data_1YMF # _entry.id 1YMF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YMF RCSB RCSB031682 WWPDB D_1000031682 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2015-12-30 _pdbx_database_PDB_obs_spr.pdb_id 5FFM _pdbx_database_PDB_obs_spr.replace_pdb_id 1YMF _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1YKS _pdbx_database_related.details 'The SeMet derivative of the same protein complexed with ADP' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1YMF _pdbx_database_status.recvd_initial_deposition_date 2005-01-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, J.' 1 'Bera, A.K.' 2 'Kuhn, R.J.' 3 'Smith, J.L.' 4 # _citation.id primary _citation.title 'Structure of the flavivirus helicase: implications for catalytic activity, protein interactions, and proteolytic processing.' _citation.journal_abbrev J.Virol. _citation.journal_volume 79 _citation.page_first 10268 _citation.page_last 10277 _citation.year 2005 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16051820 _citation.pdbx_database_id_DOI 10.1128/JVI.79.16.10268-10277.2005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wu, J.' 1 primary 'Bera, A.K.' 2 primary 'Kuhn, R.J.' 3 primary 'Smith, J.L.' 4 # _cell.entry_id 1YMF _cell.length_a 54.664 _cell.length_b 44.369 _cell.length_c 92.506 _cell.angle_alpha 90.00 _cell.angle_beta 104.09 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1YMF _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Genome Polyprotein [Contains: Flavivirin protease NS3 catalytic subunit]' 50010.090 1 3.4.21.- ? 'sequence database residues 1671-2107 (portion of flavivirin protease NS3 catalytic subunit)' ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 water nat water 18.015 166 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)LKKG(MSE)TTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSE(MSE)KEAFHGLDVKFHTQA FSAHGSGREVIDA(MSE)CHATLTYR(MSE)LEPTRVVNWEVII(MSE)DEAHFLDPASIAARGWAAHRARANESATIL (MSE)TATPPGTSDEFPHSNGEIEDVQTDIPSEPWNTGHDWILADKRPTAWFLPSIRAANV(MSE)AASLRKAGKSVVVL NRKTFEREYPTIKQKKPDFILATDIAE(MSE)GANLCVERVLDCRTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRIG RNPNRDGDSYYYSEPTSENNAHHVCWLEAS(MSE)LLDN(MSE)EVRGG(MSE)VAPLYGVEGTKTPVSPGE(MSE)RLR DDQRKVFRELVRNCDLPVWLSWQVAKAGLKTNDRKWCFEGPEEHEILNDSGETVKCRAPGGAKKPLRPRWCDERVSSDQS ALSEFIKFAEGRR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMLKKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVKFHTQAFSAHGSGREVID AMCHATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARANESATILMTATPPGTSDEFPHSNGEIEDVQTD IPSEPWNTGHDWILADKRPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYPTIKQKKPDFILATDIAEMGANLC VERVLDCRTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYSEPTSENNAHHVCWLEASMLLDNME VRGGMVAPLYGVEGTKTPVSPGEMRLRDDQRKVFRELVRNCDLPVWLSWQVAKAGLKTNDRKWCFEGPEEHEILNDSGET VKCRAPGGAKKPLRPRWCDERVSSDQSALSEFIKFAEGRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 LEU n 1 6 LYS n 1 7 LYS n 1 8 GLY n 1 9 MSE n 1 10 THR n 1 11 THR n 1 12 VAL n 1 13 LEU n 1 14 ASP n 1 15 PHE n 1 16 HIS n 1 17 PRO n 1 18 GLY n 1 19 ALA n 1 20 GLY n 1 21 LYS n 1 22 THR n 1 23 ARG n 1 24 ARG n 1 25 PHE n 1 26 LEU n 1 27 PRO n 1 28 GLN n 1 29 ILE n 1 30 LEU n 1 31 ALA n 1 32 GLU n 1 33 CYS n 1 34 ALA n 1 35 ARG n 1 36 ARG n 1 37 ARG n 1 38 LEU n 1 39 ARG n 1 40 THR n 1 41 LEU n 1 42 VAL n 1 43 LEU n 1 44 ALA n 1 45 PRO n 1 46 THR n 1 47 ARG n 1 48 VAL n 1 49 VAL n 1 50 LEU n 1 51 SER n 1 52 GLU n 1 53 MSE n 1 54 LYS n 1 55 GLU n 1 56 ALA n 1 57 PHE n 1 58 HIS n 1 59 GLY n 1 60 LEU n 1 61 ASP n 1 62 VAL n 1 63 LYS n 1 64 PHE n 1 65 HIS n 1 66 THR n 1 67 GLN n 1 68 ALA n 1 69 PHE n 1 70 SER n 1 71 ALA n 1 72 HIS n 1 73 GLY n 1 74 SER n 1 75 GLY n 1 76 ARG n 1 77 GLU n 1 78 VAL n 1 79 ILE n 1 80 ASP n 1 81 ALA n 1 82 MSE n 1 83 CYS n 1 84 HIS n 1 85 ALA n 1 86 THR n 1 87 LEU n 1 88 THR n 1 89 TYR n 1 90 ARG n 1 91 MSE n 1 92 LEU n 1 93 GLU n 1 94 PRO n 1 95 THR n 1 96 ARG n 1 97 VAL n 1 98 VAL n 1 99 ASN n 1 100 TRP n 1 101 GLU n 1 102 VAL n 1 103 ILE n 1 104 ILE n 1 105 MSE n 1 106 ASP n 1 107 GLU n 1 108 ALA n 1 109 HIS n 1 110 PHE n 1 111 LEU n 1 112 ASP n 1 113 PRO n 1 114 ALA n 1 115 SER n 1 116 ILE n 1 117 ALA n 1 118 ALA n 1 119 ARG n 1 120 GLY n 1 121 TRP n 1 122 ALA n 1 123 ALA n 1 124 HIS n 1 125 ARG n 1 126 ALA n 1 127 ARG n 1 128 ALA n 1 129 ASN n 1 130 GLU n 1 131 SER n 1 132 ALA n 1 133 THR n 1 134 ILE n 1 135 LEU n 1 136 MSE n 1 137 THR n 1 138 ALA n 1 139 THR n 1 140 PRO n 1 141 PRO n 1 142 GLY n 1 143 THR n 1 144 SER n 1 145 ASP n 1 146 GLU n 1 147 PHE n 1 148 PRO n 1 149 HIS n 1 150 SER n 1 151 ASN n 1 152 GLY n 1 153 GLU n 1 154 ILE n 1 155 GLU n 1 156 ASP n 1 157 VAL n 1 158 GLN n 1 159 THR n 1 160 ASP n 1 161 ILE n 1 162 PRO n 1 163 SER n 1 164 GLU n 1 165 PRO n 1 166 TRP n 1 167 ASN n 1 168 THR n 1 169 GLY n 1 170 HIS n 1 171 ASP n 1 172 TRP n 1 173 ILE n 1 174 LEU n 1 175 ALA n 1 176 ASP n 1 177 LYS n 1 178 ARG n 1 179 PRO n 1 180 THR n 1 181 ALA n 1 182 TRP n 1 183 PHE n 1 184 LEU n 1 185 PRO n 1 186 SER n 1 187 ILE n 1 188 ARG n 1 189 ALA n 1 190 ALA n 1 191 ASN n 1 192 VAL n 1 193 MSE n 1 194 ALA n 1 195 ALA n 1 196 SER n 1 197 LEU n 1 198 ARG n 1 199 LYS n 1 200 ALA n 1 201 GLY n 1 202 LYS n 1 203 SER n 1 204 VAL n 1 205 VAL n 1 206 VAL n 1 207 LEU n 1 208 ASN n 1 209 ARG n 1 210 LYS n 1 211 THR n 1 212 PHE n 1 213 GLU n 1 214 ARG n 1 215 GLU n 1 216 TYR n 1 217 PRO n 1 218 THR n 1 219 ILE n 1 220 LYS n 1 221 GLN n 1 222 LYS n 1 223 LYS n 1 224 PRO n 1 225 ASP n 1 226 PHE n 1 227 ILE n 1 228 LEU n 1 229 ALA n 1 230 THR n 1 231 ASP n 1 232 ILE n 1 233 ALA n 1 234 GLU n 1 235 MSE n 1 236 GLY n 1 237 ALA n 1 238 ASN n 1 239 LEU n 1 240 CYS n 1 241 VAL n 1 242 GLU n 1 243 ARG n 1 244 VAL n 1 245 LEU n 1 246 ASP n 1 247 CYS n 1 248 ARG n 1 249 THR n 1 250 ALA n 1 251 PHE n 1 252 LYS n 1 253 PRO n 1 254 VAL n 1 255 LEU n 1 256 VAL n 1 257 ASP n 1 258 GLU n 1 259 GLY n 1 260 ARG n 1 261 LYS n 1 262 VAL n 1 263 ALA n 1 264 ILE n 1 265 LYS n 1 266 GLY n 1 267 PRO n 1 268 LEU n 1 269 ARG n 1 270 ILE n 1 271 SER n 1 272 ALA n 1 273 SER n 1 274 SER n 1 275 ALA n 1 276 ALA n 1 277 GLN n 1 278 ARG n 1 279 ARG n 1 280 GLY n 1 281 ARG n 1 282 ILE n 1 283 GLY n 1 284 ARG n 1 285 ASN n 1 286 PRO n 1 287 ASN n 1 288 ARG n 1 289 ASP n 1 290 GLY n 1 291 ASP n 1 292 SER n 1 293 TYR n 1 294 TYR n 1 295 TYR n 1 296 SER n 1 297 GLU n 1 298 PRO n 1 299 THR n 1 300 SER n 1 301 GLU n 1 302 ASN n 1 303 ASN n 1 304 ALA n 1 305 HIS n 1 306 HIS n 1 307 VAL n 1 308 CYS n 1 309 TRP n 1 310 LEU n 1 311 GLU n 1 312 ALA n 1 313 SER n 1 314 MSE n 1 315 LEU n 1 316 LEU n 1 317 ASP n 1 318 ASN n 1 319 MSE n 1 320 GLU n 1 321 VAL n 1 322 ARG n 1 323 GLY n 1 324 GLY n 1 325 MSE n 1 326 VAL n 1 327 ALA n 1 328 PRO n 1 329 LEU n 1 330 TYR n 1 331 GLY n 1 332 VAL n 1 333 GLU n 1 334 GLY n 1 335 THR n 1 336 LYS n 1 337 THR n 1 338 PRO n 1 339 VAL n 1 340 SER n 1 341 PRO n 1 342 GLY n 1 343 GLU n 1 344 MSE n 1 345 ARG n 1 346 LEU n 1 347 ARG n 1 348 ASP n 1 349 ASP n 1 350 GLN n 1 351 ARG n 1 352 LYS n 1 353 VAL n 1 354 PHE n 1 355 ARG n 1 356 GLU n 1 357 LEU n 1 358 VAL n 1 359 ARG n 1 360 ASN n 1 361 CYS n 1 362 ASP n 1 363 LEU n 1 364 PRO n 1 365 VAL n 1 366 TRP n 1 367 LEU n 1 368 SER n 1 369 TRP n 1 370 GLN n 1 371 VAL n 1 372 ALA n 1 373 LYS n 1 374 ALA n 1 375 GLY n 1 376 LEU n 1 377 LYS n 1 378 THR n 1 379 ASN n 1 380 ASP n 1 381 ARG n 1 382 LYS n 1 383 TRP n 1 384 CYS n 1 385 PHE n 1 386 GLU n 1 387 GLY n 1 388 PRO n 1 389 GLU n 1 390 GLU n 1 391 HIS n 1 392 GLU n 1 393 ILE n 1 394 LEU n 1 395 ASN n 1 396 ASP n 1 397 SER n 1 398 GLY n 1 399 GLU n 1 400 THR n 1 401 VAL n 1 402 LYS n 1 403 CYS n 1 404 ARG n 1 405 ALA n 1 406 PRO n 1 407 GLY n 1 408 GLY n 1 409 ALA n 1 410 LYS n 1 411 LYS n 1 412 PRO n 1 413 LEU n 1 414 ARG n 1 415 PRO n 1 416 ARG n 1 417 TRP n 1 418 CYS n 1 419 ASP n 1 420 GLU n 1 421 ARG n 1 422 VAL n 1 423 SER n 1 424 SER n 1 425 ASP n 1 426 GLN n 1 427 SER n 1 428 ALA n 1 429 LEU n 1 430 SER n 1 431 GLU n 1 432 PHE n 1 433 ILE n 1 434 LYS n 1 435 PHE n 1 436 ALA n 1 437 GLU n 1 438 GLY n 1 439 ARG n 1 440 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Flavivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'strain Pasteur 17D-204' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Yellow fever virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11089 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_YEFV2 _struct_ref.pdbx_db_accession P19901 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLKKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVKFHTQAFSAHGSGREVIDAMC HATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARANESATILMTATPPGTSDEFPHSNGEIEDVQTDIPS EPWNTGHDWILADKRPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYPTIKQKKPDFILATDIAEMGANLCVER VLDCRTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYSEPTSENNAHHVCWLEASMLLDNMEVRG GMVAPLYGVEGTKTPVSPGEMRLRDDQRKVFRELVRNCDLPVWLSWQVAKAGLKTNDRKWCFEGPEEHEILNDSGETVKC RAPGGAKKPLRPRWCDERVSSDQSALSEFIKFAEGRR ; _struct_ref.pdbx_align_begin 1671 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YMF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 440 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P19901 _struct_ref_seq.db_align_beg 1671 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2107 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 187 _struct_ref_seq.pdbx_auth_seq_align_end 623 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YMF GLY A 1 ? UNP P19901 ? ? 'CLONING ARTIFACT' 184 1 1 1YMF SER A 2 ? UNP P19901 ? ? 'CLONING ARTIFACT' 185 2 1 1YMF HIS A 3 ? UNP P19901 ? ? 'CLONING ARTIFACT' 186 3 1 1YMF MSE A 4 ? UNP P19901 MET 1671 'MODIFIED RESIDUE' 187 4 1 1YMF MSE A 9 ? UNP P19901 MET 1676 'MODIFIED RESIDUE' 192 5 1 1YMF MSE A 53 ? UNP P19901 MET 1720 'MODIFIED RESIDUE' 236 6 1 1YMF MSE A 82 ? UNP P19901 MET 1749 'MODIFIED RESIDUE' 265 7 1 1YMF MSE A 91 ? UNP P19901 MET 1758 'MODIFIED RESIDUE' 274 8 1 1YMF MSE A 105 ? UNP P19901 MET 1772 'MODIFIED RESIDUE' 288 9 1 1YMF MSE A 136 ? UNP P19901 MET 1803 'MODIFIED RESIDUE' 319 10 1 1YMF MSE A 193 ? UNP P19901 MET 1860 'MODIFIED RESIDUE' 376 11 1 1YMF MSE A 235 ? UNP P19901 MET 1902 'MODIFIED RESIDUE' 418 12 1 1YMF MSE A 314 ? UNP P19901 MET 1981 'MODIFIED RESIDUE' 497 13 1 1YMF MSE A 319 ? UNP P19901 MET 1986 'MODIFIED RESIDUE' 502 14 1 1YMF MSE A 325 ? UNP P19901 MET 1992 'MODIFIED RESIDUE' 508 15 1 1YMF MSE A 344 ? UNP P19901 MET 2011 'MODIFIED RESIDUE' 527 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YMF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 10000, HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100.0 ? 1 2 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date 2004-07-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9650 _diffrn_radiation_wavelength.wt 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'APS BEAMLINE 19-BM' APS 19-BM ? 0.9650 2 SYNCHROTRON 'APS BEAMLINE 23-ID-D' APS 23-ID-D ? ? # _reflns.entry_id 1YMF _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 50 _reflns.number_all 14020 _reflns.number_obs 13857 _reflns.percent_possible_obs 97.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 81.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1YMF _refine.ls_d_res_high 2.6 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 13857 _refine.ls_number_reflns_obs 13516 _refine.ls_number_reflns_R_free 13164 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.199 _refine.ls_R_factor_R_free 0.278 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3382 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 166 _refine_hist.number_atoms_total 3575 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 50 # _struct.entry_id 1YMF _struct.title 'crystal structure of yellow fever virus NS3 helicase complexed with ADP' _struct.pdbx_descriptor 'Genome Polyprotein [Contains: Flavivirin protease NS3 catalytic subunit]' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YMF _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'helicase, flavivirus, DEAD-box, ATPase, RTPase, Yellow Fever virus, ADP, complex, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 24 ? ARG A 37 ? ARG A 207 ARG A 220 1 ? 14 HELX_P HELX_P2 2 THR A 46 ? HIS A 58 ? THR A 229 HIS A 241 1 ? 13 HELX_P HELX_P3 3 HIS A 84 ? GLU A 93 ? HIS A 267 GLU A 276 1 ? 10 HELX_P HELX_P4 4 ASP A 112 ? ALA A 128 ? ASP A 295 ALA A 311 1 ? 17 HELX_P HELX_P5 5 ASP A 171 ? ASP A 176 ? ASP A 354 ASP A 359 1 ? 6 HELX_P HELX_P6 6 SER A 186 ? ALA A 200 ? SER A 369 ALA A 383 1 ? 15 HELX_P HELX_P7 7 ASP A 231 ? MSE A 235 ? ASP A 414 MSE A 418 5 ? 5 HELX_P HELX_P8 8 SER A 271 ? GLY A 280 ? SER A 454 GLY A 463 1 ? 10 HELX_P HELX_P9 9 VAL A 307 ? ASP A 317 ? VAL A 490 ASP A 500 1 ? 11 HELX_P HELX_P10 10 VAL A 321 ? MSE A 325 ? VAL A 504 MSE A 508 5 ? 5 HELX_P HELX_P11 11 VAL A 332 ? THR A 337 ? VAL A 515 THR A 520 1 ? 6 HELX_P HELX_P12 12 ARG A 347 ? ASN A 360 ? ARG A 530 ASN A 543 1 ? 14 HELX_P HELX_P13 13 PRO A 364 ? LYS A 373 ? PRO A 547 LYS A 556 1 ? 10 HELX_P HELX_P14 14 ARG A 381 ? PHE A 385 ? ARG A 564 PHE A 568 5 ? 5 HELX_P HELX_P15 15 PRO A 388 ? GLU A 392 ? PRO A 571 GLU A 575 5 ? 5 HELX_P HELX_P16 16 ARG A 421 ? SER A 424 ? ARG A 604 SER A 607 5 ? 4 HELX_P HELX_P17 17 ASP A 425 ? GLU A 437 ? ASP A 608 GLU A 620 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A HIS 3 C ? ? ? 1_555 A MSE 4 N ? ? A HIS 186 A MSE 187 1_555 ? ? ? ? ? ? ? 1.321 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A LEU 5 N ? ? A MSE 187 A LEU 188 1_555 ? ? ? ? ? ? ? 1.335 ? covale3 covale ? ? A GLY 8 C ? ? ? 1_555 A MSE 9 N ? ? A GLY 191 A MSE 192 1_555 ? ? ? ? ? ? ? 1.336 ? covale4 covale ? ? A MSE 9 C ? ? ? 1_555 A THR 10 N ? ? A MSE 192 A THR 193 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A GLU 52 C ? ? ? 1_555 A MSE 53 N ? ? A GLU 235 A MSE 236 1_555 ? ? ? ? ? ? ? 1.322 ? covale6 covale ? ? A MSE 53 C ? ? ? 1_555 A LYS 54 N ? ? A MSE 236 A LYS 237 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A ALA 81 C ? ? ? 1_555 A MSE 82 N ? ? A ALA 264 A MSE 265 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A MSE 82 C ? ? ? 1_555 A CYS 83 N ? ? A MSE 265 A CYS 266 1_555 ? ? ? ? ? ? ? 1.319 ? covale9 covale ? ? A ARG 90 C ? ? ? 1_555 A MSE 91 N ? ? A ARG 273 A MSE 274 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A MSE 91 C ? ? ? 1_555 A LEU 92 N ? ? A MSE 274 A LEU 275 1_555 ? ? ? ? ? ? ? 1.331 ? covale11 covale ? ? A ILE 104 C ? ? ? 1_555 A MSE 105 N ? ? A ILE 287 A MSE 288 1_555 ? ? ? ? ? ? ? 1.323 ? covale12 covale ? ? A MSE 105 C ? ? ? 1_555 A ASP 106 N ? ? A MSE 288 A ASP 289 1_555 ? ? ? ? ? ? ? 1.302 ? covale13 covale ? ? A LEU 135 C ? ? ? 1_555 A MSE 136 N ? ? A LEU 318 A MSE 319 1_555 ? ? ? ? ? ? ? 1.330 ? covale14 covale ? ? A MSE 136 C ? ? ? 1_555 A THR 137 N ? ? A MSE 319 A THR 320 1_555 ? ? ? ? ? ? ? 1.325 ? covale15 covale ? ? A VAL 192 C ? ? ? 1_555 A MSE 193 N ? ? A VAL 375 A MSE 376 1_555 ? ? ? ? ? ? ? 1.320 ? covale16 covale ? ? A MSE 193 C ? ? ? 1_555 A ALA 194 N ? ? A MSE 376 A ALA 377 1_555 ? ? ? ? ? ? ? 1.327 ? covale17 covale ? ? A GLU 234 C ? ? ? 1_555 A MSE 235 N ? ? A GLU 417 A MSE 418 1_555 ? ? ? ? ? ? ? 1.324 ? covale18 covale ? ? A MSE 235 C ? ? ? 1_555 A GLY 236 N ? ? A MSE 418 A GLY 419 1_555 ? ? ? ? ? ? ? 1.325 ? covale19 covale ? ? A SER 313 C ? ? ? 1_555 A MSE 314 N ? ? A SER 496 A MSE 497 1_555 ? ? ? ? ? ? ? 1.319 ? covale20 covale ? ? A MSE 314 C ? ? ? 1_555 A LEU 315 N ? ? A MSE 497 A LEU 498 1_555 ? ? ? ? ? ? ? 1.322 ? covale21 covale ? ? A ASN 318 C ? ? ? 1_555 A MSE 319 N ? ? A ASN 501 A MSE 502 1_555 ? ? ? ? ? ? ? 1.325 ? covale22 covale ? ? A MSE 319 C ? ? ? 1_555 A GLU 320 N ? ? A MSE 502 A GLU 503 1_555 ? ? ? ? ? ? ? 1.324 ? covale23 covale ? ? A GLY 324 C ? ? ? 1_555 A MSE 325 N ? ? A GLY 507 A MSE 508 1_555 ? ? ? ? ? ? ? 1.333 ? covale24 covale ? ? A MSE 325 C ? ? ? 1_555 A VAL 326 N ? ? A MSE 508 A VAL 509 1_555 ? ? ? ? ? ? ? 1.333 ? covale25 covale ? ? A GLU 343 C ? ? ? 1_555 A MSE 344 N ? ? A GLU 526 A MSE 527 1_555 ? ? ? ? ? ? ? 1.319 ? covale26 covale ? ? A MSE 344 C ? ? ? 1_555 A ARG 345 N ? ? A MSE 527 A ARG 528 1_555 ? ? ? ? ? ? ? 1.324 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 266 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 449 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 267 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 450 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 7.82 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel C 1 2 ? anti-parallel C 2 3 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 10 ? LEU A 13 ? THR A 193 LEU A 196 A 2 ALA A 132 ? MSE A 136 ? ALA A 315 MSE A 319 A 3 VAL A 102 ? MSE A 105 ? VAL A 285 MSE A 288 A 4 THR A 40 ? ALA A 44 ? THR A 223 ALA A 227 A 5 ILE A 79 ? CYS A 83 ? ILE A 262 CYS A 266 A 6 VAL A 62 ? PHE A 64 ? VAL A 245 PHE A 247 B 1 ILE A 154 ? GLN A 158 ? ILE A 337 GLN A 341 B 2 ASP A 291 ? TYR A 295 ? ASP A 474 TYR A 478 B 3 ARG A 243 ? ASP A 246 ? ARG A 426 ASP A 429 B 4 THR A 180 ? PHE A 183 ? THR A 363 PHE A 366 B 5 PHE A 226 ? ALA A 229 ? PHE A 409 ALA A 412 B 6 VAL A 204 ? VAL A 206 ? VAL A 387 VAL A 389 C 1 THR A 249 ? VAL A 256 ? THR A 432 VAL A 439 C 2 LYS A 261 ? ARG A 269 ? LYS A 444 ARG A 452 C 3 CYS A 418 ? ASP A 419 ? CYS A 601 ASP A 602 D 1 LYS A 402 ? ARG A 404 ? LYS A 585 ARG A 587 D 2 LYS A 410 ? PRO A 412 ? LYS A 593 PRO A 595 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 13 ? N LEU A 196 O LEU A 135 ? O LEU A 318 A 2 3 O ILE A 134 ? O ILE A 317 N MSE A 105 ? N MSE A 288 A 3 4 O ILE A 104 ? O ILE A 287 N LEU A 43 ? N LEU A 226 A 4 5 N VAL A 42 ? N VAL A 225 O ASP A 80 ? O ASP A 263 A 5 6 O ALA A 81 ? O ALA A 264 N LYS A 63 ? N LYS A 246 B 1 2 N GLU A 155 ? N GLU A 338 O TYR A 293 ? O TYR A 476 B 2 3 O TYR A 294 ? O TYR A 477 N VAL A 244 ? N VAL A 427 B 3 4 O LEU A 245 ? O LEU A 428 N ALA A 181 ? N ALA A 364 B 4 5 N TRP A 182 ? N TRP A 365 O ILE A 227 ? O ILE A 410 B 5 6 O LEU A 228 ? O LEU A 411 N VAL A 205 ? N VAL A 388 C 1 2 N VAL A 254 ? N VAL A 437 O ALA A 263 ? O ALA A 446 C 2 3 N VAL A 262 ? N VAL A 445 O CYS A 418 ? O CYS A 601 D 1 2 N CYS A 403 ? N CYS A 586 O LYS A 411 ? O LYS A 594 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE ADP A 998' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 HOH C . ? HOH A 113 . ? 1_555 ? 2 AC1 8 HOH C . ? HOH A 155 . ? 1_555 ? 3 AC1 8 GLY A 18 ? GLY A 201 . ? 1_555 ? 4 AC1 8 GLY A 20 ? GLY A 203 . ? 1_555 ? 5 AC1 8 LYS A 21 ? LYS A 204 . ? 1_555 ? 6 AC1 8 THR A 22 ? THR A 205 . ? 1_555 ? 7 AC1 8 ARG A 23 ? ARG A 206 . ? 1_555 ? 8 AC1 8 ALA A 237 ? ALA A 420 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YMF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YMF _atom_sites.fract_transf_matrix[1][1] 0.018294 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004591 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022538 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011145 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 184 ? ? ? A . n A 1 2 SER 2 185 185 SER SER A . n A 1 3 HIS 3 186 186 HIS HIS A . n A 1 4 MSE 4 187 187 MSE MSE A . n A 1 5 LEU 5 188 188 LEU LEU A . n A 1 6 LYS 6 189 189 LYS LYS A . n A 1 7 LYS 7 190 190 LYS LYS A . n A 1 8 GLY 8 191 191 GLY GLY A . n A 1 9 MSE 9 192 192 MSE MSE A . n A 1 10 THR 10 193 193 THR THR A . n A 1 11 THR 11 194 194 THR THR A . n A 1 12 VAL 12 195 195 VAL VAL A . n A 1 13 LEU 13 196 196 LEU LEU A . n A 1 14 ASP 14 197 197 ASP ASP A . n A 1 15 PHE 15 198 198 PHE PHE A . n A 1 16 HIS 16 199 199 HIS HIS A . n A 1 17 PRO 17 200 200 PRO PRO A . n A 1 18 GLY 18 201 201 GLY GLY A . n A 1 19 ALA 19 202 202 ALA ALA A . n A 1 20 GLY 20 203 203 GLY GLY A . n A 1 21 LYS 21 204 204 LYS LYS A . n A 1 22 THR 22 205 205 THR THR A . n A 1 23 ARG 23 206 206 ARG ALA A . n A 1 24 ARG 24 207 207 ARG ARG A . n A 1 25 PHE 25 208 208 PHE PHE A . n A 1 26 LEU 26 209 209 LEU LEU A . n A 1 27 PRO 27 210 210 PRO PRO A . n A 1 28 GLN 28 211 211 GLN GLN A . n A 1 29 ILE 29 212 212 ILE ILE A . n A 1 30 LEU 30 213 213 LEU LEU A . n A 1 31 ALA 31 214 214 ALA ALA A . n A 1 32 GLU 32 215 215 GLU GLU A . n A 1 33 CYS 33 216 216 CYS CYS A . n A 1 34 ALA 34 217 217 ALA ALA A . n A 1 35 ARG 35 218 218 ARG ARG A . n A 1 36 ARG 36 219 219 ARG ARG A . n A 1 37 ARG 37 220 220 ARG ARG A . n A 1 38 LEU 38 221 221 LEU LEU A . n A 1 39 ARG 39 222 222 ARG ARG A . n A 1 40 THR 40 223 223 THR THR A . n A 1 41 LEU 41 224 224 LEU LEU A . n A 1 42 VAL 42 225 225 VAL VAL A . n A 1 43 LEU 43 226 226 LEU LEU A . n A 1 44 ALA 44 227 227 ALA ALA A . n A 1 45 PRO 45 228 228 PRO PRO A . n A 1 46 THR 46 229 229 THR THR A . n A 1 47 ARG 47 230 230 ARG ARG A . n A 1 48 VAL 48 231 231 VAL VAL A . n A 1 49 VAL 49 232 232 VAL VAL A . n A 1 50 LEU 50 233 233 LEU LEU A . n A 1 51 SER 51 234 234 SER SER A . n A 1 52 GLU 52 235 235 GLU GLU A . n A 1 53 MSE 53 236 236 MSE MSE A . n A 1 54 LYS 54 237 237 LYS LYS A . n A 1 55 GLU 55 238 238 GLU GLU A . n A 1 56 ALA 56 239 239 ALA ALA A . n A 1 57 PHE 57 240 240 PHE PHE A . n A 1 58 HIS 58 241 241 HIS HIS A . n A 1 59 GLY 59 242 242 GLY GLY A . n A 1 60 LEU 60 243 243 LEU LEU A . n A 1 61 ASP 61 244 244 ASP ASP A . n A 1 62 VAL 62 245 245 VAL VAL A . n A 1 63 LYS 63 246 246 LYS LYS A . n A 1 64 PHE 64 247 247 PHE PHE A . n A 1 65 HIS 65 248 248 HIS HIS A . n A 1 66 THR 66 249 249 THR THR A . n A 1 67 GLN 67 250 250 GLN GLN A . n A 1 68 ALA 68 251 251 ALA ALA A . n A 1 69 PHE 69 252 252 PHE PHE A . n A 1 70 SER 70 253 253 SER SER A . n A 1 71 ALA 71 254 254 ALA ALA A . n A 1 72 HIS 72 255 255 HIS HIS A . n A 1 73 GLY 73 256 256 GLY GLY A . n A 1 74 SER 74 257 257 SER SER A . n A 1 75 GLY 75 258 258 GLY GLY A . n A 1 76 ARG 76 259 259 ARG ARG A . n A 1 77 GLU 77 260 260 GLU GLU A . n A 1 78 VAL 78 261 261 VAL VAL A . n A 1 79 ILE 79 262 262 ILE ILE A . n A 1 80 ASP 80 263 263 ASP ASP A . n A 1 81 ALA 81 264 264 ALA ALA A . n A 1 82 MSE 82 265 265 MSE MSE A . n A 1 83 CYS 83 266 266 CYS CYS A . n A 1 84 HIS 84 267 267 HIS HIS A . n A 1 85 ALA 85 268 268 ALA ALA A . n A 1 86 THR 86 269 269 THR THR A . n A 1 87 LEU 87 270 270 LEU LEU A . n A 1 88 THR 88 271 271 THR THR A . n A 1 89 TYR 89 272 272 TYR TYR A . n A 1 90 ARG 90 273 273 ARG ARG A . n A 1 91 MSE 91 274 274 MSE MSE A . n A 1 92 LEU 92 275 275 LEU LEU A . n A 1 93 GLU 93 276 276 GLU GLU A . n A 1 94 PRO 94 277 277 PRO PRO A . n A 1 95 THR 95 278 278 THR THR A . n A 1 96 ARG 96 279 279 ARG ARG A . n A 1 97 VAL 97 280 280 VAL VAL A . n A 1 98 VAL 98 281 281 VAL VAL A . n A 1 99 ASN 99 282 282 ASN ASN A . n A 1 100 TRP 100 283 283 TRP TRP A . n A 1 101 GLU 101 284 284 GLU GLU A . n A 1 102 VAL 102 285 285 VAL VAL A . n A 1 103 ILE 103 286 286 ILE ILE A . n A 1 104 ILE 104 287 287 ILE ILE A . n A 1 105 MSE 105 288 288 MSE MSE A . n A 1 106 ASP 106 289 289 ASP ASP A . n A 1 107 GLU 107 290 290 GLU GLU A . n A 1 108 ALA 108 291 291 ALA ALA A . n A 1 109 HIS 109 292 292 HIS HIS A . n A 1 110 PHE 110 293 293 PHE PHE A . n A 1 111 LEU 111 294 294 LEU LEU A . n A 1 112 ASP 112 295 295 ASP ASP A . n A 1 113 PRO 113 296 296 PRO PRO A . n A 1 114 ALA 114 297 297 ALA ALA A . n A 1 115 SER 115 298 298 SER SER A . n A 1 116 ILE 116 299 299 ILE ILE A . n A 1 117 ALA 117 300 300 ALA ALA A . n A 1 118 ALA 118 301 301 ALA ALA A . n A 1 119 ARG 119 302 302 ARG ARG A . n A 1 120 GLY 120 303 303 GLY GLY A . n A 1 121 TRP 121 304 304 TRP TRP A . n A 1 122 ALA 122 305 305 ALA ALA A . n A 1 123 ALA 123 306 306 ALA ALA A . n A 1 124 HIS 124 307 307 HIS HIS A . n A 1 125 ARG 125 308 308 ARG ARG A . n A 1 126 ALA 126 309 309 ALA ALA A . n A 1 127 ARG 127 310 310 ARG ARG A . n A 1 128 ALA 128 311 311 ALA ALA A . n A 1 129 ASN 129 312 312 ASN ASN A . n A 1 130 GLU 130 313 313 GLU GLU A . n A 1 131 SER 131 314 314 SER SER A . n A 1 132 ALA 132 315 315 ALA ALA A . n A 1 133 THR 133 316 316 THR THR A . n A 1 134 ILE 134 317 317 ILE ILE A . n A 1 135 LEU 135 318 318 LEU LEU A . n A 1 136 MSE 136 319 319 MSE MSE A . n A 1 137 THR 137 320 320 THR THR A . n A 1 138 ALA 138 321 321 ALA ALA A . n A 1 139 THR 139 322 322 THR THR A . n A 1 140 PRO 140 323 323 PRO PRO A . n A 1 141 PRO 141 324 324 PRO PRO A . n A 1 142 GLY 142 325 325 GLY GLY A . n A 1 143 THR 143 326 326 THR THR A . n A 1 144 SER 144 327 327 SER SER A . n A 1 145 ASP 145 328 328 ASP ASP A . n A 1 146 GLU 146 329 329 GLU GLU A . n A 1 147 PHE 147 330 330 PHE PHE A . n A 1 148 PRO 148 331 331 PRO PRO A . n A 1 149 HIS 149 332 332 HIS HIS A . n A 1 150 SER 150 333 333 SER SER A . n A 1 151 ASN 151 334 334 ASN ASN A . n A 1 152 GLY 152 335 335 GLY GLY A . n A 1 153 GLU 153 336 336 GLU GLU A . n A 1 154 ILE 154 337 337 ILE ILE A . n A 1 155 GLU 155 338 338 GLU GLU A . n A 1 156 ASP 156 339 339 ASP ASP A . n A 1 157 VAL 157 340 340 VAL VAL A . n A 1 158 GLN 158 341 341 GLN GLN A . n A 1 159 THR 159 342 342 THR THR A . n A 1 160 ASP 160 343 343 ASP ASP A . n A 1 161 ILE 161 344 344 ILE ILE A . n A 1 162 PRO 162 345 345 PRO PRO A . n A 1 163 SER 163 346 346 SER SER A . n A 1 164 GLU 164 347 347 GLU GLU A . n A 1 165 PRO 165 348 348 PRO PRO A . n A 1 166 TRP 166 349 349 TRP TRP A . n A 1 167 ASN 167 350 350 ASN ASN A . n A 1 168 THR 168 351 351 THR THR A . n A 1 169 GLY 169 352 352 GLY GLY A . n A 1 170 HIS 170 353 353 HIS HIS A . n A 1 171 ASP 171 354 354 ASP ASP A . n A 1 172 TRP 172 355 355 TRP TRP A . n A 1 173 ILE 173 356 356 ILE ILE A . n A 1 174 LEU 174 357 357 LEU LEU A . n A 1 175 ALA 175 358 358 ALA ALA A . n A 1 176 ASP 176 359 359 ASP ASP A . n A 1 177 LYS 177 360 360 LYS LYS A . n A 1 178 ARG 178 361 361 ARG ARG A . n A 1 179 PRO 179 362 362 PRO PRO A . n A 1 180 THR 180 363 363 THR THR A . n A 1 181 ALA 181 364 364 ALA ALA A . n A 1 182 TRP 182 365 365 TRP TRP A . n A 1 183 PHE 183 366 366 PHE PHE A . n A 1 184 LEU 184 367 367 LEU LEU A . n A 1 185 PRO 185 368 368 PRO PRO A . n A 1 186 SER 186 369 369 SER SER A . n A 1 187 ILE 187 370 370 ILE ILE A . n A 1 188 ARG 188 371 371 ARG ARG A . n A 1 189 ALA 189 372 372 ALA ALA A . n A 1 190 ALA 190 373 373 ALA ALA A . n A 1 191 ASN 191 374 374 ASN ASN A . n A 1 192 VAL 192 375 375 VAL VAL A . n A 1 193 MSE 193 376 376 MSE MSE A . n A 1 194 ALA 194 377 377 ALA ALA A . n A 1 195 ALA 195 378 378 ALA ALA A . n A 1 196 SER 196 379 379 SER SER A . n A 1 197 LEU 197 380 380 LEU LEU A . n A 1 198 ARG 198 381 381 ARG ARG A . n A 1 199 LYS 199 382 382 LYS LYS A . n A 1 200 ALA 200 383 383 ALA ALA A . n A 1 201 GLY 201 384 384 GLY GLY A . n A 1 202 LYS 202 385 385 LYS LYS A . n A 1 203 SER 203 386 386 SER SER A . n A 1 204 VAL 204 387 387 VAL VAL A . n A 1 205 VAL 205 388 388 VAL VAL A . n A 1 206 VAL 206 389 389 VAL VAL A . n A 1 207 LEU 207 390 390 LEU LEU A . n A 1 208 ASN 208 391 391 ASN ASN A . n A 1 209 ARG 209 392 392 ARG ARG A . n A 1 210 LYS 210 393 393 LYS LYS A . n A 1 211 THR 211 394 394 THR THR A . n A 1 212 PHE 212 395 395 PHE PHE A . n A 1 213 GLU 213 396 396 GLU GLU A . n A 1 214 ARG 214 397 ? ? ? A . n A 1 215 GLU 215 398 ? ? ? A . n A 1 216 TYR 216 399 ? ? ? A . n A 1 217 PRO 217 400 ? ? ? A . n A 1 218 THR 218 401 ? ? ? A . n A 1 219 ILE 219 402 ? ? ? A . n A 1 220 LYS 220 403 ? ? ? A . n A 1 221 GLN 221 404 ? ? ? A . n A 1 222 LYS 222 405 405 LYS LYS A . n A 1 223 LYS 223 406 406 LYS LYS A . n A 1 224 PRO 224 407 407 PRO PRO A . n A 1 225 ASP 225 408 408 ASP ASP A . n A 1 226 PHE 226 409 409 PHE PHE A . n A 1 227 ILE 227 410 410 ILE ILE A . n A 1 228 LEU 228 411 411 LEU LEU A . n A 1 229 ALA 229 412 412 ALA ALA A . n A 1 230 THR 230 413 413 THR THR A . n A 1 231 ASP 231 414 414 ASP ASP A . n A 1 232 ILE 232 415 415 ILE ILE A . n A 1 233 ALA 233 416 416 ALA ALA A . n A 1 234 GLU 234 417 417 GLU GLU A . n A 1 235 MSE 235 418 418 MSE MSE A . n A 1 236 GLY 236 419 419 GLY GLY A . n A 1 237 ALA 237 420 420 ALA ALA A . n A 1 238 ASN 238 421 421 ASN ASN A . n A 1 239 LEU 239 422 422 LEU LEU A . n A 1 240 CYS 240 423 423 CYS CYS A . n A 1 241 VAL 241 424 424 VAL VAL A . n A 1 242 GLU 242 425 425 GLU GLU A . n A 1 243 ARG 243 426 426 ARG ARG A . n A 1 244 VAL 244 427 427 VAL VAL A . n A 1 245 LEU 245 428 428 LEU LEU A . n A 1 246 ASP 246 429 429 ASP ASP A . n A 1 247 CYS 247 430 430 CYS CYS A . n A 1 248 ARG 248 431 431 ARG ARG A . n A 1 249 THR 249 432 432 THR THR A . n A 1 250 ALA 250 433 433 ALA ALA A . n A 1 251 PHE 251 434 434 PHE PHE A . n A 1 252 LYS 252 435 435 LYS LYS A . n A 1 253 PRO 253 436 436 PRO PRO A . n A 1 254 VAL 254 437 437 VAL VAL A . n A 1 255 LEU 255 438 438 LEU LEU A . n A 1 256 VAL 256 439 439 VAL VAL A . n A 1 257 ASP 257 440 440 ASP ASP A . n A 1 258 GLU 258 441 441 GLU GLU A . n A 1 259 GLY 259 442 442 GLY GLY A . n A 1 260 ARG 260 443 443 ARG ARG A . n A 1 261 LYS 261 444 444 LYS LYS A . n A 1 262 VAL 262 445 445 VAL VAL A . n A 1 263 ALA 263 446 446 ALA ALA A . n A 1 264 ILE 264 447 447 ILE ILE A . n A 1 265 LYS 265 448 448 LYS LYS A . n A 1 266 GLY 266 449 449 GLY GLY A . n A 1 267 PRO 267 450 450 PRO PRO A . n A 1 268 LEU 268 451 451 LEU LEU A . n A 1 269 ARG 269 452 452 ARG ARG A . n A 1 270 ILE 270 453 453 ILE ILE A . n A 1 271 SER 271 454 454 SER SER A . n A 1 272 ALA 272 455 455 ALA ALA A . n A 1 273 SER 273 456 456 SER SER A . n A 1 274 SER 274 457 457 SER SER A . n A 1 275 ALA 275 458 458 ALA ALA A . n A 1 276 ALA 276 459 459 ALA ALA A . n A 1 277 GLN 277 460 460 GLN GLN A . n A 1 278 ARG 278 461 461 ARG ARG A . n A 1 279 ARG 279 462 462 ARG ARG A . n A 1 280 GLY 280 463 463 GLY GLY A . n A 1 281 ARG 281 464 464 ARG ARG A . n A 1 282 ILE 282 465 465 ILE ILE A . n A 1 283 GLY 283 466 466 GLY GLY A . n A 1 284 ARG 284 467 467 ARG ARG A . n A 1 285 ASN 285 468 468 ASN ASN A . n A 1 286 PRO 286 469 469 PRO PRO A . n A 1 287 ASN 287 470 470 ASN ASN A . n A 1 288 ARG 288 471 471 ARG ARG A . n A 1 289 ASP 289 472 472 ASP ASP A . n A 1 290 GLY 290 473 473 GLY GLY A . n A 1 291 ASP 291 474 474 ASP ASP A . n A 1 292 SER 292 475 475 SER SER A . n A 1 293 TYR 293 476 476 TYR TYR A . n A 1 294 TYR 294 477 477 TYR TYR A . n A 1 295 TYR 295 478 478 TYR TYR A . n A 1 296 SER 296 479 479 SER SER A . n A 1 297 GLU 297 480 480 GLU GLU A . n A 1 298 PRO 298 481 481 PRO PRO A . n A 1 299 THR 299 482 482 THR THR A . n A 1 300 SER 300 483 483 SER SER A . n A 1 301 GLU 301 484 484 GLU GLU A . n A 1 302 ASN 302 485 485 ASN ASN A . n A 1 303 ASN 303 486 486 ASN ASN A . n A 1 304 ALA 304 487 487 ALA ALA A . n A 1 305 HIS 305 488 488 HIS HIS A . n A 1 306 HIS 306 489 489 HIS HIS A . n A 1 307 VAL 307 490 490 VAL VAL A . n A 1 308 CYS 308 491 491 CYS CYS A . n A 1 309 TRP 309 492 492 TRP TRP A . n A 1 310 LEU 310 493 493 LEU LEU A . n A 1 311 GLU 311 494 494 GLU GLU A . n A 1 312 ALA 312 495 495 ALA ALA A . n A 1 313 SER 313 496 496 SER SER A . n A 1 314 MSE 314 497 497 MSE MSE A . n A 1 315 LEU 315 498 498 LEU LEU A . n A 1 316 LEU 316 499 499 LEU LEU A . n A 1 317 ASP 317 500 500 ASP ASP A . n A 1 318 ASN 318 501 501 ASN ASN A . n A 1 319 MSE 319 502 502 MSE MSE A . n A 1 320 GLU 320 503 503 GLU GLU A . n A 1 321 VAL 321 504 504 VAL VAL A . n A 1 322 ARG 322 505 505 ARG ARG A . n A 1 323 GLY 323 506 506 GLY GLY A . n A 1 324 GLY 324 507 507 GLY GLY A . n A 1 325 MSE 325 508 508 MSE MSE A . n A 1 326 VAL 326 509 509 VAL VAL A . n A 1 327 ALA 327 510 510 ALA ALA A . n A 1 328 PRO 328 511 511 PRO PRO A . n A 1 329 LEU 329 512 512 LEU LEU A . n A 1 330 TYR 330 513 513 TYR TYR A . n A 1 331 GLY 331 514 514 GLY GLY A . n A 1 332 VAL 332 515 515 VAL VAL A . n A 1 333 GLU 333 516 516 GLU GLU A . n A 1 334 GLY 334 517 517 GLY GLY A . n A 1 335 THR 335 518 518 THR THR A . n A 1 336 LYS 336 519 519 LYS LYS A . n A 1 337 THR 337 520 520 THR THR A . n A 1 338 PRO 338 521 521 PRO PRO A . n A 1 339 VAL 339 522 522 VAL VAL A . n A 1 340 SER 340 523 523 SER SER A . n A 1 341 PRO 341 524 524 PRO PRO A . n A 1 342 GLY 342 525 525 GLY GLY A . n A 1 343 GLU 343 526 526 GLU GLU A . n A 1 344 MSE 344 527 527 MSE MSE A . n A 1 345 ARG 345 528 528 ARG ARG A . n A 1 346 LEU 346 529 529 LEU LEU A . n A 1 347 ARG 347 530 530 ARG ARG A . n A 1 348 ASP 348 531 531 ASP ASP A . n A 1 349 ASP 349 532 532 ASP ASP A . n A 1 350 GLN 350 533 533 GLN GLN A . n A 1 351 ARG 351 534 534 ARG ARG A . n A 1 352 LYS 352 535 535 LYS LYS A . n A 1 353 VAL 353 536 536 VAL VAL A . n A 1 354 PHE 354 537 537 PHE PHE A . n A 1 355 ARG 355 538 538 ARG ARG A . n A 1 356 GLU 356 539 539 GLU GLU A . n A 1 357 LEU 357 540 540 LEU LEU A . n A 1 358 VAL 358 541 541 VAL VAL A . n A 1 359 ARG 359 542 542 ARG ARG A . n A 1 360 ASN 360 543 543 ASN ASN A . n A 1 361 CYS 361 544 544 CYS CYS A . n A 1 362 ASP 362 545 545 ASP ASP A . n A 1 363 LEU 363 546 546 LEU LEU A . n A 1 364 PRO 364 547 547 PRO PRO A . n A 1 365 VAL 365 548 548 VAL VAL A . n A 1 366 TRP 366 549 549 TRP TRP A . n A 1 367 LEU 367 550 550 LEU LEU A . n A 1 368 SER 368 551 551 SER SER A . n A 1 369 TRP 369 552 552 TRP TRP A . n A 1 370 GLN 370 553 553 GLN GLN A . n A 1 371 VAL 371 554 554 VAL VAL A . n A 1 372 ALA 372 555 555 ALA ALA A . n A 1 373 LYS 373 556 556 LYS LYS A . n A 1 374 ALA 374 557 557 ALA ALA A . n A 1 375 GLY 375 558 558 GLY GLY A . n A 1 376 LEU 376 559 559 LEU LEU A . n A 1 377 LYS 377 560 560 LYS LYS A . n A 1 378 THR 378 561 561 THR THR A . n A 1 379 ASN 379 562 562 ASN ASN A . n A 1 380 ASP 380 563 563 ASP ASP A . n A 1 381 ARG 381 564 564 ARG ARG A . n A 1 382 LYS 382 565 565 LYS LYS A . n A 1 383 TRP 383 566 566 TRP TRP A . n A 1 384 CYS 384 567 567 CYS CYS A . n A 1 385 PHE 385 568 568 PHE PHE A . n A 1 386 GLU 386 569 569 GLU GLU A . n A 1 387 GLY 387 570 570 GLY GLY A . n A 1 388 PRO 388 571 571 PRO PRO A . n A 1 389 GLU 389 572 572 GLU GLU A . n A 1 390 GLU 390 573 573 GLU GLU A . n A 1 391 HIS 391 574 574 HIS HIS A . n A 1 392 GLU 392 575 575 GLU GLU A . n A 1 393 ILE 393 576 576 ILE ILE A . n A 1 394 LEU 394 577 577 LEU LEU A . n A 1 395 ASN 395 578 578 ASN ASN A . n A 1 396 ASP 396 579 579 ASP ASP A . n A 1 397 SER 397 580 580 SER SER A . n A 1 398 GLY 398 581 581 GLY GLY A . n A 1 399 GLU 399 582 582 GLU GLU A . n A 1 400 THR 400 583 583 THR THR A . n A 1 401 VAL 401 584 584 VAL VAL A . n A 1 402 LYS 402 585 585 LYS LYS A . n A 1 403 CYS 403 586 586 CYS CYS A . n A 1 404 ARG 404 587 587 ARG ARG A . n A 1 405 ALA 405 588 588 ALA ALA A . n A 1 406 PRO 406 589 589 PRO PRO A . n A 1 407 GLY 407 590 590 GLY GLY A . n A 1 408 GLY 408 591 591 GLY GLY A . n A 1 409 ALA 409 592 592 ALA ALA A . n A 1 410 LYS 410 593 593 LYS LYS A . n A 1 411 LYS 411 594 594 LYS LYS A . n A 1 412 PRO 412 595 595 PRO PRO A . n A 1 413 LEU 413 596 596 LEU LEU A . n A 1 414 ARG 414 597 597 ARG ARG A . n A 1 415 PRO 415 598 598 PRO PRO A . n A 1 416 ARG 416 599 599 ARG ARG A . n A 1 417 TRP 417 600 600 TRP TRP A . n A 1 418 CYS 418 601 601 CYS CYS A . n A 1 419 ASP 419 602 602 ASP ASP A . n A 1 420 GLU 420 603 603 GLU GLU A . n A 1 421 ARG 421 604 604 ARG ARG A . n A 1 422 VAL 422 605 605 VAL VAL A . n A 1 423 SER 423 606 606 SER SER A . n A 1 424 SER 424 607 607 SER SER A . n A 1 425 ASP 425 608 608 ASP ASP A . n A 1 426 GLN 426 609 609 GLN GLN A . n A 1 427 SER 427 610 610 SER SER A . n A 1 428 ALA 428 611 611 ALA ALA A . n A 1 429 LEU 429 612 612 LEU LEU A . n A 1 430 SER 430 613 613 SER SER A . n A 1 431 GLU 431 614 614 GLU GLU A . n A 1 432 PHE 432 615 615 PHE PHE A . n A 1 433 ILE 433 616 616 ILE ILE A . n A 1 434 LYS 434 617 617 LYS LYS A . n A 1 435 PHE 435 618 618 PHE PHE A . n A 1 436 ALA 436 619 619 ALA ALA A . n A 1 437 GLU 437 620 620 GLU GLU A . n A 1 438 GLY 438 621 621 GLY GLY A . n A 1 439 ARG 439 622 622 ARG ARG A . n A 1 440 ARG 440 623 623 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 998 998 ADP ADP A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 6 6 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 9 9 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 21 21 HOH HOH A . C 3 HOH 21 22 22 HOH HOH A . C 3 HOH 22 23 23 HOH HOH A . C 3 HOH 23 24 24 HOH HOH A . C 3 HOH 24 25 25 HOH HOH A . C 3 HOH 25 26 26 HOH HOH A . C 3 HOH 26 27 27 HOH HOH A . C 3 HOH 27 28 28 HOH HOH A . C 3 HOH 28 29 29 HOH HOH A . C 3 HOH 29 30 30 HOH HOH A . C 3 HOH 30 31 31 HOH HOH A . C 3 HOH 31 32 32 HOH HOH A . C 3 HOH 32 33 33 HOH HOH A . C 3 HOH 33 34 34 HOH HOH A . C 3 HOH 34 35 35 HOH HOH A . C 3 HOH 35 36 36 HOH HOH A . C 3 HOH 36 37 37 HOH HOH A . C 3 HOH 37 38 38 HOH HOH A . C 3 HOH 38 39 39 HOH HOH A . C 3 HOH 39 40 40 HOH HOH A . C 3 HOH 40 41 41 HOH HOH A . C 3 HOH 41 42 42 HOH HOH A . C 3 HOH 42 43 43 HOH HOH A . C 3 HOH 43 44 44 HOH HOH A . C 3 HOH 44 45 45 HOH HOH A . C 3 HOH 45 46 46 HOH HOH A . C 3 HOH 46 47 47 HOH HOH A . C 3 HOH 47 48 48 HOH HOH A . C 3 HOH 48 49 49 HOH HOH A . C 3 HOH 49 50 50 HOH HOH A . C 3 HOH 50 51 51 HOH HOH A . C 3 HOH 51 52 52 HOH HOH A . C 3 HOH 52 53 53 HOH HOH A . C 3 HOH 53 54 54 HOH HOH A . C 3 HOH 54 55 55 HOH HOH A . C 3 HOH 55 56 56 HOH HOH A . C 3 HOH 56 57 57 HOH HOH A . C 3 HOH 57 58 58 HOH HOH A . C 3 HOH 58 59 59 HOH HOH A . C 3 HOH 59 60 60 HOH HOH A . C 3 HOH 60 61 61 HOH HOH A . C 3 HOH 61 62 62 HOH HOH A . C 3 HOH 62 63 63 HOH HOH A . C 3 HOH 63 64 64 HOH HOH A . C 3 HOH 64 65 65 HOH HOH A . C 3 HOH 65 66 66 HOH HOH A . C 3 HOH 66 67 67 HOH HOH A . C 3 HOH 67 68 68 HOH HOH A . C 3 HOH 68 69 69 HOH HOH A . C 3 HOH 69 70 70 HOH HOH A . C 3 HOH 70 71 71 HOH HOH A . C 3 HOH 71 72 72 HOH HOH A . C 3 HOH 72 73 73 HOH HOH A . C 3 HOH 73 74 74 HOH HOH A . C 3 HOH 74 75 75 HOH HOH A . C 3 HOH 75 76 76 HOH HOH A . C 3 HOH 76 77 77 HOH HOH A . C 3 HOH 77 78 78 HOH HOH A . C 3 HOH 78 79 79 HOH HOH A . C 3 HOH 79 80 80 HOH HOH A . C 3 HOH 80 81 81 HOH HOH A . C 3 HOH 81 82 82 HOH HOH A . C 3 HOH 82 83 83 HOH HOH A . C 3 HOH 83 84 84 HOH HOH A . C 3 HOH 84 85 85 HOH HOH A . C 3 HOH 85 86 86 HOH HOH A . C 3 HOH 86 87 87 HOH HOH A . C 3 HOH 87 88 88 HOH HOH A . C 3 HOH 88 89 89 HOH HOH A . C 3 HOH 89 90 90 HOH HOH A . C 3 HOH 90 91 91 HOH HOH A . C 3 HOH 91 92 92 HOH HOH A . C 3 HOH 92 93 93 HOH HOH A . C 3 HOH 93 94 94 HOH HOH A . C 3 HOH 94 95 95 HOH HOH A . C 3 HOH 95 96 96 HOH HOH A . C 3 HOH 96 97 97 HOH HOH A . C 3 HOH 97 98 98 HOH HOH A . C 3 HOH 98 99 99 HOH HOH A . C 3 HOH 99 100 100 HOH HOH A . C 3 HOH 100 101 101 HOH HOH A . C 3 HOH 101 102 102 HOH HOH A . C 3 HOH 102 103 103 HOH HOH A . C 3 HOH 103 104 104 HOH HOH A . C 3 HOH 104 105 105 HOH HOH A . C 3 HOH 105 106 106 HOH HOH A . C 3 HOH 106 107 107 HOH HOH A . C 3 HOH 107 108 108 HOH HOH A . C 3 HOH 108 109 109 HOH HOH A . C 3 HOH 109 110 110 HOH HOH A . C 3 HOH 110 111 111 HOH HOH A . C 3 HOH 111 112 112 HOH HOH A . C 3 HOH 112 113 113 HOH HOH A . C 3 HOH 113 114 114 HOH HOH A . C 3 HOH 114 115 115 HOH HOH A . C 3 HOH 115 116 116 HOH HOH A . C 3 HOH 116 117 117 HOH HOH A . C 3 HOH 117 118 118 HOH HOH A . C 3 HOH 118 119 119 HOH HOH A . C 3 HOH 119 120 120 HOH HOH A . C 3 HOH 120 121 121 HOH HOH A . C 3 HOH 121 122 122 HOH HOH A . C 3 HOH 122 123 123 HOH HOH A . C 3 HOH 123 124 124 HOH HOH A . C 3 HOH 124 125 125 HOH HOH A . C 3 HOH 125 126 126 HOH HOH A . C 3 HOH 126 127 127 HOH HOH A . C 3 HOH 127 128 128 HOH HOH A . C 3 HOH 128 129 129 HOH HOH A . C 3 HOH 129 130 130 HOH HOH A . C 3 HOH 130 131 131 HOH HOH A . C 3 HOH 131 132 132 HOH HOH A . C 3 HOH 132 133 133 HOH HOH A . C 3 HOH 133 134 134 HOH HOH A . C 3 HOH 134 135 135 HOH HOH A . C 3 HOH 135 136 136 HOH HOH A . C 3 HOH 136 137 137 HOH HOH A . C 3 HOH 137 138 138 HOH HOH A . C 3 HOH 138 139 139 HOH HOH A . C 3 HOH 139 140 140 HOH HOH A . C 3 HOH 140 141 141 HOH HOH A . C 3 HOH 141 142 142 HOH HOH A . C 3 HOH 142 143 143 HOH HOH A . C 3 HOH 143 144 144 HOH HOH A . C 3 HOH 144 145 145 HOH HOH A . C 3 HOH 145 146 146 HOH HOH A . C 3 HOH 146 147 147 HOH HOH A . C 3 HOH 147 148 148 HOH HOH A . C 3 HOH 148 149 149 HOH HOH A . C 3 HOH 149 150 150 HOH HOH A . C 3 HOH 150 151 151 HOH HOH A . C 3 HOH 151 152 152 HOH HOH A . C 3 HOH 152 153 153 HOH HOH A . C 3 HOH 153 154 154 HOH HOH A . C 3 HOH 154 155 155 HOH HOH A . C 3 HOH 155 156 156 HOH HOH A . C 3 HOH 156 157 157 HOH HOH A . C 3 HOH 157 158 158 HOH HOH A . C 3 HOH 158 159 159 HOH HOH A . C 3 HOH 159 160 160 HOH HOH A . C 3 HOH 160 161 161 HOH HOH A . C 3 HOH 161 162 162 HOH HOH A . C 3 HOH 162 163 163 HOH HOH A . C 3 HOH 163 165 165 HOH HOH A . C 3 HOH 164 166 166 HOH HOH A . C 3 HOH 165 167 167 HOH HOH A . C 3 HOH 166 168 168 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 187 ? MET SELENOMETHIONINE 2 A MSE 9 A MSE 192 ? MET SELENOMETHIONINE 3 A MSE 53 A MSE 236 ? MET SELENOMETHIONINE 4 A MSE 82 A MSE 265 ? MET SELENOMETHIONINE 5 A MSE 91 A MSE 274 ? MET SELENOMETHIONINE 6 A MSE 105 A MSE 288 ? MET SELENOMETHIONINE 7 A MSE 136 A MSE 319 ? MET SELENOMETHIONINE 8 A MSE 193 A MSE 376 ? MET SELENOMETHIONINE 9 A MSE 235 A MSE 418 ? MET SELENOMETHIONINE 10 A MSE 314 A MSE 497 ? MET SELENOMETHIONINE 11 A MSE 319 A MSE 502 ? MET SELENOMETHIONINE 12 A MSE 325 A MSE 508 ? MET SELENOMETHIONINE 13 A MSE 344 A MSE 527 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-08-23 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2015-12-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 4 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data reduction' . ? 2 SOLVE 'model building' . ? 3 REFMAC refinement 5.0 ? 4 HKL-2000 'data reduction' . ? 5 SCALEPACK 'data scaling' . ? 6 SOLVE phasing . ? 7 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NE A ARG 392 ? ? O A HOH 146 ? ? 0.50 2 1 CB A LYS 393 ? ? O A HOH 151 ? ? 0.58 3 1 CA A LYS 393 ? ? O A HOH 151 ? ? 0.99 4 1 CD A ARG 392 ? ? O A HOH 146 ? ? 1.44 5 1 CG A LYS 393 ? ? O A HOH 151 ? ? 1.72 6 1 CZ A ARG 392 ? ? O A HOH 146 ? ? 1.80 7 1 OD1 A ASP 500 ? ? O A HOH 18 ? ? 1.87 8 1 "O3'" A ADP 998 ? ? O A HOH 113 ? ? 1.91 9 1 N A ILE 453 ? ? O A HOH 161 ? ? 2.01 10 1 O A LEU 596 ? ? O A HOH 162 ? ? 2.02 11 1 CG1 A VAL 280 ? ? O A HOH 159 ? ? 2.09 12 1 OD2 A ASP 563 ? ? O A HOH 142 ? ? 2.10 13 1 C A LYS 393 ? ? O A HOH 151 ? ? 2.11 14 1 CG2 A VAL 280 ? ? O A HOH 51 ? ? 2.13 15 1 N A LYS 393 ? ? O A HOH 151 ? ? 2.13 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OG _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 SER _pdbx_validate_symm_contact.auth_seq_id_1 253 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 123 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_565 _pdbx_validate_symm_contact.dist 1.67 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 354 ? ? CG A ASP 354 ? ? OD2 A ASP 354 ? ? 123.98 118.30 5.68 0.90 N 2 1 CB A ASP 414 ? ? CG A ASP 414 ? ? OD2 A ASP 414 ? ? 125.52 118.30 7.22 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 186 ? ? -96.36 36.03 2 1 ASP A 197 ? ? -96.64 56.57 3 1 ARG A 220 ? ? 72.43 39.03 4 1 SER A 257 ? ? -148.73 -87.02 5 1 ARG A 259 ? ? 114.81 -5.12 6 1 PRO A 277 ? ? -69.10 80.27 7 1 ARG A 279 ? ? -50.72 91.74 8 1 ASN A 282 ? ? -97.45 58.26 9 1 ALA A 291 ? ? -76.20 41.30 10 1 THR A 320 ? ? 173.84 153.35 11 1 THR A 351 ? ? -176.14 142.55 12 1 ASN A 391 ? ? -178.05 141.32 13 1 ARG A 392 ? ? -40.42 77.87 14 1 LYS A 393 ? ? -123.46 -132.93 15 1 PHE A 395 ? ? -72.09 -132.41 16 1 LEU A 422 ? ? -33.34 113.28 17 1 SER A 479 ? ? -123.36 -57.11 18 1 GLU A 503 ? ? -49.84 103.80 19 1 PRO A 524 ? ? -38.45 117.48 20 1 THR A 561 ? ? -10.39 -73.98 21 1 ASN A 578 ? ? -105.30 -162.91 22 1 CYS A 586 ? ? 179.64 -177.52 23 1 SER A 606 ? ? -143.08 24.30 24 1 ASP A 608 ? ? -156.06 -158.54 25 1 ARG A 622 ? ? 153.75 32.61 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 206 ? CG ? A ARG 23 CG 2 1 Y 1 A ARG 206 ? CD ? A ARG 23 CD 3 1 Y 1 A ARG 206 ? NE ? A ARG 23 NE 4 1 Y 1 A ARG 206 ? CZ ? A ARG 23 CZ 5 1 Y 1 A ARG 206 ? NH1 ? A ARG 23 NH1 6 1 Y 1 A ARG 206 ? NH2 ? A ARG 23 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 184 ? A GLY 1 2 1 Y 1 A ARG 397 ? A ARG 214 3 1 Y 1 A GLU 398 ? A GLU 215 4 1 Y 1 A TYR 399 ? A TYR 216 5 1 Y 1 A PRO 400 ? A PRO 217 6 1 Y 1 A THR 401 ? A THR 218 7 1 Y 1 A ILE 402 ? A ILE 219 8 1 Y 1 A LYS 403 ? A LYS 220 9 1 Y 1 A GLN 404 ? A GLN 221 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 water HOH #