data_1YN3 # _entry.id 1YN3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YN3 pdb_00001yn3 10.2210/pdb1yn3/pdb RCSB RCSB031704 ? ? WWPDB D_1000031704 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YN3 _pdbx_database_status.recvd_initial_deposition_date 2005-01-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Geisbrecht, B.V.' 1 'Hamaoka, B.Y.' 2 'Perman, B.' 3 'Zemla, A.' 4 'Leahy, D.J.' 5 # _citation.id primary _citation.title 'The Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 280 _citation.page_first 17243 _citation.page_last 17250 _citation.year 2005 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15691839 _citation.pdbx_database_id_DOI 10.1074/jbc.M412311200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Geisbrecht, B.V.' 1 ? primary 'Hamaoka, B.Y.' 2 ? primary 'Perman, B.' 3 ? primary 'Zemla, A.' 4 ? primary 'Leahy, D.J.' 5 ? # _cell.entry_id 1YN3 _cell.length_a 64.116 _cell.length_b 64.116 _cell.length_c 141.706 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.pdbx_unique_axis ? _cell.Z_PDB 18 # _symmetry.entry_id 1YN3 _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 146 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'truncated cell surface protein map-w' 10810.184 2 ? V253I 'residues 160-254' ? 2 water nat water 18.015 304 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name EAP2 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSTVPYTITVNGTSQNILSNLTFNKNQNISYKDLEGKVKSVLESNRGITDVDLRLSKQAKYTVNFKNGTKKVIDLKSGIY TANLINSSDIKSININID ; _entity_poly.pdbx_seq_one_letter_code_can ;GSTVPYTITVNGTSQNILSNLTFNKNQNISYKDLEGKVKSVLESNRGITDVDLRLSKQAKYTVNFKNGTKKVIDLKSGIY TANLINSSDIKSININID ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 THR n 1 4 VAL n 1 5 PRO n 1 6 TYR n 1 7 THR n 1 8 ILE n 1 9 THR n 1 10 VAL n 1 11 ASN n 1 12 GLY n 1 13 THR n 1 14 SER n 1 15 GLN n 1 16 ASN n 1 17 ILE n 1 18 LEU n 1 19 SER n 1 20 ASN n 1 21 LEU n 1 22 THR n 1 23 PHE n 1 24 ASN n 1 25 LYS n 1 26 ASN n 1 27 GLN n 1 28 ASN n 1 29 ILE n 1 30 SER n 1 31 TYR n 1 32 LYS n 1 33 ASP n 1 34 LEU n 1 35 GLU n 1 36 GLY n 1 37 LYS n 1 38 VAL n 1 39 LYS n 1 40 SER n 1 41 VAL n 1 42 LEU n 1 43 GLU n 1 44 SER n 1 45 ASN n 1 46 ARG n 1 47 GLY n 1 48 ILE n 1 49 THR n 1 50 ASP n 1 51 VAL n 1 52 ASP n 1 53 LEU n 1 54 ARG n 1 55 LEU n 1 56 SER n 1 57 LYS n 1 58 GLN n 1 59 ALA n 1 60 LYS n 1 61 TYR n 1 62 THR n 1 63 VAL n 1 64 ASN n 1 65 PHE n 1 66 LYS n 1 67 ASN n 1 68 GLY n 1 69 THR n 1 70 LYS n 1 71 LYS n 1 72 VAL n 1 73 ILE n 1 74 ASP n 1 75 LEU n 1 76 LYS n 1 77 SER n 1 78 GLY n 1 79 ILE n 1 80 TYR n 1 81 THR n 1 82 ALA n 1 83 ASN n 1 84 LEU n 1 85 ILE n 1 86 ASN n 1 87 SER n 1 88 SER n 1 89 ASP n 1 90 ILE n 1 91 LYS n 1 92 SER n 1 93 ILE n 1 94 ASN n 1 95 ILE n 1 96 ASN n 1 97 ILE n 1 98 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Mu50 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28 derivative' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MAP1_STAAM _struct_ref.pdbx_db_accession Q99QS1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VPYTITVNGTSQNILSNLTFNKNQNISYKDLEGKVKSVLESNRGITDVDLRLSKQAKYTVNFKNGTKKVIDLKSGIYTAN LINSSDIKSININVD ; _struct_ref.pdbx_align_begin 160 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YN3 A 4 ? 98 ? Q99QS1 160 ? 254 ? 160 254 2 1 1YN3 B 4 ? 98 ? Q99QS1 160 ? 254 ? 160 254 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YN3 GLY A 1 ? UNP Q99QS1 ? ? 'cloning artifact' 157 1 1 1YN3 SER A 2 ? UNP Q99QS1 ? ? 'cloning artifact' 158 2 1 1YN3 THR A 3 ? UNP Q99QS1 ? ? 'cloning artifact' 159 3 1 1YN3 ILE A 97 ? UNP Q99QS1 VAL 253 'engineered mutation' 253 4 2 1YN3 GLY B 1 ? UNP Q99QS1 ? ? 'cloning artifact' 157 5 2 1YN3 SER B 2 ? UNP Q99QS1 ? ? 'cloning artifact' 158 6 2 1YN3 THR B 3 ? UNP Q99QS1 ? ? 'cloning artifact' 159 7 2 1YN3 ILE B 97 ? UNP Q99QS1 VAL 253 'engineered mutation' 253 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YN3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pdbx_details 'PEG 8000, ammonium sulfate, MES, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9793 # _reflns.entry_id 1YN3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.35 _reflns.number_obs 40720 _reflns.number_all ? _reflns.percent_possible_obs 88.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 13.9 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.35 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 70.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YN3 _refine.ls_number_reflns_obs 40720 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 546804.14 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.87 _refine.ls_d_res_high 1.35 _refine.ls_percent_reflns_obs 85.1 _refine.ls_R_factor_obs 0.218 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free 0.23 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2031 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 16.4 _refine.aniso_B[1][1] 0.18 _refine.aniso_B[2][2] 0.18 _refine.aniso_B[3][3] -0.36 _refine.aniso_B[1][2] 0.55 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.363177 _refine.solvent_model_param_bsol 46.4792 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'EapH1, pdb entry 1YN5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YN3 _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.11 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.18 _refine_analyze.Luzzati_sigma_a_free 0.10 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1520 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 304 _refine_hist.number_atoms_total 1824 _refine_hist.d_res_high 1.35 _refine_hist.d_res_low 29.87 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.0 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.30 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.29 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.09 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.01 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.92 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.35 _refine_ls_shell.d_res_low 1.43 _refine_ls_shell.number_reflns_R_work 4897 _refine_ls_shell.R_factor_R_work 0.277 _refine_ls_shell.percent_reflns_obs 64.7 _refine_ls_shell.R_factor_R_free 0.283 _refine_ls_shell.R_factor_R_free_error 0.018 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 262 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' # _struct.entry_id 1YN3 _struct.title 'Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YN3 _struct_keywords.pdbx_keywords 'TOXIN, PROTEIN BINDING' _struct_keywords.text 'Virulence-factor, Toxin, Extracellular-adherence protein, Staphylococcus, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 31 ? GLY A 47 ? TYR A 187 GLY A 203 1 ? 17 HELX_P HELX_P2 2 THR A 49 ? SER A 56 ? THR A 205 SER A 212 1 ? 8 HELX_P HELX_P3 3 TYR B 31 ? GLY B 47 ? TYR B 187 GLY B 203 1 ? 17 HELX_P HELX_P4 4 THR B 49 ? SER B 56 ? THR B 205 SER B 212 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 5 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 17 ? PHE A 23 ? ILE A 173 PHE A 179 A 2 SER A 2 ? VAL A 10 ? SER A 158 VAL A 166 A 3 ILE A 90 ? ILE A 97 ? ILE A 246 ILE A 253 A 4 ALA A 59 ? PHE A 65 ? ALA A 215 PHE A 221 A 5 LYS A 70 ? ASP A 74 ? LYS A 226 ASP A 230 B 1 ASN A 28 ? SER A 30 ? ASN A 184 SER A 186 B 2 LEU A 84 ? ASN A 86 ? LEU A 240 ASN A 242 C 1 ILE B 17 ? PHE B 23 ? ILE B 173 PHE B 179 C 2 SER B 2 ? VAL B 10 ? SER B 158 VAL B 166 C 3 ILE B 90 ? ILE B 97 ? ILE B 246 ILE B 253 C 4 ALA B 59 ? PHE B 65 ? ALA B 215 PHE B 221 C 5 LYS B 70 ? ASP B 74 ? LYS B 226 ASP B 230 D 1 ASN B 28 ? SER B 30 ? ASN B 184 SER B 186 D 2 LEU B 84 ? ASN B 86 ? LEU B 240 ASN B 242 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 21 ? O LEU A 177 N VAL A 4 ? N VAL A 160 A 2 3 N THR A 7 ? N THR A 163 O ILE A 95 ? O ILE A 251 A 3 4 O ASN A 96 ? O ASN A 252 N LYS A 60 ? N LYS A 216 A 4 5 N TYR A 61 ? N TYR A 217 O ILE A 73 ? O ILE A 229 B 1 2 N ILE A 29 ? N ILE A 185 O ILE A 85 ? O ILE A 241 C 1 2 O LEU B 21 ? O LEU B 177 N VAL B 4 ? N VAL B 160 C 2 3 N THR B 9 ? N THR B 165 O ILE B 95 ? O ILE B 251 C 3 4 O ASN B 96 ? O ASN B 252 N LYS B 60 ? N LYS B 216 C 4 5 N TYR B 61 ? N TYR B 217 O ILE B 73 ? O ILE B 229 D 1 2 N ILE B 29 ? N ILE B 185 O ILE B 85 ? O ILE B 241 # _atom_sites.entry_id 1YN3 _atom_sites.fract_transf_matrix[1][1] 0.015597 _atom_sites.fract_transf_matrix[1][2] 0.009005 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018010 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007057 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 157 157 GLY GLY A . n A 1 2 SER 2 158 158 SER SER A . n A 1 3 THR 3 159 159 THR THR A . n A 1 4 VAL 4 160 160 VAL VAL A . n A 1 5 PRO 5 161 161 PRO PRO A . n A 1 6 TYR 6 162 162 TYR TYR A . n A 1 7 THR 7 163 163 THR THR A . n A 1 8 ILE 8 164 164 ILE ILE A . n A 1 9 THR 9 165 165 THR THR A . n A 1 10 VAL 10 166 166 VAL VAL A . n A 1 11 ASN 11 167 167 ASN ASN A . n A 1 12 GLY 12 168 168 GLY GLY A . n A 1 13 THR 13 169 169 THR THR A . n A 1 14 SER 14 170 170 SER SER A . n A 1 15 GLN 15 171 171 GLN GLN A . n A 1 16 ASN 16 172 172 ASN ASN A . n A 1 17 ILE 17 173 173 ILE ILE A . n A 1 18 LEU 18 174 174 LEU LEU A . n A 1 19 SER 19 175 175 SER SER A . n A 1 20 ASN 20 176 176 ASN ASN A . n A 1 21 LEU 21 177 177 LEU LEU A . n A 1 22 THR 22 178 178 THR THR A . n A 1 23 PHE 23 179 179 PHE PHE A . n A 1 24 ASN 24 180 180 ASN ASN A . n A 1 25 LYS 25 181 181 LYS LYS A . n A 1 26 ASN 26 182 182 ASN ASN A . n A 1 27 GLN 27 183 183 GLN GLN A . n A 1 28 ASN 28 184 184 ASN ASN A . n A 1 29 ILE 29 185 185 ILE ILE A . n A 1 30 SER 30 186 186 SER SER A . n A 1 31 TYR 31 187 187 TYR TYR A . n A 1 32 LYS 32 188 188 LYS LYS A . n A 1 33 ASP 33 189 189 ASP ASP A . n A 1 34 LEU 34 190 190 LEU LEU A . n A 1 35 GLU 35 191 191 GLU GLU A . n A 1 36 GLY 36 192 192 GLY GLY A . n A 1 37 LYS 37 193 193 LYS LYS A . n A 1 38 VAL 38 194 194 VAL VAL A . n A 1 39 LYS 39 195 195 LYS LYS A . n A 1 40 SER 40 196 196 SER SER A . n A 1 41 VAL 41 197 197 VAL VAL A . n A 1 42 LEU 42 198 198 LEU LEU A . n A 1 43 GLU 43 199 199 GLU GLU A . n A 1 44 SER 44 200 200 SER SER A . n A 1 45 ASN 45 201 201 ASN ASN A . n A 1 46 ARG 46 202 202 ARG ARG A . n A 1 47 GLY 47 203 203 GLY GLY A . n A 1 48 ILE 48 204 204 ILE ILE A . n A 1 49 THR 49 205 205 THR THR A . n A 1 50 ASP 50 206 206 ASP ASP A . n A 1 51 VAL 51 207 207 VAL VAL A . n A 1 52 ASP 52 208 208 ASP ASP A . n A 1 53 LEU 53 209 209 LEU LEU A . n A 1 54 ARG 54 210 210 ARG ARG A . n A 1 55 LEU 55 211 211 LEU LEU A . n A 1 56 SER 56 212 212 SER SER A . n A 1 57 LYS 57 213 213 LYS LYS A . n A 1 58 GLN 58 214 214 GLN GLN A . n A 1 59 ALA 59 215 215 ALA ALA A . n A 1 60 LYS 60 216 216 LYS LYS A . n A 1 61 TYR 61 217 217 TYR TYR A . n A 1 62 THR 62 218 218 THR THR A . n A 1 63 VAL 63 219 219 VAL VAL A . n A 1 64 ASN 64 220 220 ASN ASN A . n A 1 65 PHE 65 221 221 PHE PHE A . n A 1 66 LYS 66 222 222 LYS LYS A . n A 1 67 ASN 67 223 223 ASN ASN A . n A 1 68 GLY 68 224 224 GLY GLY A . n A 1 69 THR 69 225 225 THR THR A . n A 1 70 LYS 70 226 226 LYS LYS A . n A 1 71 LYS 71 227 227 LYS LYS A . n A 1 72 VAL 72 228 228 VAL VAL A . n A 1 73 ILE 73 229 229 ILE ILE A . n A 1 74 ASP 74 230 230 ASP ASP A . n A 1 75 LEU 75 231 231 LEU LEU A . n A 1 76 LYS 76 232 232 LYS LYS A . n A 1 77 SER 77 233 233 SER SER A . n A 1 78 GLY 78 234 234 GLY GLY A . n A 1 79 ILE 79 235 235 ILE ILE A . n A 1 80 TYR 80 236 236 TYR TYR A . n A 1 81 THR 81 237 237 THR THR A . n A 1 82 ALA 82 238 238 ALA ALA A . n A 1 83 ASN 83 239 239 ASN ASN A . n A 1 84 LEU 84 240 240 LEU LEU A . n A 1 85 ILE 85 241 241 ILE ILE A . n A 1 86 ASN 86 242 242 ASN ASN A . n A 1 87 SER 87 243 243 SER SER A . n A 1 88 SER 88 244 244 SER SER A . n A 1 89 ASP 89 245 245 ASP ASP A . n A 1 90 ILE 90 246 246 ILE ILE A . n A 1 91 LYS 91 247 247 LYS LYS A . n A 1 92 SER 92 248 248 SER SER A . n A 1 93 ILE 93 249 249 ILE ILE A . n A 1 94 ASN 94 250 250 ASN ASN A . n A 1 95 ILE 95 251 251 ILE ILE A . n A 1 96 ASN 96 252 252 ASN ASN A . n A 1 97 ILE 97 253 253 ILE ILE A . n A 1 98 ASP 98 254 254 ASP ASP A . n B 1 1 GLY 1 157 157 GLY GLY B . n B 1 2 SER 2 158 158 SER SER B . n B 1 3 THR 3 159 159 THR THR B . n B 1 4 VAL 4 160 160 VAL VAL B . n B 1 5 PRO 5 161 161 PRO PRO B . n B 1 6 TYR 6 162 162 TYR TYR B . n B 1 7 THR 7 163 163 THR THR B . n B 1 8 ILE 8 164 164 ILE ILE B . n B 1 9 THR 9 165 165 THR THR B . n B 1 10 VAL 10 166 166 VAL VAL B . n B 1 11 ASN 11 167 167 ASN ASN B . n B 1 12 GLY 12 168 168 GLY GLY B . n B 1 13 THR 13 169 169 THR THR B . n B 1 14 SER 14 170 170 SER SER B . n B 1 15 GLN 15 171 171 GLN GLN B . n B 1 16 ASN 16 172 172 ASN ASN B . n B 1 17 ILE 17 173 173 ILE ILE B . n B 1 18 LEU 18 174 174 LEU LEU B . n B 1 19 SER 19 175 175 SER SER B . n B 1 20 ASN 20 176 176 ASN ASN B . n B 1 21 LEU 21 177 177 LEU LEU B . n B 1 22 THR 22 178 178 THR THR B . n B 1 23 PHE 23 179 179 PHE PHE B . n B 1 24 ASN 24 180 180 ASN ASN B . n B 1 25 LYS 25 181 181 LYS LYS B . n B 1 26 ASN 26 182 182 ASN ASN B . n B 1 27 GLN 27 183 183 GLN GLN B . n B 1 28 ASN 28 184 184 ASN ASN B . n B 1 29 ILE 29 185 185 ILE ILE B . n B 1 30 SER 30 186 186 SER SER B . n B 1 31 TYR 31 187 187 TYR TYR B . n B 1 32 LYS 32 188 188 LYS LYS B . n B 1 33 ASP 33 189 189 ASP ASP B . n B 1 34 LEU 34 190 190 LEU LEU B . n B 1 35 GLU 35 191 191 GLU GLU B . n B 1 36 GLY 36 192 192 GLY GLY B . n B 1 37 LYS 37 193 193 LYS LYS B . n B 1 38 VAL 38 194 194 VAL VAL B . n B 1 39 LYS 39 195 195 LYS LYS B . n B 1 40 SER 40 196 196 SER SER B . n B 1 41 VAL 41 197 197 VAL VAL B . n B 1 42 LEU 42 198 198 LEU LEU B . n B 1 43 GLU 43 199 199 GLU GLU B . n B 1 44 SER 44 200 200 SER SER B . n B 1 45 ASN 45 201 201 ASN ASN B . n B 1 46 ARG 46 202 202 ARG ARG B . n B 1 47 GLY 47 203 203 GLY GLY B . n B 1 48 ILE 48 204 204 ILE ILE B . n B 1 49 THR 49 205 205 THR THR B . n B 1 50 ASP 50 206 206 ASP ASP B . n B 1 51 VAL 51 207 207 VAL VAL B . n B 1 52 ASP 52 208 208 ASP ASP B . n B 1 53 LEU 53 209 209 LEU LEU B . n B 1 54 ARG 54 210 210 ARG ARG B . n B 1 55 LEU 55 211 211 LEU LEU B . n B 1 56 SER 56 212 212 SER SER B . n B 1 57 LYS 57 213 213 LYS LYS B . n B 1 58 GLN 58 214 214 GLN GLN B . n B 1 59 ALA 59 215 215 ALA ALA B . n B 1 60 LYS 60 216 216 LYS LYS B . n B 1 61 TYR 61 217 217 TYR TYR B . n B 1 62 THR 62 218 218 THR THR B . n B 1 63 VAL 63 219 219 VAL VAL B . n B 1 64 ASN 64 220 220 ASN ASN B . n B 1 65 PHE 65 221 221 PHE PHE B . n B 1 66 LYS 66 222 222 LYS LYS B . n B 1 67 ASN 67 223 223 ASN ASN B . n B 1 68 GLY 68 224 224 GLY GLY B . n B 1 69 THR 69 225 225 THR THR B . n B 1 70 LYS 70 226 226 LYS LYS B . n B 1 71 LYS 71 227 227 LYS LYS B . n B 1 72 VAL 72 228 228 VAL VAL B . n B 1 73 ILE 73 229 229 ILE ILE B . n B 1 74 ASP 74 230 230 ASP ASP B . n B 1 75 LEU 75 231 231 LEU LEU B . n B 1 76 LYS 76 232 232 LYS LYS B . n B 1 77 SER 77 233 233 SER SER B . n B 1 78 GLY 78 234 234 GLY GLY B . n B 1 79 ILE 79 235 235 ILE ILE B . n B 1 80 TYR 80 236 236 TYR TYR B . n B 1 81 THR 81 237 237 THR THR B . n B 1 82 ALA 82 238 238 ALA ALA B . n B 1 83 ASN 83 239 239 ASN ASN B . n B 1 84 LEU 84 240 240 LEU LEU B . n B 1 85 ILE 85 241 241 ILE ILE B . n B 1 86 ASN 86 242 242 ASN ASN B . n B 1 87 SER 87 243 243 SER SER B . n B 1 88 SER 88 244 244 SER SER B . n B 1 89 ASP 89 245 245 ASP ASP B . n B 1 90 ILE 90 246 246 ILE ILE B . n B 1 91 LYS 91 247 247 LYS LYS B . n B 1 92 SER 92 248 248 SER SER B . n B 1 93 ILE 93 249 249 ILE ILE B . n B 1 94 ASN 94 250 250 ASN ASN B . n B 1 95 ILE 95 251 251 ILE ILE B . n B 1 96 ASN 96 252 252 ASN ASN B . n B 1 97 ILE 97 253 253 ILE ILE B . n B 1 98 ASP 98 254 254 ASP ASP B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 255 3 HOH HOH A . C 2 HOH 2 256 4 HOH HOH A . C 2 HOH 3 257 5 HOH HOH A . C 2 HOH 4 258 7 HOH HOH A . C 2 HOH 5 259 10 HOH HOH A . C 2 HOH 6 260 11 HOH HOH A . C 2 HOH 7 261 14 HOH HOH A . C 2 HOH 8 262 15 HOH HOH A . C 2 HOH 9 263 18 HOH HOH A . C 2 HOH 10 264 19 HOH HOH A . C 2 HOH 11 265 20 HOH HOH A . C 2 HOH 12 266 21 HOH HOH A . C 2 HOH 13 267 23 HOH HOH A . C 2 HOH 14 268 24 HOH HOH A . C 2 HOH 15 269 26 HOH HOH A . C 2 HOH 16 270 30 HOH HOH A . C 2 HOH 17 271 33 HOH HOH A . C 2 HOH 18 272 35 HOH HOH A . C 2 HOH 19 273 36 HOH HOH A . C 2 HOH 20 274 37 HOH HOH A . C 2 HOH 21 275 38 HOH HOH A . C 2 HOH 22 276 39 HOH HOH A . C 2 HOH 23 277 41 HOH HOH A . C 2 HOH 24 278 43 HOH HOH A . C 2 HOH 25 279 44 HOH HOH A . C 2 HOH 26 280 46 HOH HOH A . C 2 HOH 27 281 50 HOH HOH A . C 2 HOH 28 282 51 HOH HOH A . C 2 HOH 29 283 52 HOH HOH A . C 2 HOH 30 284 55 HOH HOH A . C 2 HOH 31 285 57 HOH HOH A . C 2 HOH 32 286 59 HOH HOH A . C 2 HOH 33 287 61 HOH HOH A . C 2 HOH 34 288 63 HOH HOH A . C 2 HOH 35 289 65 HOH HOH A . C 2 HOH 36 290 66 HOH HOH A . C 2 HOH 37 291 67 HOH HOH A . C 2 HOH 38 292 70 HOH HOH A . C 2 HOH 39 293 73 HOH HOH A . C 2 HOH 40 294 74 HOH HOH A . C 2 HOH 41 295 77 HOH HOH A . C 2 HOH 42 296 78 HOH HOH A . C 2 HOH 43 297 79 HOH HOH A . C 2 HOH 44 298 84 HOH HOH A . C 2 HOH 45 299 87 HOH HOH A . C 2 HOH 46 300 88 HOH HOH A . C 2 HOH 47 301 93 HOH HOH A . C 2 HOH 48 302 94 HOH HOH A . C 2 HOH 49 303 95 HOH HOH A . C 2 HOH 50 304 97 HOH HOH A . C 2 HOH 51 305 100 HOH HOH A . C 2 HOH 52 306 101 HOH HOH A . C 2 HOH 53 307 105 HOH HOH A . C 2 HOH 54 308 108 HOH HOH A . C 2 HOH 55 309 109 HOH HOH A . C 2 HOH 56 310 110 HOH HOH A . C 2 HOH 57 311 111 HOH HOH A . C 2 HOH 58 312 113 HOH HOH A . C 2 HOH 59 313 114 HOH HOH A . C 2 HOH 60 314 117 HOH HOH A . C 2 HOH 61 315 119 HOH HOH A . C 2 HOH 62 316 122 HOH HOH A . C 2 HOH 63 317 125 HOH HOH A . C 2 HOH 64 318 128 HOH HOH A . C 2 HOH 65 319 130 HOH HOH A . C 2 HOH 66 320 134 HOH HOH A . C 2 HOH 67 321 135 HOH HOH A . C 2 HOH 68 322 139 HOH HOH A . C 2 HOH 69 323 140 HOH HOH A . C 2 HOH 70 324 142 HOH HOH A . C 2 HOH 71 325 143 HOH HOH A . C 2 HOH 72 326 146 HOH HOH A . C 2 HOH 73 327 148 HOH HOH A . C 2 HOH 74 328 151 HOH HOH A . C 2 HOH 75 329 153 HOH HOH A . C 2 HOH 76 330 155 HOH HOH A . C 2 HOH 77 331 156 HOH HOH A . C 2 HOH 78 332 158 HOH HOH A . C 2 HOH 79 333 159 HOH HOH A . C 2 HOH 80 334 160 HOH HOH A . C 2 HOH 81 335 161 HOH HOH A . C 2 HOH 82 336 164 HOH HOH A . C 2 HOH 83 337 166 HOH HOH A . C 2 HOH 84 338 168 HOH HOH A . C 2 HOH 85 339 170 HOH HOH A . C 2 HOH 86 340 175 HOH HOH A . C 2 HOH 87 341 176 HOH HOH A . C 2 HOH 88 342 177 HOH HOH A . C 2 HOH 89 343 178 HOH HOH A . C 2 HOH 90 344 181 HOH HOH A . C 2 HOH 91 345 182 HOH HOH A . C 2 HOH 92 346 183 HOH HOH A . C 2 HOH 93 347 184 HOH HOH A . C 2 HOH 94 348 185 HOH HOH A . C 2 HOH 95 349 188 HOH HOH A . C 2 HOH 96 350 190 HOH HOH A . C 2 HOH 97 351 192 HOH HOH A . C 2 HOH 98 352 193 HOH HOH A . C 2 HOH 99 353 194 HOH HOH A . C 2 HOH 100 354 196 HOH HOH A . C 2 HOH 101 355 197 HOH HOH A . C 2 HOH 102 356 202 HOH HOH A . C 2 HOH 103 357 203 HOH HOH A . C 2 HOH 104 358 207 HOH HOH A . C 2 HOH 105 359 208 HOH HOH A . C 2 HOH 106 360 209 HOH HOH A . C 2 HOH 107 361 210 HOH HOH A . C 2 HOH 108 362 212 HOH HOH A . C 2 HOH 109 363 214 HOH HOH A . C 2 HOH 110 364 218 HOH HOH A . C 2 HOH 111 365 220 HOH HOH A . C 2 HOH 112 366 222 HOH HOH A . C 2 HOH 113 367 224 HOH HOH A . C 2 HOH 114 368 225 HOH HOH A . C 2 HOH 115 369 226 HOH HOH A . C 2 HOH 116 370 228 HOH HOH A . C 2 HOH 117 371 229 HOH HOH A . C 2 HOH 118 372 231 HOH HOH A . C 2 HOH 119 373 234 HOH HOH A . C 2 HOH 120 374 235 HOH HOH A . C 2 HOH 121 375 236 HOH HOH A . C 2 HOH 122 376 240 HOH HOH A . C 2 HOH 123 377 243 HOH HOH A . C 2 HOH 124 378 244 HOH HOH A . C 2 HOH 125 379 246 HOH HOH A . C 2 HOH 126 380 247 HOH HOH A . C 2 HOH 127 381 248 HOH HOH A . C 2 HOH 128 382 249 HOH HOH A . C 2 HOH 129 383 251 HOH HOH A . C 2 HOH 130 384 255 HOH HOH A . C 2 HOH 131 385 257 HOH HOH A . C 2 HOH 132 386 258 HOH HOH A . C 2 HOH 133 387 263 HOH HOH A . C 2 HOH 134 388 264 HOH HOH A . C 2 HOH 135 389 266 HOH HOH A . C 2 HOH 136 390 268 HOH HOH A . C 2 HOH 137 391 269 HOH HOH A . C 2 HOH 138 392 271 HOH HOH A . C 2 HOH 139 393 272 HOH HOH A . C 2 HOH 140 394 278 HOH HOH A . C 2 HOH 141 395 287 HOH HOH A . C 2 HOH 142 396 289 HOH HOH A . C 2 HOH 143 397 290 HOH HOH A . C 2 HOH 144 398 293 HOH HOH A . C 2 HOH 145 399 294 HOH HOH A . C 2 HOH 146 400 301 HOH HOH A . C 2 HOH 147 401 302 HOH HOH A . C 2 HOH 148 402 303 HOH HOH A . C 2 HOH 149 403 304 HOH HOH A . D 2 HOH 1 255 1 HOH HOH B . D 2 HOH 2 256 2 HOH HOH B . D 2 HOH 3 257 6 HOH HOH B . D 2 HOH 4 258 8 HOH HOH B . D 2 HOH 5 259 9 HOH HOH B . D 2 HOH 6 260 12 HOH HOH B . D 2 HOH 7 261 13 HOH HOH B . D 2 HOH 8 262 16 HOH HOH B . D 2 HOH 9 263 17 HOH HOH B . D 2 HOH 10 264 22 HOH HOH B . D 2 HOH 11 265 25 HOH HOH B . D 2 HOH 12 266 27 HOH HOH B . D 2 HOH 13 267 28 HOH HOH B . D 2 HOH 14 268 29 HOH HOH B . D 2 HOH 15 269 31 HOH HOH B . D 2 HOH 16 270 32 HOH HOH B . D 2 HOH 17 271 34 HOH HOH B . D 2 HOH 18 272 40 HOH HOH B . D 2 HOH 19 273 42 HOH HOH B . D 2 HOH 20 274 45 HOH HOH B . D 2 HOH 21 275 47 HOH HOH B . D 2 HOH 22 276 48 HOH HOH B . D 2 HOH 23 277 49 HOH HOH B . D 2 HOH 24 278 53 HOH HOH B . D 2 HOH 25 279 54 HOH HOH B . D 2 HOH 26 280 56 HOH HOH B . D 2 HOH 27 281 58 HOH HOH B . D 2 HOH 28 282 60 HOH HOH B . D 2 HOH 29 283 62 HOH HOH B . D 2 HOH 30 284 64 HOH HOH B . D 2 HOH 31 285 68 HOH HOH B . D 2 HOH 32 286 69 HOH HOH B . D 2 HOH 33 287 71 HOH HOH B . D 2 HOH 34 288 72 HOH HOH B . D 2 HOH 35 289 75 HOH HOH B . D 2 HOH 36 290 76 HOH HOH B . D 2 HOH 37 291 80 HOH HOH B . D 2 HOH 38 292 81 HOH HOH B . D 2 HOH 39 293 82 HOH HOH B . D 2 HOH 40 294 83 HOH HOH B . D 2 HOH 41 295 85 HOH HOH B . D 2 HOH 42 296 86 HOH HOH B . D 2 HOH 43 297 89 HOH HOH B . D 2 HOH 44 298 90 HOH HOH B . D 2 HOH 45 299 91 HOH HOH B . D 2 HOH 46 300 92 HOH HOH B . D 2 HOH 47 301 96 HOH HOH B . D 2 HOH 48 302 98 HOH HOH B . D 2 HOH 49 303 99 HOH HOH B . D 2 HOH 50 304 102 HOH HOH B . D 2 HOH 51 305 103 HOH HOH B . D 2 HOH 52 306 104 HOH HOH B . D 2 HOH 53 307 106 HOH HOH B . D 2 HOH 54 308 107 HOH HOH B . D 2 HOH 55 309 112 HOH HOH B . D 2 HOH 56 310 115 HOH HOH B . D 2 HOH 57 311 116 HOH HOH B . D 2 HOH 58 312 118 HOH HOH B . D 2 HOH 59 313 120 HOH HOH B . D 2 HOH 60 314 121 HOH HOH B . D 2 HOH 61 315 123 HOH HOH B . D 2 HOH 62 316 124 HOH HOH B . D 2 HOH 63 317 126 HOH HOH B . D 2 HOH 64 318 127 HOH HOH B . D 2 HOH 65 319 129 HOH HOH B . D 2 HOH 66 320 131 HOH HOH B . D 2 HOH 67 321 132 HOH HOH B . D 2 HOH 68 322 133 HOH HOH B . D 2 HOH 69 323 136 HOH HOH B . D 2 HOH 70 324 137 HOH HOH B . D 2 HOH 71 325 138 HOH HOH B . D 2 HOH 72 326 141 HOH HOH B . D 2 HOH 73 327 144 HOH HOH B . D 2 HOH 74 328 145 HOH HOH B . D 2 HOH 75 329 147 HOH HOH B . D 2 HOH 76 330 149 HOH HOH B . D 2 HOH 77 331 150 HOH HOH B . D 2 HOH 78 332 152 HOH HOH B . D 2 HOH 79 333 154 HOH HOH B . D 2 HOH 80 334 157 HOH HOH B . D 2 HOH 81 335 162 HOH HOH B . D 2 HOH 82 336 163 HOH HOH B . D 2 HOH 83 337 165 HOH HOH B . D 2 HOH 84 338 167 HOH HOH B . D 2 HOH 85 339 169 HOH HOH B . D 2 HOH 86 340 171 HOH HOH B . D 2 HOH 87 341 172 HOH HOH B . D 2 HOH 88 342 173 HOH HOH B . D 2 HOH 89 343 174 HOH HOH B . D 2 HOH 90 344 179 HOH HOH B . D 2 HOH 91 345 180 HOH HOH B . D 2 HOH 92 346 186 HOH HOH B . D 2 HOH 93 347 187 HOH HOH B . D 2 HOH 94 348 189 HOH HOH B . D 2 HOH 95 349 191 HOH HOH B . D 2 HOH 96 350 195 HOH HOH B . D 2 HOH 97 351 198 HOH HOH B . D 2 HOH 98 352 199 HOH HOH B . D 2 HOH 99 353 200 HOH HOH B . D 2 HOH 100 354 201 HOH HOH B . D 2 HOH 101 355 204 HOH HOH B . D 2 HOH 102 356 205 HOH HOH B . D 2 HOH 103 357 206 HOH HOH B . D 2 HOH 104 358 211 HOH HOH B . D 2 HOH 105 359 213 HOH HOH B . D 2 HOH 106 360 215 HOH HOH B . D 2 HOH 107 361 216 HOH HOH B . D 2 HOH 108 362 217 HOH HOH B . D 2 HOH 109 363 219 HOH HOH B . D 2 HOH 110 364 221 HOH HOH B . D 2 HOH 111 365 223 HOH HOH B . D 2 HOH 112 366 227 HOH HOH B . D 2 HOH 113 367 230 HOH HOH B . D 2 HOH 114 368 232 HOH HOH B . D 2 HOH 115 369 233 HOH HOH B . D 2 HOH 116 370 237 HOH HOH B . D 2 HOH 117 371 238 HOH HOH B . D 2 HOH 118 372 239 HOH HOH B . D 2 HOH 119 373 241 HOH HOH B . D 2 HOH 120 374 242 HOH HOH B . D 2 HOH 121 375 245 HOH HOH B . D 2 HOH 122 376 250 HOH HOH B . D 2 HOH 123 377 252 HOH HOH B . D 2 HOH 124 378 253 HOH HOH B . D 2 HOH 125 379 254 HOH HOH B . D 2 HOH 126 380 256 HOH HOH B . D 2 HOH 127 381 259 HOH HOH B . D 2 HOH 128 382 260 HOH HOH B . D 2 HOH 129 383 261 HOH HOH B . D 2 HOH 130 384 262 HOH HOH B . D 2 HOH 131 385 265 HOH HOH B . D 2 HOH 132 386 267 HOH HOH B . D 2 HOH 133 387 270 HOH HOH B . D 2 HOH 134 388 273 HOH HOH B . D 2 HOH 135 389 274 HOH HOH B . D 2 HOH 136 390 275 HOH HOH B . D 2 HOH 137 391 276 HOH HOH B . D 2 HOH 138 392 277 HOH HOH B . D 2 HOH 139 393 279 HOH HOH B . D 2 HOH 140 394 280 HOH HOH B . D 2 HOH 141 395 281 HOH HOH B . D 2 HOH 142 396 282 HOH HOH B . D 2 HOH 143 397 283 HOH HOH B . D 2 HOH 144 398 284 HOH HOH B . D 2 HOH 145 399 285 HOH HOH B . D 2 HOH 146 400 286 HOH HOH B . D 2 HOH 147 401 288 HOH HOH B . D 2 HOH 148 402 291 HOH HOH B . D 2 HOH 149 403 292 HOH HOH B . D 2 HOH 150 404 295 HOH HOH B . D 2 HOH 151 405 296 HOH HOH B . D 2 HOH 152 406 297 HOH HOH B . D 2 HOH 153 407 298 HOH HOH B . D 2 HOH 154 408 299 HOH HOH B . D 2 HOH 155 409 300 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-01 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 MOLREP phasing . ? 3 CNS refinement 1.0 ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A THR 237 ? ? N A ASN 239 ? ? 1.75 2 1 ND2 B ASN 252 ? ? O B HOH 384 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CA A ALA 238 ? ? C A ALA 238 ? ? 1.335 1.525 -0.190 0.026 N 2 1 N A ASN 239 ? ? CA A ASN 239 ? ? 1.199 1.459 -0.260 0.020 N 3 1 C A ASN 239 ? ? O A ASN 239 ? ? 1.617 1.229 0.388 0.019 N 4 1 N A LEU 240 ? ? CA A LEU 240 ? ? 1.847 1.459 0.388 0.020 N 5 1 C B ASP 206 ? ? O B ASP 206 ? ? 0.982 1.229 -0.247 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A ALA 238 ? ? C A ALA 238 ? ? O A ALA 238 ? ? 138.70 120.10 18.60 2.10 N 2 1 CA A ALA 238 ? ? C A ALA 238 ? ? N A ASN 239 ? ? 97.70 117.20 -19.50 2.20 Y 3 1 CA A ASN 239 ? ? C A ASN 239 ? ? O A ASN 239 ? ? 105.69 120.10 -14.41 2.10 N 4 1 O A ASN 239 ? ? C A ASN 239 ? ? N A LEU 240 ? ? 145.53 122.70 22.83 1.60 Y 5 1 C A ASN 239 ? ? N A LEU 240 ? ? CA A LEU 240 ? ? 141.94 121.70 20.24 2.50 Y 6 1 CB A LEU 240 ? ? CA A LEU 240 ? ? C A LEU 240 ? ? 124.52 110.20 14.32 1.90 N 7 1 O A LEU 240 ? ? C A LEU 240 ? ? N A ILE 241 ? ? 136.53 122.70 13.83 1.60 Y 8 1 CA B ASP 206 ? ? C B ASP 206 ? ? O B ASP 206 ? ? 137.41 120.10 17.31 2.10 N 9 1 O B ASP 206 ? ? C B ASP 206 ? ? N B VAL 207 ? ? 95.89 122.70 -26.81 1.60 Y 10 1 C B ASP 206 ? ? N B VAL 207 ? ? CA B VAL 207 ? ? 105.29 121.70 -16.41 2.50 Y 11 1 N B VAL 207 ? ? CA B VAL 207 ? ? CB B VAL 207 ? ? 97.38 111.50 -14.12 2.20 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 238 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -65.26 _pdbx_validate_torsion.psi 64.03 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ASP _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 206 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -13.77 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ASN 180 ? OD1 ? A ASN 24 OD1 2 1 Y 0 A ASP 206 ? OD1 ? A ASP 50 OD1 3 1 Y 0 B ASN 180 ? OD1 ? B ASN 24 OD1 4 1 Y 0 B ASP 206 ? OD1 ? B ASP 50 OD1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 LEU N N N N 148 LEU CA C N S 149 LEU C C N N 150 LEU O O N N 151 LEU CB C N N 152 LEU CG C N N 153 LEU CD1 C N N 154 LEU CD2 C N N 155 LEU OXT O N N 156 LEU H H N N 157 LEU H2 H N N 158 LEU HA H N N 159 LEU HB2 H N N 160 LEU HB3 H N N 161 LEU HG H N N 162 LEU HD11 H N N 163 LEU HD12 H N N 164 LEU HD13 H N N 165 LEU HD21 H N N 166 LEU HD22 H N N 167 LEU HD23 H N N 168 LEU HXT H N N 169 LYS N N N N 170 LYS CA C N S 171 LYS C C N N 172 LYS O O N N 173 LYS CB C N N 174 LYS CG C N N 175 LYS CD C N N 176 LYS CE C N N 177 LYS NZ N N N 178 LYS OXT O N N 179 LYS H H N N 180 LYS H2 H N N 181 LYS HA H N N 182 LYS HB2 H N N 183 LYS HB3 H N N 184 LYS HG2 H N N 185 LYS HG3 H N N 186 LYS HD2 H N N 187 LYS HD3 H N N 188 LYS HE2 H N N 189 LYS HE3 H N N 190 LYS HZ1 H N N 191 LYS HZ2 H N N 192 LYS HZ3 H N N 193 LYS HXT H N N 194 PHE N N N N 195 PHE CA C N S 196 PHE C C N N 197 PHE O O N N 198 PHE CB C N N 199 PHE CG C Y N 200 PHE CD1 C Y N 201 PHE CD2 C Y N 202 PHE CE1 C Y N 203 PHE CE2 C Y N 204 PHE CZ C Y N 205 PHE OXT O N N 206 PHE H H N N 207 PHE H2 H N N 208 PHE HA H N N 209 PHE HB2 H N N 210 PHE HB3 H N N 211 PHE HD1 H N N 212 PHE HD2 H N N 213 PHE HE1 H N N 214 PHE HE2 H N N 215 PHE HZ H N N 216 PHE HXT H N N 217 PRO N N N N 218 PRO CA C N S 219 PRO C C N N 220 PRO O O N N 221 PRO CB C N N 222 PRO CG C N N 223 PRO CD C N N 224 PRO OXT O N N 225 PRO H H N N 226 PRO HA H N N 227 PRO HB2 H N N 228 PRO HB3 H N N 229 PRO HG2 H N N 230 PRO HG3 H N N 231 PRO HD2 H N N 232 PRO HD3 H N N 233 PRO HXT H N N 234 SER N N N N 235 SER CA C N S 236 SER C C N N 237 SER O O N N 238 SER CB C N N 239 SER OG O N N 240 SER OXT O N N 241 SER H H N N 242 SER H2 H N N 243 SER HA H N N 244 SER HB2 H N N 245 SER HB3 H N N 246 SER HG H N N 247 SER HXT H N N 248 THR N N N N 249 THR CA C N S 250 THR C C N N 251 THR O O N N 252 THR CB C N R 253 THR OG1 O N N 254 THR CG2 C N N 255 THR OXT O N N 256 THR H H N N 257 THR H2 H N N 258 THR HA H N N 259 THR HB H N N 260 THR HG1 H N N 261 THR HG21 H N N 262 THR HG22 H N N 263 THR HG23 H N N 264 THR HXT H N N 265 TYR N N N N 266 TYR CA C N S 267 TYR C C N N 268 TYR O O N N 269 TYR CB C N N 270 TYR CG C Y N 271 TYR CD1 C Y N 272 TYR CD2 C Y N 273 TYR CE1 C Y N 274 TYR CE2 C Y N 275 TYR CZ C Y N 276 TYR OH O N N 277 TYR OXT O N N 278 TYR H H N N 279 TYR H2 H N N 280 TYR HA H N N 281 TYR HB2 H N N 282 TYR HB3 H N N 283 TYR HD1 H N N 284 TYR HD2 H N N 285 TYR HE1 H N N 286 TYR HE2 H N N 287 TYR HH H N N 288 TYR HXT H N N 289 VAL N N N N 290 VAL CA C N S 291 VAL C C N N 292 VAL O O N N 293 VAL CB C N N 294 VAL CG1 C N N 295 VAL CG2 C N N 296 VAL OXT O N N 297 VAL H H N N 298 VAL H2 H N N 299 VAL HA H N N 300 VAL HB H N N 301 VAL HG11 H N N 302 VAL HG12 H N N 303 VAL HG13 H N N 304 VAL HG21 H N N 305 VAL HG22 H N N 306 VAL HG23 H N N 307 VAL HXT H N N 308 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LEU N CA sing N N 139 LEU N H sing N N 140 LEU N H2 sing N N 141 LEU CA C sing N N 142 LEU CA CB sing N N 143 LEU CA HA sing N N 144 LEU C O doub N N 145 LEU C OXT sing N N 146 LEU CB CG sing N N 147 LEU CB HB2 sing N N 148 LEU CB HB3 sing N N 149 LEU CG CD1 sing N N 150 LEU CG CD2 sing N N 151 LEU CG HG sing N N 152 LEU CD1 HD11 sing N N 153 LEU CD1 HD12 sing N N 154 LEU CD1 HD13 sing N N 155 LEU CD2 HD21 sing N N 156 LEU CD2 HD22 sing N N 157 LEU CD2 HD23 sing N N 158 LEU OXT HXT sing N N 159 LYS N CA sing N N 160 LYS N H sing N N 161 LYS N H2 sing N N 162 LYS CA C sing N N 163 LYS CA CB sing N N 164 LYS CA HA sing N N 165 LYS C O doub N N 166 LYS C OXT sing N N 167 LYS CB CG sing N N 168 LYS CB HB2 sing N N 169 LYS CB HB3 sing N N 170 LYS CG CD sing N N 171 LYS CG HG2 sing N N 172 LYS CG HG3 sing N N 173 LYS CD CE sing N N 174 LYS CD HD2 sing N N 175 LYS CD HD3 sing N N 176 LYS CE NZ sing N N 177 LYS CE HE2 sing N N 178 LYS CE HE3 sing N N 179 LYS NZ HZ1 sing N N 180 LYS NZ HZ2 sing N N 181 LYS NZ HZ3 sing N N 182 LYS OXT HXT sing N N 183 PHE N CA sing N N 184 PHE N H sing N N 185 PHE N H2 sing N N 186 PHE CA C sing N N 187 PHE CA CB sing N N 188 PHE CA HA sing N N 189 PHE C O doub N N 190 PHE C OXT sing N N 191 PHE CB CG sing N N 192 PHE CB HB2 sing N N 193 PHE CB HB3 sing N N 194 PHE CG CD1 doub Y N 195 PHE CG CD2 sing Y N 196 PHE CD1 CE1 sing Y N 197 PHE CD1 HD1 sing N N 198 PHE CD2 CE2 doub Y N 199 PHE CD2 HD2 sing N N 200 PHE CE1 CZ doub Y N 201 PHE CE1 HE1 sing N N 202 PHE CE2 CZ sing Y N 203 PHE CE2 HE2 sing N N 204 PHE CZ HZ sing N N 205 PHE OXT HXT sing N N 206 PRO N CA sing N N 207 PRO N CD sing N N 208 PRO N H sing N N 209 PRO CA C sing N N 210 PRO CA CB sing N N 211 PRO CA HA sing N N 212 PRO C O doub N N 213 PRO C OXT sing N N 214 PRO CB CG sing N N 215 PRO CB HB2 sing N N 216 PRO CB HB3 sing N N 217 PRO CG CD sing N N 218 PRO CG HG2 sing N N 219 PRO CG HG3 sing N N 220 PRO CD HD2 sing N N 221 PRO CD HD3 sing N N 222 PRO OXT HXT sing N N 223 SER N CA sing N N 224 SER N H sing N N 225 SER N H2 sing N N 226 SER CA C sing N N 227 SER CA CB sing N N 228 SER CA HA sing N N 229 SER C O doub N N 230 SER C OXT sing N N 231 SER CB OG sing N N 232 SER CB HB2 sing N N 233 SER CB HB3 sing N N 234 SER OG HG sing N N 235 SER OXT HXT sing N N 236 THR N CA sing N N 237 THR N H sing N N 238 THR N H2 sing N N 239 THR CA C sing N N 240 THR CA CB sing N N 241 THR CA HA sing N N 242 THR C O doub N N 243 THR C OXT sing N N 244 THR CB OG1 sing N N 245 THR CB CG2 sing N N 246 THR CB HB sing N N 247 THR OG1 HG1 sing N N 248 THR CG2 HG21 sing N N 249 THR CG2 HG22 sing N N 250 THR CG2 HG23 sing N N 251 THR OXT HXT sing N N 252 TYR N CA sing N N 253 TYR N H sing N N 254 TYR N H2 sing N N 255 TYR CA C sing N N 256 TYR CA CB sing N N 257 TYR CA HA sing N N 258 TYR C O doub N N 259 TYR C OXT sing N N 260 TYR CB CG sing N N 261 TYR CB HB2 sing N N 262 TYR CB HB3 sing N N 263 TYR CG CD1 doub Y N 264 TYR CG CD2 sing Y N 265 TYR CD1 CE1 sing Y N 266 TYR CD1 HD1 sing N N 267 TYR CD2 CE2 doub Y N 268 TYR CD2 HD2 sing N N 269 TYR CE1 CZ doub Y N 270 TYR CE1 HE1 sing N N 271 TYR CE2 CZ sing Y N 272 TYR CE2 HE2 sing N N 273 TYR CZ OH sing N N 274 TYR OH HH sing N N 275 TYR OXT HXT sing N N 276 VAL N CA sing N N 277 VAL N H sing N N 278 VAL N H2 sing N N 279 VAL CA C sing N N 280 VAL CA CB sing N N 281 VAL CA HA sing N N 282 VAL C O doub N N 283 VAL C OXT sing N N 284 VAL CB CG1 sing N N 285 VAL CB CG2 sing N N 286 VAL CB HB sing N N 287 VAL CG1 HG11 sing N N 288 VAL CG1 HG12 sing N N 289 VAL CG1 HG13 sing N N 290 VAL CG2 HG21 sing N N 291 VAL CG2 HG22 sing N N 292 VAL CG2 HG23 sing N N 293 VAL OXT HXT sing N N 294 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YN5 _pdbx_initial_refinement_model.details 'EapH1, pdb entry 1YN5' #