data_1YI3 # _entry.id 1YI3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YI3 pdb_00001yi3 10.2210/pdb1yi3/pdb RCSB RCSB031536 ? ? WWPDB D_1000031536 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-01-25 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_entry_details 6 5 'Structure model' pdbx_modification_feature 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 1YI3 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-01-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1YHS _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jacobs, M.D.' 1 'Black, J.' 2 'Futer, O.' 3 'Swenson, L.' 4 'Hare, B.' 5 'Fleming, M.' 6 'Saxena, K.' 7 # _citation.id primary _citation.title 'Pim-1 ligand-bound structures reveal the mechanism of serine/threonine kinase inhibition by LY294002.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 280 _citation.page_first 13728 _citation.page_last 13734 _citation.year 2005 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15657054 _citation.pdbx_database_id_DOI 10.1074/jbc.M413155200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jacobs, M.D.' 1 ? primary 'Black, J.' 2 ? primary 'Futer, O.' 3 ? primary 'Swenson, L.' 4 ? primary 'Hare, B.' 5 ? primary 'Fleming, M.' 6 ? primary 'Saxena, K.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Proto-oncogene serine/threonine-protein kinase Pim-1' 31673.893 1 2.7.1.37 ? ? ? 2 non-polymer syn 2-MORPHOLIN-4-YL-7-PHENYL-4H-CHROMEN-4-ONE 307.343 1 ? ? ? ? 3 water nat water 18.015 134 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN(CME)GVLHRDIKDENILIDLNRGELKLIDFG SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS(SEP)ECQ HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH ; _entity_poly.pdbx_seq_one_letter_code_can ;PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA LRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-MORPHOLIN-4-YL-7-PHENYL-4H-CHROMEN-4-ONE LY2 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 LEU n 1 3 GLU n 1 4 SER n 1 5 GLN n 1 6 TYR n 1 7 GLN n 1 8 VAL n 1 9 GLY n 1 10 PRO n 1 11 LEU n 1 12 LEU n 1 13 GLY n 1 14 SER n 1 15 GLY n 1 16 GLY n 1 17 PHE n 1 18 GLY n 1 19 SER n 1 20 VAL n 1 21 TYR n 1 22 SER n 1 23 GLY n 1 24 ILE n 1 25 ARG n 1 26 VAL n 1 27 SER n 1 28 ASP n 1 29 ASN n 1 30 LEU n 1 31 PRO n 1 32 VAL n 1 33 ALA n 1 34 ILE n 1 35 LYS n 1 36 HIS n 1 37 VAL n 1 38 GLU n 1 39 LYS n 1 40 ASP n 1 41 ARG n 1 42 ILE n 1 43 SER n 1 44 ASP n 1 45 TRP n 1 46 GLY n 1 47 GLU n 1 48 LEU n 1 49 PRO n 1 50 ASN n 1 51 GLY n 1 52 THR n 1 53 ARG n 1 54 VAL n 1 55 PRO n 1 56 MET n 1 57 GLU n 1 58 VAL n 1 59 VAL n 1 60 LEU n 1 61 LEU n 1 62 LYS n 1 63 LYS n 1 64 VAL n 1 65 SER n 1 66 SER n 1 67 GLY n 1 68 PHE n 1 69 SER n 1 70 GLY n 1 71 VAL n 1 72 ILE n 1 73 ARG n 1 74 LEU n 1 75 LEU n 1 76 ASP n 1 77 TRP n 1 78 PHE n 1 79 GLU n 1 80 ARG n 1 81 PRO n 1 82 ASP n 1 83 SER n 1 84 PHE n 1 85 VAL n 1 86 LEU n 1 87 ILE n 1 88 LEU n 1 89 GLU n 1 90 ARG n 1 91 PRO n 1 92 GLU n 1 93 PRO n 1 94 VAL n 1 95 GLN n 1 96 ASP n 1 97 LEU n 1 98 PHE n 1 99 ASP n 1 100 PHE n 1 101 ILE n 1 102 THR n 1 103 GLU n 1 104 ARG n 1 105 GLY n 1 106 ALA n 1 107 LEU n 1 108 GLN n 1 109 GLU n 1 110 GLU n 1 111 LEU n 1 112 ALA n 1 113 ARG n 1 114 SER n 1 115 PHE n 1 116 PHE n 1 117 TRP n 1 118 GLN n 1 119 VAL n 1 120 LEU n 1 121 GLU n 1 122 ALA n 1 123 VAL n 1 124 ARG n 1 125 HIS n 1 126 CYS n 1 127 HIS n 1 128 ASN n 1 129 CME n 1 130 GLY n 1 131 VAL n 1 132 LEU n 1 133 HIS n 1 134 ARG n 1 135 ASP n 1 136 ILE n 1 137 LYS n 1 138 ASP n 1 139 GLU n 1 140 ASN n 1 141 ILE n 1 142 LEU n 1 143 ILE n 1 144 ASP n 1 145 LEU n 1 146 ASN n 1 147 ARG n 1 148 GLY n 1 149 GLU n 1 150 LEU n 1 151 LYS n 1 152 LEU n 1 153 ILE n 1 154 ASP n 1 155 PHE n 1 156 GLY n 1 157 SER n 1 158 GLY n 1 159 ALA n 1 160 LEU n 1 161 LEU n 1 162 LYS n 1 163 ASP n 1 164 THR n 1 165 VAL n 1 166 TYR n 1 167 THR n 1 168 ASP n 1 169 PHE n 1 170 ASP n 1 171 GLY n 1 172 THR n 1 173 ARG n 1 174 VAL n 1 175 TYR n 1 176 SER n 1 177 PRO n 1 178 PRO n 1 179 GLU n 1 180 TRP n 1 181 ILE n 1 182 ARG n 1 183 TYR n 1 184 HIS n 1 185 ARG n 1 186 TYR n 1 187 HIS n 1 188 GLY n 1 189 ARG n 1 190 SER n 1 191 ALA n 1 192 ALA n 1 193 VAL n 1 194 TRP n 1 195 SER n 1 196 LEU n 1 197 GLY n 1 198 ILE n 1 199 LEU n 1 200 LEU n 1 201 TYR n 1 202 ASP n 1 203 MET n 1 204 VAL n 1 205 CYS n 1 206 GLY n 1 207 ASP n 1 208 ILE n 1 209 PRO n 1 210 PHE n 1 211 GLU n 1 212 HIS n 1 213 ASP n 1 214 GLU n 1 215 GLU n 1 216 ILE n 1 217 ILE n 1 218 ARG n 1 219 GLY n 1 220 GLN n 1 221 VAL n 1 222 PHE n 1 223 PHE n 1 224 ARG n 1 225 GLN n 1 226 ARG n 1 227 VAL n 1 228 SER n 1 229 SEP n 1 230 GLU n 1 231 CYS n 1 232 GLN n 1 233 HIS n 1 234 LEU n 1 235 ILE n 1 236 ARG n 1 237 TRP n 1 238 CYS n 1 239 LEU n 1 240 ALA n 1 241 LEU n 1 242 ARG n 1 243 PRO n 1 244 SER n 1 245 ASP n 1 246 ARG n 1 247 PRO n 1 248 THR n 1 249 PHE n 1 250 GLU n 1 251 GLU n 1 252 ILE n 1 253 GLN n 1 254 ASN n 1 255 HIS n 1 256 PRO n 1 257 TRP n 1 258 MET n 1 259 GLN n 1 260 ASP n 1 261 VAL n 1 262 LEU n 1 263 LEU n 1 264 PRO n 1 265 GLN n 1 266 GLU n 1 267 THR n 1 268 ALA n 1 269 GLU n 1 270 ILE n 1 271 HIS n 1 272 LEU n 1 273 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PIM1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21/DE3 pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBEV1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CME 'L-peptide linking' n 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' ? 'C5 H11 N O3 S2' 197.276 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LY2 non-polymer . 2-MORPHOLIN-4-YL-7-PHENYL-4H-CHROMEN-4-ONE '2-(4-MORPHOLINYL)-8-PHENYL-4H-1-BENZOPYRAN-4-ONE' 'C19 H17 N O3' 307.343 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 33 33 PRO PRO A . n A 1 2 LEU 2 34 34 LEU LEU A . n A 1 3 GLU 3 35 35 GLU GLU A . n A 1 4 SER 4 36 36 SER SER A . n A 1 5 GLN 5 37 37 GLN GLN A . n A 1 6 TYR 6 38 38 TYR TYR A . n A 1 7 GLN 7 39 39 GLN GLN A . n A 1 8 VAL 8 40 40 VAL VAL A . n A 1 9 GLY 9 41 41 GLY GLY A . n A 1 10 PRO 10 42 42 PRO PRO A . n A 1 11 LEU 11 43 43 LEU LEU A . n A 1 12 LEU 12 44 44 LEU LEU A . n A 1 13 GLY 13 45 45 GLY GLY A . n A 1 14 SER 14 46 46 SER SER A . n A 1 15 GLY 15 47 47 GLY GLY A . n A 1 16 GLY 16 48 48 GLY GLY A . n A 1 17 PHE 17 49 49 PHE PHE A . n A 1 18 GLY 18 50 50 GLY GLY A . n A 1 19 SER 19 51 51 SER SER A . n A 1 20 VAL 20 52 52 VAL VAL A . n A 1 21 TYR 21 53 53 TYR TYR A . n A 1 22 SER 22 54 54 SER SER A . n A 1 23 GLY 23 55 55 GLY GLY A . n A 1 24 ILE 24 56 56 ILE ILE A . n A 1 25 ARG 25 57 57 ARG ARG A . n A 1 26 VAL 26 58 58 VAL VAL A . n A 1 27 SER 27 59 59 SER SER A . n A 1 28 ASP 28 60 60 ASP ASP A . n A 1 29 ASN 29 61 61 ASN ASN A . n A 1 30 LEU 30 62 62 LEU LEU A . n A 1 31 PRO 31 63 63 PRO PRO A . n A 1 32 VAL 32 64 64 VAL VAL A . n A 1 33 ALA 33 65 65 ALA ALA A . n A 1 34 ILE 34 66 66 ILE ILE A . n A 1 35 LYS 35 67 67 LYS LYS A . n A 1 36 HIS 36 68 68 HIS HIS A . n A 1 37 VAL 37 69 69 VAL VAL A . n A 1 38 GLU 38 70 70 GLU GLU A . n A 1 39 LYS 39 71 71 LYS LYS A . n A 1 40 ASP 40 72 72 ASP ASP A . n A 1 41 ARG 41 73 73 ARG ARG A . n A 1 42 ILE 42 74 74 ILE ILE A . n A 1 43 SER 43 75 75 SER SER A . n A 1 44 ASP 44 76 76 ASP ASP A . n A 1 45 TRP 45 77 77 TRP TRP A . n A 1 46 GLY 46 78 78 GLY GLY A . n A 1 47 GLU 47 79 79 GLU GLU A . n A 1 48 LEU 48 80 ? ? ? A . n A 1 49 PRO 49 81 ? ? ? A . n A 1 50 ASN 50 82 ? ? ? A . n A 1 51 GLY 51 83 ? ? ? A . n A 1 52 THR 52 84 84 THR THR A . n A 1 53 ARG 53 85 85 ARG ARG A . n A 1 54 VAL 54 86 86 VAL VAL A . n A 1 55 PRO 55 87 87 PRO PRO A . n A 1 56 MET 56 88 88 MET MET A . n A 1 57 GLU 57 89 89 GLU GLU A . n A 1 58 VAL 58 90 90 VAL VAL A . n A 1 59 VAL 59 91 91 VAL VAL A . n A 1 60 LEU 60 92 92 LEU LEU A . n A 1 61 LEU 61 93 93 LEU LEU A . n A 1 62 LYS 62 94 94 LYS LYS A . n A 1 63 LYS 63 95 95 LYS LYS A . n A 1 64 VAL 64 96 96 VAL VAL A . n A 1 65 SER 65 97 97 SER SER A . n A 1 66 SER 66 98 98 SER SER A . n A 1 67 GLY 67 99 99 GLY GLY A . n A 1 68 PHE 68 100 100 PHE PHE A . n A 1 69 SER 69 101 101 SER SER A . n A 1 70 GLY 70 102 102 GLY GLY A . n A 1 71 VAL 71 103 103 VAL VAL A . n A 1 72 ILE 72 104 104 ILE ILE A . n A 1 73 ARG 73 105 105 ARG ARG A . n A 1 74 LEU 74 106 106 LEU LEU A . n A 1 75 LEU 75 107 107 LEU LEU A . n A 1 76 ASP 76 108 108 ASP ASP A . n A 1 77 TRP 77 109 109 TRP TRP A . n A 1 78 PHE 78 110 110 PHE PHE A . n A 1 79 GLU 79 111 111 GLU GLU A . n A 1 80 ARG 80 112 112 ARG ARG A . n A 1 81 PRO 81 113 113 PRO PRO A . n A 1 82 ASP 82 114 114 ASP ASP A . n A 1 83 SER 83 115 115 SER SER A . n A 1 84 PHE 84 116 116 PHE PHE A . n A 1 85 VAL 85 117 117 VAL VAL A . n A 1 86 LEU 86 118 118 LEU LEU A . n A 1 87 ILE 87 119 119 ILE ILE A . n A 1 88 LEU 88 120 120 LEU LEU A . n A 1 89 GLU 89 121 121 GLU GLU A . n A 1 90 ARG 90 122 122 ARG ARG A . n A 1 91 PRO 91 123 123 PRO PRO A . n A 1 92 GLU 92 124 124 GLU GLU A . n A 1 93 PRO 93 125 125 PRO PRO A . n A 1 94 VAL 94 126 126 VAL VAL A . n A 1 95 GLN 95 127 127 GLN GLN A . n A 1 96 ASP 96 128 128 ASP ASP A . n A 1 97 LEU 97 129 129 LEU LEU A . n A 1 98 PHE 98 130 130 PHE PHE A . n A 1 99 ASP 99 131 131 ASP ASP A . n A 1 100 PHE 100 132 132 PHE PHE A . n A 1 101 ILE 101 133 133 ILE ILE A . n A 1 102 THR 102 134 134 THR THR A . n A 1 103 GLU 103 135 135 GLU GLU A . n A 1 104 ARG 104 136 136 ARG ARG A . n A 1 105 GLY 105 137 137 GLY GLY A . n A 1 106 ALA 106 138 138 ALA ALA A . n A 1 107 LEU 107 139 139 LEU LEU A . n A 1 108 GLN 108 140 140 GLN GLN A . n A 1 109 GLU 109 141 141 GLU GLU A . n A 1 110 GLU 110 142 142 GLU GLU A . n A 1 111 LEU 111 143 143 LEU LEU A . n A 1 112 ALA 112 144 144 ALA ALA A . n A 1 113 ARG 113 145 145 ARG ARG A . n A 1 114 SER 114 146 146 SER SER A . n A 1 115 PHE 115 147 147 PHE PHE A . n A 1 116 PHE 116 148 148 PHE PHE A . n A 1 117 TRP 117 149 149 TRP TRP A . n A 1 118 GLN 118 150 150 GLN GLN A . n A 1 119 VAL 119 151 151 VAL VAL A . n A 1 120 LEU 120 152 152 LEU LEU A . n A 1 121 GLU 121 153 153 GLU GLU A . n A 1 122 ALA 122 154 154 ALA ALA A . n A 1 123 VAL 123 155 155 VAL VAL A . n A 1 124 ARG 124 156 156 ARG ARG A . n A 1 125 HIS 125 157 157 HIS HIS A . n A 1 126 CYS 126 158 158 CYS CYS A . n A 1 127 HIS 127 159 159 HIS HIS A . n A 1 128 ASN 128 160 160 ASN ASN A . n A 1 129 CME 129 161 161 CME CME A . n A 1 130 GLY 130 162 162 GLY GLY A . n A 1 131 VAL 131 163 163 VAL VAL A . n A 1 132 LEU 132 164 164 LEU LEU A . n A 1 133 HIS 133 165 165 HIS HIS A . n A 1 134 ARG 134 166 166 ARG ARG A . n A 1 135 ASP 135 167 167 ASP ASP A . n A 1 136 ILE 136 168 168 ILE ILE A . n A 1 137 LYS 137 169 169 LYS LYS A . n A 1 138 ASP 138 170 170 ASP ASP A . n A 1 139 GLU 139 171 171 GLU GLU A . n A 1 140 ASN 140 172 172 ASN ASN A . n A 1 141 ILE 141 173 173 ILE ILE A . n A 1 142 LEU 142 174 174 LEU LEU A . n A 1 143 ILE 143 175 175 ILE ILE A . n A 1 144 ASP 144 176 176 ASP ASP A . n A 1 145 LEU 145 177 177 LEU LEU A . n A 1 146 ASN 146 178 178 ASN ASN A . n A 1 147 ARG 147 179 179 ARG ARG A . n A 1 148 GLY 148 180 180 GLY GLY A . n A 1 149 GLU 149 181 181 GLU GLU A . n A 1 150 LEU 150 182 182 LEU LEU A . n A 1 151 LYS 151 183 183 LYS LYS A . n A 1 152 LEU 152 184 184 LEU LEU A . n A 1 153 ILE 153 185 185 ILE ILE A . n A 1 154 ASP 154 186 186 ASP ASP A . n A 1 155 PHE 155 187 187 PHE PHE A . n A 1 156 GLY 156 188 188 GLY GLY A . n A 1 157 SER 157 189 189 SER SER A . n A 1 158 GLY 158 190 190 GLY GLY A . n A 1 159 ALA 159 191 191 ALA ALA A . n A 1 160 LEU 160 192 192 LEU LEU A . n A 1 161 LEU 161 193 193 LEU LEU A . n A 1 162 LYS 162 194 194 LYS LYS A . n A 1 163 ASP 163 195 195 ASP ASP A . n A 1 164 THR 164 196 196 THR THR A . n A 1 165 VAL 165 197 197 VAL VAL A . n A 1 166 TYR 166 198 198 TYR TYR A . n A 1 167 THR 167 199 199 THR THR A . n A 1 168 ASP 168 200 200 ASP ASP A . n A 1 169 PHE 169 201 201 PHE PHE A . n A 1 170 ASP 170 202 202 ASP ASP A . n A 1 171 GLY 171 203 203 GLY GLY A . n A 1 172 THR 172 204 204 THR THR A . n A 1 173 ARG 173 205 205 ARG ARG A . n A 1 174 VAL 174 206 206 VAL VAL A . n A 1 175 TYR 175 207 207 TYR TYR A . n A 1 176 SER 176 208 208 SER SER A . n A 1 177 PRO 177 209 209 PRO PRO A . n A 1 178 PRO 178 210 210 PRO PRO A . n A 1 179 GLU 179 211 211 GLU GLU A . n A 1 180 TRP 180 212 212 TRP TRP A . n A 1 181 ILE 181 213 213 ILE ILE A . n A 1 182 ARG 182 214 214 ARG ARG A . n A 1 183 TYR 183 215 215 TYR TYR A . n A 1 184 HIS 184 216 216 HIS HIS A . n A 1 185 ARG 185 217 217 ARG ARG A . n A 1 186 TYR 186 218 218 TYR TYR A . n A 1 187 HIS 187 219 219 HIS HIS A . n A 1 188 GLY 188 220 220 GLY GLY A . n A 1 189 ARG 189 221 221 ARG ARG A . n A 1 190 SER 190 222 222 SER SER A . n A 1 191 ALA 191 223 223 ALA ALA A . n A 1 192 ALA 192 224 224 ALA ALA A . n A 1 193 VAL 193 225 225 VAL VAL A . n A 1 194 TRP 194 226 226 TRP TRP A . n A 1 195 SER 195 227 227 SER SER A . n A 1 196 LEU 196 228 228 LEU LEU A . n A 1 197 GLY 197 229 229 GLY GLY A . n A 1 198 ILE 198 230 230 ILE ILE A . n A 1 199 LEU 199 231 231 LEU LEU A . n A 1 200 LEU 200 232 232 LEU LEU A . n A 1 201 TYR 201 233 233 TYR TYR A . n A 1 202 ASP 202 234 234 ASP ASP A . n A 1 203 MET 203 235 235 MET MET A . n A 1 204 VAL 204 236 236 VAL VAL A . n A 1 205 CYS 205 237 237 CYS CYS A . n A 1 206 GLY 206 238 238 GLY GLY A . n A 1 207 ASP 207 239 239 ASP ASP A . n A 1 208 ILE 208 240 240 ILE ILE A . n A 1 209 PRO 209 241 241 PRO PRO A . n A 1 210 PHE 210 242 242 PHE PHE A . n A 1 211 GLU 211 243 243 GLU GLU A . n A 1 212 HIS 212 244 244 HIS HIS A . n A 1 213 ASP 213 245 245 ASP ASP A . n A 1 214 GLU 214 246 246 GLU GLU A . n A 1 215 GLU 215 247 247 GLU GLU A . n A 1 216 ILE 216 248 248 ILE ILE A . n A 1 217 ILE 217 249 249 ILE ILE A . n A 1 218 ARG 218 250 250 ARG ARG A . n A 1 219 GLY 219 251 251 GLY GLY A . n A 1 220 GLN 220 252 252 GLN GLN A . n A 1 221 VAL 221 253 253 VAL VAL A . n A 1 222 PHE 222 254 254 PHE PHE A . n A 1 223 PHE 223 255 255 PHE PHE A . n A 1 224 ARG 224 256 256 ARG ARG A . n A 1 225 GLN 225 257 257 GLN GLN A . n A 1 226 ARG 226 258 258 ARG ARG A . n A 1 227 VAL 227 259 259 VAL VAL A . n A 1 228 SER 228 260 260 SER SER A . n A 1 229 SEP 229 261 261 SEP SEP A . n A 1 230 GLU 230 262 262 GLU GLU A . n A 1 231 CYS 231 263 263 CYS CYS A . n A 1 232 GLN 232 264 264 GLN GLN A . n A 1 233 HIS 233 265 265 HIS HIS A . n A 1 234 LEU 234 266 266 LEU LEU A . n A 1 235 ILE 235 267 267 ILE ILE A . n A 1 236 ARG 236 268 268 ARG ARG A . n A 1 237 TRP 237 269 269 TRP TRP A . n A 1 238 CYS 238 270 270 CYS CYS A . n A 1 239 LEU 239 271 271 LEU LEU A . n A 1 240 ALA 240 272 272 ALA ALA A . n A 1 241 LEU 241 273 273 LEU LEU A . n A 1 242 ARG 242 274 274 ARG ARG A . n A 1 243 PRO 243 275 275 PRO PRO A . n A 1 244 SER 244 276 276 SER SER A . n A 1 245 ASP 245 277 277 ASP ASP A . n A 1 246 ARG 246 278 278 ARG ARG A . n A 1 247 PRO 247 279 279 PRO PRO A . n A 1 248 THR 248 280 280 THR THR A . n A 1 249 PHE 249 281 281 PHE PHE A . n A 1 250 GLU 250 282 282 GLU GLU A . n A 1 251 GLU 251 283 283 GLU GLU A . n A 1 252 ILE 252 284 284 ILE ILE A . n A 1 253 GLN 253 285 285 GLN GLN A . n A 1 254 ASN 254 286 286 ASN ASN A . n A 1 255 HIS 255 287 287 HIS HIS A . n A 1 256 PRO 256 288 288 PRO PRO A . n A 1 257 TRP 257 289 289 TRP TRP A . n A 1 258 MET 258 290 290 MET MET A . n A 1 259 GLN 259 291 291 GLN GLN A . n A 1 260 ASP 260 292 292 ASP ASP A . n A 1 261 VAL 261 293 293 VAL VAL A . n A 1 262 LEU 262 294 294 LEU LEU A . n A 1 263 LEU 263 295 295 LEU LEU A . n A 1 264 PRO 264 296 296 PRO PRO A . n A 1 265 GLN 265 297 297 GLN GLN A . n A 1 266 GLU 266 298 298 GLU GLU A . n A 1 267 THR 267 299 299 THR THR A . n A 1 268 ALA 268 300 300 ALA ALA A . n A 1 269 GLU 269 301 301 GLU GLU A . n A 1 270 ILE 270 302 302 ILE ILE A . n A 1 271 HIS 271 303 303 HIS HIS A . n A 1 272 LEU 272 304 304 LEU LEU A . n A 1 273 HIS 273 305 305 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LY2 1 306 201 LY2 LY2 A . C 3 HOH 1 307 1 HOH HOH A . C 3 HOH 2 308 2 HOH HOH A . C 3 HOH 3 309 3 HOH HOH A . C 3 HOH 4 310 4 HOH HOH A . C 3 HOH 5 311 5 HOH HOH A . C 3 HOH 6 312 6 HOH HOH A . C 3 HOH 7 313 7 HOH HOH A . C 3 HOH 8 314 8 HOH HOH A . C 3 HOH 9 315 9 HOH HOH A . C 3 HOH 10 316 10 HOH HOH A . C 3 HOH 11 317 12 HOH HOH A . C 3 HOH 12 318 13 HOH HOH A . C 3 HOH 13 319 14 HOH HOH A . C 3 HOH 14 320 15 HOH HOH A . C 3 HOH 15 321 16 HOH HOH A . C 3 HOH 16 322 18 HOH HOH A . C 3 HOH 17 323 19 HOH HOH A . C 3 HOH 18 324 20 HOH HOH A . C 3 HOH 19 325 21 HOH HOH A . C 3 HOH 20 326 22 HOH HOH A . C 3 HOH 21 327 23 HOH HOH A . C 3 HOH 22 328 24 HOH HOH A . C 3 HOH 23 329 25 HOH HOH A . C 3 HOH 24 330 26 HOH HOH A . C 3 HOH 25 331 27 HOH HOH A . C 3 HOH 26 332 28 HOH HOH A . C 3 HOH 27 333 29 HOH HOH A . C 3 HOH 28 334 30 HOH HOH A . C 3 HOH 29 335 31 HOH HOH A . C 3 HOH 30 336 33 HOH HOH A . C 3 HOH 31 337 34 HOH HOH A . C 3 HOH 32 338 35 HOH HOH A . C 3 HOH 33 339 37 HOH HOH A . C 3 HOH 34 340 38 HOH HOH A . C 3 HOH 35 341 39 HOH HOH A . C 3 HOH 36 342 40 HOH HOH A . C 3 HOH 37 343 42 HOH HOH A . C 3 HOH 38 344 44 HOH HOH A . C 3 HOH 39 345 46 HOH HOH A . C 3 HOH 40 346 48 HOH HOH A . C 3 HOH 41 347 49 HOH HOH A . C 3 HOH 42 348 50 HOH HOH A . C 3 HOH 43 349 51 HOH HOH A . C 3 HOH 44 350 52 HOH HOH A . C 3 HOH 45 351 56 HOH HOH A . C 3 HOH 46 352 59 HOH HOH A . C 3 HOH 47 353 60 HOH HOH A . C 3 HOH 48 354 61 HOH HOH A . C 3 HOH 49 355 63 HOH HOH A . C 3 HOH 50 356 64 HOH HOH A . C 3 HOH 51 357 65 HOH HOH A . C 3 HOH 52 358 67 HOH HOH A . C 3 HOH 53 359 69 HOH HOH A . C 3 HOH 54 360 71 HOH HOH A . C 3 HOH 55 361 72 HOH HOH A . C 3 HOH 56 362 74 HOH HOH A . C 3 HOH 57 363 76 HOH HOH A . C 3 HOH 58 364 77 HOH HOH A . C 3 HOH 59 365 78 HOH HOH A . C 3 HOH 60 366 79 HOH HOH A . C 3 HOH 61 367 83 HOH HOH A . C 3 HOH 62 368 84 HOH HOH A . C 3 HOH 63 369 85 HOH HOH A . C 3 HOH 64 370 86 HOH HOH A . C 3 HOH 65 371 87 HOH HOH A . C 3 HOH 66 372 88 HOH HOH A . C 3 HOH 67 373 89 HOH HOH A . C 3 HOH 68 374 90 HOH HOH A . C 3 HOH 69 375 91 HOH HOH A . C 3 HOH 70 376 92 HOH HOH A . C 3 HOH 71 377 93 HOH HOH A . C 3 HOH 72 378 94 HOH HOH A . C 3 HOH 73 379 96 HOH HOH A . C 3 HOH 74 380 97 HOH HOH A . C 3 HOH 75 381 99 HOH HOH A . C 3 HOH 76 382 100 HOH HOH A . C 3 HOH 77 383 101 HOH HOH A . C 3 HOH 78 384 102 HOH HOH A . C 3 HOH 79 385 103 HOH HOH A . C 3 HOH 80 386 104 HOH HOH A . C 3 HOH 81 387 105 HOH HOH A . C 3 HOH 82 388 106 HOH HOH A . C 3 HOH 83 389 107 HOH HOH A . C 3 HOH 84 390 108 HOH HOH A . C 3 HOH 85 391 110 HOH HOH A . C 3 HOH 86 392 112 HOH HOH A . C 3 HOH 87 393 113 HOH HOH A . C 3 HOH 88 394 114 HOH HOH A . C 3 HOH 89 395 115 HOH HOH A . C 3 HOH 90 396 116 HOH HOH A . C 3 HOH 91 397 117 HOH HOH A . C 3 HOH 92 398 118 HOH HOH A . C 3 HOH 93 399 119 HOH HOH A . C 3 HOH 94 400 120 HOH HOH A . C 3 HOH 95 401 121 HOH HOH A . C 3 HOH 96 402 124 HOH HOH A . C 3 HOH 97 403 125 HOH HOH A . C 3 HOH 98 404 126 HOH HOH A . C 3 HOH 99 405 127 HOH HOH A . C 3 HOH 100 406 128 HOH HOH A . C 3 HOH 101 407 129 HOH HOH A . C 3 HOH 102 408 130 HOH HOH A . C 3 HOH 103 409 131 HOH HOH A . C 3 HOH 104 410 132 HOH HOH A . C 3 HOH 105 411 133 HOH HOH A . C 3 HOH 106 412 134 HOH HOH A . C 3 HOH 107 413 135 HOH HOH A . C 3 HOH 108 414 136 HOH HOH A . C 3 HOH 109 415 137 HOH HOH A . C 3 HOH 110 416 138 HOH HOH A . C 3 HOH 111 417 140 HOH HOH A . C 3 HOH 112 418 141 HOH HOH A . C 3 HOH 113 419 143 HOH HOH A . C 3 HOH 114 420 145 HOH HOH A . C 3 HOH 115 421 146 HOH HOH A . C 3 HOH 116 422 148 HOH HOH A . C 3 HOH 117 423 149 HOH HOH A . C 3 HOH 118 424 151 HOH HOH A . C 3 HOH 119 425 152 HOH HOH A . C 3 HOH 120 426 153 HOH HOH A . C 3 HOH 121 427 154 HOH HOH A . C 3 HOH 122 428 155 HOH HOH A . C 3 HOH 123 429 156 HOH HOH A . C 3 HOH 124 430 157 HOH HOH A . C 3 HOH 125 431 158 HOH HOH A . C 3 HOH 126 432 159 HOH HOH A . C 3 HOH 127 433 160 HOH HOH A . C 3 HOH 128 434 161 HOH HOH A . C 3 HOH 129 435 162 HOH HOH A . C 3 HOH 130 436 163 HOH HOH A . C 3 HOH 131 437 164 HOH HOH A . C 3 HOH 132 438 165 HOH HOH A . C 3 HOH 133 439 166 HOH HOH A . C 3 HOH 134 440 167 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 79 ? CG ? A GLU 47 CG 2 1 Y 1 A GLU 79 ? CD ? A GLU 47 CD 3 1 Y 1 A GLU 79 ? OE1 ? A GLU 47 OE1 4 1 Y 1 A GLU 79 ? OE2 ? A GLU 47 OE2 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal d*TREK 8.0SSI 'Feb 4 2003' package 'Pflugrath, J.W.' jwp@RigakuMSC.com 'data scaling' http://www.msc.com/protein/dtrek.html ? ? 1 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran ? 2 PDB_EXTRACT 1.501 'July 12, 2004' program H.Yang sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 AMoRE . ? ? ? ? phasing ? ? ? 4 # _cell.entry_id 1YI3 _cell.length_a 97.647 _cell.length_b 97.647 _cell.length_c 80.725 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YI3 _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? # _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 1YI3 _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 64.93 _exptl_crystal.density_Matthews 3.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'ammonium phosphate, citrate buffer, NaCl, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2001-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Osmic mirrors' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.d_resolution_low 19.47 _reflns.d_resolution_high 2.50 _reflns.number_obs 14445 _reflns.percent_possible_obs 94.9 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_redundancy 3.05 _reflns.pdbx_chi_squared 0.950 _reflns.pdbx_scaling_rejects 445 _reflns.pdbx_netI_over_sigmaI 12.0 _reflns.entry_id 1YI3 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.number_all 14445 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_low 2.59 _reflns_shell.d_res_high 2.50 _reflns_shell.number_unique_all 749 _reflns_shell.percent_possible_all 87.6 _reflns_shell.Rmerge_I_obs 0.336 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared 1.130 _reflns_shell.number_unique_obs ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 19.460 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 207485.938 _refine.pdbx_data_cutoff_low_absF 0.000 _refine.ls_percent_reflns_obs 93.400 _refine.ls_number_reflns_obs 14303 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.259 _refine.ls_percent_reflns_R_free 7.700 _refine.ls_number_reflns_R_free 1097 _refine.ls_R_factor_R_free_error 0.008 _refine.B_iso_mean 38.000 _refine.solvent_model_param_bsol 34.336 _refine.solvent_model_param_ksol 0.344 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.aniso_B[1][1] 5.250 _refine.aniso_B[2][2] 5.250 _refine.aniso_B[3][3] -10.490 _refine.aniso_B[1][2] 7.800 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.entry_id 1YI3 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 14303 _refine.ls_R_factor_all 0.208 _refine.ls_R_factor_obs 0.208 _refine.ls_redundancy_reflns_obs ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.occupancy_max ? _refine.occupancy_min ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.Luzzati_coordinate_error_obs 0.300 _refine_analyze.Luzzati_sigma_a_obs 0.490 _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_coordinate_error_free 0.380 _refine_analyze.Luzzati_sigma_a_free 0.540 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1YI3 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2202 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 134 _refine_hist.number_atoms_total 2359 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 19.460 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.72 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.660 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 85.300 _refine_ls_shell.number_reflns_R_work 1979 _refine_ls_shell.R_factor_R_work 0.336 _refine_ls_shell.R_factor_R_free 0.341 _refine_ls_shell.percent_reflns_R_free 7.700 _refine_ls_shell.number_reflns_R_free 166 _refine_ls_shell.R_factor_R_free_error 0.026 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1YI3 _database_PDB_matrix.origx[1][1] 1.0000 _database_PDB_matrix.origx[1][2] 0.0000 _database_PDB_matrix.origx[1][3] 0.0000 _database_PDB_matrix.origx[2][1] 0.0000 _database_PDB_matrix.origx[2][2] 1.0000 _database_PDB_matrix.origx[2][3] 0.0000 _database_PDB_matrix.origx[3][1] 0.0000 _database_PDB_matrix.origx[3][2] 0.0000 _database_PDB_matrix.origx[3][3] 1.0000 _database_PDB_matrix.origx_vector[1] 0.0000 _database_PDB_matrix.origx_vector[2] 0.0000 _database_PDB_matrix.origx_vector[3] 0.0000 # _struct.entry_id 1YI3 _struct.title 'Crystal Structure of Pim-1 bound to LY294002' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YI3 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'Protein kinase, PI3K, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PIM1_HUMAN _struct_ref.pdbx_db_accession P11309 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA LRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH ; _struct_ref.pdbx_align_begin 33 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YI3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 273 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P11309 _struct_ref_seq.db_align_beg 33 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 305 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 33 _struct_ref_seq.pdbx_auth_seq_align_end 305 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YI3 CME A 129 ? UNP P11309 CYS 161 'modified residue' 161 1 1 1YI3 SEP A 229 ? UNP P11309 SER 261 'modified residue' 261 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 1 ? GLN A 5 ? PRO A 33 GLN A 37 1 ? 5 HELX_P HELX_P2 2 ASP A 40 ? ILE A 42 ? ASP A 72 ILE A 74 5 ? 3 HELX_P HELX_P3 3 MET A 56 ? SER A 65 ? MET A 88 SER A 97 1 ? 10 HELX_P HELX_P4 4 LEU A 97 ? GLY A 105 ? LEU A 129 GLY A 137 1 ? 9 HELX_P HELX_P5 5 GLN A 108 ? CME A 129 ? GLN A 140 CME A 161 1 ? 22 HELX_P HELX_P6 6 LYS A 137 ? GLU A 139 ? LYS A 169 GLU A 171 5 ? 3 HELX_P HELX_P7 7 THR A 172 ? SER A 176 ? THR A 204 SER A 208 5 ? 5 HELX_P HELX_P8 8 PRO A 177 ? HIS A 184 ? PRO A 209 HIS A 216 1 ? 8 HELX_P HELX_P9 9 HIS A 187 ? GLY A 206 ? HIS A 219 GLY A 238 1 ? 20 HELX_P HELX_P10 10 HIS A 212 ? GLY A 219 ? HIS A 244 GLY A 251 1 ? 8 HELX_P HELX_P11 11 SER A 228 ? LEU A 239 ? SER A 260 LEU A 271 1 ? 12 HELX_P HELX_P12 12 ARG A 242 ? ARG A 246 ? ARG A 274 ARG A 278 5 ? 5 HELX_P HELX_P13 13 THR A 248 ? ASN A 254 ? THR A 280 ASN A 286 1 ? 7 HELX_P HELX_P14 14 HIS A 255 ? GLN A 259 ? HIS A 287 GLN A 291 5 ? 5 HELX_P HELX_P15 15 LEU A 263 ? LEU A 272 ? LEU A 295 LEU A 304 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 128 C ? ? ? 1_555 A CME 129 N ? ? A ASN 160 A CME 161 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A CME 129 C ? ? ? 1_555 A GLY 130 N ? ? A CME 161 A GLY 162 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A SER 228 C ? ? ? 1_555 A SEP 229 N ? ? A SER 260 A SEP 261 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A SEP 229 C ? ? ? 1_555 A GLU 230 N ? ? A SEP 261 A GLU 262 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CME A 129 ? . . . . CME A 161 ? 1_555 . . . . . . . CYS 1 CME Beta-mercaptoethanol 'Named protein modification' 2 SEP A 229 ? . . . . SEP A 261 ? 1_555 . . . . . . . SER 1 SEP Phosphorylation 'Named protein modification' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 92 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 124 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 93 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 125 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 6 ? GLY A 15 ? TYR A 38 GLY A 47 A 2 GLY A 18 ? ARG A 25 ? GLY A 50 ARG A 57 A 3 PRO A 31 ? GLU A 38 ? PRO A 63 GLU A 70 A 4 SER A 83 ? GLU A 89 ? SER A 115 GLU A 121 A 5 LEU A 74 ? ARG A 80 ? LEU A 106 ARG A 112 B 1 TRP A 45 ? GLY A 46 ? TRP A 77 GLY A 78 B 2 VAL A 54 ? PRO A 55 ? VAL A 86 PRO A 87 C 1 VAL A 94 ? ASP A 96 ? VAL A 126 ASP A 128 C 2 ILE A 141 ? ASP A 144 ? ILE A 173 ASP A 176 C 3 GLU A 149 ? LEU A 152 ? GLU A 181 LEU A 184 D 1 VAL A 131 ? LEU A 132 ? VAL A 163 LEU A 164 D 2 ALA A 159 ? LEU A 160 ? ALA A 191 LEU A 192 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 12 ? N LEU A 44 O VAL A 20 ? O VAL A 52 A 2 3 N SER A 19 ? N SER A 51 O HIS A 36 ? O HIS A 68 A 3 4 N ALA A 33 ? N ALA A 65 O LEU A 88 ? O LEU A 120 A 4 5 O ILE A 87 ? O ILE A 119 N ASP A 76 ? N ASP A 108 B 1 2 N GLY A 46 ? N GLY A 78 O VAL A 54 ? O VAL A 86 C 1 2 N GLN A 95 ? N GLN A 127 O ILE A 143 ? O ILE A 175 C 2 3 N ASP A 144 ? N ASP A 176 O GLU A 149 ? O GLU A 181 D 1 2 N LEU A 132 ? N LEU A 164 O ALA A 159 ? O ALA A 191 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id LY2 _struct_site.pdbx_auth_seq_id 306 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE LY2 A 306' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 LEU A 12 ? LEU A 44 . ? 1_555 ? 2 AC1 11 GLY A 13 ? GLY A 45 . ? 1_555 ? 3 AC1 11 PHE A 17 ? PHE A 49 . ? 1_555 ? 4 AC1 11 VAL A 20 ? VAL A 52 . ? 1_555 ? 5 AC1 11 LYS A 35 ? LYS A 67 . ? 1_555 ? 6 AC1 11 ILE A 72 ? ILE A 104 . ? 1_555 ? 7 AC1 11 LEU A 88 ? LEU A 120 . ? 1_555 ? 8 AC1 11 GLU A 89 ? GLU A 121 . ? 1_555 ? 9 AC1 11 ARG A 90 ? ARG A 122 . ? 1_555 ? 10 AC1 11 LEU A 142 ? LEU A 174 . ? 1_555 ? 11 AC1 11 HOH C . ? HOH A 325 . ? 1_555 ? # _pdbx_entry_details.entry_id 1YI3 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 60 ? ? -156.74 18.30 2 1 VAL A 96 ? ? -91.86 -70.31 3 1 SER A 97 ? ? -7.44 -77.19 4 1 SER A 98 ? ? -20.85 115.73 5 1 SER A 101 ? ? 172.51 179.27 6 1 ASP A 167 ? ? -152.44 40.42 7 1 ASP A 186 ? ? 60.01 85.31 8 1 PHE A 187 ? ? -95.12 30.71 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CME 129 A CME 161 ? CYS 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' 2 A SEP 229 A SEP 261 ? SER PHOSPHOSERINE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 80 ? A LEU 48 2 1 Y 1 A PRO 81 ? A PRO 49 3 1 Y 1 A ASN 82 ? A ASN 50 4 1 Y 1 A GLY 83 ? A GLY 51 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CME N N N N 74 CME CA C N R 75 CME CB C N N 76 CME SG S N N 77 CME SD S N N 78 CME CE C N N 79 CME CZ C N N 80 CME OH O N N 81 CME C C N N 82 CME O O N N 83 CME OXT O N N 84 CME H H N N 85 CME H2 H N N 86 CME HA H N N 87 CME HB2 H N N 88 CME HB3 H N N 89 CME HE2 H N N 90 CME HE3 H N N 91 CME HZ2 H N N 92 CME HZ3 H N N 93 CME HH H N N 94 CME HXT H N N 95 CYS N N N N 96 CYS CA C N R 97 CYS C C N N 98 CYS O O N N 99 CYS CB C N N 100 CYS SG S N N 101 CYS OXT O N N 102 CYS H H N N 103 CYS H2 H N N 104 CYS HA H N N 105 CYS HB2 H N N 106 CYS HB3 H N N 107 CYS HG H N N 108 CYS HXT H N N 109 GLN N N N N 110 GLN CA C N S 111 GLN C C N N 112 GLN O O N N 113 GLN CB C N N 114 GLN CG C N N 115 GLN CD C N N 116 GLN OE1 O N N 117 GLN NE2 N N N 118 GLN OXT O N N 119 GLN H H N N 120 GLN H2 H N N 121 GLN HA H N N 122 GLN HB2 H N N 123 GLN HB3 H N N 124 GLN HG2 H N N 125 GLN HG3 H N N 126 GLN HE21 H N N 127 GLN HE22 H N N 128 GLN HXT H N N 129 GLU N N N N 130 GLU CA C N S 131 GLU C C N N 132 GLU O O N N 133 GLU CB C N N 134 GLU CG C N N 135 GLU CD C N N 136 GLU OE1 O N N 137 GLU OE2 O N N 138 GLU OXT O N N 139 GLU H H N N 140 GLU H2 H N N 141 GLU HA H N N 142 GLU HB2 H N N 143 GLU HB3 H N N 144 GLU HG2 H N N 145 GLU HG3 H N N 146 GLU HE2 H N N 147 GLU HXT H N N 148 GLY N N N N 149 GLY CA C N N 150 GLY C C N N 151 GLY O O N N 152 GLY OXT O N N 153 GLY H H N N 154 GLY H2 H N N 155 GLY HA2 H N N 156 GLY HA3 H N N 157 GLY HXT H N N 158 HIS N N N N 159 HIS CA C N S 160 HIS C C N N 161 HIS O O N N 162 HIS CB C N N 163 HIS CG C Y N 164 HIS ND1 N Y N 165 HIS CD2 C Y N 166 HIS CE1 C Y N 167 HIS NE2 N Y N 168 HIS OXT O N N 169 HIS H H N N 170 HIS H2 H N N 171 HIS HA H N N 172 HIS HB2 H N N 173 HIS HB3 H N N 174 HIS HD1 H N N 175 HIS HD2 H N N 176 HIS HE1 H N N 177 HIS HE2 H N N 178 HIS HXT H N N 179 HOH O O N N 180 HOH H1 H N N 181 HOH H2 H N N 182 ILE N N N N 183 ILE CA C N S 184 ILE C C N N 185 ILE O O N N 186 ILE CB C N S 187 ILE CG1 C N N 188 ILE CG2 C N N 189 ILE CD1 C N N 190 ILE OXT O N N 191 ILE H H N N 192 ILE H2 H N N 193 ILE HA H N N 194 ILE HB H N N 195 ILE HG12 H N N 196 ILE HG13 H N N 197 ILE HG21 H N N 198 ILE HG22 H N N 199 ILE HG23 H N N 200 ILE HD11 H N N 201 ILE HD12 H N N 202 ILE HD13 H N N 203 ILE HXT H N N 204 LEU N N N N 205 LEU CA C N S 206 LEU C C N N 207 LEU O O N N 208 LEU CB C N N 209 LEU CG C N N 210 LEU CD1 C N N 211 LEU CD2 C N N 212 LEU OXT O N N 213 LEU H H N N 214 LEU H2 H N N 215 LEU HA H N N 216 LEU HB2 H N N 217 LEU HB3 H N N 218 LEU HG H N N 219 LEU HD11 H N N 220 LEU HD12 H N N 221 LEU HD13 H N N 222 LEU HD21 H N N 223 LEU HD22 H N N 224 LEU HD23 H N N 225 LEU HXT H N N 226 LY2 N14 N N N 227 LY2 C15 C N N 228 LY2 C19 C N N 229 LY2 C11 C Y N 230 LY2 C16 C N N 231 LY2 O17 O N N 232 LY2 C18 C N N 233 LY2 C1 C Y N 234 LY2 C2 C Y N 235 LY2 C6 C Y N 236 LY2 C3 C Y N 237 LY2 C4 C Y N 238 LY2 C9 C Y N 239 LY2 C5 C Y N 240 LY2 O12 O Y N 241 LY2 C20 C Y N 242 LY2 C25 C Y N 243 LY2 C24 C Y N 244 LY2 C21 C Y N 245 LY2 C22 C Y N 246 LY2 C23 C Y N 247 LY2 C10 C Y N 248 LY2 O13 O N N 249 LY2 H151 H N N 250 LY2 H152 H N N 251 LY2 H191 H N N 252 LY2 H192 H N N 253 LY2 H161 H N N 254 LY2 H162 H N N 255 LY2 H181 H N N 256 LY2 H182 H N N 257 LY2 HC1 H N N 258 LY2 HC2 H N N 259 LY2 HC6 H N N 260 LY2 H25 H N N 261 LY2 H24 H N N 262 LY2 H21 H N N 263 LY2 H22 H N N 264 LY2 H23 H N N 265 LY2 H10 H N N 266 LYS N N N N 267 LYS CA C N S 268 LYS C C N N 269 LYS O O N N 270 LYS CB C N N 271 LYS CG C N N 272 LYS CD C N N 273 LYS CE C N N 274 LYS NZ N N N 275 LYS OXT O N N 276 LYS H H N N 277 LYS H2 H N N 278 LYS HA H N N 279 LYS HB2 H N N 280 LYS HB3 H N N 281 LYS HG2 H N N 282 LYS HG3 H N N 283 LYS HD2 H N N 284 LYS HD3 H N N 285 LYS HE2 H N N 286 LYS HE3 H N N 287 LYS HZ1 H N N 288 LYS HZ2 H N N 289 LYS HZ3 H N N 290 LYS HXT H N N 291 MET N N N N 292 MET CA C N S 293 MET C C N N 294 MET O O N N 295 MET CB C N N 296 MET CG C N N 297 MET SD S N N 298 MET CE C N N 299 MET OXT O N N 300 MET H H N N 301 MET H2 H N N 302 MET HA H N N 303 MET HB2 H N N 304 MET HB3 H N N 305 MET HG2 H N N 306 MET HG3 H N N 307 MET HE1 H N N 308 MET HE2 H N N 309 MET HE3 H N N 310 MET HXT H N N 311 PHE N N N N 312 PHE CA C N S 313 PHE C C N N 314 PHE O O N N 315 PHE CB C N N 316 PHE CG C Y N 317 PHE CD1 C Y N 318 PHE CD2 C Y N 319 PHE CE1 C Y N 320 PHE CE2 C Y N 321 PHE CZ C Y N 322 PHE OXT O N N 323 PHE H H N N 324 PHE H2 H N N 325 PHE HA H N N 326 PHE HB2 H N N 327 PHE HB3 H N N 328 PHE HD1 H N N 329 PHE HD2 H N N 330 PHE HE1 H N N 331 PHE HE2 H N N 332 PHE HZ H N N 333 PHE HXT H N N 334 PRO N N N N 335 PRO CA C N S 336 PRO C C N N 337 PRO O O N N 338 PRO CB C N N 339 PRO CG C N N 340 PRO CD C N N 341 PRO OXT O N N 342 PRO H H N N 343 PRO HA H N N 344 PRO HB2 H N N 345 PRO HB3 H N N 346 PRO HG2 H N N 347 PRO HG3 H N N 348 PRO HD2 H N N 349 PRO HD3 H N N 350 PRO HXT H N N 351 SEP N N N N 352 SEP CA C N S 353 SEP CB C N N 354 SEP OG O N N 355 SEP C C N N 356 SEP O O N N 357 SEP OXT O N N 358 SEP P P N N 359 SEP O1P O N N 360 SEP O2P O N N 361 SEP O3P O N N 362 SEP H H N N 363 SEP H2 H N N 364 SEP HA H N N 365 SEP HB2 H N N 366 SEP HB3 H N N 367 SEP HXT H N N 368 SEP HOP2 H N N 369 SEP HOP3 H N N 370 SER N N N N 371 SER CA C N S 372 SER C C N N 373 SER O O N N 374 SER CB C N N 375 SER OG O N N 376 SER OXT O N N 377 SER H H N N 378 SER H2 H N N 379 SER HA H N N 380 SER HB2 H N N 381 SER HB3 H N N 382 SER HG H N N 383 SER HXT H N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TRP N N N N 402 TRP CA C N S 403 TRP C C N N 404 TRP O O N N 405 TRP CB C N N 406 TRP CG C Y N 407 TRP CD1 C Y N 408 TRP CD2 C Y N 409 TRP NE1 N Y N 410 TRP CE2 C Y N 411 TRP CE3 C Y N 412 TRP CZ2 C Y N 413 TRP CZ3 C Y N 414 TRP CH2 C Y N 415 TRP OXT O N N 416 TRP H H N N 417 TRP H2 H N N 418 TRP HA H N N 419 TRP HB2 H N N 420 TRP HB3 H N N 421 TRP HD1 H N N 422 TRP HE1 H N N 423 TRP HE3 H N N 424 TRP HZ2 H N N 425 TRP HZ3 H N N 426 TRP HH2 H N N 427 TRP HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 VAL N N N N 453 VAL CA C N S 454 VAL C C N N 455 VAL O O N N 456 VAL CB C N N 457 VAL CG1 C N N 458 VAL CG2 C N N 459 VAL OXT O N N 460 VAL H H N N 461 VAL H2 H N N 462 VAL HA H N N 463 VAL HB H N N 464 VAL HG11 H N N 465 VAL HG12 H N N 466 VAL HG13 H N N 467 VAL HG21 H N N 468 VAL HG22 H N N 469 VAL HG23 H N N 470 VAL HXT H N N 471 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CME N CA sing N N 70 CME N H sing N N 71 CME N H2 sing N N 72 CME CA CB sing N N 73 CME CA C sing N N 74 CME CA HA sing N N 75 CME CB SG sing N N 76 CME CB HB2 sing N N 77 CME CB HB3 sing N N 78 CME SG SD sing N N 79 CME SD CE sing N N 80 CME CE CZ sing N N 81 CME CE HE2 sing N N 82 CME CE HE3 sing N N 83 CME CZ OH sing N N 84 CME CZ HZ2 sing N N 85 CME CZ HZ3 sing N N 86 CME OH HH sing N N 87 CME C O doub N N 88 CME C OXT sing N N 89 CME OXT HXT sing N N 90 CYS N CA sing N N 91 CYS N H sing N N 92 CYS N H2 sing N N 93 CYS CA C sing N N 94 CYS CA CB sing N N 95 CYS CA HA sing N N 96 CYS C O doub N N 97 CYS C OXT sing N N 98 CYS CB SG sing N N 99 CYS CB HB2 sing N N 100 CYS CB HB3 sing N N 101 CYS SG HG sing N N 102 CYS OXT HXT sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HIS N CA sing N N 150 HIS N H sing N N 151 HIS N H2 sing N N 152 HIS CA C sing N N 153 HIS CA CB sing N N 154 HIS CA HA sing N N 155 HIS C O doub N N 156 HIS C OXT sing N N 157 HIS CB CG sing N N 158 HIS CB HB2 sing N N 159 HIS CB HB3 sing N N 160 HIS CG ND1 sing Y N 161 HIS CG CD2 doub Y N 162 HIS ND1 CE1 doub Y N 163 HIS ND1 HD1 sing N N 164 HIS CD2 NE2 sing Y N 165 HIS CD2 HD2 sing N N 166 HIS CE1 NE2 sing Y N 167 HIS CE1 HE1 sing N N 168 HIS NE2 HE2 sing N N 169 HIS OXT HXT sing N N 170 HOH O H1 sing N N 171 HOH O H2 sing N N 172 ILE N CA sing N N 173 ILE N H sing N N 174 ILE N H2 sing N N 175 ILE CA C sing N N 176 ILE CA CB sing N N 177 ILE CA HA sing N N 178 ILE C O doub N N 179 ILE C OXT sing N N 180 ILE CB CG1 sing N N 181 ILE CB CG2 sing N N 182 ILE CB HB sing N N 183 ILE CG1 CD1 sing N N 184 ILE CG1 HG12 sing N N 185 ILE CG1 HG13 sing N N 186 ILE CG2 HG21 sing N N 187 ILE CG2 HG22 sing N N 188 ILE CG2 HG23 sing N N 189 ILE CD1 HD11 sing N N 190 ILE CD1 HD12 sing N N 191 ILE CD1 HD13 sing N N 192 ILE OXT HXT sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LY2 N14 C15 sing N N 215 LY2 N14 C19 sing N N 216 LY2 N14 C11 sing N N 217 LY2 C15 C16 sing N N 218 LY2 C15 H151 sing N N 219 LY2 C15 H152 sing N N 220 LY2 C19 C18 sing N N 221 LY2 C19 H191 sing N N 222 LY2 C19 H192 sing N N 223 LY2 C11 O12 sing Y N 224 LY2 C11 C10 doub Y N 225 LY2 C16 O17 sing N N 226 LY2 C16 H161 sing N N 227 LY2 C16 H162 sing N N 228 LY2 O17 C18 sing N N 229 LY2 C18 H181 sing N N 230 LY2 C18 H182 sing N N 231 LY2 C1 C2 doub Y N 232 LY2 C1 C6 sing Y N 233 LY2 C1 HC1 sing N N 234 LY2 C2 C3 sing Y N 235 LY2 C2 HC2 sing N N 236 LY2 C6 C5 doub Y N 237 LY2 C6 HC6 sing N N 238 LY2 C3 C4 doub Y N 239 LY2 C3 C9 sing Y N 240 LY2 C4 C5 sing Y N 241 LY2 C4 O12 sing Y N 242 LY2 C9 C10 sing Y N 243 LY2 C9 O13 doub N N 244 LY2 C5 C20 sing Y N 245 LY2 C20 C25 doub Y N 246 LY2 C20 C21 sing Y N 247 LY2 C25 C24 sing Y N 248 LY2 C25 H25 sing N N 249 LY2 C24 C23 doub Y N 250 LY2 C24 H24 sing N N 251 LY2 C21 C22 doub Y N 252 LY2 C21 H21 sing N N 253 LY2 C22 C23 sing Y N 254 LY2 C22 H22 sing N N 255 LY2 C23 H23 sing N N 256 LY2 C10 H10 sing N N 257 LYS N CA sing N N 258 LYS N H sing N N 259 LYS N H2 sing N N 260 LYS CA C sing N N 261 LYS CA CB sing N N 262 LYS CA HA sing N N 263 LYS C O doub N N 264 LYS C OXT sing N N 265 LYS CB CG sing N N 266 LYS CB HB2 sing N N 267 LYS CB HB3 sing N N 268 LYS CG CD sing N N 269 LYS CG HG2 sing N N 270 LYS CG HG3 sing N N 271 LYS CD CE sing N N 272 LYS CD HD2 sing N N 273 LYS CD HD3 sing N N 274 LYS CE NZ sing N N 275 LYS CE HE2 sing N N 276 LYS CE HE3 sing N N 277 LYS NZ HZ1 sing N N 278 LYS NZ HZ2 sing N N 279 LYS NZ HZ3 sing N N 280 LYS OXT HXT sing N N 281 MET N CA sing N N 282 MET N H sing N N 283 MET N H2 sing N N 284 MET CA C sing N N 285 MET CA CB sing N N 286 MET CA HA sing N N 287 MET C O doub N N 288 MET C OXT sing N N 289 MET CB CG sing N N 290 MET CB HB2 sing N N 291 MET CB HB3 sing N N 292 MET CG SD sing N N 293 MET CG HG2 sing N N 294 MET CG HG3 sing N N 295 MET SD CE sing N N 296 MET CE HE1 sing N N 297 MET CE HE2 sing N N 298 MET CE HE3 sing N N 299 MET OXT HXT sing N N 300 PHE N CA sing N N 301 PHE N H sing N N 302 PHE N H2 sing N N 303 PHE CA C sing N N 304 PHE CA CB sing N N 305 PHE CA HA sing N N 306 PHE C O doub N N 307 PHE C OXT sing N N 308 PHE CB CG sing N N 309 PHE CB HB2 sing N N 310 PHE CB HB3 sing N N 311 PHE CG CD1 doub Y N 312 PHE CG CD2 sing Y N 313 PHE CD1 CE1 sing Y N 314 PHE CD1 HD1 sing N N 315 PHE CD2 CE2 doub Y N 316 PHE CD2 HD2 sing N N 317 PHE CE1 CZ doub Y N 318 PHE CE1 HE1 sing N N 319 PHE CE2 CZ sing Y N 320 PHE CE2 HE2 sing N N 321 PHE CZ HZ sing N N 322 PHE OXT HXT sing N N 323 PRO N CA sing N N 324 PRO N CD sing N N 325 PRO N H sing N N 326 PRO CA C sing N N 327 PRO CA CB sing N N 328 PRO CA HA sing N N 329 PRO C O doub N N 330 PRO C OXT sing N N 331 PRO CB CG sing N N 332 PRO CB HB2 sing N N 333 PRO CB HB3 sing N N 334 PRO CG CD sing N N 335 PRO CG HG2 sing N N 336 PRO CG HG3 sing N N 337 PRO CD HD2 sing N N 338 PRO CD HD3 sing N N 339 PRO OXT HXT sing N N 340 SEP N CA sing N N 341 SEP N H sing N N 342 SEP N H2 sing N N 343 SEP CA CB sing N N 344 SEP CA C sing N N 345 SEP CA HA sing N N 346 SEP CB OG sing N N 347 SEP CB HB2 sing N N 348 SEP CB HB3 sing N N 349 SEP OG P sing N N 350 SEP C O doub N N 351 SEP C OXT sing N N 352 SEP OXT HXT sing N N 353 SEP P O1P doub N N 354 SEP P O2P sing N N 355 SEP P O3P sing N N 356 SEP O2P HOP2 sing N N 357 SEP O3P HOP3 sing N N 358 SER N CA sing N N 359 SER N H sing N N 360 SER N H2 sing N N 361 SER CA C sing N N 362 SER CA CB sing N N 363 SER CA HA sing N N 364 SER C O doub N N 365 SER C OXT sing N N 366 SER CB OG sing N N 367 SER CB HB2 sing N N 368 SER CB HB3 sing N N 369 SER OG HG sing N N 370 SER OXT HXT sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # _atom_sites.entry_id 1YI3 _atom_sites.fract_transf_matrix[1][1] 0.010241 _atom_sites.fract_transf_matrix[1][2] 0.005913 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011825 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012388 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_