HEADER TRANSFERASE 19-JAN-05 1YLQ TITLE CRYSTAL STRUCTURE OF PUTATIVE NUCLEOTIDYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE NUCLEOTIDYLTRANSFERASE, HYPOTHETICAL PROTEIN COMPND 3 AF0614; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOTIDYLTRANSFERASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,A.JOACHIMIAK,T.SKARINA,A.SAVCHENKO,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 5 14-FEB-24 1YLQ 1 REMARK SEQADV REVDAT 4 13-JUL-11 1YLQ 1 VERSN REVDAT 3 24-FEB-09 1YLQ 1 VERSN REVDAT 2 01-NOV-05 1YLQ 1 JRNL REVDAT 1 01-MAR-05 1YLQ 0 JRNL AUTH C.CHANG,A.JOACHIMIAK,T.SKARINA,A.EDWARDS,A.SAVCHENKO JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN AF0614, PUTATIVE JRNL TITL 2 NUCLEOTIDYLTRANSFERASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 13974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 744 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.02 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 REFLECTION IN BIN (WORKING SET) : 969 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1564 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.216 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.191 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.883 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1604 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2140 ; 1.868 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 184 ; 8.987 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 80 ;35.881 ;23.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 324 ;17.296 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;20.626 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 222 ; 0.164 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1176 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 773 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1094 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 106 ; 0.195 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.268 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.119 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 955 ; 1.221 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1486 ; 1.865 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 750 ; 3.025 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 654 ; 4.468 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 16 A 20 REMARK 3 RESIDUE RANGE : A 35 A 40 REMARK 3 RESIDUE RANGE : A 66 A 71 REMARK 3 RESIDUE RANGE : A 87 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): -5.0760 11.7241 29.8362 REMARK 3 T TENSOR REMARK 3 T11: -0.0156 T22: -0.0832 REMARK 3 T33: -0.0897 T12: 0.0199 REMARK 3 T13: 0.0251 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 4.4636 L22: 4.0061 REMARK 3 L33: 5.6889 L12: -1.3775 REMARK 3 L13: 1.5625 L23: -1.6068 REMARK 3 S TENSOR REMARK 3 S11: -0.0117 S12: 0.2058 S13: -0.2956 REMARK 3 S21: -0.0570 S22: 0.0148 S23: -0.0058 REMARK 3 S31: -0.0240 S32: -0.1681 S33: -0.0031 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 16 B 20 REMARK 3 RESIDUE RANGE : B 35 B 40 REMARK 3 RESIDUE RANGE : B 66 B 71 REMARK 3 RESIDUE RANGE : B 87 B 88 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5482 22.9822 10.8335 REMARK 3 T TENSOR REMARK 3 T11: -0.0433 T22: -0.0486 REMARK 3 T33: -0.0854 T12: 0.0353 REMARK 3 T13: -0.0151 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 3.1788 L22: 4.5524 REMARK 3 L33: 5.6541 L12: -0.4016 REMARK 3 L13: 2.4409 L23: -2.5595 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: -0.0991 S13: 0.1162 REMARK 3 S21: 0.1348 S22: -0.0139 S23: 0.2027 REMARK 3 S31: 0.2194 S32: -0.1294 S33: -0.0275 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 65 REMARK 3 RESIDUE RANGE : A -1 A 15 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9746 11.3897 30.8115 REMARK 3 T TENSOR REMARK 3 T11: -0.0882 T22: -0.0919 REMARK 3 T33: -0.0327 T12: 0.0220 REMARK 3 T13: 0.0276 T23: 0.0304 REMARK 3 L TENSOR REMARK 3 L11: 2.8628 L22: 4.9964 REMARK 3 L33: 5.8687 L12: 0.0558 REMARK 3 L13: 0.7598 L23: -1.5363 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: 0.2725 S13: 0.0312 REMARK 3 S21: -0.1315 S22: -0.1843 S23: -0.3453 REMARK 3 S31: 0.0113 S32: 0.5529 S33: 0.1744 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 41 B 65 REMARK 3 RESIDUE RANGE : B -1 B 15 REMARK 3 ORIGIN FOR THE GROUP (A): -6.7623 31.8560 9.8482 REMARK 3 T TENSOR REMARK 3 T11: -0.0770 T22: -0.1099 REMARK 3 T33: -0.0312 T12: 0.0179 REMARK 3 T13: -0.0324 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 3.5808 L22: 3.7452 REMARK 3 L33: 5.5348 L12: -1.1255 REMARK 3 L13: 0.5521 L23: -1.5923 REMARK 3 S TENSOR REMARK 3 S11: -0.1084 S12: -0.0319 S13: 0.3070 REMARK 3 S21: 0.3349 S22: -0.0958 S23: -0.2338 REMARK 3 S31: -0.4095 S32: 0.2906 S33: 0.2043 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 83 REMARK 3 ORIGIN FOR THE GROUP (A): -10.5550 9.6733 39.6006 REMARK 3 T TENSOR REMARK 3 T11: 0.0060 T22: -0.0861 REMARK 3 T33: -0.0574 T12: -0.0071 REMARK 3 T13: 0.0706 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 9.0262 L22: 5.6704 REMARK 3 L33: 5.7579 L12: -6.2997 REMARK 3 L13: 0.8638 L23: -1.0912 REMARK 3 S TENSOR REMARK 3 S11: -0.1134 S12: -0.2884 S13: -0.2606 REMARK 3 S21: 0.4884 S22: 0.0999 S23: 0.3928 REMARK 3 S31: -0.0094 S32: -0.4285 S33: 0.0136 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 72 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): -16.0559 19.2281 1.0914 REMARK 3 T TENSOR REMARK 3 T11: -0.0594 T22: -0.0033 REMARK 3 T33: -0.0431 T12: 0.0403 REMARK 3 T13: -0.0606 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 1.0284 L22: 10.8990 REMARK 3 L33: 6.0656 L12: -2.2045 REMARK 3 L13: 2.0870 L23: -1.1129 REMARK 3 S TENSOR REMARK 3 S11: 0.1860 S12: 0.2963 S13: -0.1190 REMARK 3 S21: -0.4780 S22: -0.1323 S23: 0.4919 REMARK 3 S31: 0.4677 S32: -0.0945 S33: -0.0538 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 34 REMARK 3 RESIDUE RANGE : B 21 B 34 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5887 14.8883 20.3080 REMARK 3 T TENSOR REMARK 3 T11: 0.0466 T22: -0.0523 REMARK 3 T33: -0.0314 T12: 0.0631 REMARK 3 T13: -0.0126 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.4925 L22: 1.3427 REMARK 3 L33: 13.9263 L12: -0.2921 REMARK 3 L13: 2.4365 L23: -4.0532 REMARK 3 S TENSOR REMARK 3 S11: -0.1192 S12: -0.1475 S13: -0.1676 REMARK 3 S21: -0.1184 S22: 0.0925 S23: 0.2898 REMARK 3 S31: 0.2420 S32: -0.5117 S33: 0.0267 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1YLQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031662. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-04; 24-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 19-ID; 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97775; 0.97774, 0.97970 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL; DOUBLE CRYSTAL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14806 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, AMMONIUM SULPHATE,B-TRIS, PH REMARK 280 5.5, VAPOR DIFFUSION, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 162.72133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.36067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 81.36067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 162.72133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 91 REMARK 465 ILE A 92 REMARK 465 THR A 93 REMARK 465 LEU B 91 REMARK 465 ILE B 92 REMARK 465 THR B 93 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 90 O REMARK 470 ASP B 90 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 16 O HOH A 208 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 29 CB SER A 29 OG 0.110 REMARK 500 ILE A 30 C GLY A 31 N 0.164 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 28 N - CA - C ANGL. DEV. = 22.2 DEGREES REMARK 500 GLY A 31 C - N - CA ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 20 -156.48 -148.05 REMARK 500 TYR A 28 -44.41 3.24 REMARK 500 TYR B 20 -155.46 -150.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 27 TYR A 28 71.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5568 RELATED DB: TARGETDB DBREF 1YLQ A 1 93 UNP O29641 O29641_ARCFU 1 93 DBREF 1YLQ B 1 93 UNP O29641 O29641_ARCFU 1 93 SEQADV 1YLQ ALA A -2 UNP O29641 CLONING ARTIFACT SEQADV 1YLQ GLY A -1 UNP O29641 CLONING ARTIFACT SEQADV 1YLQ HIS A 0 UNP O29641 CLONING ARTIFACT SEQADV 1YLQ ALA B -2 UNP O29641 CLONING ARTIFACT SEQADV 1YLQ GLY B -1 UNP O29641 CLONING ARTIFACT SEQADV 1YLQ HIS B 0 UNP O29641 CLONING ARTIFACT SEQRES 1 A 96 ALA GLY HIS MET LYS GLU ILE LYS GLU ILE THR LYS LYS SEQRES 2 A 96 ASP VAL GLN ASP ALA GLU ILE TYR LEU TYR GLY SER VAL SEQRES 3 A 96 VAL GLU GLY ASP TYR SER ILE GLY LEU SER ASP ILE ASP SEQRES 4 A 96 VAL ALA ILE VAL SER ASP VAL PHE GLU ASP ARG ASN ARG SEQRES 5 A 96 LYS LEU GLU PHE PHE GLY LYS ILE THR LYS LYS PHE PHE SEQRES 6 A 96 ASP SER PRO PHE GLU PHE HIS ILE LEU THR LYS LYS GLU SEQRES 7 A 96 TRP LYS MET SER LYS ARG PHE ILE ARG LYS TYR ARG ARG SEQRES 8 A 96 LEU ASP LEU ILE THR SEQRES 1 B 96 ALA GLY HIS MET LYS GLU ILE LYS GLU ILE THR LYS LYS SEQRES 2 B 96 ASP VAL GLN ASP ALA GLU ILE TYR LEU TYR GLY SER VAL SEQRES 3 B 96 VAL GLU GLY ASP TYR SER ILE GLY LEU SER ASP ILE ASP SEQRES 4 B 96 VAL ALA ILE VAL SER ASP VAL PHE GLU ASP ARG ASN ARG SEQRES 5 B 96 LYS LEU GLU PHE PHE GLY LYS ILE THR LYS LYS PHE PHE SEQRES 6 B 96 ASP SER PRO PHE GLU PHE HIS ILE LEU THR LYS LYS GLU SEQRES 7 B 96 TRP LYS MET SER LYS ARG PHE ILE ARG LYS TYR ARG ARG SEQRES 8 B 96 LEU ASP LEU ILE THR HET SO4 A 201 5 HET SO4 B 202 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *126(H2 O) HELIX 1 1 GLY A -1 VAL A 12 1 14 HELIX 2 2 GLY A 21 GLY A 26 1 6 HELIX 3 3 ASP A 42 GLU A 45 5 4 HELIX 4 4 ASP A 46 PHE A 61 1 16 HELIX 5 5 THR A 72 ARG A 81 1 10 HELIX 6 6 GLY B -1 VAL B 12 1 14 HELIX 7 7 GLY B 21 GLY B 26 1 6 HELIX 8 8 ASP B 42 GLU B 45 5 4 HELIX 9 9 ASP B 46 PHE B 61 1 16 HELIX 10 10 THR B 72 ARG B 81 1 10 SHEET 1 A 4 PHE A 66 LEU A 71 0 SHEET 2 A 4 ILE A 35 VAL A 40 1 N ILE A 39 O HIS A 69 SHEET 3 A 4 GLU A 16 TYR A 20 -1 N TYR A 18 O ALA A 38 SHEET 4 A 4 ARG A 87 ARG A 88 -1 O ARG A 87 N LEU A 19 SHEET 1 B 4 PHE B 66 LEU B 71 0 SHEET 2 B 4 ILE B 35 VAL B 40 1 N ILE B 39 O HIS B 69 SHEET 3 B 4 GLU B 16 TYR B 20 -1 N TYR B 18 O ALA B 38 SHEET 4 B 4 ARG B 87 ARG B 88 -1 O ARG B 87 N LEU B 19 SITE 1 AC1 8 LEU A 32 SER A 33 ASP A 36 ARG A 47 SITE 2 AC1 8 ASN A 48 GLU A 67 HOH A 222 HOH A 240 SITE 1 AC2 8 LEU B 32 SER B 33 ASP B 36 ARG B 47 SITE 2 AC2 8 ASN B 48 GLU B 67 HOH B 223 HOH B 240 CRYST1 38.350 38.350 244.082 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026076 0.015055 0.000000 0.00000 SCALE2 0.000000 0.030110 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004097 0.00000