data_1YF5 # _entry.id 1YF5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YF5 pdb_00001yf5 10.2210/pdb1yf5/pdb RCSB RCSB031445 ? ? WWPDB D_1000031445 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1w97 _pdbx_database_related.details 'initial structure' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YF5 _pdbx_database_status.recvd_initial_deposition_date 2004-12-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abendroth, J.' 1 'Murphy, P.' 2 'Mushtaq, A.' 3 'Sandkvist, M.' 4 'Bagdasarian, M.' 5 'Hol, W.G.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;The X-ray Structure of the Type II Secretion System Complex Formed by the N-terminal Domain of EpsE and the Cytoplasmic Domain of EpsL of Vibrio cholerae. ; J.Mol.Biol. 348 845 855 2005 JMOBAK UK 0022-2836 0070 ? 15843017 10.1016/j.jmb.2005.02.061 1 ;The Structure of the Cytoplasmic Domain of Epsl, an Inner Membrane Component of the Type II Secretio System of Vibrio Cholerae: An Unusual Member of the Actin-Like ATPase Superfamily ; J.Mol.Biol. 344 619 633 2004 JMOBAK UK 0022-2836 0070 ? 15533433 10.1016/j.jmb.2004.09.062 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abendroth, J.' 1 ? primary 'Murphy, P.' 2 ? primary 'Sandkvist, M.' 3 ? primary 'Bagdasarian, M.' 4 ? primary 'Hol, W.G.' 5 ? 1 'Abendroth, J.' 6 ? 1 'Bagdasarian, M.' 7 ? 1 'Sandkvist, M.' 8 ? 1 'Hol, W.G.' 9 ? # _cell.entry_id 1YF5 _cell.length_a 61.006 _cell.length_b 88.707 _cell.length_c 55.371 _cell.angle_alpha 90.00 _cell.angle_beta 106.01 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YF5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'General secretion pathway protein L' 28528.854 1 ? ? ? ? 2 water nat water 18.015 9 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cholera toxin secretion protein epsL' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MEGSVSEFLTVRLSSQKEADIPWLVWSAEQQEVIASGQVAGWEALHEIESYADQRSVVVLLAASDLILTSVEIPPGASRQ LEN(MSE)LPYLLEDEIAQDVEDVHFCVLSKGRETADVVGVDRLWLRACLDHLKACGFDVKRVLPDVLAIPRPEHGLAAL QLGDEWLVRKSTTQG(MSE)AVDAQWLSLLAASDWVQNEGEYLPLQALTPLPELSLAETQEWRYEPSGLV(MSE)QLLTQ EALTSKFNLLTGSFKLKSLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MEGSVSEFLTVRLSSQKEADIPWLVWSAEQQEVIASGQVAGWEALHEIESYADQRSVVVLLAASDLILTSVEIPPGASRQ LENMLPYLLEDEIAQDVEDVHFCVLSKGRETADVVGVDRLWLRACLDHLKACGFDVKRVLPDVLAIPRPEHGLAALQLGD EWLVRKSTTQGMAVDAQWLSLLAASDWVQNEGEYLPLQALTPLPELSLAETQEWRYEPSGLVMQLLTQEALTSKFNLLTG SFKLKSLEHHHHHH ; _entity_poly.pdbx_strand_id L _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 GLY n 1 4 SER n 1 5 VAL n 1 6 SER n 1 7 GLU n 1 8 PHE n 1 9 LEU n 1 10 THR n 1 11 VAL n 1 12 ARG n 1 13 LEU n 1 14 SER n 1 15 SER n 1 16 GLN n 1 17 LYS n 1 18 GLU n 1 19 ALA n 1 20 ASP n 1 21 ILE n 1 22 PRO n 1 23 TRP n 1 24 LEU n 1 25 VAL n 1 26 TRP n 1 27 SER n 1 28 ALA n 1 29 GLU n 1 30 GLN n 1 31 GLN n 1 32 GLU n 1 33 VAL n 1 34 ILE n 1 35 ALA n 1 36 SER n 1 37 GLY n 1 38 GLN n 1 39 VAL n 1 40 ALA n 1 41 GLY n 1 42 TRP n 1 43 GLU n 1 44 ALA n 1 45 LEU n 1 46 HIS n 1 47 GLU n 1 48 ILE n 1 49 GLU n 1 50 SER n 1 51 TYR n 1 52 ALA n 1 53 ASP n 1 54 GLN n 1 55 ARG n 1 56 SER n 1 57 VAL n 1 58 VAL n 1 59 VAL n 1 60 LEU n 1 61 LEU n 1 62 ALA n 1 63 ALA n 1 64 SER n 1 65 ASP n 1 66 LEU n 1 67 ILE n 1 68 LEU n 1 69 THR n 1 70 SER n 1 71 VAL n 1 72 GLU n 1 73 ILE n 1 74 PRO n 1 75 PRO n 1 76 GLY n 1 77 ALA n 1 78 SER n 1 79 ARG n 1 80 GLN n 1 81 LEU n 1 82 GLU n 1 83 ASN n 1 84 MSE n 1 85 LEU n 1 86 PRO n 1 87 TYR n 1 88 LEU n 1 89 LEU n 1 90 GLU n 1 91 ASP n 1 92 GLU n 1 93 ILE n 1 94 ALA n 1 95 GLN n 1 96 ASP n 1 97 VAL n 1 98 GLU n 1 99 ASP n 1 100 VAL n 1 101 HIS n 1 102 PHE n 1 103 CYS n 1 104 VAL n 1 105 LEU n 1 106 SER n 1 107 LYS n 1 108 GLY n 1 109 ARG n 1 110 GLU n 1 111 THR n 1 112 ALA n 1 113 ASP n 1 114 VAL n 1 115 VAL n 1 116 GLY n 1 117 VAL n 1 118 ASP n 1 119 ARG n 1 120 LEU n 1 121 TRP n 1 122 LEU n 1 123 ARG n 1 124 ALA n 1 125 CYS n 1 126 LEU n 1 127 ASP n 1 128 HIS n 1 129 LEU n 1 130 LYS n 1 131 ALA n 1 132 CYS n 1 133 GLY n 1 134 PHE n 1 135 ASP n 1 136 VAL n 1 137 LYS n 1 138 ARG n 1 139 VAL n 1 140 LEU n 1 141 PRO n 1 142 ASP n 1 143 VAL n 1 144 LEU n 1 145 ALA n 1 146 ILE n 1 147 PRO n 1 148 ARG n 1 149 PRO n 1 150 GLU n 1 151 HIS n 1 152 GLY n 1 153 LEU n 1 154 ALA n 1 155 ALA n 1 156 LEU n 1 157 GLN n 1 158 LEU n 1 159 GLY n 1 160 ASP n 1 161 GLU n 1 162 TRP n 1 163 LEU n 1 164 VAL n 1 165 ARG n 1 166 LYS n 1 167 SER n 1 168 THR n 1 169 THR n 1 170 GLN n 1 171 GLY n 1 172 MSE n 1 173 ALA n 1 174 VAL n 1 175 ASP n 1 176 ALA n 1 177 GLN n 1 178 TRP n 1 179 LEU n 1 180 SER n 1 181 LEU n 1 182 LEU n 1 183 ALA n 1 184 ALA n 1 185 SER n 1 186 ASP n 1 187 TRP n 1 188 VAL n 1 189 GLN n 1 190 ASN n 1 191 GLU n 1 192 GLY n 1 193 GLU n 1 194 TYR n 1 195 LEU n 1 196 PRO n 1 197 LEU n 1 198 GLN n 1 199 ALA n 1 200 LEU n 1 201 THR n 1 202 PRO n 1 203 LEU n 1 204 PRO n 1 205 GLU n 1 206 LEU n 1 207 SER n 1 208 LEU n 1 209 ALA n 1 210 GLU n 1 211 THR n 1 212 GLN n 1 213 GLU n 1 214 TRP n 1 215 ARG n 1 216 TYR n 1 217 GLU n 1 218 PRO n 1 219 SER n 1 220 GLY n 1 221 LEU n 1 222 VAL n 1 223 MSE n 1 224 GLN n 1 225 LEU n 1 226 LEU n 1 227 THR n 1 228 GLN n 1 229 GLU n 1 230 ALA n 1 231 LEU n 1 232 THR n 1 233 SER n 1 234 LYS n 1 235 PHE n 1 236 ASN n 1 237 LEU n 1 238 LEU n 1 239 THR n 1 240 GLY n 1 241 SER n 1 242 PHE n 1 243 LYS n 1 244 LEU n 1 245 LYS n 1 246 SER n 1 247 LEU n 1 248 GLU n 1 249 HIS n 1 250 HIS n 1 251 HIS n 1 252 HIS n 1 253 HIS n 1 254 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Vibrio _entity_src_gen.pdbx_gene_src_gene epsL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 666 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21gold(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type 'pET21d(+)' _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GSPL_VIBCH _struct_ref.pdbx_db_accession P45782 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEGSVSEFLTVRLSSQKEADIPWLVWSAEQQEVIASGQVAGWEALHEIESYADQRSVVVLLAASDLILTSVEIPPGASRQ LENMLPYLLEDEIAQDVEDVHFCVLSKGRETADVVGVDRLWLRACLDHLKACGFDVKRVLPDVLAIPRPEHGLAALQLGD EWLVRKSTTQGMAVDAQWLSLLAASDWVQNEGEYLPLQALTPLPELSLAETQEWRYEPSGLVMQLLTQEALTSKFNLLTG SFKLKSSW ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YF5 _struct_ref_seq.pdbx_strand_id L _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 248 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P45782 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 248 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -3 _struct_ref_seq.pdbx_auth_seq_align_end 244 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YF5 MSE L 84 ? UNP P45782 MET 84 'modified residue' 80 1 1 1YF5 MSE L 172 ? UNP P45782 MET 172 'modified residue' 168 2 1 1YF5 MSE L 223 ? UNP P45782 MET 223 'modified residue' 219 3 1 1YF5 LEU L 247 ? UNP P45782 SER 247 'cloning artifact' 243 4 1 1YF5 GLU L 248 ? UNP P45782 TRP 248 'cloning artifact' 244 5 1 1YF5 HIS L 249 ? UNP P45782 ? ? 'expression tag' 245 6 1 1YF5 HIS L 250 ? UNP P45782 ? ? 'expression tag' 246 7 1 1YF5 HIS L 251 ? UNP P45782 ? ? 'expression tag' 247 8 1 1YF5 HIS L 252 ? UNP P45782 ? ? 'expression tag' 248 9 1 1YF5 HIS L 253 ? UNP P45782 ? ? 'expression tag' 249 10 1 1YF5 HIS L 254 ? UNP P45782 ? ? 'expression tag' 250 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YF5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 51.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '15% PEG 6000, 150mM calcium acetate, 100mM tris pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2003-03-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97951 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97951 # _reflns.entry_id 1YF5 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.74 _reflns.d_resolution_low 20 _reflns.number_all 7122 _reflns.number_obs 7122 _reflns.percent_possible_obs 95.8 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.1 _reflns.B_iso_Wilson_estimate 87.4 _reflns.pdbx_redundancy 7.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.74 _reflns_shell.d_res_low 2.80 _reflns_shell.percent_possible_all 81.0 _reflns_shell.Rmerge_I_obs 0.37 _reflns_shell.pdbx_Rsym_value 0.37 _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_redundancy 5.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1YF5 _refine.ls_number_reflns_obs 6747 _refine.ls_number_reflns_all 7112 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.75 _refine.ls_percent_reflns_obs 95.96 _refine.ls_R_factor_obs 0.21553 _refine.ls_R_factor_all 0.21553 _refine.ls_R_factor_R_work 0.21299 _refine.ls_R_factor_R_free 0.26881 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 353 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.919 _refine.B_iso_mean 76.835 _refine.aniso_B[1][1] 3.83 _refine.aniso_B[2][2] -0.23 _refine.aniso_B[3][3] 1.73 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 9.68 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1w97 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.402 _refine.overall_SU_ML 0.350 _refine.overall_SU_B 42.646 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1864 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 1873 _refine_hist.d_res_high 2.75 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 1912 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.038 1.967 ? 2611 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.529 5.000 ? 239 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.163 25.116 ? 86 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.654 15.000 ? 322 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.680 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.061 0.200 ? 303 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 1439 'X-RAY DIFFRACTION' ? r_nbd_refined 0.191 0.200 ? 787 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.296 0.200 ? 1271 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.108 0.200 ? 55 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.297 0.200 ? 23 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.190 0.200 ? 3 'X-RAY DIFFRACTION' ? r_mcbond_it 0.265 1.500 ? 1216 'X-RAY DIFFRACTION' ? r_mcangle_it 0.428 2.000 ? 1919 'X-RAY DIFFRACTION' ? r_scbond_it 0.463 3.000 ? 794 'X-RAY DIFFRACTION' ? r_scangle_it 0.749 4.500 ? 691 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.750 _refine_ls_shell.d_res_low 2.896 _refine_ls_shell.number_reflns_R_work 833 _refine_ls_shell.R_factor_R_work 0.343 _refine_ls_shell.percent_reflns_obs 83.68 _refine_ls_shell.R_factor_R_free 0.346 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1YF5 _struct.title 'Cyto-Epsl: The Cytoplasmic Domain Of Epsl, An Inner Membrane Component Of The Type II Secretion System Of Vibrio Cholerae' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YF5 _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'Type II secretion, secretory protein, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ;the second half of the dimer is generated by the crystallographic two-fold: -x+2, y, -z ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 42 ? GLU A 47 ? TRP L 38 GLU L 43 5 ? 6 HELX_P HELX_P2 2 ILE A 48 ? ASP A 53 ? ILE L 44 ASP L 49 1 ? 6 HELX_P HELX_P3 3 ALA A 63 ? LEU A 66 ? ALA L 59 LEU L 62 5 ? 4 HELX_P HELX_P4 4 ALA A 77 ? ARG A 79 ? ALA L 73 ARG L 75 5 ? 3 HELX_P HELX_P5 5 GLN A 80 ? LEU A 89 ? GLN L 76 LEU L 85 1 ? 10 HELX_P HELX_P6 6 GLU A 90 ? ILE A 93 ? GLU L 86 ILE L 89 5 ? 4 HELX_P HELX_P7 7 ASP A 96 ? GLU A 98 ? ASP L 92 GLU L 94 5 ? 3 HELX_P HELX_P8 8 ARG A 119 ? CYS A 132 ? ARG L 115 CYS L 128 1 ? 14 HELX_P HELX_P9 9 VAL A 143 ? ILE A 146 ? VAL L 139 ILE L 142 5 ? 4 HELX_P HELX_P10 10 TRP A 178 ? SER A 185 ? TRP L 174 SER L 181 1 ? 8 HELX_P HELX_P11 11 LEU A 221 ? SER A 233 ? LEU L 217 SER L 229 1 ? 13 HELX_P HELX_P12 12 THR A 239 ? LYS A 243 ? THR L 235 LYS L 239 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 83 C ? ? ? 1_555 A MSE 84 N ? ? L ASN 79 L MSE 80 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A MSE 84 C ? ? ? 1_555 A LEU 85 N ? ? L MSE 80 L LEU 81 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A GLY 171 C ? ? ? 1_555 A MSE 172 N ? ? L GLY 167 L MSE 168 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 172 C ? ? ? 1_555 A ALA 173 N ? ? L MSE 168 L ALA 169 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A VAL 222 C ? ? ? 1_555 A MSE 223 N ? ? L VAL 218 L MSE 219 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale6 covale both ? A MSE 223 C ? ? ? 1_555 A GLN 224 N ? ? L MSE 219 L GLN 220 1_555 ? ? ? ? ? ? ? 1.332 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 32 ? ALA A 40 ? GLU L 28 ALA L 36 A 2 ASP A 20 ? SER A 27 ? ASP L 16 SER L 23 A 3 GLU A 7 ? LEU A 13 ? GLU L 3 LEU L 9 A 4 SER A 56 ? LEU A 61 ? SER L 52 LEU L 57 A 5 VAL A 136 ? PRO A 141 ? VAL L 132 PRO L 137 B 1 ILE A 67 ? GLU A 72 ? ILE L 63 GLU L 68 B 2 THR A 111 ? ASP A 118 ? THR L 107 ASP L 114 B 3 VAL A 100 ? LYS A 107 ? VAL L 96 LYS L 103 C 1 GLY A 171 ? ASP A 175 ? GLY L 167 ASP L 171 C 2 GLU A 161 ? ARG A 165 ? GLU L 157 ARG L 161 C 3 LEU A 153 ? LEU A 158 ? LEU L 149 LEU L 154 C 4 LEU A 197 ? ALA A 199 ? LEU L 193 ALA L 195 D 1 GLN A 189 ? ASN A 190 ? GLN L 185 ASN L 186 D 2 GLU A 193 ? TYR A 194 ? GLU L 189 TYR L 190 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 35 ? O ALA L 31 N VAL A 25 ? N VAL L 21 A 2 3 O LEU A 24 ? O LEU L 20 N THR A 10 ? N THR L 6 A 3 4 N VAL A 11 ? N VAL L 7 O LEU A 60 ? O LEU L 56 A 4 5 N VAL A 57 ? N VAL L 53 O LYS A 137 ? O LYS L 133 B 1 2 N ILE A 67 ? N ILE L 63 O GLY A 116 ? O GLY L 112 B 2 3 O VAL A 117 ? O VAL L 113 N HIS A 101 ? N HIS L 97 C 1 2 O VAL A 174 ? O VAL L 170 N TRP A 162 ? N TRP L 158 C 2 3 O ARG A 165 ? O ARG L 161 N ALA A 154 ? N ALA L 150 C 3 4 N LEU A 153 ? N LEU L 149 O GLN A 198 ? O GLN L 194 D 1 2 N ASN A 190 ? N ASN L 186 O GLU A 193 ? O GLU L 189 # _database_PDB_matrix.entry_id 1YF5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YF5 _atom_sites.fract_transf_matrix[1][1] 0.016392 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004705 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011273 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018789 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -3 ? ? ? L . n A 1 2 GLU 2 -2 ? ? ? L . n A 1 3 GLY 3 -1 ? ? ? L . n A 1 4 SER 4 0 ? ? ? L . n A 1 5 VAL 5 1 ? ? ? L . n A 1 6 SER 6 2 2 SER SER L . n A 1 7 GLU 7 3 3 GLU GLU L . n A 1 8 PHE 8 4 4 PHE PHE L . n A 1 9 LEU 9 5 5 LEU LEU L . n A 1 10 THR 10 6 6 THR THR L . n A 1 11 VAL 11 7 7 VAL VAL L . n A 1 12 ARG 12 8 8 ARG ARG L . n A 1 13 LEU 13 9 9 LEU LEU L . n A 1 14 SER 14 10 10 SER SER L . n A 1 15 SER 15 11 11 SER SER L . n A 1 16 GLN 16 12 12 GLN GLN L . n A 1 17 LYS 17 13 13 LYS LYS L . n A 1 18 GLU 18 14 14 GLU GLU L . n A 1 19 ALA 19 15 15 ALA ALA L . n A 1 20 ASP 20 16 16 ASP ASP L . n A 1 21 ILE 21 17 17 ILE ILE L . n A 1 22 PRO 22 18 18 PRO PRO L . n A 1 23 TRP 23 19 19 TRP TRP L . n A 1 24 LEU 24 20 20 LEU LEU L . n A 1 25 VAL 25 21 21 VAL VAL L . n A 1 26 TRP 26 22 22 TRP TRP L . n A 1 27 SER 27 23 23 SER SER L . n A 1 28 ALA 28 24 24 ALA ALA L . n A 1 29 GLU 29 25 25 GLU GLU L . n A 1 30 GLN 30 26 26 GLN GLN L . n A 1 31 GLN 31 27 27 GLN GLN L . n A 1 32 GLU 32 28 28 GLU GLU L . n A 1 33 VAL 33 29 29 VAL VAL L . n A 1 34 ILE 34 30 30 ILE ILE L . n A 1 35 ALA 35 31 31 ALA ALA L . n A 1 36 SER 36 32 32 SER SER L . n A 1 37 GLY 37 33 33 GLY GLY L . n A 1 38 GLN 38 34 34 GLN GLN L . n A 1 39 VAL 39 35 35 VAL VAL L . n A 1 40 ALA 40 36 36 ALA ALA L . n A 1 41 GLY 41 37 37 GLY GLY L . n A 1 42 TRP 42 38 38 TRP TRP L . n A 1 43 GLU 43 39 39 GLU GLU L . n A 1 44 ALA 44 40 40 ALA ALA L . n A 1 45 LEU 45 41 41 LEU LEU L . n A 1 46 HIS 46 42 42 HIS HIS L . n A 1 47 GLU 47 43 43 GLU GLU L . n A 1 48 ILE 48 44 44 ILE ILE L . n A 1 49 GLU 49 45 45 GLU GLU L . n A 1 50 SER 50 46 46 SER SER L . n A 1 51 TYR 51 47 47 TYR TYR L . n A 1 52 ALA 52 48 48 ALA ALA L . n A 1 53 ASP 53 49 49 ASP ASP L . n A 1 54 GLN 54 50 50 GLN GLN L . n A 1 55 ARG 55 51 51 ARG ARG L . n A 1 56 SER 56 52 52 SER SER L . n A 1 57 VAL 57 53 53 VAL VAL L . n A 1 58 VAL 58 54 54 VAL VAL L . n A 1 59 VAL 59 55 55 VAL VAL L . n A 1 60 LEU 60 56 56 LEU LEU L . n A 1 61 LEU 61 57 57 LEU LEU L . n A 1 62 ALA 62 58 58 ALA ALA L . n A 1 63 ALA 63 59 59 ALA ALA L . n A 1 64 SER 64 60 60 SER SER L . n A 1 65 ASP 65 61 61 ASP ASP L . n A 1 66 LEU 66 62 62 LEU LEU L . n A 1 67 ILE 67 63 63 ILE ILE L . n A 1 68 LEU 68 64 64 LEU LEU L . n A 1 69 THR 69 65 65 THR THR L . n A 1 70 SER 70 66 66 SER SER L . n A 1 71 VAL 71 67 67 VAL VAL L . n A 1 72 GLU 72 68 68 GLU GLU L . n A 1 73 ILE 73 69 69 ILE ILE L . n A 1 74 PRO 74 70 70 PRO PRO L . n A 1 75 PRO 75 71 71 PRO PRO L . n A 1 76 GLY 76 72 72 GLY GLY L . n A 1 77 ALA 77 73 73 ALA ALA L . n A 1 78 SER 78 74 74 SER SER L . n A 1 79 ARG 79 75 75 ARG ARG L . n A 1 80 GLN 80 76 76 GLN GLN L . n A 1 81 LEU 81 77 77 LEU LEU L . n A 1 82 GLU 82 78 78 GLU GLU L . n A 1 83 ASN 83 79 79 ASN ASN L . n A 1 84 MSE 84 80 80 MSE MSE L . n A 1 85 LEU 85 81 81 LEU LEU L . n A 1 86 PRO 86 82 82 PRO PRO L . n A 1 87 TYR 87 83 83 TYR TYR L . n A 1 88 LEU 88 84 84 LEU LEU L . n A 1 89 LEU 89 85 85 LEU LEU L . n A 1 90 GLU 90 86 86 GLU GLU L . n A 1 91 ASP 91 87 87 ASP ASP L . n A 1 92 GLU 92 88 88 GLU GLU L . n A 1 93 ILE 93 89 89 ILE ILE L . n A 1 94 ALA 94 90 90 ALA ALA L . n A 1 95 GLN 95 91 91 GLN GLN L . n A 1 96 ASP 96 92 92 ASP ASP L . n A 1 97 VAL 97 93 93 VAL VAL L . n A 1 98 GLU 98 94 94 GLU GLU L . n A 1 99 ASP 99 95 95 ASP ASP L . n A 1 100 VAL 100 96 96 VAL VAL L . n A 1 101 HIS 101 97 97 HIS HIS L . n A 1 102 PHE 102 98 98 PHE PHE L . n A 1 103 CYS 103 99 99 CYS CYS L . n A 1 104 VAL 104 100 100 VAL VAL L . n A 1 105 LEU 105 101 101 LEU LEU L . n A 1 106 SER 106 102 102 SER SER L . n A 1 107 LYS 107 103 103 LYS LYS L . n A 1 108 GLY 108 104 104 GLY GLY L . n A 1 109 ARG 109 105 105 ARG ARG L . n A 1 110 GLU 110 106 106 GLU GLU L . n A 1 111 THR 111 107 107 THR THR L . n A 1 112 ALA 112 108 108 ALA ALA L . n A 1 113 ASP 113 109 109 ASP ASP L . n A 1 114 VAL 114 110 110 VAL VAL L . n A 1 115 VAL 115 111 111 VAL VAL L . n A 1 116 GLY 116 112 112 GLY GLY L . n A 1 117 VAL 117 113 113 VAL VAL L . n A 1 118 ASP 118 114 114 ASP ASP L . n A 1 119 ARG 119 115 115 ARG ARG L . n A 1 120 LEU 120 116 116 LEU LEU L . n A 1 121 TRP 121 117 117 TRP TRP L . n A 1 122 LEU 122 118 118 LEU LEU L . n A 1 123 ARG 123 119 119 ARG ARG L . n A 1 124 ALA 124 120 120 ALA ALA L . n A 1 125 CYS 125 121 121 CYS CYS L . n A 1 126 LEU 126 122 122 LEU LEU L . n A 1 127 ASP 127 123 123 ASP ASP L . n A 1 128 HIS 128 124 124 HIS HIS L . n A 1 129 LEU 129 125 125 LEU LEU L . n A 1 130 LYS 130 126 126 LYS LYS L . n A 1 131 ALA 131 127 127 ALA ALA L . n A 1 132 CYS 132 128 128 CYS CYS L . n A 1 133 GLY 133 129 129 GLY GLY L . n A 1 134 PHE 134 130 130 PHE PHE L . n A 1 135 ASP 135 131 131 ASP ASP L . n A 1 136 VAL 136 132 132 VAL VAL L . n A 1 137 LYS 137 133 133 LYS LYS L . n A 1 138 ARG 138 134 134 ARG ARG L . n A 1 139 VAL 139 135 135 VAL VAL L . n A 1 140 LEU 140 136 136 LEU LEU L . n A 1 141 PRO 141 137 137 PRO PRO L . n A 1 142 ASP 142 138 138 ASP ASP L . n A 1 143 VAL 143 139 139 VAL VAL L . n A 1 144 LEU 144 140 140 LEU LEU L . n A 1 145 ALA 145 141 141 ALA ALA L . n A 1 146 ILE 146 142 142 ILE ILE L . n A 1 147 PRO 147 143 143 PRO PRO L . n A 1 148 ARG 148 144 144 ARG ARG L . n A 1 149 PRO 149 145 145 PRO PRO L . n A 1 150 GLU 150 146 146 GLU GLU L . n A 1 151 HIS 151 147 147 HIS HIS L . n A 1 152 GLY 152 148 148 GLY GLY L . n A 1 153 LEU 153 149 149 LEU LEU L . n A 1 154 ALA 154 150 150 ALA ALA L . n A 1 155 ALA 155 151 151 ALA ALA L . n A 1 156 LEU 156 152 152 LEU LEU L . n A 1 157 GLN 157 153 153 GLN GLN L . n A 1 158 LEU 158 154 154 LEU LEU L . n A 1 159 GLY 159 155 155 GLY GLY L . n A 1 160 ASP 160 156 156 ASP ASP L . n A 1 161 GLU 161 157 157 GLU GLU L . n A 1 162 TRP 162 158 158 TRP TRP L . n A 1 163 LEU 163 159 159 LEU LEU L . n A 1 164 VAL 164 160 160 VAL VAL L . n A 1 165 ARG 165 161 161 ARG ARG L . n A 1 166 LYS 166 162 162 LYS LYS L . n A 1 167 SER 167 163 163 SER SER L . n A 1 168 THR 168 164 164 THR THR L . n A 1 169 THR 169 165 165 THR THR L . n A 1 170 GLN 170 166 166 GLN GLN L . n A 1 171 GLY 171 167 167 GLY GLY L . n A 1 172 MSE 172 168 168 MSE MSE L . n A 1 173 ALA 173 169 169 ALA ALA L . n A 1 174 VAL 174 170 170 VAL VAL L . n A 1 175 ASP 175 171 171 ASP ASP L . n A 1 176 ALA 176 172 172 ALA ALA L . n A 1 177 GLN 177 173 173 GLN GLN L . n A 1 178 TRP 178 174 174 TRP TRP L . n A 1 179 LEU 179 175 175 LEU LEU L . n A 1 180 SER 180 176 176 SER SER L . n A 1 181 LEU 181 177 177 LEU LEU L . n A 1 182 LEU 182 178 178 LEU LEU L . n A 1 183 ALA 183 179 179 ALA ALA L . n A 1 184 ALA 184 180 180 ALA ALA L . n A 1 185 SER 185 181 181 SER SER L . n A 1 186 ASP 186 182 182 ASP ASP L . n A 1 187 TRP 187 183 183 TRP TRP L . n A 1 188 VAL 188 184 184 VAL VAL L . n A 1 189 GLN 189 185 185 GLN GLN L . n A 1 190 ASN 190 186 186 ASN ASN L . n A 1 191 GLU 191 187 187 GLU GLU L . n A 1 192 GLY 192 188 188 GLY GLY L . n A 1 193 GLU 193 189 189 GLU GLU L . n A 1 194 TYR 194 190 190 TYR TYR L . n A 1 195 LEU 195 191 191 LEU LEU L . n A 1 196 PRO 196 192 192 PRO PRO L . n A 1 197 LEU 197 193 193 LEU LEU L . n A 1 198 GLN 198 194 194 GLN GLN L . n A 1 199 ALA 199 195 195 ALA ALA L . n A 1 200 LEU 200 196 196 LEU LEU L . n A 1 201 THR 201 197 197 THR THR L . n A 1 202 PRO 202 198 198 PRO PRO L . n A 1 203 LEU 203 199 199 LEU LEU L . n A 1 204 PRO 204 200 200 PRO PRO L . n A 1 205 GLU 205 201 201 GLU GLU L . n A 1 206 LEU 206 202 202 LEU LEU L . n A 1 207 SER 207 203 203 SER SER L . n A 1 208 LEU 208 204 204 LEU LEU L . n A 1 209 ALA 209 205 205 ALA ALA L . n A 1 210 GLU 210 206 206 GLU GLU L . n A 1 211 THR 211 207 207 THR THR L . n A 1 212 GLN 212 208 208 GLN GLN L . n A 1 213 GLU 213 209 209 GLU GLU L . n A 1 214 TRP 214 210 210 TRP TRP L . n A 1 215 ARG 215 211 211 ARG ARG L . n A 1 216 TYR 216 212 212 TYR TYR L . n A 1 217 GLU 217 213 213 GLU GLU L . n A 1 218 PRO 218 214 214 PRO PRO L . n A 1 219 SER 219 215 215 SER SER L . n A 1 220 GLY 220 216 216 GLY GLY L . n A 1 221 LEU 221 217 217 LEU LEU L . n A 1 222 VAL 222 218 218 VAL VAL L . n A 1 223 MSE 223 219 219 MSE MSE L . n A 1 224 GLN 224 220 220 GLN GLN L . n A 1 225 LEU 225 221 221 LEU LEU L . n A 1 226 LEU 226 222 222 LEU LEU L . n A 1 227 THR 227 223 223 THR THR L . n A 1 228 GLN 228 224 224 GLN GLN L . n A 1 229 GLU 229 225 225 GLU GLU L . n A 1 230 ALA 230 226 226 ALA ALA L . n A 1 231 LEU 231 227 227 LEU LEU L . n A 1 232 THR 232 228 228 THR THR L . n A 1 233 SER 233 229 229 SER SER L . n A 1 234 LYS 234 230 230 LYS LYS L . n A 1 235 PHE 235 231 231 PHE PHE L . n A 1 236 ASN 236 232 232 ASN ASN L . n A 1 237 LEU 237 233 233 LEU LEU L . n A 1 238 LEU 238 234 234 LEU LEU L . n A 1 239 THR 239 235 235 THR THR L . n A 1 240 GLY 240 236 236 GLY GLY L . n A 1 241 SER 241 237 237 SER SER L . n A 1 242 PHE 242 238 238 PHE PHE L . n A 1 243 LYS 243 239 239 LYS LYS L . n A 1 244 LEU 244 240 ? ? ? L . n A 1 245 LYS 245 241 ? ? ? L . n A 1 246 SER 246 242 ? ? ? L . n A 1 247 LEU 247 243 ? ? ? L . n A 1 248 GLU 248 244 ? ? ? L . n A 1 249 HIS 249 245 ? ? ? L . n A 1 250 HIS 250 246 ? ? ? L . n A 1 251 HIS 251 247 ? ? ? L . n A 1 252 HIS 252 248 ? ? ? L . n A 1 253 HIS 253 249 ? ? ? L . n A 1 254 HIS 254 250 ? ? ? L . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 251 1 HOH HOH L . B 2 HOH 2 252 2 HOH HOH L . B 2 HOH 3 253 3 HOH HOH L . B 2 HOH 4 254 4 HOH HOH L . B 2 HOH 5 255 5 HOH HOH L . B 2 HOH 6 256 6 HOH HOH L . B 2 HOH 7 257 7 HOH HOH L . B 2 HOH 8 258 8 HOH HOH L . B 2 HOH 9 259 9 HOH HOH L . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 84 L MSE 80 ? MET SELENOMETHIONINE 2 A MSE 172 L MSE 168 ? MET SELENOMETHIONINE 3 A MSE 223 L MSE 219 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_755 -x+2,y,-z -1.0000000000 0.0000000000 0.0000000000 122.0120000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-05-03 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 5 'Structure model' 1 4 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_chem_comp_atom.atom_id' 6 5 'Structure model' '_chem_comp_bond.atom_id_2' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 45.6585 _pdbx_refine_tls.origin_y -4.0897 _pdbx_refine_tls.origin_z 12.5340 _pdbx_refine_tls.T[1][1] -0.0929 _pdbx_refine_tls.T[2][2] 0.0095 _pdbx_refine_tls.T[3][3] -0.1815 _pdbx_refine_tls.T[1][2] -0.0659 _pdbx_refine_tls.T[1][3] -0.1110 _pdbx_refine_tls.T[2][3] -0.1411 _pdbx_refine_tls.L[1][1] 6.3612 _pdbx_refine_tls.L[2][2] 9.8419 _pdbx_refine_tls.L[3][3] 7.3842 _pdbx_refine_tls.L[1][2] 3.1532 _pdbx_refine_tls.L[1][3] -3.3137 _pdbx_refine_tls.L[2][3] -3.5918 _pdbx_refine_tls.S[1][1] 0.6691 _pdbx_refine_tls.S[1][2] -0.5171 _pdbx_refine_tls.S[1][3] 0.5673 _pdbx_refine_tls.S[2][1] 0.9107 _pdbx_refine_tls.S[2][2] -0.5181 _pdbx_refine_tls.S[2][3] 0.6520 _pdbx_refine_tls.S[3][1] -0.1158 _pdbx_refine_tls.S[3][2] -0.2308 _pdbx_refine_tls.S[3][3] -0.1510 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 6 2 A 243 239 ? L L 'X-RAY DIFFRACTION' ? 2 1 B 1 251 B 9 259 ? L L 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TRP _pdbx_validate_torsion.auth_asym_id L _pdbx_validate_torsion.auth_seq_id 210 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -107.67 _pdbx_validate_torsion.psi 61.71 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L MET -3 ? A MET 1 2 1 Y 1 L GLU -2 ? A GLU 2 3 1 Y 1 L GLY -1 ? A GLY 3 4 1 Y 1 L SER 0 ? A SER 4 5 1 Y 1 L VAL 1 ? A VAL 5 6 1 Y 1 L LEU 240 ? A LEU 244 7 1 Y 1 L LYS 241 ? A LYS 245 8 1 Y 1 L SER 242 ? A SER 246 9 1 Y 1 L LEU 243 ? A LEU 247 10 1 Y 1 L GLU 244 ? A GLU 248 11 1 Y 1 L HIS 245 ? A HIS 249 12 1 Y 1 L HIS 246 ? A HIS 250 13 1 Y 1 L HIS 247 ? A HIS 251 14 1 Y 1 L HIS 248 ? A HIS 252 15 1 Y 1 L HIS 249 ? A HIS 253 16 1 Y 1 L HIS 250 ? A HIS 254 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 MSE N N N N 250 MSE CA C N S 251 MSE C C N N 252 MSE O O N N 253 MSE OXT O N N 254 MSE CB C N N 255 MSE CG C N N 256 MSE SE SE N N 257 MSE CE C N N 258 MSE H H N N 259 MSE H2 H N N 260 MSE HA H N N 261 MSE HXT H N N 262 MSE HB2 H N N 263 MSE HB3 H N N 264 MSE HG2 H N N 265 MSE HG3 H N N 266 MSE HE1 H N N 267 MSE HE2 H N N 268 MSE HE3 H N N 269 PHE N N N N 270 PHE CA C N S 271 PHE C C N N 272 PHE O O N N 273 PHE CB C N N 274 PHE CG C Y N 275 PHE CD1 C Y N 276 PHE CD2 C Y N 277 PHE CE1 C Y N 278 PHE CE2 C Y N 279 PHE CZ C Y N 280 PHE OXT O N N 281 PHE H H N N 282 PHE H2 H N N 283 PHE HA H N N 284 PHE HB2 H N N 285 PHE HB3 H N N 286 PHE HD1 H N N 287 PHE HD2 H N N 288 PHE HE1 H N N 289 PHE HE2 H N N 290 PHE HZ H N N 291 PHE HXT H N N 292 PRO N N N N 293 PRO CA C N S 294 PRO C C N N 295 PRO O O N N 296 PRO CB C N N 297 PRO CG C N N 298 PRO CD C N N 299 PRO OXT O N N 300 PRO H H N N 301 PRO HA H N N 302 PRO HB2 H N N 303 PRO HB3 H N N 304 PRO HG2 H N N 305 PRO HG3 H N N 306 PRO HD2 H N N 307 PRO HD3 H N N 308 PRO HXT H N N 309 SER N N N N 310 SER CA C N S 311 SER C C N N 312 SER O O N N 313 SER CB C N N 314 SER OG O N N 315 SER OXT O N N 316 SER H H N N 317 SER H2 H N N 318 SER HA H N N 319 SER HB2 H N N 320 SER HB3 H N N 321 SER HG H N N 322 SER HXT H N N 323 THR N N N N 324 THR CA C N S 325 THR C C N N 326 THR O O N N 327 THR CB C N R 328 THR OG1 O N N 329 THR CG2 C N N 330 THR OXT O N N 331 THR H H N N 332 THR H2 H N N 333 THR HA H N N 334 THR HB H N N 335 THR HG1 H N N 336 THR HG21 H N N 337 THR HG22 H N N 338 THR HG23 H N N 339 THR HXT H N N 340 TRP N N N N 341 TRP CA C N S 342 TRP C C N N 343 TRP O O N N 344 TRP CB C N N 345 TRP CG C Y N 346 TRP CD1 C Y N 347 TRP CD2 C Y N 348 TRP NE1 N Y N 349 TRP CE2 C Y N 350 TRP CE3 C Y N 351 TRP CZ2 C Y N 352 TRP CZ3 C Y N 353 TRP CH2 C Y N 354 TRP OXT O N N 355 TRP H H N N 356 TRP H2 H N N 357 TRP HA H N N 358 TRP HB2 H N N 359 TRP HB3 H N N 360 TRP HD1 H N N 361 TRP HE1 H N N 362 TRP HE3 H N N 363 TRP HZ2 H N N 364 TRP HZ3 H N N 365 TRP HH2 H N N 366 TRP HXT H N N 367 TYR N N N N 368 TYR CA C N S 369 TYR C C N N 370 TYR O O N N 371 TYR CB C N N 372 TYR CG C Y N 373 TYR CD1 C Y N 374 TYR CD2 C Y N 375 TYR CE1 C Y N 376 TYR CE2 C Y N 377 TYR CZ C Y N 378 TYR OH O N N 379 TYR OXT O N N 380 TYR H H N N 381 TYR H2 H N N 382 TYR HA H N N 383 TYR HB2 H N N 384 TYR HB3 H N N 385 TYR HD1 H N N 386 TYR HD2 H N N 387 TYR HE1 H N N 388 TYR HE2 H N N 389 TYR HH H N N 390 TYR HXT H N N 391 VAL N N N N 392 VAL CA C N S 393 VAL C C N N 394 VAL O O N N 395 VAL CB C N N 396 VAL CG1 C N N 397 VAL CG2 C N N 398 VAL OXT O N N 399 VAL H H N N 400 VAL H2 H N N 401 VAL HA H N N 402 VAL HB H N N 403 VAL HG11 H N N 404 VAL HG12 H N N 405 VAL HG13 H N N 406 VAL HG21 H N N 407 VAL HG22 H N N 408 VAL HG23 H N N 409 VAL HXT H N N 410 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 MSE N CA sing N N 237 MSE N H sing N N 238 MSE N H2 sing N N 239 MSE CA C sing N N 240 MSE CA CB sing N N 241 MSE CA HA sing N N 242 MSE C O doub N N 243 MSE C OXT sing N N 244 MSE OXT HXT sing N N 245 MSE CB CG sing N N 246 MSE CB HB2 sing N N 247 MSE CB HB3 sing N N 248 MSE CG SE sing N N 249 MSE CG HG2 sing N N 250 MSE CG HG3 sing N N 251 MSE SE CE sing N N 252 MSE CE HE1 sing N N 253 MSE CE HE2 sing N N 254 MSE CE HE3 sing N N 255 PHE N CA sing N N 256 PHE N H sing N N 257 PHE N H2 sing N N 258 PHE CA C sing N N 259 PHE CA CB sing N N 260 PHE CA HA sing N N 261 PHE C O doub N N 262 PHE C OXT sing N N 263 PHE CB CG sing N N 264 PHE CB HB2 sing N N 265 PHE CB HB3 sing N N 266 PHE CG CD1 doub Y N 267 PHE CG CD2 sing Y N 268 PHE CD1 CE1 sing Y N 269 PHE CD1 HD1 sing N N 270 PHE CD2 CE2 doub Y N 271 PHE CD2 HD2 sing N N 272 PHE CE1 CZ doub Y N 273 PHE CE1 HE1 sing N N 274 PHE CE2 CZ sing Y N 275 PHE CE2 HE2 sing N N 276 PHE CZ HZ sing N N 277 PHE OXT HXT sing N N 278 PRO N CA sing N N 279 PRO N CD sing N N 280 PRO N H sing N N 281 PRO CA C sing N N 282 PRO CA CB sing N N 283 PRO CA HA sing N N 284 PRO C O doub N N 285 PRO C OXT sing N N 286 PRO CB CG sing N N 287 PRO CB HB2 sing N N 288 PRO CB HB3 sing N N 289 PRO CG CD sing N N 290 PRO CG HG2 sing N N 291 PRO CG HG3 sing N N 292 PRO CD HD2 sing N N 293 PRO CD HD3 sing N N 294 PRO OXT HXT sing N N 295 SER N CA sing N N 296 SER N H sing N N 297 SER N H2 sing N N 298 SER CA C sing N N 299 SER CA CB sing N N 300 SER CA HA sing N N 301 SER C O doub N N 302 SER C OXT sing N N 303 SER CB OG sing N N 304 SER CB HB2 sing N N 305 SER CB HB3 sing N N 306 SER OG HG sing N N 307 SER OXT HXT sing N N 308 THR N CA sing N N 309 THR N H sing N N 310 THR N H2 sing N N 311 THR CA C sing N N 312 THR CA CB sing N N 313 THR CA HA sing N N 314 THR C O doub N N 315 THR C OXT sing N N 316 THR CB OG1 sing N N 317 THR CB CG2 sing N N 318 THR CB HB sing N N 319 THR OG1 HG1 sing N N 320 THR CG2 HG21 sing N N 321 THR CG2 HG22 sing N N 322 THR CG2 HG23 sing N N 323 THR OXT HXT sing N N 324 TRP N CA sing N N 325 TRP N H sing N N 326 TRP N H2 sing N N 327 TRP CA C sing N N 328 TRP CA CB sing N N 329 TRP CA HA sing N N 330 TRP C O doub N N 331 TRP C OXT sing N N 332 TRP CB CG sing N N 333 TRP CB HB2 sing N N 334 TRP CB HB3 sing N N 335 TRP CG CD1 doub Y N 336 TRP CG CD2 sing Y N 337 TRP CD1 NE1 sing Y N 338 TRP CD1 HD1 sing N N 339 TRP CD2 CE2 doub Y N 340 TRP CD2 CE3 sing Y N 341 TRP NE1 CE2 sing Y N 342 TRP NE1 HE1 sing N N 343 TRP CE2 CZ2 sing Y N 344 TRP CE3 CZ3 doub Y N 345 TRP CE3 HE3 sing N N 346 TRP CZ2 CH2 doub Y N 347 TRP CZ2 HZ2 sing N N 348 TRP CZ3 CH2 sing Y N 349 TRP CZ3 HZ3 sing N N 350 TRP CH2 HH2 sing N N 351 TRP OXT HXT sing N N 352 TYR N CA sing N N 353 TYR N H sing N N 354 TYR N H2 sing N N 355 TYR CA C sing N N 356 TYR CA CB sing N N 357 TYR CA HA sing N N 358 TYR C O doub N N 359 TYR C OXT sing N N 360 TYR CB CG sing N N 361 TYR CB HB2 sing N N 362 TYR CB HB3 sing N N 363 TYR CG CD1 doub Y N 364 TYR CG CD2 sing Y N 365 TYR CD1 CE1 sing Y N 366 TYR CD1 HD1 sing N N 367 TYR CD2 CE2 doub Y N 368 TYR CD2 HD2 sing N N 369 TYR CE1 CZ doub Y N 370 TYR CE1 HE1 sing N N 371 TYR CE2 CZ sing Y N 372 TYR CE2 HE2 sing N N 373 TYR CZ OH sing N N 374 TYR OH HH sing N N 375 TYR OXT HXT sing N N 376 VAL N CA sing N N 377 VAL N H sing N N 378 VAL N H2 sing N N 379 VAL CA C sing N N 380 VAL CA CB sing N N 381 VAL CA HA sing N N 382 VAL C O doub N N 383 VAL C OXT sing N N 384 VAL CB CG1 sing N N 385 VAL CB CG2 sing N N 386 VAL CB HB sing N N 387 VAL CG1 HG11 sing N N 388 VAL CG1 HG12 sing N N 389 VAL CG1 HG13 sing N N 390 VAL CG2 HG21 sing N N 391 VAL CG2 HG22 sing N N 392 VAL CG2 HG23 sing N N 393 VAL OXT HXT sing N N 394 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1W97 _pdbx_initial_refinement_model.details ? #