data_1YEA # _entry.id 1YEA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YEA WWPDB D_1000177377 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YEA _pdbx_database_status.recvd_initial_deposition_date 1991-10-29 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Murphy, M.E.P.' 1 'Brayer, G.D.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure determination and analysis of yeast iso-2-cytochrome c and a composite mutant protein.' J.Mol.Biol. 227 160 176 1992 JMOBAK UK 0022-2836 0070 ? 1326054 '10.1016/0022-2836(92)90689-H' 1 'Crystallization of Yeast Iso-2-Cytochrome C Using a Novel Hair Seeding Technique' J.Mol.Biol. 206 783 ? 1989 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Murphy, M.E.' 1 ? primary 'Nall, B.T.' 2 ? primary 'Brayer, G.D.' 3 ? 1 'Leung, C.J.' 4 ? 1 'Nall, B.T.' 5 ? 1 'Brayer, G.D.' 6 ? # _cell.entry_id 1YEA _cell.length_a 36.440 _cell.length_b 36.440 _cell.length_c 137.860 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YEA _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CYTOCHROME C' 12466.237 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'HEME C' 618.503 1 ? ? ? ? 4 water nat water 18.015 58 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;AKESTGFKPGSAKKGATLFKTRCQQCHTIEEGGPNKVGPNLHGIFGRHSGQVKGYSYTDANINKNVKWDEDSMSEYLTNP (M3L)KYIPGTKMAFAGLKKEKDRNDLITYMTKAAK ; _entity_poly.pdbx_seq_one_letter_code_can ;AKESTGFKPGSAKKGATLFKTRCQQCHTIEEGGPNKVGPNLHGIFGRHSGQVKGYSYTDANINKNVKWDEDSMSEYLTNP KKYIPGTKMAFAGLKKEKDRNDLITYMTKAAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LYS n 1 3 GLU n 1 4 SER n 1 5 THR n 1 6 GLY n 1 7 PHE n 1 8 LYS n 1 9 PRO n 1 10 GLY n 1 11 SER n 1 12 ALA n 1 13 LYS n 1 14 LYS n 1 15 GLY n 1 16 ALA n 1 17 THR n 1 18 LEU n 1 19 PHE n 1 20 LYS n 1 21 THR n 1 22 ARG n 1 23 CYS n 1 24 GLN n 1 25 GLN n 1 26 CYS n 1 27 HIS n 1 28 THR n 1 29 ILE n 1 30 GLU n 1 31 GLU n 1 32 GLY n 1 33 GLY n 1 34 PRO n 1 35 ASN n 1 36 LYS n 1 37 VAL n 1 38 GLY n 1 39 PRO n 1 40 ASN n 1 41 LEU n 1 42 HIS n 1 43 GLY n 1 44 ILE n 1 45 PHE n 1 46 GLY n 1 47 ARG n 1 48 HIS n 1 49 SER n 1 50 GLY n 1 51 GLN n 1 52 VAL n 1 53 LYS n 1 54 GLY n 1 55 TYR n 1 56 SER n 1 57 TYR n 1 58 THR n 1 59 ASP n 1 60 ALA n 1 61 ASN n 1 62 ILE n 1 63 ASN n 1 64 LYS n 1 65 ASN n 1 66 VAL n 1 67 LYS n 1 68 TRP n 1 69 ASP n 1 70 GLU n 1 71 ASP n 1 72 SER n 1 73 MET n 1 74 SER n 1 75 GLU n 1 76 TYR n 1 77 LEU n 1 78 THR n 1 79 ASN n 1 80 PRO n 1 81 M3L n 1 82 LYS n 1 83 TYR n 1 84 ILE n 1 85 PRO n 1 86 GLY n 1 87 THR n 1 88 LYS n 1 89 MET n 1 90 ALA n 1 91 PHE n 1 92 ALA n 1 93 GLY n 1 94 LEU n 1 95 LYS n 1 96 LYS n 1 97 GLU n 1 98 LYS n 1 99 ASP n 1 100 ARG n 1 101 ASN n 1 102 ASP n 1 103 LEU n 1 104 ILE n 1 105 THR n 1 106 TYR n 1 107 MET n 1 108 THR n 1 109 LYS n 1 110 ALA n 1 111 ALA n 1 112 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CYC7_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00045 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MAKESTGFKPGSAKKGATLFKTRCQQCHTIEEGGPNKVGPNLHGIFGRHSGQVKGYSYTDANINKNVKWDEDSMSEYLTN PKKYIPGTKMAFAGLKKEKDRNDLITYMTKAAK ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YEA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 112 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00045 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 113 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -9 _struct_ref_seq.pdbx_auth_seq_align_end 103 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YEA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.84 _exptl_crystal.density_percent_sol 33.19 _exptl_crystal.description ? # _refine.entry_id 1YEA _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1900000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 871 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 980 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.020 0.020 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.041 0.030 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.050 0.045 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.68 1.50 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 2.52 2.50 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 2.41 2.00 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 3.59 3.00 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.016 0.020 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.205 0.140 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.213 0.250 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.202 0.250 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd 0.249 0.250 ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 2.4 2.5 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 25.7 20.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor 14.5 15.0 ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1YEA _struct.title 'STRUCTURE DETERMINATION AND ANALYSIS OF YEAST ISO-2-CYTOCHROME C AND A COMPOSITE MUTANT PROTEIN' _struct.pdbx_descriptor 'CYTOCHROME C (ISO-2, REDUCED STATE)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YEA _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 SER A 11 ? CYS A 23 ? SER A 2 CYS A 14 1 ? 13 HELX_P HELX_P2 H2 THR A 58 ? ASN A 65 ? THR A 49 ASN A 56 1 ? 8 HELX_P HELX_P3 H3 ASP A 69 ? ASN A 79 ? ASP A 60 ASN A 70 1 ? 11 HELX_P HELX_P4 H4 ASN A 79 ? ILE A 84 ? ASN A 70 ILE A 75 1 ? 6 HELX_P HELX_P5 H5 LYS A 96 ? LYS A 112 ? LYS A 87 LYS A 103 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A CYS 23 SG ? ? ? 1_555 C HEC . CAB ? ? A CYS 14 A HEC 104 1_555 ? ? ? ? ? ? ? 1.732 ? ? covale2 covale none ? A CYS 26 SG ? ? ? 1_555 C HEC . CAC ? ? A CYS 17 A HEC 104 1_555 ? ? ? ? ? ? ? 1.847 ? ? covale3 covale both ? A PRO 80 C ? ? ? 1_555 A M3L 81 N ? ? A PRO 71 A M3L 72 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A M3L 81 C ? ? ? 1_555 A LYS 82 N ? ? A M3L 72 A LYS 73 1_555 ? ? ? ? ? ? ? 1.326 ? ? metalc1 metalc ? ? A HIS 27 NE2 ? ? ? 1_555 C HEC . FE ? ? A HIS 18 A HEC 104 1_555 ? ? ? ? ? ? ? 1.863 ? ? metalc2 metalc ? ? A MET 89 SD ? ? ? 1_555 C HEC . FE ? ? A MET 80 A HEC 104 1_555 ? ? ? ? ? ? ? 2.424 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 105 ? 8 'BINDING SITE FOR RESIDUE SO4 A 105' AC2 Software A HEC 104 ? 21 'BINDING SITE FOR RESIDUE HEC A 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 GLY A 10 ? GLY A 1 . ? 1_555 ? 2 AC1 8 SER A 11 ? SER A 2 . ? 1_555 ? 3 AC1 8 ALA A 12 ? ALA A 3 . ? 1_555 ? 4 AC1 8 LYS A 13 ? LYS A 4 . ? 1_555 ? 5 AC1 8 LYS A 20 ? LYS A 11 . ? 7_465 ? 6 AC1 8 SER A 56 ? SER A 47 . ? 3_554 ? 7 AC1 8 HOH D . ? HOH A 120 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 128 . ? 1_555 ? 9 AC2 21 ARG A 22 ? ARG A 13 . ? 1_555 ? 10 AC2 21 CYS A 23 ? CYS A 14 . ? 1_555 ? 11 AC2 21 CYS A 26 ? CYS A 17 . ? 1_555 ? 12 AC2 21 HIS A 27 ? HIS A 18 . ? 1_555 ? 13 AC2 21 GLY A 32 ? GLY A 23 . ? 6_465 ? 14 AC2 21 SER A 49 ? SER A 40 . ? 1_555 ? 15 AC2 21 GLY A 50 ? GLY A 41 . ? 1_555 ? 16 AC2 21 TYR A 55 ? TYR A 46 . ? 1_555 ? 17 AC2 21 TYR A 57 ? TYR A 48 . ? 1_555 ? 18 AC2 21 THR A 58 ? THR A 49 . ? 1_555 ? 19 AC2 21 ASN A 61 ? ASN A 52 . ? 1_555 ? 20 AC2 21 TRP A 68 ? TRP A 59 . ? 1_555 ? 21 AC2 21 TYR A 76 ? TYR A 67 . ? 1_555 ? 22 AC2 21 THR A 87 ? THR A 78 . ? 1_555 ? 23 AC2 21 LYS A 88 ? LYS A 79 . ? 1_555 ? 24 AC2 21 MET A 89 ? MET A 80 . ? 1_555 ? 25 AC2 21 ALA A 90 ? ALA A 81 . ? 1_555 ? 26 AC2 21 PHE A 91 ? PHE A 82 . ? 1_555 ? 27 AC2 21 MET A 107 ? MET A 98 . ? 1_555 ? 28 AC2 21 HOH D . ? HOH A 118 . ? 1_555 ? 29 AC2 21 HOH D . ? HOH A 131 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YEA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YEA _atom_sites.fract_transf_matrix[1][1] 0.027442 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027442 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007254 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'RESIDUE LYS 72 AND TML 72 FORM EPSILON-N-TRIMETHYLLYSINE. SEE REMARK 7.' # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -9 -9 ALA ALA A . n A 1 2 LYS 2 -8 -8 LYS LYS A . n A 1 3 GLU 3 -7 -7 GLU GLU A . n A 1 4 SER 4 -6 -6 SER SER A . n A 1 5 THR 5 -5 -5 THR THR A . n A 1 6 GLY 6 -4 -4 GLY GLY A . n A 1 7 PHE 7 -3 -3 PHE PHE A . n A 1 8 LYS 8 -2 -2 LYS LYS A . n A 1 9 PRO 9 -1 -1 PRO PRO A . n A 1 10 GLY 10 1 1 GLY GLY A . n A 1 11 SER 11 2 2 SER SER A . n A 1 12 ALA 12 3 3 ALA ALA A . n A 1 13 LYS 13 4 4 LYS LYS A . n A 1 14 LYS 14 5 5 LYS LYS A . n A 1 15 GLY 15 6 6 GLY GLY A . n A 1 16 ALA 16 7 7 ALA ALA A . n A 1 17 THR 17 8 8 THR THR A . n A 1 18 LEU 18 9 9 LEU LEU A . n A 1 19 PHE 19 10 10 PHE PHE A . n A 1 20 LYS 20 11 11 LYS LYS A . n A 1 21 THR 21 12 12 THR THR A . n A 1 22 ARG 22 13 13 ARG ARG A . n A 1 23 CYS 23 14 14 CYS CYS A . n A 1 24 GLN 24 15 15 GLN GLN A . n A 1 25 GLN 25 16 16 GLN GLN A . n A 1 26 CYS 26 17 17 CYS CYS A . n A 1 27 HIS 27 18 18 HIS HIS A . n A 1 28 THR 28 19 19 THR THR A . n A 1 29 ILE 29 20 20 ILE ILE A . n A 1 30 GLU 30 21 21 GLU GLU A . n A 1 31 GLU 31 22 22 GLU GLU A . n A 1 32 GLY 32 23 23 GLY GLY A . n A 1 33 GLY 33 24 24 GLY GLY A . n A 1 34 PRO 34 25 25 PRO PRO A . n A 1 35 ASN 35 26 26 ASN ASN A . n A 1 36 LYS 36 27 27 LYS LYS A . n A 1 37 VAL 37 28 28 VAL VAL A . n A 1 38 GLY 38 29 29 GLY GLY A . n A 1 39 PRO 39 30 30 PRO PRO A . n A 1 40 ASN 40 31 31 ASN ASN A . n A 1 41 LEU 41 32 32 LEU LEU A . n A 1 42 HIS 42 33 33 HIS HIS A . n A 1 43 GLY 43 34 34 GLY GLY A . n A 1 44 ILE 44 35 35 ILE ILE A . n A 1 45 PHE 45 36 36 PHE PHE A . n A 1 46 GLY 46 37 37 GLY GLY A . n A 1 47 ARG 47 38 38 ARG ARG A . n A 1 48 HIS 48 39 39 HIS HIS A . n A 1 49 SER 49 40 40 SER SER A . n A 1 50 GLY 50 41 41 GLY GLY A . n A 1 51 GLN 51 42 42 GLN GLN A . n A 1 52 VAL 52 43 43 VAL VAL A . n A 1 53 LYS 53 44 44 LYS LYS A . n A 1 54 GLY 54 45 45 GLY GLY A . n A 1 55 TYR 55 46 46 TYR TYR A . n A 1 56 SER 56 47 47 SER SER A . n A 1 57 TYR 57 48 48 TYR TYR A . n A 1 58 THR 58 49 49 THR THR A . n A 1 59 ASP 59 50 50 ASP ASP A . n A 1 60 ALA 60 51 51 ALA ALA A . n A 1 61 ASN 61 52 52 ASN ASN A . n A 1 62 ILE 62 53 53 ILE ILE A . n A 1 63 ASN 63 54 54 ASN ASN A . n A 1 64 LYS 64 55 55 LYS LYS A . n A 1 65 ASN 65 56 56 ASN ASN A . n A 1 66 VAL 66 57 57 VAL VAL A . n A 1 67 LYS 67 58 58 LYS LYS A . n A 1 68 TRP 68 59 59 TRP TRP A . n A 1 69 ASP 69 60 60 ASP ASP A . n A 1 70 GLU 70 61 61 GLU GLU A . n A 1 71 ASP 71 62 62 ASP ASP A . n A 1 72 SER 72 63 63 SER SER A . n A 1 73 MET 73 64 64 MET MET A . n A 1 74 SER 74 65 65 SER SER A . n A 1 75 GLU 75 66 66 GLU GLU A . n A 1 76 TYR 76 67 67 TYR TYR A . n A 1 77 LEU 77 68 68 LEU LEU A . n A 1 78 THR 78 69 69 THR THR A . n A 1 79 ASN 79 70 70 ASN ASN A . n A 1 80 PRO 80 71 71 PRO PRO A . n A 1 81 M3L 81 72 72 M3L LYS A . n A 1 82 LYS 82 73 73 LYS LYS A . n A 1 83 TYR 83 74 74 TYR TYR A . n A 1 84 ILE 84 75 75 ILE ILE A . n A 1 85 PRO 85 76 76 PRO PRO A . n A 1 86 GLY 86 77 77 GLY GLY A . n A 1 87 THR 87 78 78 THR THR A . n A 1 88 LYS 88 79 79 LYS LYS A . n A 1 89 MET 89 80 80 MET MET A . n A 1 90 ALA 90 81 81 ALA ALA A . n A 1 91 PHE 91 82 82 PHE PHE A . n A 1 92 ALA 92 83 83 ALA ALA A . n A 1 93 GLY 93 84 84 GLY GLY A . n A 1 94 LEU 94 85 85 LEU LEU A . n A 1 95 LYS 95 86 86 LYS LYS A . n A 1 96 LYS 96 87 87 LYS LYS A . n A 1 97 GLU 97 88 88 GLU GLU A . n A 1 98 LYS 98 89 89 LYS LYS A . n A 1 99 ASP 99 90 90 ASP ASP A . n A 1 100 ARG 100 91 91 ARG ARG A . n A 1 101 ASN 101 92 92 ASN ASN A . n A 1 102 ASP 102 93 93 ASP ASP A . n A 1 103 LEU 103 94 94 LEU LEU A . n A 1 104 ILE 104 95 95 ILE ILE A . n A 1 105 THR 105 96 96 THR THR A . n A 1 106 TYR 106 97 97 TYR TYR A . n A 1 107 MET 107 98 98 MET MET A . n A 1 108 THR 108 99 99 THR THR A . n A 1 109 LYS 109 100 100 LYS LYS A . n A 1 110 ALA 110 101 101 ALA ALA A . n A 1 111 ALA 111 102 102 ALA ALA A . n A 1 112 LYS 112 103 103 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 105 105 SO4 SO4 A . C 3 HEC 1 104 104 HEC HEM A . D 4 HOH 1 106 106 HOH HOH A . D 4 HOH 2 107 107 HOH HOH A . D 4 HOH 3 108 108 HOH HOH A . D 4 HOH 4 109 109 HOH HOH A . D 4 HOH 5 110 110 HOH HOH A . D 4 HOH 6 111 111 HOH HOH A . D 4 HOH 7 112 112 HOH HOH A . D 4 HOH 8 113 113 HOH HOH A . D 4 HOH 9 114 114 HOH HOH A . D 4 HOH 10 115 115 HOH HOH A . D 4 HOH 11 116 116 HOH HOH A . D 4 HOH 12 117 117 HOH HOH A . D 4 HOH 13 118 118 HOH HOH A . D 4 HOH 14 119 119 HOH HOH A . D 4 HOH 15 120 120 HOH HOH A . D 4 HOH 16 121 121 HOH HOH A . D 4 HOH 17 122 122 HOH HOH A . D 4 HOH 18 123 123 HOH HOH A . D 4 HOH 19 124 124 HOH HOH A . D 4 HOH 20 125 125 HOH HOH A . D 4 HOH 21 126 126 HOH HOH A . D 4 HOH 22 127 127 HOH HOH A . D 4 HOH 23 128 128 HOH HOH A . D 4 HOH 24 129 129 HOH HOH A . D 4 HOH 25 130 130 HOH HOH A . D 4 HOH 26 131 131 HOH HOH A . D 4 HOH 27 132 132 HOH HOH A . D 4 HOH 28 133 133 HOH HOH A . D 4 HOH 29 134 134 HOH HOH A . D 4 HOH 30 135 135 HOH HOH A . D 4 HOH 31 136 136 HOH HOH A . D 4 HOH 32 137 137 HOH HOH A . D 4 HOH 33 138 138 HOH HOH A . D 4 HOH 34 139 139 HOH HOH A . D 4 HOH 35 140 140 HOH HOH A . D 4 HOH 36 141 141 HOH HOH A . D 4 HOH 37 142 142 HOH HOH A . D 4 HOH 38 143 143 HOH HOH A . D 4 HOH 39 144 144 HOH HOH A . D 4 HOH 40 145 145 HOH HOH A . D 4 HOH 41 146 146 HOH HOH A . D 4 HOH 42 147 147 HOH HOH A . D 4 HOH 43 148 148 HOH HOH A . D 4 HOH 44 149 149 HOH HOH A . D 4 HOH 45 150 150 HOH HOH A . D 4 HOH 46 151 151 HOH HOH A . D 4 HOH 47 152 152 HOH HOH A . D 4 HOH 48 153 153 HOH HOH A . D 4 HOH 49 154 154 HOH HOH A . D 4 HOH 50 155 155 HOH HOH A . D 4 HOH 51 156 156 HOH HOH A . D 4 HOH 52 157 157 HOH HOH A . D 4 HOH 53 158 158 HOH HOH A . D 4 HOH 54 159 159 HOH HOH A . D 4 HOH 55 160 160 HOH HOH A . D 4 HOH 56 161 161 HOH HOH A . D 4 HOH 57 162 162 HOH HOH A . D 4 HOH 58 163 163 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id M3L _pdbx_struct_mod_residue.label_seq_id 81 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id M3L _pdbx_struct_mod_residue.auth_seq_id 72 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-TRIMETHYLLYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 27 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 NA ? C HEC . ? A HEC 104 ? 1_555 93.4 ? 2 NE2 ? A HIS 27 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 NB ? C HEC . ? A HEC 104 ? 1_555 89.0 ? 3 NA ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 NB ? C HEC . ? A HEC 104 ? 1_555 90.7 ? 4 NE2 ? A HIS 27 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 NC ? C HEC . ? A HEC 104 ? 1_555 91.2 ? 5 NA ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 NC ? C HEC . ? A HEC 104 ? 1_555 175.4 ? 6 NB ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 NC ? C HEC . ? A HEC 104 ? 1_555 88.7 ? 7 NE2 ? A HIS 27 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 ND ? C HEC . ? A HEC 104 ? 1_555 94.9 ? 8 NA ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 ND ? C HEC . ? A HEC 104 ? 1_555 87.7 ? 9 NB ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 ND ? C HEC . ? A HEC 104 ? 1_555 175.8 ? 10 NC ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 ND ? C HEC . ? A HEC 104 ? 1_555 92.6 ? 11 NE2 ? A HIS 27 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 SD ? A MET 89 ? A MET 80 ? 1_555 175.5 ? 12 NA ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 SD ? A MET 89 ? A MET 80 ? 1_555 86.5 ? 13 NB ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 SD ? A MET 89 ? A MET 80 ? 1_555 86.6 ? 14 NC ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 SD ? A MET 89 ? A MET 80 ? 1_555 88.9 ? 15 ND ? C HEC . ? A HEC 104 ? 1_555 FE ? C HEC . ? A HEC 104 ? 1_555 SD ? A MET 89 ? A MET 80 ? 1_555 89.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 2008-03-21 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 2 0 2021-03-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other 5 5 'Structure model' 'Atomic model' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Non-polymer description' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type 4 5 'Structure model' atom_site 5 5 'Structure model' chem_comp 6 5 'Structure model' entity 7 5 'Structure model' pdbx_entity_nonpoly 8 5 'Structure model' pdbx_nonpoly_scheme 9 5 'Structure model' pdbx_struct_conn_angle 10 5 'Structure model' struct_conn 11 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.process_site' 2 5 'Structure model' '_atom_site.B_iso_or_equiv' 3 5 'Structure model' '_atom_site.Cartn_x' 4 5 'Structure model' '_atom_site.Cartn_y' 5 5 'Structure model' '_atom_site.Cartn_z' 6 5 'Structure model' '_atom_site.auth_atom_id' 7 5 'Structure model' '_atom_site.auth_comp_id' 8 5 'Structure model' '_atom_site.label_atom_id' 9 5 'Structure model' '_atom_site.label_comp_id' 10 5 'Structure model' '_atom_site.type_symbol' 11 5 'Structure model' '_chem_comp.formula' 12 5 'Structure model' '_chem_comp.formula_weight' 13 5 'Structure model' '_chem_comp.id' 14 5 'Structure model' '_chem_comp.name' 15 5 'Structure model' '_chem_comp.pdbx_synonyms' 16 5 'Structure model' '_entity.formula_weight' 17 5 'Structure model' '_entity.pdbx_description' 18 5 'Structure model' '_pdbx_entity_nonpoly.comp_id' 19 5 'Structure model' '_pdbx_entity_nonpoly.name' 20 5 'Structure model' '_pdbx_nonpoly_scheme.mon_id' 21 5 'Structure model' '_pdbx_nonpoly_scheme.pdb_mon_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 28 5 'Structure model' '_struct_conn.conn_type_id' 29 5 'Structure model' '_struct_conn.id' 30 5 'Structure model' '_struct_conn.pdbx_dist_value' 31 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 32 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 43 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 44 5 'Structure model' '_struct_site.details' 45 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 46 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 47 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A PHE 10 ? ? CA A PHE 10 ? ? CB A PHE 10 ? ? 125.11 110.60 14.51 1.80 N 2 1 O A PHE 10 ? ? C A PHE 10 ? ? N A LYS 11 ? ? 132.70 122.70 10.00 1.60 Y 3 1 NE A ARG 13 ? ? CZ A ARG 13 ? ? NH1 A ARG 13 ? ? 123.64 120.30 3.34 0.50 N 4 1 CA A HIS 18 ? ? CB A HIS 18 ? ? CG A HIS 18 ? ? 125.88 113.60 12.28 1.70 N 5 1 CA A GLU 21 ? ? CB A GLU 21 ? ? CG A GLU 21 ? ? 134.40 113.40 21.00 2.20 N 6 1 NE A ARG 38 ? ? CZ A ARG 38 ? ? NH1 A ARG 38 ? ? 128.29 120.30 7.99 0.50 N 7 1 NE A ARG 38 ? ? CZ A ARG 38 ? ? NH2 A ARG 38 ? ? 116.67 120.30 -3.63 0.50 N 8 1 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 117.29 121.00 -3.71 0.60 N 9 1 CB A SER 47 ? ? CA A SER 47 ? ? C A SER 47 ? ? 122.16 110.10 12.06 1.90 N 10 1 N A LYS 58 ? ? CA A LYS 58 ? ? CB A LYS 58 ? ? 122.31 110.60 11.71 1.80 N 11 1 CA A GLU 66 ? ? CB A GLU 66 ? ? CG A GLU 66 ? ? 129.90 113.40 16.50 2.20 N 12 1 OE1 A GLU 66 ? ? CD A GLU 66 ? ? OE2 A GLU 66 ? ? 115.55 123.30 -7.75 1.20 N 13 1 CA A LYS 79 ? ? CB A LYS 79 ? ? CG A LYS 79 ? ? 126.80 113.40 13.40 2.20 N 14 1 CA A MET 80 ? ? CB A MET 80 ? ? CG A MET 80 ? ? 103.05 113.30 -10.25 1.70 N 15 1 CD A ARG 91 ? ? NE A ARG 91 ? ? CZ A ARG 91 ? ? 132.70 123.60 9.10 1.40 N 16 1 NE A ARG 91 ? ? CZ A ARG 91 ? ? NH1 A ARG 91 ? ? 125.67 120.30 5.37 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A -3 ? ? -37.75 126.86 2 1 LYS A 27 ? ? -158.08 -137.59 3 1 ASP A 60 ? ? -124.14 -168.74 4 1 ASN A 70 ? ? -170.87 89.59 5 1 PHE A 82 ? ? -172.72 128.57 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'HEME C' HEC 4 water HOH #