HEADER OXIDOREDUCTASE 25-JAN-05 1YNQ TITLE ALDO-KETO REDUCTASE AKR11C1 FROM BACILLUS HALODURANS (HOLO FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXIDOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AKR11C1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS; SOURCE 3 ORGANISM_TAXID: 272558; SOURCE 4 STRAIN: C-125; SOURCE 5 GENE: BH1011; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ALDO-KETO REDUCTASE, AKR11C1, NADPH, BACILLUS HALODURANS, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.MARQUARDT,D.KOSTREWA,F.K.WINKLER,X.D.LI REVDAT 6 13-MAR-24 1YNQ 1 HETSYN REVDAT 5 29-JUL-20 1YNQ 1 COMPND REMARK SEQADV HET REVDAT 5 2 1 HETNAM HETSYN FORMUL LINK REVDAT 5 3 1 SITE ATOM REVDAT 4 11-OCT-17 1YNQ 1 REMARK REVDAT 3 13-JUL-11 1YNQ 1 VERSN REVDAT 2 24-FEB-09 1YNQ 1 VERSN REVDAT 1 06-DEC-05 1YNQ 0 JRNL AUTH T.MARQUARDT,D.KOSTREWA,R.BALAKRISHNAN,A.GASPERINA,C.KAMBACH, JRNL AUTH 2 A.PODJARNY,F.K.WINKLER,G.K.BALENDIRAN,X.D.LI JRNL TITL HIGH-RESOLUTION CRYSTAL STRUCTURE OF AKR11C1 FROM BACILLUS JRNL TITL 2 HALODURANS: AN NADPH-DEPENDENT 4-HYDROXY-2,3-TRANS-NONENAL JRNL TITL 3 REDUCTASE JRNL REF J.MOL.BIOL. V. 354 304 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 16242712 JRNL DOI 10.1016/J.JMB.2005.09.067 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 161130 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8499 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 11744 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE SET COUNT : 625 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4718 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 145 REMARK 3 SOLVENT ATOMS : 683 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : 0.62000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.045 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.046 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.027 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.409 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4957 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6711 ; 1.715 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 581 ; 5.629 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 241 ;34.541 ;23.817 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 885 ;12.533 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;12.134 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 732 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3668 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2312 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3362 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 528 ; 0.189 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 92 ; 0.208 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 47 ; 0.212 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2910 ; 2.458 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4689 ; 3.534 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2117 ; 5.072 ; 4.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2022 ; 6.622 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5027 ; 3.312 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 684 ; 8.900 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4880 ; 6.147 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YNQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000031726. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 169631 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 38.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 9.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50600 REMARK 200 R SYM FOR SHELL (I) : 0.50600 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: ISOMORPHOUS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (NH4)2SO4, LI2SO4, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.56100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.71700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.77150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.71700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.56100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.77150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: 2 BIOLOGICAL UNITS IN THE ASU (CHAIN A AND CHAIN B). CHAIN REMARK 300 B BOUND TO NADPH. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLY A 78 REMARK 465 ASN A 79 REMARK 465 ARG A 80 REMARK 465 PHE A 81 REMARK 465 GLU A 82 REMARK 465 GLN A 83 REMARK 465 GLY A 84 REMARK 465 LYS A 85 REMARK 465 GLU A 86 REMARK 465 GLY A 87 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 473 O HOH B 581 1.76 REMARK 500 O HOH A 482 O HOH A 600 1.77 REMARK 500 OE1 GLU A 297 O HOH A 593 1.86 REMARK 500 O HOH B 440 O HOH B 582 1.92 REMARK 500 O HOH A 346 O HOH A 584 2.08 REMARK 500 NE2 HIS B 282 O HOH B 550 2.10 REMARK 500 O HOH B 410 O HOH B 602 2.11 REMARK 500 O ARG B 206 O HOH B 588 2.16 REMARK 500 OE2 GLU A 158 O HOH A 594 2.17 REMARK 500 O HOH A 601 O HOH B 607 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 472 O HOH B 581 3555 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A -1 C MET A 1 N 0.175 REMARK 500 HIS B -1 C MET B 1 N 0.272 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS B -1 O - C - N ANGL. DEV. = -10.1 DEGREES REMARK 500 ASP B 10 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 MET B 34 CG - SD - CE ANGL. DEV. = -21.9 DEGREES REMARK 500 ARG B 80 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 23 -9.74 -54.20 REMARK 500 ARG A 67 21.39 -143.93 REMARK 500 LEU A 204 46.57 -108.01 REMARK 500 SER A 205 -159.03 -136.65 REMARK 500 TYR A 215 113.12 -160.18 REMARK 500 LEU A 216 -127.04 53.83 REMARK 500 ARG B 67 33.96 -148.74 REMARK 500 LEU B 204 68.96 -105.74 REMARK 500 SER B 205 -169.83 -163.24 REMARK 500 LEU B 216 -124.70 49.87 REMARK 500 ALA B 246 1.98 -67.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HIS B -1 15.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 299 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 181 OE2 REMARK 620 2 HOH A 340 O 114.5 REMARK 620 3 ILE B 143 O 113.1 114.5 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YNP RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT COFACTOR NADPH DBREF 1YNQ A 1 297 UNP Q9KE47 Q9KE47_BACHD 1 297 DBREF 1YNQ B 1 297 UNP Q9KE47 Q9KE47_BACHD 1 297 SEQADV 1YNQ MET A -20 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ GLY A -19 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER A -18 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER A -17 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS A -16 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS A -15 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS A -14 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS A -13 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS A -12 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS A -11 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER A -10 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER A -9 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ GLY A -8 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ LEU A -7 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ VAL A -6 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ PRO A -5 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ ARG A -4 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ GLY A -3 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER A -2 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS A -1 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ MET B -20 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ GLY B -19 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER B -18 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER B -17 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS B -16 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS B -15 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS B -14 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS B -13 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS B -12 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS B -11 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER B -10 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER B -9 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ GLY B -8 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ LEU B -7 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ VAL B -6 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ PRO B -5 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ ARG B -4 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ GLY B -3 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ SER B -2 UNP Q9KE47 CLONING ARTIFACT SEQADV 1YNQ HIS B -1 UNP Q9KE47 CLONING ARTIFACT SEQRES 1 A 317 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 317 LEU VAL PRO ARG GLY SER HIS MET LYS LYS ARG GLN LEU SEQRES 3 A 317 GLY THR SER ASP LEU HIS VAL SER GLU LEU GLY PHE GLY SEQRES 4 A 317 CYS MET SER LEU GLY THR ASP GLU THR LYS ALA ARG ARG SEQRES 5 A 317 ILE MET ASP GLU VAL LEU GLU LEU GLY ILE ASN TYR LEU SEQRES 6 A 317 ASP THR ALA ASP LEU TYR ASN GLN GLY LEU ASN GLU GLN SEQRES 7 A 317 PHE VAL GLY LYS ALA LEU LYS GLY ARG ARG GLN ASP ILE SEQRES 8 A 317 ILE LEU ALA THR LYS VAL GLY ASN ARG PHE GLU GLN GLY SEQRES 9 A 317 LYS GLU GLY TRP TRP TRP ASP PRO SER LYS ALA TYR ILE SEQRES 10 A 317 LYS GLU ALA VAL LYS ASP SER LEU ARG ARG LEU GLN THR SEQRES 11 A 317 ASP TYR ILE ASP LEU TYR GLN LEU HIS GLY GLY THR ILE SEQRES 12 A 317 ASP ASP PRO ILE ASP GLU THR ILE GLU ALA PHE GLU GLU SEQRES 13 A 317 LEU LYS GLN GLU GLY VAL ILE ARG TYR TYR GLY ILE SER SEQRES 14 A 317 SER ILE ARG PRO ASN VAL ILE LYS GLU TYR LEU LYS ARG SEQRES 15 A 317 SER ASN ILE VAL SER ILE MET MET GLN TYR SER ILE LEU SEQRES 16 A 317 ASP ARG ARG PRO GLU GLU TRP PHE PRO LEU ILE GLN GLU SEQRES 17 A 317 HIS GLY VAL SER VAL VAL VAL ARG GLY PRO VAL ALA ARG SEQRES 18 A 317 GLY LEU LEU SER ARG ARG PRO LEU PRO GLU GLY GLU GLY SEQRES 19 A 317 TYR LEU ASN TYR ARG TYR ASP GLU LEU LYS LEU LEU ARG SEQRES 20 A 317 GLU SER LEU PRO THR ASP ARG PRO LEU HIS GLU LEU ALA SEQRES 21 A 317 LEU GLN TYR CYS LEU ALA HIS ASP VAL VAL ALA THR VAL SEQRES 22 A 317 ALA ALA GLY ALA SER SER ILE ASP GLN VAL LYS ALA ASN SEQRES 23 A 317 VAL GLN ALA VAL GLU ALA THR PRO LEU THR ALA GLU GLU SEQRES 24 A 317 ARG GLN HIS ILE GLN LYS LEU ALA LYS ALA ALA VAL TYR SEQRES 25 A 317 GLU GLN HIS ARG GLU SEQRES 1 B 317 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 317 LEU VAL PRO ARG GLY SER HIS MET LYS LYS ARG GLN LEU SEQRES 3 B 317 GLY THR SER ASP LEU HIS VAL SER GLU LEU GLY PHE GLY SEQRES 4 B 317 CYS MET SER LEU GLY THR ASP GLU THR LYS ALA ARG ARG SEQRES 5 B 317 ILE MET ASP GLU VAL LEU GLU LEU GLY ILE ASN TYR LEU SEQRES 6 B 317 ASP THR ALA ASP LEU TYR ASN GLN GLY LEU ASN GLU GLN SEQRES 7 B 317 PHE VAL GLY LYS ALA LEU LYS GLY ARG ARG GLN ASP ILE SEQRES 8 B 317 ILE LEU ALA THR LYS VAL GLY ASN ARG PHE GLU GLN GLY SEQRES 9 B 317 LYS GLU GLY TRP TRP TRP ASP PRO SER LYS ALA TYR ILE SEQRES 10 B 317 LYS GLU ALA VAL LYS ASP SER LEU ARG ARG LEU GLN THR SEQRES 11 B 317 ASP TYR ILE ASP LEU TYR GLN LEU HIS GLY GLY THR ILE SEQRES 12 B 317 ASP ASP PRO ILE ASP GLU THR ILE GLU ALA PHE GLU GLU SEQRES 13 B 317 LEU LYS GLN GLU GLY VAL ILE ARG TYR TYR GLY ILE SER SEQRES 14 B 317 SER ILE ARG PRO ASN VAL ILE LYS GLU TYR LEU LYS ARG SEQRES 15 B 317 SER ASN ILE VAL SER ILE MET MET GLN TYR SER ILE LEU SEQRES 16 B 317 ASP ARG ARG PRO GLU GLU TRP PHE PRO LEU ILE GLN GLU SEQRES 17 B 317 HIS GLY VAL SER VAL VAL VAL ARG GLY PRO VAL ALA ARG SEQRES 18 B 317 GLY LEU LEU SER ARG ARG PRO LEU PRO GLU GLY GLU GLY SEQRES 19 B 317 TYR LEU ASN TYR ARG TYR ASP GLU LEU LYS LEU LEU ARG SEQRES 20 B 317 GLU SER LEU PRO THR ASP ARG PRO LEU HIS GLU LEU ALA SEQRES 21 B 317 LEU GLN TYR CYS LEU ALA HIS ASP VAL VAL ALA THR VAL SEQRES 22 B 317 ALA ALA GLY ALA SER SER ILE ASP GLN VAL LYS ALA ASN SEQRES 23 B 317 VAL GLN ALA VAL GLU ALA THR PRO LEU THR ALA GLU GLU SEQRES 24 B 317 ARG GLN HIS ILE GLN LYS LEU ALA LYS ALA ALA VAL TYR SEQRES 25 B 317 GLU GLN HIS ARG GLU HET GLC C 1 11 HET FRU C 2 12 HET NA A 299 1 HET SO4 A 300 5 HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 B 298 5 HET SO4 B 299 5 HET SO4 B 300 5 HET NDP B 301 48 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM FRU BETA-D-FRUCTOFURANOSE HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM GOL GLYCEROL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN FRU BETA-D-FRUCTOSE; D-FRUCTOSE; FRUCTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GLC C6 H12 O6 FORMUL 3 FRU C6 H12 O6 FORMUL 4 NA NA 1+ FORMUL 5 SO4 11(O4 S 2-) FORMUL 16 NDP C21 H30 N7 O17 P3 FORMUL 17 GOL 3(C3 H8 O3) FORMUL 20 HOH *683(H2 O) HELIX 1 1 ASP A 26 LEU A 40 1 15 HELIX 2 2 ASN A 56 LEU A 64 1 9 HELIX 3 3 ARG A 67 ILE A 71 5 5 HELIX 4 4 SER A 93 GLN A 109 1 17 HELIX 5 5 PRO A 126 GLU A 140 1 15 HELIX 6 6 ARG A 152 SER A 163 1 12 HELIX 7 7 ARG A 177 GLU A 181 5 5 HELIX 8 8 TRP A 182 HIS A 189 1 8 HELIX 9 9 VAL A 199 LEU A 203 5 5 HELIX 10 10 ARG A 219 LEU A 230 1 12 HELIX 11 11 PRO A 235 ALA A 246 1 12 HELIX 12 12 SER A 259 GLU A 271 1 13 HELIX 13 13 THR A 276 ALA A 287 1 12 HELIX 14 14 ASP B 26 LEU B 40 1 15 HELIX 15 15 LEU B 50 GLN B 53 5 4 HELIX 16 16 GLY B 54 LYS B 65 1 12 HELIX 17 17 SER B 93 GLN B 109 1 17 HELIX 18 18 PRO B 126 GLU B 140 1 15 HELIX 19 19 ARG B 152 SER B 163 1 12 HELIX 20 20 ARG B 177 GLU B 181 5 5 HELIX 21 21 TRP B 182 HIS B 189 1 8 HELIX 22 22 VAL B 199 LEU B 203 5 5 HELIX 23 23 ARG B 219 LEU B 230 1 12 HELIX 24 24 PRO B 235 ALA B 246 1 12 HELIX 25 25 SER B 259 ALA B 272 1 14 HELIX 26 26 THR B 276 ALA B 287 1 12 SHEET 1 A 2 LYS A 3 GLN A 5 0 SHEET 2 A 2 HIS A 12 SER A 14 -1 O VAL A 13 N ARG A 4 SHEET 1 B 7 TYR A 44 ASP A 46 0 SHEET 2 B 7 ILE A 72 VAL A 77 1 O ALA A 74 N LEU A 45 SHEET 3 B 7 ILE A 113 LEU A 118 1 O GLN A 117 N THR A 75 SHEET 4 B 7 ILE A 143 SER A 149 1 O SER A 149 N LEU A 118 SHEET 5 B 7 SER A 167 GLN A 171 1 O MET A 169 N ILE A 148 SHEET 6 B 7 SER A 192 ARG A 196 1 O ARG A 196 N MET A 170 SHEET 7 B 7 VAL A 250 ALA A 254 1 O ALA A 254 N VAL A 195 SHEET 1 C 2 LYS B 3 GLN B 5 0 SHEET 2 C 2 HIS B 12 SER B 14 -1 O VAL B 13 N ARG B 4 SHEET 1 D 8 PHE B 18 GLY B 19 0 SHEET 2 D 8 TYR B 44 ASP B 46 1 O ASP B 46 N PHE B 18 SHEET 3 D 8 ILE B 72 VAL B 77 1 O ALA B 74 N LEU B 45 SHEET 4 D 8 ILE B 113 LEU B 118 1 O GLN B 117 N VAL B 77 SHEET 5 D 8 ILE B 143 SER B 149 1 O SER B 149 N LEU B 118 SHEET 6 D 8 SER B 167 GLN B 171 1 O MET B 169 N ILE B 148 SHEET 7 D 8 SER B 192 ARG B 196 1 O ARG B 196 N MET B 170 SHEET 8 D 8 VAL B 250 VAL B 253 1 O THR B 252 N VAL B 195 SHEET 1 E 2 ASN B 79 ARG B 80 0 SHEET 2 E 2 TRP B 89 TRP B 90 -1 O TRP B 89 N ARG B 80 LINK C1 GLC C 1 O2 FRU C 2 1555 1555 1.42 LINK OE2 GLU A 181 NA NA A 299 1555 1555 2.64 LINK NA NA A 299 O HOH A 340 1555 1555 2.74 LINK NA NA A 299 O ILE B 143 1555 1555 2.79 CRYST1 75.122 87.543 105.434 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013300 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011400 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009500 0.00000