HEADER UNKNOWN FUNCTION 19-JAN-05 1YLK TITLE CRYSTAL STRUCTURE OF RV1284 FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX TITLE 2 WITH THIOCYANATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN RV1284/MT1322; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV1284; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCRT7 KEYWDS RV1284, HOMODIMER, ALPHA/BETA-FOLD, STRUCTURAL PROTEOMICS IN EUROPE, KEYWDS 2 SPINE, STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.S.COVARRUBIAS,A.M.LARSSON,M.HOGBOM,J.LINDBERG,T.BERGFORS, AUTHOR 2 C.BJORKELID,S.L.MOWBRAY,T.UNGE,T.A.JONES,STRUCTURAL PROTEOMICS IN AUTHOR 3 EUROPE (SPINE) REVDAT 5 23-AUG-23 1YLK 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1YLK 1 VERSN REVDAT 3 24-FEB-09 1YLK 1 VERSN REVDAT 2 24-MAY-05 1YLK 1 JRNL REVDAT 1 08-MAR-05 1YLK 0 JRNL AUTH A.SUAREZ COVARRUBIAS,A.M.LARSSON,M.HOGBOM,J.LINDBERG, JRNL AUTH 2 T.BERGFORS,C.BJORKELID,S.L.MOWBRAY,T.UNGE,T.A.JONES JRNL TITL STRUCTURE AND FUNCTION OF CARBONIC ANHYDRASES FROM JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS. JRNL REF J.BIOL.CHEM. V. 280 18782 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15753099 JRNL DOI 10.1074/JBC.M414348200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 36658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1946 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2607 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.1960 REMARK 3 BIN FREE R VALUE SET COUNT : 160 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5084 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36000 REMARK 3 B22 (A**2) : -0.28000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.223 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.110 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.709 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5194 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7049 ; 1.305 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 648 ; 5.982 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 236 ;33.244 ;23.220 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 868 ;13.279 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;14.634 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 816 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3928 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2502 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3587 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 369 ; 0.130 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.030 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.217 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 24 ; 0.097 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3258 ; 0.523 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5297 ; 0.965 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1936 ; 1.788 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1752 ; 2.828 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1YLK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000031656. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : SAGITALLY FOCUSING GE(220) AND A REMARK 200 MULTILAYER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38625 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.43400 REMARK 200 R SYM FOR SHELL (I) : 0.39900 REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1G5C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM THIOCYANATE, POLYETHYLENE REMARK 280 GLYCOL 2000, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 77.03700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 78.47150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 77.03700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 78.47150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 77.03700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.47150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 77.03700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.47150 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 78.47150 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 78.47150 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 78.47150 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 78.47150 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 77.03700 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 77.03700 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 77.03700 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 50.08200 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 77.03700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -131.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 444 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 ALA A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 SER A 0 REMARK 465 MET B -8 REMARK 465 ALA B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 SER B 0 REMARK 465 MET C -8 REMARK 465 ALA C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 SER C 0 REMARK 465 MET D -8 REMARK 465 ALA D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 HIS D -1 REMARK 465 SER D 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 37 132.97 -38.57 REMARK 500 ASP B 37 131.12 -38.22 REMARK 500 ASP C 37 133.56 -38.90 REMARK 500 THR C 162 -80.30 -67.34 REMARK 500 ASP D 37 134.66 -39.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 35 SG REMARK 620 2 HIS A 88 NE2 111.5 REMARK 620 3 CYS A 91 SG 125.3 105.6 REMARK 620 4 HOH A 506 O 118.0 88.0 101.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 35 SG REMARK 620 2 HIS B 88 NE2 115.4 REMARK 620 3 CYS B 91 SG 123.3 106.2 REMARK 620 4 HOH B 502 O 110.6 89.9 106.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 35 SG REMARK 620 2 HIS C 88 NE2 111.6 REMARK 620 3 CYS C 91 SG 128.5 107.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 35 SG REMARK 620 2 HIS D 88 NE2 110.0 REMARK 620 3 CYS D 91 SG 126.8 108.9 REMARK 620 4 HOH D 405 O 112.1 92.6 100.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN C 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RV1284 RELATED DB: TARGETDB DBREF 1YLK A 2 163 UNP P64797 Y1284_MYCTU 2 163 DBREF 1YLK B 2 163 UNP P64797 Y1284_MYCTU 2 163 DBREF 1YLK C 2 163 UNP P64797 Y1284_MYCTU 2 163 DBREF 1YLK D 2 163 UNP P64797 Y1284_MYCTU 2 163 SEQADV 1YLK MET A -8 UNP P64797 CLONING ARTIFACT SEQADV 1YLK ALA A -7 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS A -6 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS A -5 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS A -4 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS A -3 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS A -2 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS A -1 UNP P64797 CLONING ARTIFACT SEQADV 1YLK SER A 0 UNP P64797 CLONING ARTIFACT SEQADV 1YLK GLY A 1 UNP P64797 CLONING ARTIFACT SEQADV 1YLK MET B -8 UNP P64797 CLONING ARTIFACT SEQADV 1YLK ALA B -7 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS B -6 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS B -5 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS B -4 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS B -3 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS B -2 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS B -1 UNP P64797 CLONING ARTIFACT SEQADV 1YLK SER B 0 UNP P64797 CLONING ARTIFACT SEQADV 1YLK GLY B 1 UNP P64797 CLONING ARTIFACT SEQADV 1YLK MET C -8 UNP P64797 CLONING ARTIFACT SEQADV 1YLK ALA C -7 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS C -6 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS C -5 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS C -4 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS C -3 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS C -2 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS C -1 UNP P64797 CLONING ARTIFACT SEQADV 1YLK SER C 0 UNP P64797 CLONING ARTIFACT SEQADV 1YLK GLY C 1 UNP P64797 CLONING ARTIFACT SEQADV 1YLK MET D -8 UNP P64797 CLONING ARTIFACT SEQADV 1YLK ALA D -7 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS D -6 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS D -5 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS D -4 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS D -3 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS D -2 UNP P64797 CLONING ARTIFACT SEQADV 1YLK HIS D -1 UNP P64797 CLONING ARTIFACT SEQADV 1YLK SER D 0 UNP P64797 CLONING ARTIFACT SEQADV 1YLK GLY D 1 UNP P64797 CLONING ARTIFACT SEQRES 1 A 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 A 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 A 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 A 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 A 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 A 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 A 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 A 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 A 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 A 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 A 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 A 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 A 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 A 172 VAL THR PRO SEQRES 1 B 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 B 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 B 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 B 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 B 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 B 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 B 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 B 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 B 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 B 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 B 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 B 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 B 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 B 172 VAL THR PRO SEQRES 1 C 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 C 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 C 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 C 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 C 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 C 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 C 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 C 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 C 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 C 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 C 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 C 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 C 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 C 172 VAL THR PRO SEQRES 1 D 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 D 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 D 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 D 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 D 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 D 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 D 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 D 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 D 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 D 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 D 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 D 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 D 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 D 172 VAL THR PRO HET ZN A 401 1 HET SCN A 502 3 HET SCN A 505 3 HET ZN B 402 1 HET SCN B 501 3 HET ZN C 403 1 HET SCN C 503 3 HET SCN C 504 3 HET ZN D 404 1 HETNAM ZN ZINC ION HETNAM SCN THIOCYANATE ION FORMUL 5 ZN 4(ZN 2+) FORMUL 6 SCN 5(C N S 1-) FORMUL 14 HOH *268(H2 O) HELIX 1 1 THR A 2 GLY A 17 1 16 HELIX 2 2 ASP A 41 GLY A 47 1 7 HELIX 3 3 THR A 64 LEU A 77 1 14 HELIX 4 4 CYS A 91 THR A 95 5 5 HELIX 5 5 THR A 97 GLY A 110 1 14 HELIX 6 6 ASP A 122 VAL A 136 1 15 HELIX 7 7 THR B 2 PHE B 18 1 17 HELIX 8 8 ASP B 41 GLY B 47 1 7 HELIX 9 9 THR B 64 LEU B 77 1 14 HELIX 10 10 CYS B 91 THR B 95 5 5 HELIX 11 11 THR B 97 GLY B 110 1 14 HELIX 12 12 ASP B 122 ASN B 137 1 16 HELIX 13 13 THR C 2 GLY C 17 1 16 HELIX 14 14 ASP C 41 GLY C 47 1 7 HELIX 15 15 THR C 64 LEU C 77 1 14 HELIX 16 16 CYS C 91 THR C 95 5 5 HELIX 17 17 THR C 97 GLY C 110 1 14 HELIX 18 18 ASP C 122 VAL C 136 1 15 HELIX 19 19 THR D 2 GLY D 17 1 16 HELIX 20 20 ASP D 41 LEU D 46 1 6 HELIX 21 21 THR D 64 LEU D 77 1 14 HELIX 22 22 CYS D 91 THR D 95 5 5 HELIX 23 23 THR D 97 GLY D 110 1 14 HELIX 24 24 ASP D 122 ASN D 137 1 16 SHEET 1 A 5 ALA A 53 ASN A 58 0 SHEET 2 A 5 ILE A 30 CYS A 35 1 N ILE A 32 O ILE A 56 SHEET 3 A 5 GLU A 82 HIS A 88 1 O ILE A 84 N VAL A 33 SHEET 4 A 5 SER A 145 PHE A 151 1 O PHE A 149 N LEU A 85 SHEET 5 A 5 LEU A 158 VAL A 161 -1 O VAL A 161 N GLY A 148 SHEET 1 B 5 ALA B 53 ASN B 58 0 SHEET 2 B 5 ILE B 30 CYS B 35 1 N ILE B 32 O ILE B 56 SHEET 3 B 5 GLU B 82 HIS B 88 1 O ILE B 84 N VAL B 33 SHEET 4 B 5 SER B 145 PHE B 151 1 O PHE B 149 N HIS B 87 SHEET 5 B 5 LEU B 158 VAL B 161 -1 O VAL B 161 N GLY B 148 SHEET 1 C 5 ALA C 53 ASN C 58 0 SHEET 2 C 5 ILE C 30 CYS C 35 1 N ILE C 32 O ILE C 56 SHEET 3 C 5 GLU C 82 HIS C 88 1 O LEU C 86 N VAL C 33 SHEET 4 C 5 SER C 145 PHE C 151 1 O SER C 145 N ILE C 83 SHEET 5 C 5 LEU C 158 VAL C 161 -1 O VAL C 161 N GLY C 148 SHEET 1 D 5 ALA D 53 ASN D 58 0 SHEET 2 D 5 ILE D 30 CYS D 35 1 N ILE D 32 O ILE D 56 SHEET 3 D 5 GLU D 82 HIS D 88 1 O LEU D 86 N VAL D 33 SHEET 4 D 5 SER D 145 PHE D 151 1 O PHE D 149 N HIS D 87 SHEET 5 D 5 LEU D 158 VAL D 161 -1 O VAL D 161 N GLY D 148 LINK SG CYS A 35 ZN ZN A 401 1555 1555 2.33 LINK NE2 HIS A 88 ZN ZN A 401 1555 1555 2.03 LINK SG CYS A 91 ZN ZN A 401 1555 1555 2.29 LINK ZN ZN A 401 O HOH A 506 1555 1555 2.24 LINK SG CYS B 35 ZN ZN B 402 1555 1555 2.41 LINK NE2 HIS B 88 ZN ZN B 402 1555 1555 2.03 LINK SG CYS B 91 ZN ZN B 402 1555 1555 2.31 LINK ZN ZN B 402 O HOH B 502 1555 1555 2.22 LINK SG CYS C 35 ZN ZN C 403 1555 1555 2.31 LINK NE2 HIS C 88 ZN ZN C 403 1555 1555 2.04 LINK SG CYS C 91 ZN ZN C 403 1555 1555 2.32 LINK SG CYS D 35 ZN ZN D 404 1555 1555 2.33 LINK NE2 HIS D 88 ZN ZN D 404 1555 1555 2.10 LINK SG CYS D 91 ZN ZN D 404 1555 1555 2.33 LINK ZN ZN D 404 O HOH D 405 1555 1555 2.30 CISPEP 1 GLY A 20 PRO A 21 0 4.26 CISPEP 2 GLY B 20 PRO B 21 0 4.03 CISPEP 3 GLY C 20 PRO C 21 0 5.88 CISPEP 4 GLY D 20 PRO D 21 0 2.88 SITE 1 AC1 4 CYS A 35 HIS A 88 CYS A 91 HOH A 506 SITE 1 AC2 4 CYS B 35 HIS B 88 CYS B 91 HOH B 502 SITE 1 AC3 3 CYS C 35 HIS C 88 CYS C 91 SITE 1 AC4 4 CYS D 35 HIS D 88 CYS D 91 HOH D 405 SITE 1 AC5 4 ASP A 37 HOH A 506 HIS B 54 LEU B 78 SITE 1 AC6 4 HIS A 54 LEU A 78 ASP B 37 HOH B 502 SITE 1 AC7 3 ASP C 37 HIS D 54 LEU D 78 SITE 1 AC8 4 HIS C 54 LEU C 78 ASP D 37 HOH D 405 SITE 1 AC9 4 PRO A 121 ASP A 122 GLU A 125 ASP A 126 CRYST1 100.164 154.074 156.943 90.00 90.00 90.00 F 2 2 2 64 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009984 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006490 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006372 0.00000