data_1YL6 # _entry.id 1YL6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YL6 pdb_00001yl6 10.2210/pdb1yl6/pdb RCSB RCSB031642 ? ? WWPDB D_1000031642 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1YL5 'CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DIHYDRODIPICOLINATE REDUCTASE (RV2773C) (CRYSTAL FORM A)' unspecified PDB 1YL7 'CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DIHYDRODIPICOLINATE REDUCTASE (RV2773C) IN COMPLEX WITH NADH (CRYSTAL FORM C)' unspecified TargetDB Rv2773c . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YL6 _pdbx_database_status.recvd_initial_deposition_date 2005-01-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Janowski, R.' 1 'Kefala, G.' 2 'Weiss, M.S.' 3 'TB Structural Genomics Consortium (TBSGC)' 4 # _citation.id primary _citation.title 'The structure of dihydrodipicolinate reductase (DapB) from Mycobacterium tuberculosis in three crystal forms.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 66 _citation.page_first 61 _citation.page_last 72 _citation.year 2010 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20057050 _citation.pdbx_database_id_DOI 10.1107/S0907444909043960 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Janowski, R.' 1 ? primary 'Kefala, G.' 2 ? primary 'Weiss, M.S.' 3 ? # _cell.entry_id 1YL6 _cell.length_a 87.13 _cell.length_b 89.46 _cell.length_c 77.52 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1YL6 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dihydrodipicolinate reductase' 25703.240 2 1.3.1.26 ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 water nat water 18.015 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name DHPR # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFT AERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPP NPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEP LLDLH ; _entity_poly.pdbx_seq_one_letter_code_can ;ARVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFT AERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPP NPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEP LLDLH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier Rv2773c # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ARG n 1 3 VAL n 1 4 GLY n 1 5 VAL n 1 6 LEU n 1 7 GLY n 1 8 ALA n 1 9 LYS n 1 10 GLY n 1 11 LYS n 1 12 VAL n 1 13 GLY n 1 14 ALA n 1 15 THR n 1 16 MET n 1 17 VAL n 1 18 ARG n 1 19 ALA n 1 20 VAL n 1 21 ALA n 1 22 ALA n 1 23 ALA n 1 24 ASP n 1 25 ASP n 1 26 LEU n 1 27 THR n 1 28 LEU n 1 29 SER n 1 30 ALA n 1 31 GLU n 1 32 LEU n 1 33 ASP n 1 34 ALA n 1 35 GLY n 1 36 ASP n 1 37 PRO n 1 38 LEU n 1 39 SER n 1 40 LEU n 1 41 LEU n 1 42 THR n 1 43 ASP n 1 44 GLY n 1 45 ASN n 1 46 THR n 1 47 GLU n 1 48 VAL n 1 49 VAL n 1 50 ILE n 1 51 ASP n 1 52 PHE n 1 53 THR n 1 54 HIS n 1 55 PRO n 1 56 ASP n 1 57 VAL n 1 58 VAL n 1 59 MET n 1 60 GLY n 1 61 ASN n 1 62 LEU n 1 63 GLU n 1 64 PHE n 1 65 LEU n 1 66 ILE n 1 67 ASP n 1 68 ASN n 1 69 GLY n 1 70 ILE n 1 71 HIS n 1 72 ALA n 1 73 VAL n 1 74 VAL n 1 75 GLY n 1 76 THR n 1 77 THR n 1 78 GLY n 1 79 PHE n 1 80 THR n 1 81 ALA n 1 82 GLU n 1 83 ARG n 1 84 PHE n 1 85 GLN n 1 86 GLN n 1 87 VAL n 1 88 GLU n 1 89 SER n 1 90 TRP n 1 91 LEU n 1 92 VAL n 1 93 ALA n 1 94 LYS n 1 95 PRO n 1 96 ASN n 1 97 THR n 1 98 SER n 1 99 VAL n 1 100 LEU n 1 101 ILE n 1 102 ALA n 1 103 PRO n 1 104 ASN n 1 105 PHE n 1 106 ALA n 1 107 ILE n 1 108 GLY n 1 109 ALA n 1 110 VAL n 1 111 LEU n 1 112 SER n 1 113 MET n 1 114 HIS n 1 115 PHE n 1 116 ALA n 1 117 LYS n 1 118 GLN n 1 119 ALA n 1 120 ALA n 1 121 ARG n 1 122 PHE n 1 123 PHE n 1 124 ASP n 1 125 SER n 1 126 ALA n 1 127 GLU n 1 128 VAL n 1 129 ILE n 1 130 GLU n 1 131 LEU n 1 132 HIS n 1 133 HIS n 1 134 PRO n 1 135 HIS n 1 136 LYS n 1 137 ALA n 1 138 ASP n 1 139 ALA n 1 140 PRO n 1 141 SER n 1 142 GLY n 1 143 THR n 1 144 ALA n 1 145 ALA n 1 146 ARG n 1 147 THR n 1 148 ALA n 1 149 LYS n 1 150 LEU n 1 151 ILE n 1 152 ALA n 1 153 GLU n 1 154 ALA n 1 155 ARG n 1 156 LYS n 1 157 GLY n 1 158 LEU n 1 159 PRO n 1 160 PRO n 1 161 ASN n 1 162 PRO n 1 163 ASP n 1 164 ALA n 1 165 THR n 1 166 SER n 1 167 THR n 1 168 SER n 1 169 LEU n 1 170 PRO n 1 171 GLY n 1 172 ALA n 1 173 ARG n 1 174 GLY n 1 175 ALA n 1 176 ASP n 1 177 VAL n 1 178 ASP n 1 179 GLY n 1 180 ILE n 1 181 PRO n 1 182 VAL n 1 183 HIS n 1 184 ALA n 1 185 VAL n 1 186 ARG n 1 187 LEU n 1 188 ALA n 1 189 GLY n 1 190 LEU n 1 191 VAL n 1 192 ALA n 1 193 HIS n 1 194 GLN n 1 195 GLU n 1 196 VAL n 1 197 LEU n 1 198 PHE n 1 199 GLY n 1 200 THR n 1 201 GLU n 1 202 GLY n 1 203 GLU n 1 204 THR n 1 205 LEU n 1 206 THR n 1 207 ILE n 1 208 ARG n 1 209 HIS n 1 210 ASP n 1 211 SER n 1 212 LEU n 1 213 ASP n 1 214 ARG n 1 215 THR n 1 216 SER n 1 217 PHE n 1 218 VAL n 1 219 PRO n 1 220 GLY n 1 221 VAL n 1 222 LEU n 1 223 LEU n 1 224 ALA n 1 225 VAL n 1 226 ARG n 1 227 ARG n 1 228 ILE n 1 229 ALA n 1 230 GLU n 1 231 ARG n 1 232 PRO n 1 233 GLY n 1 234 LEU n 1 235 THR n 1 236 VAL n 1 237 GLY n 1 238 LEU n 1 239 GLU n 1 240 PRO n 1 241 LEU n 1 242 LEU n 1 243 ASP n 1 244 LEU n 1 245 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Mycobacterium _entity_src_gen.pdbx_gene_src_gene dapB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)RP' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET22B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DAPB_MYCTU _struct_ref.pdbx_db_accession P72024 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTA ERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPN PDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPL LDLH ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YL6 A 2 ? 245 ? P72024 2 ? 245 ? 2 245 2 1 1YL6 B 2 ? 245 ? P72024 2 ? 245 ? 2 245 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YL6 ALA A 1 ? UNP P72024 ? ? 'cloning artifact' 1 1 2 1YL6 ALA B 1 ? UNP P72024 ? ? 'cloning artifact' 1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YL6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.9 _exptl_crystal.density_percent_sol 57.8 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '100 mM Tris/HCl, 24 % PEG 3350, 140 mM MgCl2, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-10-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal (Si111, Si220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ELETTRA BEAMLINE 5.2R' _diffrn_source.pdbx_synchrotron_site ELETTRA _diffrn_source.pdbx_synchrotron_beamline 5.2R _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 1YL6 _reflns.observed_criterion_sigma_F -3 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 2.9 _reflns.d_resolution_low 99 _reflns.number_all 13831 _reflns.number_obs 13831 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 23.9 _reflns.B_iso_Wilson_estimate 48.8 _reflns.pdbx_redundancy 31.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.494 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 657 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1YL6 _refine.ls_number_reflns_obs 12552 _refine.ls_number_reflns_all 12552 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 98.90 _refine.ls_R_factor_obs 0.20415 _refine.ls_R_factor_all 0.20415 _refine.ls_R_factor_R_work 0.19883 _refine.ls_R_factor_R_free 0.25689 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.0 _refine.ls_number_reflns_R_free 1237 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.B_iso_mean 59.521 _refine.aniso_B[1][1] 5.16 _refine.aniso_B[2][2] 1.52 _refine.aniso_B[3][3] -6.68 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'TLS REFINEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1P9L' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.415 _refine.overall_SU_ML 0.330 _refine.overall_SU_B 38.566 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3622 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 3626 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 3692 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.689 1.967 ? 5038 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.622 5.000 ? 488 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.649 23.562 ? 146 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.890 15.000 ? 566 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.087 15.000 ? 26 'X-RAY DIFFRACTION' ? r_chiral_restr 0.096 0.200 ? 608 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2794 'X-RAY DIFFRACTION' ? r_nbd_refined 0.241 0.200 ? 1695 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.319 0.200 ? 2563 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.131 0.200 ? 112 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.250 0.200 ? 66 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.100 0.200 ? 7 'X-RAY DIFFRACTION' ? r_mcbond_it 0.739 1.500 ? 2474 'X-RAY DIFFRACTION' ? r_mcangle_it 1.367 2.500 ? 3908 'X-RAY DIFFRACTION' ? r_scbond_it 3.915 5.000 ? 1296 'X-RAY DIFFRACTION' ? r_scangle_it 6.644 10.000 ? 1130 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'tight positional' A 812 0.05 0.05 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 'medium positional' A 710 0.35 0.50 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? 1 'tight thermal' A 812 0.40 1.50 1 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? 1 'medium thermal' A 710 1.15 2.50 1 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.900 _refine_ls_shell.d_res_low 3.055 _refine_ls_shell.number_reflns_R_work 1780 _refine_ls_shell.R_factor_R_work 0.257 _refine_ls_shell.percent_reflns_obs 99.44 _refine_ls_shell.R_factor_R_free 0.38 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 182 _refine_ls_shell.number_reflns_obs 1780 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A LEU 40 . A LEU 242 . A LEU 40 A LEU 242 2 ? 1 2 1 B LEU 40 . B LEU 242 . B LEU 40 B LEU 242 2 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 1YL6 _struct.title 'crystal structure of Mycobacterium tuberculosis dihydrodipicolinate reductase (Rv2773c) (crystal form B)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YL6 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;lysine biosynthesis, dihydrodipicolinate, reductase, NADH, Structural Genomics, PSI, Protein Structure Initiative, TB Structural Genomics Consortium, TBSGC, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ;THE SECOND PART OF THE BIOLOGICAL ASSEMBLY (TETRAMER) IS GENERATED BY THE TWO FOLD AXIS: 1/2, 1/2, Z. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 10 ? ALA A 23 ? GLY A 10 ALA A 23 1 ? 14 HELX_P HELX_P2 2 SER A 39 ? GLY A 44 ? SER A 39 GLY A 44 1 ? 6 HELX_P HELX_P3 3 HIS A 54 ? ASN A 68 ? HIS A 54 ASN A 68 1 ? 15 HELX_P HELX_P4 4 THR A 80 ? LYS A 94 ? THR A 80 LYS A 94 1 ? 15 HELX_P HELX_P5 5 ALA A 106 ? ALA A 120 ? ALA A 106 ALA A 120 1 ? 15 HELX_P HELX_P6 6 ARG A 121 ? PHE A 123 ? ARG A 121 PHE A 123 5 ? 3 HELX_P HELX_P7 7 SER A 141 ? ARG A 155 ? SER A 141 ARG A 155 1 ? 15 HELX_P HELX_P8 8 PHE A 217 ? ILE A 228 ? PHE A 217 ILE A 228 1 ? 12 HELX_P HELX_P9 9 ALA A 229 ? ARG A 231 ? ALA A 229 ARG A 231 5 ? 3 HELX_P HELX_P10 10 LEU A 238 ? ASP A 243 ? LEU A 238 ASP A 243 5 ? 6 HELX_P HELX_P11 11 GLY B 10 ? ALA B 23 ? GLY B 10 ALA B 23 1 ? 14 HELX_P HELX_P12 12 LEU B 38 ? GLY B 44 ? LEU B 38 GLY B 44 1 ? 7 HELX_P HELX_P13 13 HIS B 54 ? ASN B 68 ? HIS B 54 ASN B 68 1 ? 15 HELX_P HELX_P14 14 THR B 80 ? LYS B 94 ? THR B 80 LYS B 94 1 ? 15 HELX_P HELX_P15 15 ALA B 106 ? ALA B 120 ? ALA B 106 ALA B 120 1 ? 15 HELX_P HELX_P16 16 ARG B 121 ? PHE B 123 ? ARG B 121 PHE B 123 5 ? 3 HELX_P HELX_P17 17 SER B 141 ? ARG B 155 ? SER B 141 ARG B 155 1 ? 15 HELX_P HELX_P18 18 PHE B 217 ? ILE B 228 ? PHE B 217 ILE B 228 1 ? 12 HELX_P HELX_P19 19 ALA B 229 ? ARG B 231 ? ALA B 229 ARG B 231 5 ? 3 HELX_P HELX_P20 20 LEU B 238 ? ASP B 243 ? LEU B 238 ASP B 243 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A VAL 20 O ? ? ? 1_555 C MG . MG ? ? A VAL 20 A MG 246 1_555 ? ? ? ? ? ? ? 2.929 ? ? metalc2 metalc ? ? A ALA 21 O ? ? ? 1_555 C MG . MG ? ? A ALA 21 A MG 246 1_555 ? ? ? ? ? ? ? 2.797 ? ? metalc3 metalc ? ? A ALA 23 O ? ? ? 1_555 C MG . MG ? ? A ALA 23 A MG 246 1_555 ? ? ? ? ? ? ? 2.484 ? ? metalc4 metalc ? ? A LEU 26 O ? ? ? 1_555 C MG . MG ? ? A LEU 26 A MG 246 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc5 metalc ? ? B VAL 20 O ? ? ? 1_555 D MG . MG ? ? B VAL 20 B MG 246 1_555 ? ? ? ? ? ? ? 2.744 ? ? metalc6 metalc ? ? B ALA 21 O ? ? ? 1_555 D MG . MG ? ? B ALA 21 B MG 246 1_555 ? ? ? ? ? ? ? 2.996 ? ? metalc7 metalc ? ? B ALA 23 O ? ? ? 1_555 D MG . MG ? ? B ALA 23 B MG 246 1_555 ? ? ? ? ? ? ? 2.620 ? ? metalc8 metalc ? ? B LEU 26 O ? ? ? 1_555 D MG . MG ? ? B LEU 26 B MG 246 1_555 ? ? ? ? ? ? ? 2.170 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 139 A . ? ALA 139 A PRO 140 A ? PRO 140 A 1 6.07 2 ALA 139 B . ? ALA 139 B PRO 140 B ? PRO 140 B 1 4.53 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 9 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel C 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 27 ? GLU A 31 ? THR A 27 GLU A 31 A 2 ARG A 2 ? VAL A 5 ? ARG A 2 VAL A 5 A 3 VAL A 48 ? ASP A 51 ? VAL A 48 ASP A 51 A 4 HIS A 71 ? VAL A 74 ? HIS A 71 VAL A 74 A 5 SER A 98 ? ILE A 101 ? SER A 98 ILE A 101 A 6 GLY A 233 ? VAL A 236 ? GLY A 233 VAL A 236 B 1 ALA A 175 ? VAL A 177 ? ALA A 175 VAL A 177 B 2 ILE A 180 ? ARG A 186 ? ILE A 180 ARG A 186 B 3 SER A 125 ? HIS A 132 ? SER A 125 HIS A 132 B 4 ALA A 192 ? THR A 200 ? ALA A 192 THR A 200 B 5 GLU A 203 ? SER A 211 ? GLU A 203 SER A 211 B 6 GLU B 203 ? SER B 211 ? GLU B 203 SER B 211 B 7 ALA B 192 ? THR B 200 ? ALA B 192 THR B 200 B 8 SER B 125 ? HIS B 132 ? SER B 125 HIS B 132 B 9 VAL B 182 ? ARG B 186 ? VAL B 182 ARG B 186 C 1 THR B 27 ? LEU B 32 ? THR B 27 LEU B 32 C 2 ARG B 2 ? LEU B 6 ? ARG B 2 LEU B 6 C 3 VAL B 48 ? ASP B 51 ? VAL B 48 ASP B 51 C 4 HIS B 71 ? VAL B 74 ? HIS B 71 VAL B 74 C 5 SER B 98 ? ILE B 101 ? SER B 98 ILE B 101 C 6 GLY B 233 ? VAL B 236 ? GLY B 233 VAL B 236 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 29 ? O SER A 29 N VAL A 3 ? N VAL A 3 A 2 3 N GLY A 4 ? N GLY A 4 O VAL A 48 ? O VAL A 48 A 3 4 N ASP A 51 ? N ASP A 51 O VAL A 73 ? O VAL A 73 A 4 5 N ALA A 72 ? N ALA A 72 O LEU A 100 ? O LEU A 100 A 5 6 N VAL A 99 ? N VAL A 99 O THR A 235 ? O THR A 235 B 1 2 N ALA A 175 ? N ALA A 175 O VAL A 182 ? O VAL A 182 B 2 3 O VAL A 185 ? O VAL A 185 N GLU A 130 ? N GLU A 130 B 3 4 N ILE A 129 ? N ILE A 129 O GLU A 195 ? O GLU A 195 B 4 5 N ALA A 192 ? N ALA A 192 O SER A 211 ? O SER A 211 B 5 6 N THR A 204 ? N THR A 204 O ASP B 210 ? O ASP B 210 B 6 7 O SER B 211 ? O SER B 211 N ALA B 192 ? N ALA B 192 B 7 8 O GLU B 195 ? O GLU B 195 N ILE B 129 ? N ILE B 129 B 8 9 N GLU B 130 ? N GLU B 130 O VAL B 185 ? O VAL B 185 C 1 2 O SER B 29 ? O SER B 29 N VAL B 3 ? N VAL B 3 C 2 3 N GLY B 4 ? N GLY B 4 O VAL B 48 ? O VAL B 48 C 3 4 N VAL B 49 ? N VAL B 49 O VAL B 73 ? O VAL B 73 C 4 5 N VAL B 74 ? N VAL B 74 O LEU B 100 ? O LEU B 100 C 5 6 N VAL B 99 ? N VAL B 99 O THR B 235 ? O THR B 235 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 246 ? 4 'BINDING SITE FOR RESIDUE MG A 246' AC2 Software B MG 246 ? 4 'BINDING SITE FOR RESIDUE MG B 246' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 VAL A 20 ? VAL A 20 . ? 1_555 ? 2 AC1 4 ALA A 21 ? ALA A 21 . ? 1_555 ? 3 AC1 4 ALA A 23 ? ALA A 23 . ? 1_555 ? 4 AC1 4 LEU A 26 ? LEU A 26 . ? 1_555 ? 5 AC2 4 VAL B 20 ? VAL B 20 . ? 1_555 ? 6 AC2 4 ALA B 21 ? ALA B 21 . ? 1_555 ? 7 AC2 4 ALA B 23 ? ALA B 23 . ? 1_555 ? 8 AC2 4 LEU B 26 ? LEU B 26 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YL6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YL6 _atom_sites.fract_transf_matrix[1][1] 0.011477 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011178 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012900 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 HIS 71 71 71 HIS HIS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 TRP 90 90 90 TRP TRP A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 MET 113 113 113 MET MET A . n A 1 114 HIS 114 114 114 HIS HIS A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 HIS 132 132 132 HIS HIS A . n A 1 133 HIS 133 133 133 HIS HIS A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 PRO 162 162 162 PRO PRO A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 THR 165 165 165 THR THR A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 HIS 193 193 193 HIS HIS A . n A 1 194 GLN 194 194 194 GLN GLN A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 PHE 198 198 198 PHE PHE A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 ILE 207 207 207 ILE ILE A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 HIS 209 209 209 HIS HIS A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 ARG 214 214 214 ARG ARG A . n A 1 215 THR 215 215 215 THR THR A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 PHE 217 217 217 PHE PHE A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 PRO 219 219 219 PRO PRO A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 VAL 225 225 225 VAL VAL A . n A 1 226 ARG 226 226 226 ARG ARG A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 ILE 228 228 228 ILE ILE A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 GLU 230 230 230 GLU GLU A . n A 1 231 ARG 231 231 231 ARG ARG A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 GLY 233 233 233 GLY GLY A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 THR 235 235 235 THR THR A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 PRO 240 240 240 PRO PRO A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 ASP 243 243 243 ASP ASP A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 HIS 245 245 245 HIS HIS A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 GLY 4 4 4 GLY GLY B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 GLY 7 7 7 GLY GLY B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 MET 16 16 16 MET MET B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 THR 27 27 27 THR THR B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 GLU 31 31 31 GLU GLU B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 ASP 33 33 33 ASP ASP B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 ASP 36 36 36 ASP ASP B . n B 1 37 PRO 37 37 37 PRO PRO B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 SER 39 39 39 SER SER B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 LEU 41 41 41 LEU LEU B . n B 1 42 THR 42 42 42 THR THR B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 GLY 44 44 44 GLY GLY B . n B 1 45 ASN 45 45 45 ASN ASN B . n B 1 46 THR 46 46 46 THR THR B . n B 1 47 GLU 47 47 47 GLU GLU B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 ASP 51 51 51 ASP ASP B . n B 1 52 PHE 52 52 52 PHE PHE B . n B 1 53 THR 53 53 53 THR THR B . n B 1 54 HIS 54 54 54 HIS HIS B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 ASP 56 56 56 ASP ASP B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 VAL 58 58 58 VAL VAL B . n B 1 59 MET 59 59 59 MET MET B . n B 1 60 GLY 60 60 60 GLY GLY B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 LEU 65 65 65 LEU LEU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 ASN 68 68 68 ASN ASN B . n B 1 69 GLY 69 69 69 GLY GLY B . n B 1 70 ILE 70 70 70 ILE ILE B . n B 1 71 HIS 71 71 71 HIS HIS B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 VAL 73 73 73 VAL VAL B . n B 1 74 VAL 74 74 74 VAL VAL B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 THR 76 76 76 THR THR B . n B 1 77 THR 77 77 77 THR THR B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 ALA 81 81 81 ALA ALA B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 ARG 83 83 83 ARG ARG B . n B 1 84 PHE 84 84 84 PHE PHE B . n B 1 85 GLN 85 85 85 GLN GLN B . n B 1 86 GLN 86 86 86 GLN GLN B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 GLU 88 88 88 GLU GLU B . n B 1 89 SER 89 89 89 SER SER B . n B 1 90 TRP 90 90 90 TRP TRP B . n B 1 91 LEU 91 91 91 LEU LEU B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 ALA 93 93 93 ALA ALA B . n B 1 94 LYS 94 94 94 LYS LYS B . n B 1 95 PRO 95 95 95 PRO PRO B . n B 1 96 ASN 96 96 96 ASN ASN B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 SER 98 98 98 SER SER B . n B 1 99 VAL 99 99 99 VAL VAL B . n B 1 100 LEU 100 100 100 LEU LEU B . n B 1 101 ILE 101 101 101 ILE ILE B . n B 1 102 ALA 102 102 102 ALA ALA B . n B 1 103 PRO 103 103 103 PRO PRO B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 PHE 105 105 105 PHE PHE B . n B 1 106 ALA 106 106 106 ALA ALA B . n B 1 107 ILE 107 107 107 ILE ILE B . n B 1 108 GLY 108 108 108 GLY GLY B . n B 1 109 ALA 109 109 109 ALA ALA B . n B 1 110 VAL 110 110 110 VAL VAL B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 SER 112 112 112 SER SER B . n B 1 113 MET 113 113 113 MET MET B . n B 1 114 HIS 114 114 114 HIS HIS B . n B 1 115 PHE 115 115 115 PHE PHE B . n B 1 116 ALA 116 116 116 ALA ALA B . n B 1 117 LYS 117 117 117 LYS LYS B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 ALA 119 119 119 ALA ALA B . n B 1 120 ALA 120 120 120 ALA ALA B . n B 1 121 ARG 121 121 121 ARG ARG B . n B 1 122 PHE 122 122 122 PHE PHE B . n B 1 123 PHE 123 123 123 PHE PHE B . n B 1 124 ASP 124 124 124 ASP ASP B . n B 1 125 SER 125 125 125 SER SER B . n B 1 126 ALA 126 126 126 ALA ALA B . n B 1 127 GLU 127 127 127 GLU GLU B . n B 1 128 VAL 128 128 128 VAL VAL B . n B 1 129 ILE 129 129 129 ILE ILE B . n B 1 130 GLU 130 130 130 GLU GLU B . n B 1 131 LEU 131 131 131 LEU LEU B . n B 1 132 HIS 132 132 132 HIS HIS B . n B 1 133 HIS 133 133 133 HIS HIS B . n B 1 134 PRO 134 134 134 PRO PRO B . n B 1 135 HIS 135 135 135 HIS HIS B . n B 1 136 LYS 136 136 136 LYS LYS B . n B 1 137 ALA 137 137 137 ALA ALA B . n B 1 138 ASP 138 138 138 ASP ASP B . n B 1 139 ALA 139 139 139 ALA ALA B . n B 1 140 PRO 140 140 140 PRO PRO B . n B 1 141 SER 141 141 141 SER SER B . n B 1 142 GLY 142 142 142 GLY GLY B . n B 1 143 THR 143 143 143 THR THR B . n B 1 144 ALA 144 144 144 ALA ALA B . n B 1 145 ALA 145 145 145 ALA ALA B . n B 1 146 ARG 146 146 146 ARG ARG B . n B 1 147 THR 147 147 147 THR THR B . n B 1 148 ALA 148 148 148 ALA ALA B . n B 1 149 LYS 149 149 149 LYS LYS B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 ILE 151 151 151 ILE ILE B . n B 1 152 ALA 152 152 152 ALA ALA B . n B 1 153 GLU 153 153 153 GLU GLU B . n B 1 154 ALA 154 154 154 ALA ALA B . n B 1 155 ARG 155 155 155 ARG ARG B . n B 1 156 LYS 156 156 156 LYS LYS B . n B 1 157 GLY 157 157 157 GLY GLY B . n B 1 158 LEU 158 158 158 LEU LEU B . n B 1 159 PRO 159 159 159 PRO PRO B . n B 1 160 PRO 160 160 160 PRO PRO B . n B 1 161 ASN 161 161 161 ASN ASN B . n B 1 162 PRO 162 162 162 PRO PRO B . n B 1 163 ASP 163 163 163 ASP ASP B . n B 1 164 ALA 164 164 164 ALA ALA B . n B 1 165 THR 165 165 165 THR THR B . n B 1 166 SER 166 166 166 SER SER B . n B 1 167 THR 167 167 167 THR THR B . n B 1 168 SER 168 168 168 SER SER B . n B 1 169 LEU 169 169 169 LEU LEU B . n B 1 170 PRO 170 170 170 PRO PRO B . n B 1 171 GLY 171 171 171 GLY GLY B . n B 1 172 ALA 172 172 172 ALA ALA B . n B 1 173 ARG 173 173 173 ARG ARG B . n B 1 174 GLY 174 174 174 GLY GLY B . n B 1 175 ALA 175 175 175 ALA ALA B . n B 1 176 ASP 176 176 176 ASP ASP B . n B 1 177 VAL 177 177 177 VAL VAL B . n B 1 178 ASP 178 178 178 ASP ASP B . n B 1 179 GLY 179 179 179 GLY GLY B . n B 1 180 ILE 180 180 180 ILE ILE B . n B 1 181 PRO 181 181 181 PRO PRO B . n B 1 182 VAL 182 182 182 VAL VAL B . n B 1 183 HIS 183 183 183 HIS HIS B . n B 1 184 ALA 184 184 184 ALA ALA B . n B 1 185 VAL 185 185 185 VAL VAL B . n B 1 186 ARG 186 186 186 ARG ARG B . n B 1 187 LEU 187 187 187 LEU LEU B . n B 1 188 ALA 188 188 188 ALA ALA B . n B 1 189 GLY 189 189 189 GLY GLY B . n B 1 190 LEU 190 190 190 LEU LEU B . n B 1 191 VAL 191 191 191 VAL VAL B . n B 1 192 ALA 192 192 192 ALA ALA B . n B 1 193 HIS 193 193 193 HIS HIS B . n B 1 194 GLN 194 194 194 GLN GLN B . n B 1 195 GLU 195 195 195 GLU GLU B . n B 1 196 VAL 196 196 196 VAL VAL B . n B 1 197 LEU 197 197 197 LEU LEU B . n B 1 198 PHE 198 198 198 PHE PHE B . n B 1 199 GLY 199 199 199 GLY GLY B . n B 1 200 THR 200 200 200 THR THR B . n B 1 201 GLU 201 201 201 GLU GLU B . n B 1 202 GLY 202 202 202 GLY GLY B . n B 1 203 GLU 203 203 203 GLU GLU B . n B 1 204 THR 204 204 204 THR THR B . n B 1 205 LEU 205 205 205 LEU LEU B . n B 1 206 THR 206 206 206 THR THR B . n B 1 207 ILE 207 207 207 ILE ILE B . n B 1 208 ARG 208 208 208 ARG ARG B . n B 1 209 HIS 209 209 209 HIS HIS B . n B 1 210 ASP 210 210 210 ASP ASP B . n B 1 211 SER 211 211 211 SER SER B . n B 1 212 LEU 212 212 212 LEU LEU B . n B 1 213 ASP 213 213 213 ASP ASP B . n B 1 214 ARG 214 214 214 ARG ARG B . n B 1 215 THR 215 215 215 THR THR B . n B 1 216 SER 216 216 216 SER SER B . n B 1 217 PHE 217 217 217 PHE PHE B . n B 1 218 VAL 218 218 218 VAL VAL B . n B 1 219 PRO 219 219 219 PRO PRO B . n B 1 220 GLY 220 220 220 GLY GLY B . n B 1 221 VAL 221 221 221 VAL VAL B . n B 1 222 LEU 222 222 222 LEU LEU B . n B 1 223 LEU 223 223 223 LEU LEU B . n B 1 224 ALA 224 224 224 ALA ALA B . n B 1 225 VAL 225 225 225 VAL VAL B . n B 1 226 ARG 226 226 226 ARG ARG B . n B 1 227 ARG 227 227 227 ARG ARG B . n B 1 228 ILE 228 228 228 ILE ILE B . n B 1 229 ALA 229 229 229 ALA ALA B . n B 1 230 GLU 230 230 230 GLU GLU B . n B 1 231 ARG 231 231 231 ARG ARG B . n B 1 232 PRO 232 232 232 PRO PRO B . n B 1 233 GLY 233 233 233 GLY GLY B . n B 1 234 LEU 234 234 234 LEU LEU B . n B 1 235 THR 235 235 235 THR THR B . n B 1 236 VAL 236 236 236 VAL VAL B . n B 1 237 GLY 237 237 237 GLY GLY B . n B 1 238 LEU 238 238 238 LEU LEU B . n B 1 239 GLU 239 239 239 GLU GLU B . n B 1 240 PRO 240 240 240 PRO PRO B . n B 1 241 LEU 241 241 241 LEU LEU B . n B 1 242 LEU 242 242 242 LEU LEU B . n B 1 243 ASP 243 243 243 ASP ASP B . n B 1 244 LEU 244 244 244 LEU LEU B . n B 1 245 HIS 245 245 245 HIS HIS B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'TB Structural Genomics Consortium' _pdbx_SG_project.initial_of_center TBSGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 246 1 MG MG A . D 2 MG 1 246 2 MG MG B . E 3 HOH 1 247 2 HOH HOH A . F 3 HOH 1 247 1 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11950 ? 1 MORE -91 ? 1 'SSA (A^2)' 38840 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 87.1300000000 0.0000000000 -1.0000000000 0.0000000000 89.4600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A VAL 20 ? A VAL 20 ? 1_555 MG ? C MG . ? A MG 246 ? 1_555 O ? A ALA 21 ? A ALA 21 ? 1_555 63.3 ? 2 O ? A VAL 20 ? A VAL 20 ? 1_555 MG ? C MG . ? A MG 246 ? 1_555 O ? A ALA 23 ? A ALA 23 ? 1_555 74.1 ? 3 O ? A ALA 21 ? A ALA 21 ? 1_555 MG ? C MG . ? A MG 246 ? 1_555 O ? A ALA 23 ? A ALA 23 ? 1_555 74.9 ? 4 O ? A VAL 20 ? A VAL 20 ? 1_555 MG ? C MG . ? A MG 246 ? 1_555 O ? A LEU 26 ? A LEU 26 ? 1_555 81.7 ? 5 O ? A ALA 21 ? A ALA 21 ? 1_555 MG ? C MG . ? A MG 246 ? 1_555 O ? A LEU 26 ? A LEU 26 ? 1_555 140.0 ? 6 O ? A ALA 23 ? A ALA 23 ? 1_555 MG ? C MG . ? A MG 246 ? 1_555 O ? A LEU 26 ? A LEU 26 ? 1_555 77.4 ? 7 O ? B VAL 20 ? B VAL 20 ? 1_555 MG ? D MG . ? B MG 246 ? 1_555 O ? B ALA 21 ? B ALA 21 ? 1_555 65.9 ? 8 O ? B VAL 20 ? B VAL 20 ? 1_555 MG ? D MG . ? B MG 246 ? 1_555 O ? B ALA 23 ? B ALA 23 ? 1_555 83.9 ? 9 O ? B ALA 21 ? B ALA 21 ? 1_555 MG ? D MG . ? B MG 246 ? 1_555 O ? B ALA 23 ? B ALA 23 ? 1_555 90.1 ? 10 O ? B VAL 20 ? B VAL 20 ? 1_555 MG ? D MG . ? B MG 246 ? 1_555 O ? B LEU 26 ? B LEU 26 ? 1_555 89.8 ? 11 O ? B ALA 21 ? B ALA 21 ? 1_555 MG ? D MG . ? B MG 246 ? 1_555 O ? B LEU 26 ? B LEU 26 ? 1_555 155.7 ? 12 O ? B ALA 23 ? B ALA 23 ? 1_555 MG ? D MG . ? B MG 246 ? 1_555 O ? B LEU 26 ? B LEU 26 ? 1_555 86.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ncs_dom_lim 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.value' 14 5 'Structure model' '_struct_conn.pdbx_dist_value' 15 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 27 5 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 28 5 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 29 5 'Structure model' '_struct_ref_seq_dif.details' 30 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 63.0214 64.9711 4.6897 -0.1661 0.1264 -0.1415 -0.1688 -0.0728 0.0306 3.7206 3.8409 7.0423 0.6284 -0.0347 -1.3026 -0.1038 0.0371 0.1740 0.0511 -0.0839 -0.1135 -0.3089 0.9997 0.1877 'X-RAY DIFFRACTION' 2 ? refined 57.5480 47.8004 27.1461 -0.3442 -0.0607 -0.0444 0.1170 -0.0201 -0.1320 2.9075 4.1281 2.9535 1.4363 0.1891 0.1063 0.0840 0.2878 -0.1834 0.0168 0.3328 -0.6743 -0.1774 0.7125 -0.4168 'X-RAY DIFFRACTION' 3 ? refined 49.0405 72.1763 52.5786 0.0692 -0.3059 -0.2121 0.0699 0.0025 0.0336 3.5993 5.2191 8.2294 -0.6096 1.4562 -0.3044 -0.1148 -0.1044 -0.0880 0.0339 -0.1621 -0.0412 -1.4034 -0.2714 0.2770 'X-RAY DIFFRACTION' 4 ? refined 37.9995 57.8844 30.0157 -0.1772 -0.2659 0.0057 0.1851 0.1263 0.0916 3.8116 3.3834 3.7643 1.4552 0.2636 -0.2297 0.1798 0.1248 0.5977 0.3078 0.0256 0.6469 -0.6766 -0.3061 -0.2054 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 1 A 105 105 ? A A 'X-RAY DIFFRACTION' ? 2 1 A 218 218 A 245 245 ? A A 'X-RAY DIFFRACTION' ? 3 2 A 106 106 A 217 217 ? A A 'X-RAY DIFFRACTION' ? 4 3 B 1 1 B 105 105 ? B B 'X-RAY DIFFRACTION' ? 5 3 B 218 218 B 245 245 ? B B 'X-RAY DIFFRACTION' ? 6 4 B 106 106 B 217 217 ? B B 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MAR345 'data collection' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 30 ? ? -173.67 137.72 2 1 ALA A 34 ? ? -38.35 109.02 3 1 HIS A 54 ? ? -29.83 139.62 4 1 THR A 77 ? ? -100.36 -149.13 5 1 LYS A 156 ? ? -60.54 91.86 6 1 ASP A 163 ? ? -172.63 109.62 7 1 ASP A 178 ? ? 38.56 51.26 8 1 VAL A 191 ? ? -113.27 -98.04 9 1 ASP A 243 ? ? 36.08 73.45 10 1 HIS B 54 ? ? -30.18 139.86 11 1 THR B 77 ? ? -95.64 -151.53 12 1 LYS B 156 ? ? -67.70 93.20 13 1 ASP B 163 ? ? -174.47 110.64 14 1 VAL B 191 ? ? -110.19 -90.31 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 MG MG MG N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THR N N N N 291 THR CA C N S 292 THR C C N N 293 THR O O N N 294 THR CB C N R 295 THR OG1 O N N 296 THR CG2 C N N 297 THR OXT O N N 298 THR H H N N 299 THR H2 H N N 300 THR HA H N N 301 THR HB H N N 302 THR HG1 H N N 303 THR HG21 H N N 304 THR HG22 H N N 305 THR HG23 H N N 306 THR HXT H N N 307 TRP N N N N 308 TRP CA C N S 309 TRP C C N N 310 TRP O O N N 311 TRP CB C N N 312 TRP CG C Y N 313 TRP CD1 C Y N 314 TRP CD2 C Y N 315 TRP NE1 N Y N 316 TRP CE2 C Y N 317 TRP CE3 C Y N 318 TRP CZ2 C Y N 319 TRP CZ3 C Y N 320 TRP CH2 C Y N 321 TRP OXT O N N 322 TRP H H N N 323 TRP H2 H N N 324 TRP HA H N N 325 TRP HB2 H N N 326 TRP HB3 H N N 327 TRP HD1 H N N 328 TRP HE1 H N N 329 TRP HE3 H N N 330 TRP HZ2 H N N 331 TRP HZ3 H N N 332 TRP HH2 H N N 333 TRP HXT H N N 334 VAL N N N N 335 VAL CA C N S 336 VAL C C N N 337 VAL O O N N 338 VAL CB C N N 339 VAL CG1 C N N 340 VAL CG2 C N N 341 VAL OXT O N N 342 VAL H H N N 343 VAL H2 H N N 344 VAL HA H N N 345 VAL HB H N N 346 VAL HG11 H N N 347 VAL HG12 H N N 348 VAL HG13 H N N 349 VAL HG21 H N N 350 VAL HG22 H N N 351 VAL HG23 H N N 352 VAL HXT H N N 353 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 VAL N CA sing N N 321 VAL N H sing N N 322 VAL N H2 sing N N 323 VAL CA C sing N N 324 VAL CA CB sing N N 325 VAL CA HA sing N N 326 VAL C O doub N N 327 VAL C OXT sing N N 328 VAL CB CG1 sing N N 329 VAL CB CG2 sing N N 330 VAL CB HB sing N N 331 VAL CG1 HG11 sing N N 332 VAL CG1 HG12 sing N N 333 VAL CG1 HG13 sing N N 334 VAL CG2 HG21 sing N N 335 VAL CG2 HG22 sing N N 336 VAL CG2 HG23 sing N N 337 VAL OXT HXT sing N N 338 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1P9L _pdbx_initial_refinement_model.details 'PDB ENTRY 1P9L' #