HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-DEC-04 1YEZ TITLE SOLUTION STRUCTURE OF THE CONSERVED PROTEIN FROM THE GENE LOCUS MM1357 TITLE 2 OF METHANOSARCINA MAZEI. NORTHEAST STRUCTURAL GENOMICS TARGET MAR30. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MM1357; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; SOURCE 3 ORGANISM_TAXID: 192952; SOURCE 4 STRAIN: GO1; SOURCE 5 GENE: LOCUS MM1357; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21MGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: MAR30-21.1 KEYWDS MAR30, AUTOSTRUCTURE, NORTHEAST STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR P.ROSSI,J.M.ARAMINI,G.V.T.SWAPNA,Y.P.HUANG,R.XIAO,C.K.HO,L.C.MA, AUTHOR 2 T.B.ACTON,G.T.MONTELIONE,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (NESG) REVDAT 5 01-MAY-24 1YEZ 1 REMARK REVDAT 4 13-JUL-11 1YEZ 1 VERSN REVDAT 3 24-FEB-09 1YEZ 1 VERSN REVDAT 2 05-APR-05 1YEZ 1 JRNL COMPND TITLE REVDAT 1 22-FEB-05 1YEZ 0 JRNL AUTH P.ROSSI,J.M.ARAMINI,G.V.T.SWAPNA,Y.P.HUANG,R.XIAO,C.K.HO, JRNL AUTH 2 L.C.MA,T.B.ACTON,G.T.MONTELIONE JRNL TITL SOLUTION STRUCTURE OF THE CONSERVED PROTEIN FROM THE GENE JRNL TITL 2 LOCUS MM1357 OF METHANOSARCINA MAZEI. NORTHEAST STRUCTURAL JRNL TITL 3 GENOMICS TARGET MAR30. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AUTOSTRUCTURE 2.1.0 REMARK 3 AUTHORS : HUANG,MONTELIONE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YEZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000031439. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 MM NACL REMARK 210 PRESSURE : ATMOSPHERIC ATM REMARK 210 SAMPLE CONTENTS : 2MM MAR30 U-13C,15N, 0.02% NAN3, REMARK 210 10MM DTT, 5MM CACL2, 100MM NACL, REMARK 210 20MM MES, 5% D2O/95% H2O; 0.56MM REMARK 210 MAR30 U-13C,15N, 0.02% NAN3, REMARK 210 10MM DTT, 5MM CACL2, 100MM NACL, REMARK 210 20MM MES, 100% D2O; 0.78MM MAR30 REMARK 210 U-15N,5% 13C 0.02% NAN3, 10MM REMARK 210 DTT, 5MM CACL2, 100MM NACL, 20MM REMARK 210 MES, 5% D2O/95% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; HI-RES CH-HSQC, REMARK 210 HCCH-COSY; HI-RES CH-HSQC REMARK 210 (STEREO V AND L METH.), HNHA; TR REMARK 210 EXP. BACKBONE, TOCSYS, HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, XWINNMR 3.5, NMRPIPE REMARK 210 2.1, SPARKY 3.91, AUTOASSIGN 1.14 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 56 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: REMARK 210 CS ASSIGN.: BACKBONE AUTOASSIGN, SIDECHAIN HCCH-COSY AND TOCSYS. REMARK 210 AUTOSTRUCTURE FOR NOESY ASSIGN. HYPER DIHEDRAL, DYANA, XPLOR(NIH), REMARK 210 AND CNS FORCE-FIELD FOR SIMULATED ANNEALING AND RPF SCORE REMARK 210 CALCULATION. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 8 94.68 -68.12 REMARK 500 1 ARG A 26 92.94 -64.62 REMARK 500 1 GLN A 27 -27.11 166.27 REMARK 500 1 GLU A 35 12.89 57.56 REMARK 500 1 VAL A 54 97.24 -69.29 REMARK 500 2 SER A 6 13.07 57.81 REMARK 500 2 ARG A 7 -57.68 66.36 REMARK 500 2 ARG A 26 85.63 57.88 REMARK 500 2 GLN A 27 -24.85 171.56 REMARK 500 2 VAL A 54 99.13 -69.25 REMARK 500 3 PHE A 2 -77.84 176.37 REMARK 500 3 ARG A 3 22.92 -175.12 REMARK 500 3 GLU A 5 -170.47 67.61 REMARK 500 3 SER A 8 33.86 -82.39 REMARK 500 3 VAL A 54 98.40 -68.94 REMARK 500 4 ARG A 3 -165.87 66.66 REMARK 500 4 SER A 6 14.37 59.77 REMARK 500 4 ARG A 7 -76.97 62.60 REMARK 500 4 SER A 8 -161.31 66.51 REMARK 500 4 VAL A 9 70.65 35.33 REMARK 500 4 GLN A 27 -36.06 -158.60 REMARK 500 5 SER A 6 -51.49 -137.88 REMARK 500 5 ARG A 7 120.25 64.55 REMARK 500 5 VAL A 9 170.26 60.39 REMARK 500 5 PRO A 59 -1.46 -58.89 REMARK 500 6 GLU A 4 71.00 61.60 REMARK 500 6 GLU A 5 -156.71 42.46 REMARK 500 6 SER A 6 -55.51 -133.79 REMARK 500 6 ARG A 7 67.80 -175.80 REMARK 500 7 ARG A 3 152.45 73.67 REMARK 500 7 ARG A 7 -36.97 67.38 REMARK 500 7 SER A 8 70.79 62.20 REMARK 500 7 ALA A 25 -150.79 -98.55 REMARK 500 7 GLN A 27 -74.84 72.65 REMARK 500 8 ARG A 3 -53.87 -150.07 REMARK 500 8 GLU A 4 -19.63 177.96 REMARK 500 8 GLU A 5 -158.72 74.30 REMARK 500 8 ARG A 7 -159.37 -88.92 REMARK 500 8 PRO A 59 11.00 -68.13 REMARK 500 9 PHE A 2 95.98 64.86 REMARK 500 9 ARG A 3 -9.69 71.89 REMARK 500 9 GLU A 5 -154.45 56.44 REMARK 500 9 SER A 8 -20.85 66.62 REMARK 500 10 PHE A 2 -169.28 62.74 REMARK 500 10 ARG A 3 -35.99 -156.54 REMARK 500 10 GLU A 4 96.52 75.18 REMARK 500 10 GLU A 5 -163.47 -75.70 REMARK 500 10 SER A 6 76.64 73.62 REMARK 500 10 SER A 8 96.55 -67.93 REMARK 500 10 VAL A 9 115.95 69.97 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MAR30 RELATED DB: TARGETDB DBREF 1YEZ A 1 68 UNP Q8PX65 Q8PX65_METMA 1 68 SEQRES 1 A 68 MET PHE ARG GLU GLU SER ARG SER VAL PRO VAL GLU GLU SEQRES 2 A 68 GLY GLU VAL TYR ASP VAL THR ILE GLN ASP ILE ALA ARG SEQRES 3 A 68 GLN GLY ASP GLY ILE ALA ARG ILE GLU GLY PHE VAL ILE SEQRES 4 A 68 PHE VAL PRO GLY THR LYS VAL GLY ASP GLU VAL ARG ILE SEQRES 5 A 68 LYS VAL GLU ARG VAL LEU PRO LYS PHE ALA PHE ALA SER SEQRES 6 A 68 VAL VAL GLU SHEET 1 A 6 GLU A 15 THR A 20 0 SHEET 2 A 6 GLU A 49 VAL A 57 -1 O ILE A 52 N TYR A 17 SHEET 3 A 6 ALA A 62 VAL A 66 -1 O SER A 65 N LYS A 53 SHEET 4 A 6 PHE A 37 PRO A 42 1 N PHE A 40 O ALA A 62 SHEET 5 A 6 ASP A 29 ILE A 34 -1 N ALA A 32 O ILE A 39 SHEET 6 A 6 ASP A 23 ILE A 24 -1 N ASP A 23 O ILE A 31 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1