data_1YOD # _entry.id 1YOD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YOD RCSB RCSB031749 WWPDB D_1000031749 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YOD _pdbx_database_status.recvd_initial_deposition_date 2005-01-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Slovic, A.M.' 1 'Stayrook, S.E.' 2 'North, B.' 3 'DeGrado, W.F.' 4 # _citation.id primary _citation.title ;X-ray structure of a water-soluble analog of the membrane protein phospholamban: sequence determinants defining the topology of tetrameric and pentameric coiled coils. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 348 _citation.page_first 777 _citation.page_last 787 _citation.year 2005 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15826670 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2005.02.040 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Slovic, A.M.' 1 primary 'Stayrook, S.E.' 2 primary 'North, B.' 3 primary 'DeGrado, W.F.' 4 # _cell.entry_id 1YOD _cell.length_a 46.996 _cell.length_b 46.996 _cell.length_c 120.136 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YOD _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'water-solublized phospholamban' 3741.232 2 ? ? ? ? 2 water nat water 18.015 62 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'QQARQNLQNLYINRCLREICQELKEIRA(MSE)L' _entity_poly.pdbx_seq_one_letter_code_can QQARQNLQNLYINRCLREICQELKEIRAML _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 GLN n 1 3 ALA n 1 4 ARG n 1 5 GLN n 1 6 ASN n 1 7 LEU n 1 8 GLN n 1 9 ASN n 1 10 LEU n 1 11 TYR n 1 12 ILE n 1 13 ASN n 1 14 ARG n 1 15 CYS n 1 16 LEU n 1 17 ARG n 1 18 GLU n 1 19 ILE n 1 20 CYS n 1 21 GLN n 1 22 GLU n 1 23 LEU n 1 24 LYS n 1 25 GLU n 1 26 ILE n 1 27 ARG n 1 28 ALA n 1 29 MSE n 1 30 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'synthetic protein' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1YOD _struct_ref.pdbx_db_accession 1YOD _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YOD A 1 ? 30 ? 1YOD 22 ? 51 ? 22 51 2 1 1YOD B 1 ? 30 ? 1YOD 22 ? 51 ? 22 51 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # _exptl.entry_id 1YOD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_percent_sol 42.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '1,6 hexanediol, sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-03-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'super-bend magnet' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9765 1.0 2 0.9766 1.0 3 0.9643 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9765, 0.9766, 0.9643' # _reflns.entry_id 1YOD _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 30.0 _reflns.number_all 7887 _reflns.number_obs 7658 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.1 _reflns.B_iso_Wilson_estimate 25.5 _reflns.pdbx_redundancy 18 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.43 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 18 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 625 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1YOD _refine.ls_number_reflns_obs 7304 _refine.ls_number_reflns_all 7887 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.72 _refine.ls_R_factor_obs 0.21176 _refine.ls_R_factor_all 0.21176 _refine.ls_R_factor_R_work 0.20867 _refine.ls_R_factor_R_free 0.25724 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.9 _refine.ls_number_reflns_R_free 538 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.917 _refine.B_iso_mean 25.500 _refine.aniso_B[1][1] 0.46 _refine.aniso_B[2][2] 0.46 _refine.aniso_B[3][3] -0.70 _refine.aniso_B[1][2] 0.23 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.187 _refine.pdbx_overall_ESU_R_Free 0.130 _refine.overall_SU_ML 0.073 _refine.overall_SU_B 2.247 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 489 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 551 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.034 0.022 ? 489 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 471 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.663 1.984 ? 649 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.911 3.000 ? 1091 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.826 5.000 ? 55 'X-RAY DIFFRACTION' ? r_chiral_restr 0.084 0.200 ? 73 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 529 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 95 'X-RAY DIFFRACTION' ? r_nbd_refined 0.263 0.200 ? 142 'X-RAY DIFFRACTION' ? r_nbd_other 0.255 0.200 ? 554 'X-RAY DIFFRACTION' ? r_nbtor_other 0.089 0.200 ? 323 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.255 0.200 ? 39 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.203 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.272 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.309 0.200 ? 6 'X-RAY DIFFRACTION' ? r_mcbond_it 1.536 1.500 ? 285 'X-RAY DIFFRACTION' ? r_mcangle_it 2.708 2.000 ? 455 'X-RAY DIFFRACTION' ? r_scbond_it 4.341 3.000 ? 204 'X-RAY DIFFRACTION' ? r_scangle_it 7.490 4.500 ? 194 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.504 2.000 ? 489 'X-RAY DIFFRACTION' ? r_sphericity_free 4.101 2.000 ? 62 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2.783 2.000 ? 489 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 510 _refine_ls_shell.R_factor_R_work 0.223 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.286 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1YOD _struct.title 'Crystal structure of a water soluble analog of phospholamban' _struct.pdbx_descriptor 'water-solublized phospholamban' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YOD _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'protein design, water-soluble, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 1 ? LEU A 30 ? GLN A 22 LEU A 51 1 ? 30 HELX_P HELX_P2 2 ARG B 4 ? LEU B 30 ? ARG B 25 LEU B 51 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 28 C ? ? ? 1_555 A MSE 29 N ? ? A ALA 49 A MSE 50 1_555 ? ? ? ? ? ? ? 1.321 ? covale2 covale ? ? A MSE 29 C ? ? ? 1_555 A LEU 30 N ? ? A MSE 50 A LEU 51 1_555 ? ? ? ? ? ? ? 1.334 ? covale3 covale ? ? B ALA 28 C ? ? ? 1_555 B MSE 29 N ? ? B ALA 49 B MSE 50 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? B MSE 29 C ? ? ? 1_555 B LEU 30 N ? ? B MSE 50 B LEU 51 1_555 ? ? ? ? ? ? ? 1.337 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1YOD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YOD _atom_sites.fract_transf_matrix[1][1] 0.021278 _atom_sites.fract_transf_matrix[1][2] 0.012285 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024570 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008324 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 22 22 GLN GLN A . n A 1 2 GLN 2 23 23 GLN GLN A . n A 1 3 ALA 3 24 24 ALA ALA A . n A 1 4 ARG 4 25 25 ARG ARG A . n A 1 5 GLN 5 26 26 GLN GLN A . n A 1 6 ASN 6 27 27 ASN ASN A . n A 1 7 LEU 7 28 28 LEU LEU A . n A 1 8 GLN 8 29 29 GLN GLN A . n A 1 9 ASN 9 30 30 ASN ASN A . n A 1 10 LEU 10 31 31 LEU LEU A . n A 1 11 TYR 11 32 32 TYR TYR A . n A 1 12 ILE 12 33 33 ILE ILE A . n A 1 13 ASN 13 34 34 ASN ASN A . n A 1 14 ARG 14 35 35 ARG ARG A . n A 1 15 CYS 15 36 36 CYS CYS A . n A 1 16 LEU 16 37 37 LEU LEU A . n A 1 17 ARG 17 38 38 ARG ARG A . n A 1 18 GLU 18 39 39 GLU GLU A . n A 1 19 ILE 19 40 40 ILE ILE A . n A 1 20 CYS 20 41 41 CYS CYS A . n A 1 21 GLN 21 42 42 GLN GLN A . n A 1 22 GLU 22 43 43 GLU GLU A . n A 1 23 LEU 23 44 44 LEU LEU A . n A 1 24 LYS 24 45 45 LYS LYS A . n A 1 25 GLU 25 46 46 GLU GLU A . n A 1 26 ILE 26 47 47 ILE ILE A . n A 1 27 ARG 27 48 48 ARG ARG A . n A 1 28 ALA 28 49 49 ALA ALA A . n A 1 29 MSE 29 50 50 MSE MSE A . n A 1 30 LEU 30 51 51 LEU LEU A . n B 1 1 GLN 1 22 ? ? ? B . n B 1 2 GLN 2 23 ? ? ? B . n B 1 3 ALA 3 24 ? ? ? B . n B 1 4 ARG 4 25 25 ARG ARG B . n B 1 5 GLN 5 26 26 GLN GLN B . n B 1 6 ASN 6 27 27 ASN ASN B . n B 1 7 LEU 7 28 28 LEU LEU B . n B 1 8 GLN 8 29 29 GLN GLN B . n B 1 9 ASN 9 30 30 ASN ASN B . n B 1 10 LEU 10 31 31 LEU LEU B . n B 1 11 TYR 11 32 32 TYR TYR B . n B 1 12 ILE 12 33 33 ILE ILE B . n B 1 13 ASN 13 34 34 ASN ASN B . n B 1 14 ARG 14 35 35 ARG ARG B . n B 1 15 CYS 15 36 36 CYS CYS B . n B 1 16 LEU 16 37 37 LEU LEU B . n B 1 17 ARG 17 38 38 ARG ARG B . n B 1 18 GLU 18 39 39 GLU GLU B . n B 1 19 ILE 19 40 40 ILE ILE B . n B 1 20 CYS 20 41 41 CYS CYS B . n B 1 21 GLN 21 42 42 GLN GLN B . n B 1 22 GLU 22 43 43 GLU GLU B . n B 1 23 LEU 23 44 44 LEU LEU B . n B 1 24 LYS 24 45 45 LYS LYS B . n B 1 25 GLU 25 46 46 GLU GLU B . n B 1 26 ILE 26 47 47 ILE ILE B . n B 1 27 ARG 27 48 48 ARG ARG B . n B 1 28 ALA 28 49 49 ALA ALA B . n B 1 29 MSE 29 50 50 MSE MSE B . n B 1 30 LEU 30 51 51 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 52 1 HOH HOH A . C 2 HOH 2 53 2 HOH HOH A . C 2 HOH 3 54 4 HOH HOH A . C 2 HOH 4 55 5 HOH HOH A . C 2 HOH 5 56 6 HOH HOH A . C 2 HOH 6 57 8 HOH HOH A . C 2 HOH 7 58 9 HOH HOH A . C 2 HOH 8 59 11 HOH HOH A . C 2 HOH 9 60 12 HOH HOH A . C 2 HOH 10 61 13 HOH HOH A . C 2 HOH 11 62 14 HOH HOH A . C 2 HOH 12 63 15 HOH HOH A . C 2 HOH 13 64 16 HOH HOH A . C 2 HOH 14 65 20 HOH HOH A . C 2 HOH 15 66 22 HOH HOH A . C 2 HOH 16 67 24 HOH HOH A . C 2 HOH 17 68 25 HOH HOH A . C 2 HOH 18 69 27 HOH HOH A . C 2 HOH 19 70 31 HOH HOH A . C 2 HOH 20 71 35 HOH HOH A . C 2 HOH 21 72 36 HOH HOH A . C 2 HOH 22 73 40 HOH HOH A . C 2 HOH 23 74 41 HOH HOH A . C 2 HOH 24 75 42 HOH HOH A . C 2 HOH 25 76 43 HOH HOH A . C 2 HOH 26 77 44 HOH HOH A . C 2 HOH 27 78 45 HOH HOH A . C 2 HOH 28 79 51 HOH HOH A . C 2 HOH 29 80 52 HOH HOH A . C 2 HOH 30 81 53 HOH HOH A . C 2 HOH 31 82 56 HOH HOH A . C 2 HOH 32 83 57 HOH HOH A . C 2 HOH 33 84 58 HOH HOH A . C 2 HOH 34 85 59 HOH HOH A . C 2 HOH 35 86 60 HOH HOH A . D 2 HOH 1 52 3 HOH HOH B . D 2 HOH 2 53 7 HOH HOH B . D 2 HOH 3 54 10 HOH HOH B . D 2 HOH 4 55 17 HOH HOH B . D 2 HOH 5 56 18 HOH HOH B . D 2 HOH 6 57 19 HOH HOH B . D 2 HOH 7 58 21 HOH HOH B . D 2 HOH 8 59 23 HOH HOH B . D 2 HOH 9 60 26 HOH HOH B . D 2 HOH 10 61 28 HOH HOH B . D 2 HOH 11 62 29 HOH HOH B . D 2 HOH 12 63 30 HOH HOH B . D 2 HOH 13 64 32 HOH HOH B . D 2 HOH 14 65 33 HOH HOH B . D 2 HOH 15 66 34 HOH HOH B . D 2 HOH 16 67 37 HOH HOH B . D 2 HOH 17 68 38 HOH HOH B . D 2 HOH 18 69 39 HOH HOH B . D 2 HOH 19 70 46 HOH HOH B . D 2 HOH 20 71 47 HOH HOH B . D 2 HOH 21 72 48 HOH HOH B . D 2 HOH 22 73 49 HOH HOH B . D 2 HOH 23 74 50 HOH HOH B . D 2 HOH 24 75 54 HOH HOH B . D 2 HOH 25 76 55 HOH HOH B . D 2 HOH 26 77 61 HOH HOH B . D 2 HOH 27 78 62 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 29 A MSE 50 ? MET SELENOMETHIONINE 2 B MSE 29 B MSE 50 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4750 ? 1 MORE -43 ? 1 'SSA (A^2)' 8210 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+11/6 0.5000000000 -0.8660254038 0.0000000000 23.4980000000 -0.8660254038 -0.5000000000 0.0000000000 40.6997298763 0.0000000000 0.0000000000 -1.0000000000 220.2493333333 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE At the time of processing no suitable sequence database reference was found ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 23 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 73 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 72 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 72 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 9_556 _pdbx_validate_symm_contact.dist 2.06 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A MSE 50 ? ? CG A MSE 50 ? ? 1.721 1.520 0.201 0.030 N 2 1 SE A MSE 50 ? ? CE A MSE 50 ? ? 1.259 1.950 -0.691 0.059 N 3 1 SE B MSE 50 ? ? CE B MSE 50 ? ? 1.474 1.950 -0.476 0.059 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLN 22 ? B GLN 1 2 1 Y 1 B GLN 23 ? B GLN 2 3 1 Y 1 B ALA 24 ? B ALA 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #