLEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGKTVSLLLECQL FAHVPRLPHDIPVHKLITEDRIISCFS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YDM A 1 ? 187 ? P54491 1 ? 187 ? 1 187 2 1 1YDM B 1 ? 187 ? P54491 1 ? 187 ? 1 187 3 1 1YDM C 1 ? 187 ? P54491 1 ? 187 ? 1 187 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YDM MSE A 28 ? UNP P54491 MET 28 'MODIFIED RESIDUE' 28 1 1 1YDM MSE A 82 ? UNP P54491 MET 82 'MODIFIED RESIDUE' 82 2 1 1YDM MSE A 119 ? UNP P54491 MET 119 'MODIFIED RESIDUE' 119 3 2 1YDM MSE B 28 ? UNP P54491 MET 28 'MODIFIED RESIDUE' 28 4 2 1YDM MSE B 82 ? UNP P54491 MET 82 'MODIFIED RESIDUE' 82 5 2 1YDM MSE B 119 ? UNP P54491 MET 119 'MODIFIED RESIDUE' 119 6 3 1YDM MSE C 28 ? UNP P54491 MET 28 'MODIFIED RESIDUE' 28 7 3 1YDM MSE C 82 ? UNP P54491 MET 82 'MODIFIED RESIDUE' 82 8 3 1YDM MSE C 119 ? UNP P54491 MET 119 'MODIFIED RESIDUE' 119 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YDM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 46.7 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '26% PEG8000, 50 mM Tris, 0.2M AmSO4, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-02-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97859 1.0 2 0.97897 1.0 3 0.97243 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97859,0.97897,0.97243 # _reflns.entry_id 1YDM _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 18301 _reflns.number_all 33714 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.5 _reflns.B_iso_Wilson_estimate 40.2 _reflns.pdbx_redundancy 1.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 75.5 _reflns_shell.Rmerge_I_obs 0.419 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YDM _refine.ls_number_reflns_obs 27410 _refine.ls_number_reflns_all 33714 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.5 _refine.pdbx_data_cutoff_high_absF 485972.82 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.35 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 65.7 _refine.ls_R_factor_obs 0.224 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.304 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1395 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 46.0 _refine.aniso_B[1][1] -17.31 _refine.aniso_B[2][2] 9.95 _refine.aniso_B[3][3] 7.36 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.70 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.292953 _refine.solvent_model_param_bsol 20.4111 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YDM _refine_analyze.Luzzati_coordinate_error_obs 0.33 _refine_analyze.Luzzati_sigma_a_obs 0.31 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.49 _refine_analyze.Luzzati_sigma_a_free 0.38 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4366 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 4438 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 28.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.77 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 2755 _refine_ls_shell.R_factor_R_work 0.268 _refine_ls_shell.percent_reflns_obs 41.6 _refine_ls_shell.R_factor_R_free 0.332 _refine_ls_shell.R_factor_R_free_error 0.028 _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 138 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1YDM _struct.title 'X-Ray structure of Northeast Structural Genomics target SR44' _struct.pdbx_descriptor 'Hypothetical protein yqgN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YDM _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;Northeast Structural Genomics, SR44, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, STRUCTURAL GENOMICS, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 4 ? LEU A 16 ? GLN A 4 LEU A 16 1 ? 13 HELX_P HELX_P2 2 SER A 17 ? SER A 34 ? SER A 17 SER A 34 1 ? 18 HELX_P HELX_P3 3 LEU A 35 ? ASN A 40 ? LEU A 35 ASN A 40 1 ? 6 HELX_P HELX_P4 4 THR A 56 ? GLU A 66 ? THR A 56 GLU A 66 1 ? 11 HELX_P HELX_P5 5 GLN A 92 ? ALA A 98 ? GLN A 92 ALA A 98 1 ? 7 HELX_P HELX_P6 6 ASN A 112 ? ILE A 116 ? ASN A 112 ILE A 116 5 ? 5 HELX_P HELX_P7 7 ARG A 142 ? GLU A 146 ? ARG A 142 GLU A 146 5 ? 5 HELX_P HELX_P8 8 LEU A 156 ? CYS A 158 ? LEU A 156 CYS A 158 5 ? 3 HELX_P HELX_P9 9 LEU B 5 ? LEU B 16 ? LEU B 5 LEU B 16 1 ? 12 HELX_P HELX_P10 10 SER B 17 ? SER B 34 ? SER B 17 SER B 34 1 ? 18 HELX_P HELX_P11 11 LEU B 35 ? ASN B 40 ? LEU B 35 ASN B 40 1 ? 6 HELX_P HELX_P12 12 THR B 56 ? GLU B 66 ? THR B 56 GLU B 66 1 ? 11 HELX_P HELX_P13 13 GLN B 92 ? ALA B 98 ? GLN B 92 ALA B 98 1 ? 7 HELX_P HELX_P14 14 ASN B 112 ? ILE B 116 ? ASN B 112 ILE B 116 5 ? 5 HELX_P HELX_P15 15 GLY B 138 ? LEU B 144 ? GLY B 138 LEU B 144 1 ? 7 HELX_P HELX_P16 16 SER B 145 ? TYR B 147 ? SER B 145 TYR B 147 5 ? 3 HELX_P HELX_P17 17 LEU B 156 ? CYS B 158 ? LEU B 156 CYS B 158 5 ? 3 HELX_P HELX_P18 18 GLN C 4 ? LEU C 16 ? GLN C 4 LEU C 16 1 ? 13 HELX_P HELX_P19 19 SER C 17 ? SER C 34 ? SER C 17 SER C 34 1 ? 18 HELX_P HELX_P20 20 LEU C 35 ? ASN C 40 ? LEU C 35 ASN C 40 1 ? 6 HELX_P HELX_P21 21 THR C 56 ? GLU C 66 ? THR C 56 GLU C 66 1 ? 11 HELX_P HELX_P22 22 GLN C 92 ? TYR C 97 ? GLN C 92 TYR C 97 1 ? 6 HELX_P HELX_P23 23 ASN C 112 ? ILE C 116 ? ASN C 112 ILE C 116 5 ? 5 HELX_P HELX_P24 24 GLY C 138 ? TYR C 147 ? GLY C 138 TYR C 147 1 ? 10 HELX_P HELX_P25 25 LEU C 156 ? CYS C 158 ? LEU C 156 CYS C 158 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 27 C ? ? ? 1_555 A MSE 28 N ? ? A ARG 27 A MSE 28 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 28 C ? ? ? 1_555 A TYR 29 N ? ? A MSE 28 A TYR 29 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A LYS 81 C ? ? ? 1_555 A MSE 82 N ? ? A LYS 81 A MSE 82 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 82 C ? ? ? 1_555 A GLN 83 N ? ? A MSE 82 A GLN 83 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A LEU 118 C ? ? ? 1_555 A MSE 119 N ? ? A LEU 118 A MSE 119 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale ? ? A MSE 119 C ? ? ? 1_555 A ILE 120 N ? ? A MSE 119 A ILE 120 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? B ARG 27 C ? ? ? 1_555 B MSE 28 N ? ? B ARG 27 B MSE 28 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? B MSE 28 C ? ? ? 1_555 B TYR 29 N ? ? B MSE 28 B TYR 29 1_555 ? ? ? ? ? ? ? 1.333 ? covale9 covale ? ? B LYS 81 C ? ? ? 1_555 B MSE 82 N ? ? B LYS 81 B MSE 82 1_555 ? ? ? ? ? ? ? 1.326 ? covale10 covale ? ? B MSE 82 C ? ? ? 1_555 B GLN 83 N ? ? B MSE 82 B GLN 83 1_555 ? ? ? ? ? ? ? 1.322 ? covale11 covale ? ? B LEU 118 C ? ? ? 1_555 B MSE 119 N ? ? B LEU 118 B MSE 119 1_555 ? ? ? ? ? ? ? 1.326 ? covale12 covale ? ? B MSE 119 C ? ? ? 1_555 B ILE 120 N ? ? B MSE 119 B ILE 120 1_555 ? ? ? ? ? ? ? 1.325 ? covale13 covale ? ? C ARG 27 C ? ? ? 1_555 C MSE 28 N ? ? C ARG 27 C MSE 28 1_555 ? ? ? ? ? ? ? 1.325 ? covale14 covale ? ? C MSE 28 C ? ? ? 1_555 C TYR 29 N ? ? C MSE 28 C TYR 29 1_555 ? ? ? ? ? ? ? 1.332 ? covale15 covale ? ? C LYS 81 C ? ? ? 1_555 C MSE 82 N ? ? C LYS 81 C MSE 82 1_555 ? ? ? ? ? ? ? 1.328 ? covale16 covale ? ? C MSE 82 C ? ? ? 1_555 C GLN 83 N ? ? C MSE 82 C GLN 83 1_555 ? ? ? ? ? ? ? 1.327 ? covale17 covale ? ? C LEU 118 C ? ? ? 1_555 C MSE 119 N ? ? C LEU 118 C MSE 119 1_555 ? ? ? ? ? ? ? 1.328 ? covale18 covale ? ? C MSE 119 C ? ? ? 1_555 C ILE 120 N ? ? C MSE 119 C ILE 120 1_555 ? ? ? ? ? ? ? 1.333 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 3 ? C ? 7 ? D ? 3 ? E ? 6 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel C 5 6 ? parallel C 6 7 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel E 1 2 ? anti-parallel E 2 3 ? parallel E 3 4 ? parallel E 4 5 ? parallel E 5 6 ? parallel F 1 2 ? anti-parallel F 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 84 ? THR A 86 ? PHE A 84 THR A 86 A 2 GLN A 69 ? PRO A 73 ? GLN A 69 PRO A 73 A 3 THR A 43 ? ALA A 45 ? THR A 43 ALA A 45 A 4 LEU A 118 ? ILE A 120 ? LEU A 118 ILE A 120 A 5 LYS A 150 ? LEU A 154 ? LYS A 150 LEU A 154 A 6 LYS A 175 ? ILE A 177 ? LYS A 175 ILE A 177 A 7 ILE A 182 ? SER A 184 ? ILE A 182 SER A 184 B 1 ARG A 132 ? VAL A 133 ? ARG A 132 VAL A 133 B 2 CYS A 125 ? ASP A 127 ? CYS A 125 ASP A 127 B 3 LEU A 160 ? PHE A 161 ? LEU A 160 PHE A 161 C 1 ARG B 85 ? THR B 86 ? ARG B 85 THR B 86 C 2 GLN B 69 ? ILE B 72 ? GLN B 69 ILE B 72 C 3 THR B 43 ? ALA B 45 ? THR B 43 ALA B 45 C 4 LEU B 118 ? ILE B 120 ? LEU B 118 ILE B 120 C 5 LYS B 150 ? LEU B 154 ? LYS B 150 LEU B 154 C 6 LYS B 175 ? ILE B 177 ? LYS B 175 ILE B 177 C 7 ILE B 182 ? SER B 184 ? ILE B 182 SER B 184 D 1 ARG B 132 ? VAL B 133 ? ARG B 132 VAL B 133 D 2 CYS B 125 ? ASP B 127 ? CYS B 125 ASP B 127 D 3 LEU B 160 ? PHE B 161 ? LEU B 160 PHE B 161 E 1 MSE C 82 ? THR C 86 ? MSE C 82 THR C 86 E 2 GLN C 69 ? CYS C 75 ? GLN C 69 CYS C 75 E 3 THR C 43 ? ALA C 45 ? THR C 43 ALA C 45 E 4 LEU C 118 ? VAL C 121 ? LEU C 118 VAL C 121 E 5 VAL C 152 ? LEU C 154 ? VAL C 152 LEU C 154 E 6 LYS C 175 ? ILE C 177 ? LYS C 175 ILE C 177 F 1 ARG C 132 ? VAL C 133 ? ARG C 132 VAL C 133 F 2 CYS C 125 ? ASP C 127 ? CYS C 125 ASP C 127 F 3 LEU C 160 ? PHE C 161 ? LEU C 160 PHE C 161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 85 ? O ARG A 85 N ILE A 72 ? N ILE A 72 A 2 3 O GLN A 69 ? O GLN A 69 N ILE A 44 ? N ILE A 44 A 3 4 N ALA A 45 ? N ALA A 45 O LEU A 118 ? O LEU A 118 A 4 5 N MSE A 119 ? N MSE A 119 O VAL A 152 ? O VAL A 152 A 5 6 N SER A 153 ? N SER A 153 O ILE A 177 ? O ILE A 177 A 6 7 N LEU A 176 ? N LEU A 176 O ILE A 183 ? O ILE A 183 B 1 2 O VAL A 133 ? O VAL A 133 N CYS A 125 ? N CYS A 125 B 2 3 N PHE A 126 ? N PHE A 126 O PHE A 161 ? O PHE A 161 C 1 2 O ARG B 85 ? O ARG B 85 N ILE B 72 ? N ILE B 72 C 2 3 O CYS B 71 ? O CYS B 71 N ILE B 44 ? N ILE B 44 C 3 4 N ALA B 45 ? N ALA B 45 O ILE B 120 ? O ILE B 120 C 4 5 N MSE B 119 ? N MSE B 119 O VAL B 152 ? O VAL B 152 C 5 6 N SER B 153 ? N SER B 153 O LYS B 175 ? O LYS B 175 C 6 7 N LEU B 176 ? N LEU B 176 O ILE B 183 ? O ILE B 183 D 1 2 O VAL B 133 ? O VAL B 133 N CYS B 125 ? N CYS B 125 D 2 3 N PHE B 126 ? N PHE B 126 O PHE B 161 ? O PHE B 161 E 1 2 O ARG C 85 ? O ARG C 85 N ILE C 72 ? N ILE C 72 E 2 3 O CYS C 71 ? O CYS C 71 N ILE C 44 ? N ILE C 44 E 3 4 N ALA C 45 ? N ALA C 45 O ILE C 120 ? O ILE C 120 E 4 5 N VAL C 121 ? N VAL C 121 O VAL C 152 ? O VAL C 152 E 5 6 N SER C 153 ? N SER C 153 O LYS C 175 ? O LYS C 175 F 1 2 O VAL C 133 ? O VAL C 133 N CYS C 125 ? N CYS C 125 F 2 3 N PHE C 126 ? N PHE C 126 O PHE C 161 ? O PHE C 161 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 A 301' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE SO4 B 302' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 C 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 132 ? ARG A 132 . ? 1_555 ? 2 AC1 8 GLY A 134 ? GLY A 134 . ? 1_555 ? 3 AC1 8 PHE A 135 ? PHE A 135 . ? 1_555 ? 4 AC1 8 GLY A 136 ? GLY A 136 . ? 1_555 ? 5 AC1 8 GLY A 137 ? GLY A 137 . ? 1_555 ? 6 AC1 8 GLY A 138 ? GLY A 138 . ? 1_555 ? 7 AC1 8 TYR A 139 ? TYR A 139 . ? 1_555 ? 8 AC1 8 TYR A 140 ? TYR A 140 . ? 1_555 ? 9 AC2 9 ARG B 132 ? ARG B 132 . ? 1_555 ? 10 AC2 9 GLY B 134 ? GLY B 134 . ? 1_555 ? 11 AC2 9 PHE B 135 ? PHE B 135 . ? 1_555 ? 12 AC2 9 GLY B 136 ? GLY B 136 . ? 1_555 ? 13 AC2 9 GLY B 137 ? GLY B 137 . ? 1_555 ? 14 AC2 9 GLY B 138 ? GLY B 138 . ? 1_555 ? 15 AC2 9 TYR B 139 ? TYR B 139 . ? 1_555 ? 16 AC2 9 TYR B 140 ? TYR B 140 . ? 1_555 ? 17 AC2 9 ASP B 141 ? ASP B 141 . ? 1_555 ? 18 AC3 7 GLY C 134 ? GLY C 134 . ? 1_555 ? 19 AC3 7 PHE C 135 ? PHE C 135 . ? 1_555 ? 20 AC3 7 GLY C 136 ? GLY C 136 . ? 1_555 ? 21 AC3 7 GLY C 138 ? GLY C 138 . ? 1_555 ? 22 AC3 7 TYR C 139 ? TYR C 139 . ? 1_555 ? 23 AC3 7 TYR C 140 ? TYR C 140 . ? 1_555 ? 24 AC3 7 HOH I . ? HOH C 309 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YDM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YDM _atom_sites.fract_transf_matrix[1][1] 0.011723 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003139 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022586 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012137 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LYS 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 MSE 28 28 28 MSE MSE A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 TRP 64 64 64 TRP TRP A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 CYS 71 71 71 CYS CYS A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 HIS 76 76 ? ? ? A . n A 1 77 PRO 77 77 ? ? ? A . n A 1 78 ASP 78 78 ? ? ? A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 MSE 82 82 82 MSE MSE A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 ILE 105 105 ? ? ? A . n A 1 106 GLU 106 106 ? ? ? A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 MSE 119 119 119 MSE MSE A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 CYS 125 125 125 CYS CYS A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 CYS 158 158 158 CYS CYS A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 HIS 163 163 163 HIS HIS A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 HIS 169 169 169 HIS HIS A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 PRO 172 172 172 PRO PRO A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 HIS 174 174 174 HIS HIS A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 ASP 180 180 180 ASP ASP A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 ILE 182 182 182 ILE ILE A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 SER 184 184 184 SER SER A . n A 1 185 CYS 185 185 185 CYS CYS A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 SER 187 187 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 LYS 2 2 ? ? ? B . n B 1 3 SER 3 3 ? ? ? B . n B 1 4 GLN 4 4 4 GLN GLN B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 ARG 6 6 6 ARG ARG B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 ALA 12 12 12 ALA ALA B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 SER 14 14 14 SER SER B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 ASN 18 18 18 ASN ASN B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 GLN 23 23 23 GLN GLN B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 MSE 28 28 28 MSE MSE B . n B 1 29 TYR 29 29 29 TYR TYR B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 TYR 31 31 31 TYR TYR B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 PHE 33 33 33 PHE PHE B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 PRO 36 36 36 PRO PRO B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 TRP 38 38 38 TRP TRP B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 ALA 45 45 45 ALA ALA B . n B 1 46 VAL 46 46 46 VAL VAL B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 ILE 48 48 48 ILE ILE B . n B 1 49 SER 49 49 49 SER SER B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 LEU 52 52 52 LEU LEU B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 PRO 58 58 58 PRO PRO B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 GLU 61 61 61 GLU GLU B . n B 1 62 GLN 62 62 62 GLN GLN B . n B 1 63 ALA 63 63 63 ALA ALA B . n B 1 64 TRP 64 64 64 TRP TRP B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 LYS 68 68 68 LYS LYS B . n B 1 69 GLN 69 69 69 GLN GLN B . n B 1 70 VAL 70 70 70 VAL VAL B . n B 1 71 CYS 71 71 71 CYS CYS B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 PRO 73 73 73 PRO PRO B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 CYS 75 75 75 CYS CYS B . n B 1 76 HIS 76 76 76 HIS HIS B . n B 1 77 PRO 77 77 77 PRO PRO B . n B 1 78 ASP 78 78 78 ASP ASP B . n B 1 79 THR 79 79 79 THR THR B . n B 1 80 LYS 80 80 80 LYS LYS B . n B 1 81 LYS 81 81 81 LYS LYS B . n B 1 82 MSE 82 82 82 MSE MSE B . n B 1 83 GLN 83 83 83 GLN GLN B . n B 1 84 PHE 84 84 84 PHE PHE B . n B 1 85 ARG 85 85 85 ARG ARG B . n B 1 86 THR 86 86 86 THR THR B . n B 1 87 TYR 87 87 87 TYR TYR B . n B 1 88 GLN 88 88 88 GLN GLN B . n B 1 89 THR 89 89 89 THR THR B . n B 1 90 ASP 90 90 90 ASP ASP B . n B 1 91 ASP 91 91 91 ASP ASP B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 GLU 94 94 94 GLU GLU B . n B 1 95 THR 95 95 95 THR THR B . n B 1 96 VAL 96 96 96 VAL VAL B . n B 1 97 TYR 97 97 97 TYR TYR B . n B 1 98 ALA 98 98 98 ALA ALA B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 LEU 100 100 100 LEU LEU B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 GLU 102 102 102 GLU GLU B . n B 1 103 PRO 103 103 103 PRO PRO B . n B 1 104 VAL 104 104 104 VAL VAL B . n B 1 105 ILE 105 105 105 ILE ILE B . n B 1 106 GLU 106 106 ? ? ? B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 THR 108 108 108 THR THR B . n B 1 109 LYS 109 109 109 LYS LYS B . n B 1 110 GLU 110 110 110 GLU GLU B . n B 1 111 VAL 111 111 111 VAL VAL B . n B 1 112 ASN 112 112 112 ASN ASN B . n B 1 113 PRO 113 113 113 PRO PRO B . n B 1 114 SER 114 114 114 SER SER B . n B 1 115 GLN 115 115 115 GLN GLN B . n B 1 116 ILE 116 116 116 ILE ILE B . n B 1 117 ASP 117 117 117 ASP ASP B . n B 1 118 LEU 118 118 118 LEU LEU B . n B 1 119 MSE 119 119 119 MSE MSE B . n B 1 120 ILE 120 120 120 ILE ILE B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 PRO 122 122 122 PRO PRO B . n B 1 123 GLY 123 123 123 GLY GLY B . n B 1 124 VAL 124 124 124 VAL VAL B . n B 1 125 CYS 125 125 125 CYS CYS B . n B 1 126 PHE 126 126 126 PHE PHE B . n B 1 127 ASP 127 127 127 ASP ASP B . n B 1 128 VAL 128 128 128 VAL VAL B . n B 1 129 ASN 129 129 129 ASN ASN B . n B 1 130 GLY 130 130 130 GLY GLY B . n B 1 131 PHE 131 131 131 PHE PHE B . n B 1 132 ARG 132 132 132 ARG ARG B . n B 1 133 VAL 133 133 133 VAL VAL B . n B 1 134 GLY 134 134 134 GLY GLY B . n B 1 135 PHE 135 135 135 PHE PHE B . n B 1 136 GLY 136 136 136 GLY GLY B . n B 1 137 GLY 137 137 137 GLY GLY B . n B 1 138 GLY 138 138 138 GLY GLY B . n B 1 139 TYR 139 139 139 TYR TYR B . n B 1 140 TYR 140 140 140 TYR TYR B . n B 1 141 ASP 141 141 141 ASP ASP B . n B 1 142 ARG 142 142 142 ARG ARG B . n B 1 143 TYR 143 143 143 TYR TYR B . n B 1 144 LEU 144 144 144 LEU LEU B . n B 1 145 SER 145 145 145 SER SER B . n B 1 146 GLU 146 146 146 GLU GLU B . n B 1 147 TYR 147 147 147 TYR TYR B . n B 1 148 GLU 148 148 148 GLU GLU B . n B 1 149 GLY 149 149 149 GLY GLY B . n B 1 150 LYS 150 150 150 LYS LYS B . n B 1 151 THR 151 151 151 THR THR B . n B 1 152 VAL 152 152 152 VAL VAL B . n B 1 153 SER 153 153 153 SER SER B . n B 1 154 LEU 154 154 154 LEU LEU B . n B 1 155 LEU 155 155 155 LEU LEU B . n B 1 156 LEU 156 156 156 LEU LEU B . n B 1 157 GLU 157 157 157 GLU GLU B . n B 1 158 CYS 158 158 158 CYS CYS B . n B 1 159 GLN 159 159 159 GLN GLN B . n B 1 160 LEU 160 160 160 LEU LEU B . n B 1 161 PHE 161 161 161 PHE PHE B . n B 1 162 ALA 162 162 162 ALA ALA B . n B 1 163 HIS 163 163 163 HIS HIS B . n B 1 164 VAL 164 164 164 VAL VAL B . n B 1 165 PRO 165 165 165 PRO PRO B . n B 1 166 ARG 166 166 166 ARG ARG B . n B 1 167 LEU 167 167 167 LEU LEU B . n B 1 168 PRO 168 168 168 PRO PRO B . n B 1 169 HIS 169 169 169 HIS HIS B . n B 1 170 ASP 170 170 170 ASP ASP B . n B 1 171 ILE 171 171 171 ILE ILE B . n B 1 172 PRO 172 172 172 PRO PRO B . n B 1 173 VAL 173 173 173 VAL VAL B . n B 1 174 HIS 174 174 174 HIS HIS B . n B 1 175 LYS 175 175 175 LYS LYS B . n B 1 176 LEU 176 176 176 LEU LEU B . n B 1 177 ILE 177 177 177 ILE ILE B . n B 1 178 THR 178 178 178 THR THR B . n B 1 179 GLU 179 179 179 GLU GLU B . n B 1 180 ASP 180 180 180 ASP ASP B . n B 1 181 ARG 181 181 181 ARG ARG B . n B 1 182 ILE 182 182 182 ILE ILE B . n B 1 183 ILE 183 183 183 ILE ILE B . n B 1 184 SER 184 184 184 SER SER B . n B 1 185 CYS 185 185 185 CYS CYS B . n B 1 186 PHE 186 186 186 PHE PHE B . n B 1 187 SER 187 187 ? ? ? B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 LYS 2 2 ? ? ? C . n C 1 3 SER 3 3 ? ? ? C . n C 1 4 GLN 4 4 4 GLN GLN C . n C 1 5 LEU 5 5 5 LEU LEU C . n C 1 6 ARG 6 6 6 ARG ARG C . n C 1 7 LYS 7 7 7 LYS LYS C . n C 1 8 LYS 8 8 8 LYS LYS C . n C 1 9 THR 9 9 9 THR THR C . n C 1 10 LEU 10 10 10 LEU LEU C . n C 1 11 GLU 11 11 11 GLU GLU C . n C 1 12 ALA 12 12 12 ALA ALA C . n C 1 13 LEU 13 13 13 LEU LEU C . n C 1 14 SER 14 14 14 SER SER C . n C 1 15 ALA 15 15 15 ALA ALA C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 SER 17 17 17 SER SER C . n C 1 18 ASN 18 18 18 ASN ASN C . n C 1 19 GLU 19 19 19 GLU GLU C . n C 1 20 ASP 20 20 20 ASP ASP C . n C 1 21 ILE 21 21 21 ILE ILE C . n C 1 22 LEU 22 22 22 LEU LEU C . n C 1 23 GLN 23 23 23 GLN GLN C . n C 1 24 LYS 24 24 24 LYS LYS C . n C 1 25 THR 25 25 25 THR THR C . n C 1 26 GLU 26 26 26 GLU GLU C . n C 1 27 ARG 27 27 27 ARG ARG C . n C 1 28 MSE 28 28 28 MSE MSE C . n C 1 29 TYR 29 29 29 TYR TYR C . n C 1 30 LYS 30 30 30 LYS LYS C . n C 1 31 TYR 31 31 31 TYR TYR C . n C 1 32 LEU 32 32 32 LEU LEU C . n C 1 33 PHE 33 33 33 PHE PHE C . n C 1 34 SER 34 34 34 SER SER C . n C 1 35 LEU 35 35 35 LEU LEU C . n C 1 36 PRO 36 36 36 PRO PRO C . n C 1 37 GLU 37 37 37 GLU GLU C . n C 1 38 TRP 38 38 38 TRP TRP C . n C 1 39 GLN 39 39 39 GLN GLN C . n C 1 40 ASN 40 40 40 ASN ASN C . n C 1 41 ALA 41 41 41 ALA ALA C . n C 1 42 GLY 42 42 42 GLY GLY C . n C 1 43 THR 43 43 43 THR THR C . n C 1 44 ILE 44 44 44 ILE ILE C . n C 1 45 ALA 45 45 45 ALA ALA C . n C 1 46 VAL 46 46 46 VAL VAL C . n C 1 47 THR 47 47 47 THR THR C . n C 1 48 ILE 48 48 48 ILE ILE C . n C 1 49 SER 49 49 49 SER SER C . n C 1 50 ARG 50 50 50 ARG ARG C . n C 1 51 GLY 51 51 51 GLY GLY C . n C 1 52 LEU 52 52 52 LEU LEU C . n C 1 53 GLU 53 53 53 GLU GLU C . n C 1 54 ILE 54 54 54 ILE ILE C . n C 1 55 PRO 55 55 55 PRO PRO C . n C 1 56 THR 56 56 56 THR THR C . n C 1 57 ARG 57 57 57 ARG ARG C . n C 1 58 PRO 58 58 58 PRO PRO C . n C 1 59 VAL 59 59 59 VAL VAL C . n C 1 60 ILE 60 60 60 ILE ILE C . n C 1 61 GLU 61 61 61 GLU GLU C . n C 1 62 GLN 62 62 62 GLN GLN C . n C 1 63 ALA 63 63 63 ALA ALA C . n C 1 64 TRP 64 64 64 TRP TRP C . n C 1 65 GLU 65 65 65 GLU GLU C . n C 1 66 GLU 66 66 66 GLU GLU C . n C 1 67 GLY 67 67 67 GLY GLY C . n C 1 68 LYS 68 68 68 LYS LYS C . n C 1 69 GLN 69 69 69 GLN GLN C . n C 1 70 VAL 70 70 70 VAL VAL C . n C 1 71 CYS 71 71 71 CYS CYS C . n C 1 72 ILE 72 72 72 ILE ILE C . n C 1 73 PRO 73 73 73 PRO PRO C . n C 1 74 LYS 74 74 74 LYS LYS C . n C 1 75 CYS 75 75 75 CYS CYS C . n C 1 76 HIS 76 76 76 HIS HIS C . n C 1 77 PRO 77 77 77 PRO PRO C . n C 1 78 ASP 78 78 78 ASP ASP C . n C 1 79 THR 79 79 79 THR THR C . n C 1 80 LYS 80 80 80 LYS LYS C . n C 1 81 LYS 81 81 81 LYS LYS C . n C 1 82 MSE 82 82 82 MSE MSE C . n C 1 83 GLN 83 83 83 GLN GLN C . n C 1 84 PHE 84 84 84 PHE PHE C . n C 1 85 ARG 85 85 85 ARG ARG C . n C 1 86 THR 86 86 86 THR THR C . n C 1 87 TYR 87 87 87 TYR TYR C . n C 1 88 GLN 88 88 88 GLN GLN C . n C 1 89 THR 89 89 89 THR THR C . n C 1 90 ASP 90 90 90 ASP ASP C . n C 1 91 ASP 91 91 91 ASP ASP C . n C 1 92 GLN 92 92 92 GLN GLN C . n C 1 93 LEU 93 93 93 LEU LEU C . n C 1 94 GLU 94 94 94 GLU GLU C . n C 1 95 THR 95 95 95 THR THR C . n C 1 96 VAL 96 96 96 VAL VAL C . n C 1 97 TYR 97 97 97 TYR TYR C . n C 1 98 ALA 98 98 98 ALA ALA C . n C 1 99 GLY 99 99 99 GLY GLY C . n C 1 100 LEU 100 100 100 LEU LEU C . n C 1 101 LEU 101 101 101 LEU LEU C . n C 1 102 GLU 102 102 102 GLU GLU C . n C 1 103 PRO 103 103 103 PRO PRO C . n C 1 104 VAL 104 104 104 VAL VAL C . n C 1 105 ILE 105 105 ? ? ? C . n C 1 106 GLU 106 106 106 GLU GLU C . n C 1 107 LYS 107 107 107 LYS LYS C . n C 1 108 THR 108 108 108 THR THR C . n C 1 109 LYS 109 109 109 LYS LYS C . n C 1 110 GLU 110 110 110 GLU GLU C . n C 1 111 VAL 111 111 111 VAL VAL C . n C 1 112 ASN 112 112 112 ASN ASN C . n C 1 113 PRO 113 113 113 PRO PRO C . n C 1 114 SER 114 114 114 SER SER C . n C 1 115 GLN 115 115 115 GLN GLN C . n C 1 116 ILE 116 116 116 ILE ILE C . n C 1 117 ASP 117 117 117 ASP ASP C . n C 1 118 LEU 118 118 118 LEU LEU C . n C 1 119 MSE 119 119 119 MSE MSE C . n C 1 120 ILE 120 120 120 ILE ILE C . n C 1 121 VAL 121 121 121 VAL VAL C . n C 1 122 PRO 122 122 122 PRO PRO C . n C 1 123 GLY 123 123 123 GLY GLY C . n C 1 124 VAL 124 124 124 VAL VAL C . n C 1 125 CYS 125 125 125 CYS CYS C . n C 1 126 PHE 126 126 126 PHE PHE C . n C 1 127 ASP 127 127 127 ASP ASP C . n C 1 128 VAL 128 128 128 VAL VAL C . n C 1 129 ASN 129 129 129 ASN ASN C . n C 1 130 GLY 130 130 130 GLY GLY C . n C 1 131 PHE 131 131 131 PHE PHE C . n C 1 132 ARG 132 132 132 ARG ARG C . n C 1 133 VAL 133 133 133 VAL VAL C . n C 1 134 GLY 134 134 134 GLY GLY C . n C 1 135 PHE 135 135 135 PHE PHE C . n C 1 136 GLY 136 136 136 GLY GLY C . n C 1 137 GLY 137 137 137 GLY GLY C . n C 1 138 GLY 138 138 138 GLY GLY C . n C 1 139 TYR 139 139 139 TYR TYR C . n C 1 140 TYR 140 140 140 TYR TYR C . n C 1 141 ASP 141 141 141 ASP ASP C . n C 1 142 ARG 142 142 142 ARG ARG C . n C 1 143 TYR 143 143 143 TYR TYR C . n C 1 144 LEU 144 144 144 LEU LEU C . n C 1 145 SER 145 145 145 SER SER C . n C 1 146 GLU 146 146 146 GLU GLU C . n C 1 147 TYR 147 147 147 TYR TYR C . n C 1 148 GLU 148 148 148 GLU GLU C . n C 1 149 GLY 149 149 149 GLY GLY C . n C 1 150 LYS 150 150 150 LYS LYS C . n C 1 151 THR 151 151 151 THR THR C . n C 1 152 VAL 152 152 152 VAL VAL C . n C 1 153 SER 153 153 153 SER SER C . n C 1 154 LEU 154 154 154 LEU LEU C . n C 1 155 LEU 155 155 155 LEU LEU C . n C 1 156 LEU 156 156 156 LEU LEU C . n C 1 157 GLU 157 157 157 GLU GLU C . n C 1 158 CYS 158 158 158 CYS CYS C . n C 1 159 GLN 159 159 159 GLN GLN C . n C 1 160 LEU 160 160 160 LEU LEU C . n C 1 161 PHE 161 161 161 PHE PHE C . n C 1 162 ALA 162 162 162 ALA ALA C . n C 1 163 HIS 163 163 163 HIS HIS C . n C 1 164 VAL 164 164 164 VAL VAL C . n C 1 165 PRO 165 165 165 PRO PRO C . n C 1 166 ARG 166 166 166 ARG ARG C . n C 1 167 LEU 167 167 167 LEU LEU C . n C 1 168 PRO 168 168 168 PRO PRO C . n C 1 169 HIS 169 169 169 HIS HIS C . n C 1 170 ASP 170 170 170 ASP ASP C . n C 1 171 ILE 171 171 171 ILE ILE C . n C 1 172 PRO 172 172 172 PRO PRO C . n C 1 173 VAL 173 173 173 VAL VAL C . n C 1 174 HIS 174 174 174 HIS HIS C . n C 1 175 LYS 175 175 175 LYS LYS C . n C 1 176 LEU 176 176 176 LEU LEU C . n C 1 177 ILE 177 177 177 ILE ILE C . n C 1 178 THR 178 178 178 THR THR C . n C 1 179 GLU 179 179 179 GLU GLU C . n C 1 180 ASP 180 180 180 ASP ASP C . n C 1 181 ARG 181 181 181 ARG ARG C . n C 1 182 ILE 182 182 182 ILE ILE C . n C 1 183 ILE 183 183 183 ILE ILE C . n C 1 184 SER 184 184 184 SER SER C . n C 1 185 CYS 185 185 185 CYS CYS C . n C 1 186 PHE 186 186 186 PHE PHE C . n C 1 187 SER 187 187 ? ? ? C . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 1 301 301 SO4 SO4 A . E 2 SO4 1 302 302 SO4 SO4 B . F 2 SO4 1 303 303 SO4 SO4 C . G 3 HOH 1 302 3 HOH HOH A . G 3 HOH 2 303 11 HOH HOH A . G 3 HOH 3 304 41 HOH HOH A . G 3 HOH 4 305 39 HOH HOH A . G 3 HOH 5 306 42 HOH HOH A . G 3 HOH 6 307 49 HOH HOH A . G 3 HOH 7 308 71 HOH HOH A . G 3 HOH 8 309 30 HOH HOH A . G 3 HOH 9 310 68 HOH HOH A . G 3 HOH 10 311 6 HOH HOH A . G 3 HOH 11 312 14 HOH HOH A . G 3 HOH 12 313 79 HOH HOH A . G 3 HOH 13 314 35 HOH HOH A . G 3 HOH 14 315 40 HOH HOH A . H 3 HOH 1 303 8 HOH HOH B . H 3 HOH 2 304 47 HOH HOH B . H 3 HOH 3 305 44 HOH HOH B . H 3 HOH 4 306 48 HOH HOH B . H 3 HOH 5 307 72 HOH HOH B . H 3 HOH 6 308 9 HOH HOH B . H 3 HOH 7 309 82 HOH HOH B . H 3 HOH 8 310 18 HOH HOH B . H 3 HOH 9 311 81 HOH HOH B . H 3 HOH 10 312 10 HOH HOH B . H 3 HOH 11 313 51 HOH HOH B . H 3 HOH 12 314 67 HOH HOH B . H 3 HOH 13 315 20 HOH HOH B . H 3 HOH 14 316 58 HOH HOH B . H 3 HOH 15 317 62 HOH HOH B . H 3 HOH 16 318 69 HOH HOH B . H 3 HOH 17 319 55 HOH HOH B . H 3 HOH 18 320 33 HOH HOH B . H 3 HOH 19 321 78 HOH HOH B . I 3 HOH 1 304 12 HOH HOH C . I 3 HOH 2 305 29 HOH HOH C . I 3 HOH 3 306 17 HOH HOH C . I 3 HOH 4 307 2 HOH HOH C . I 3 HOH 5 308 45 HOH HOH C . I 3 HOH 6 309 1 HOH HOH C . I 3 HOH 7 310 7 HOH HOH C . I 3 HOH 8 311 56 HOH HOH C . I 3 HOH 9 312 36 HOH HOH C . I 3 HOH 10 313 4 HOH HOH C . I 3 HOH 11 314 19 HOH HOH C . I 3 HOH 12 315 53 HOH HOH C . I 3 HOH 13 316 5 HOH HOH C . I 3 HOH 14 317 28 HOH HOH C . I 3 HOH 15 318 34 HOH HOH C . I 3 HOH 16 319 25 HOH HOH C . I 3 HOH 17 320 23 HOH HOH C . I 3 HOH 18 321 60 HOH HOH C . I 3 HOH 19 322 50 HOH HOH C . I 3 HOH 20 323 63 HOH HOH C . I 3 HOH 21 324 74 HOH HOH C . I 3 HOH 22 325 22 HOH HOH C . I 3 HOH 23 326 80 HOH HOH C . I 3 HOH 24 327 75 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 28 A MSE 28 ? MET SELENOMETHIONINE 2 A MSE 82 A MSE 82 ? MET SELENOMETHIONINE 3 A MSE 119 A MSE 119 ? MET SELENOMETHIONINE 4 B MSE 28 B MSE 28 ? MET SELENOMETHIONINE 5 B MSE 82 B MSE 82 ? MET SELENOMETHIONINE 6 B MSE 119 B MSE 119 ? MET SELENOMETHIONINE 7 C MSE 28 C MSE 28 ? MET SELENOMETHIONINE 8 C MSE 82 C MSE 82 ? MET SELENOMETHIONINE 9 C MSE 119 C MSE 119 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-01-18 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 80 ? ? -73.45 34.78 2 1 PRO A 103 ? ? -64.38 6.77 3 1 GLU A 110 ? ? -97.11 35.10 4 1 VAL A 111 ? ? -9.91 101.96 5 1 GLU A 148 ? ? -147.21 26.44 6 1 PRO A 165 ? ? -39.30 107.89 7 1 PRO A 168 ? ? -63.27 3.08 8 1 ARG A 181 ? ? -161.68 -157.04 9 1 CYS A 185 ? ? 177.91 -159.08 10 1 LYS B 74 ? ? -154.35 46.81 11 1 ASP B 78 ? ? 64.97 -8.87 12 1 LYS B 80 ? ? -91.80 33.84 13 1 LEU B 101 ? ? 177.27 111.06 14 1 PRO B 165 ? ? -48.25 101.31 15 1 PRO B 168 ? ? -68.97 90.76 16 1 HIS B 169 ? ? -168.02 -104.11 17 1 ILE B 177 ? ? -165.76 111.76 18 1 THR B 178 ? ? -111.07 -166.41 19 1 ALA C 63 ? ? -57.45 -73.29 20 1 ASP C 78 ? ? -65.00 -87.79 21 1 THR C 79 ? ? -103.88 -158.91 22 1 THR C 89 ? ? -31.88 126.59 23 1 LEU C 101 ? ? -170.63 124.92 24 1 LYS C 109 ? ? 55.40 82.14 25 1 ASP C 117 ? ? -60.04 -85.62 26 1 VAL C 128 ? ? -54.58 -8.22 27 1 PRO C 168 ? ? -29.84 148.10 28 1 HIS C 169 ? ? 73.18 33.27 29 1 ASP C 180 ? ? -132.94 -73.70 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LYS 2 ? A LYS 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A HIS 76 ? A HIS 76 5 1 Y 1 A PRO 77 ? A PRO 77 6 1 Y 1 A ASP 78 ? A ASP 78 7 1 Y 1 A ILE 105 ? A ILE 105 8 1 Y 1 A GLU 106 ? A GLU 106 9 1 Y 1 A SER 187 ? A SER 187 10 1 Y 1 B MET 1 ? B MET 1 11 1 Y 1 B LYS 2 ? B LYS 2 12 1 Y 1 B SER 3 ? B SER 3 13 1 Y 1 B GLU 106 ? B GLU 106 14 1 Y 1 B SER 187 ? B SER 187 15 1 Y 1 C MET 1 ? C MET 1 16 1 Y 1 C LYS 2 ? C LYS 2 17 1 Y 1 C SER 3 ? C SER 3 18 1 Y 1 C ILE 105 ? C ILE 105 19 1 Y 1 C SER 187 ? C SER 187 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #