HEADER DNA BINDING PROTEIN 01-FEB-05 1YQA TITLE ENGINEERING THE STRUCTURAL STABILITY AND FUNCTIONAL PROPERTIES OF THE TITLE 2 GI DOMAIN INTO THE INTRINSICALLY UNFOLDED GII DOMAIN OF THE YEAST TITLE 3 LINKER HISTONE HHO1P COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GII LOOP MUTANT (GII-L), RESIDUES 171-258; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: HHO1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS WINGED-HELIX, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR A.SANDERSON,K.STOTT,T.J.STEVENS,J.O.THOMAS REVDAT 3 20-OCT-21 1YQA 1 REMARK SEQADV REVDAT 2 24-FEB-09 1YQA 1 VERSN REVDAT 1 24-MAY-05 1YQA 0 JRNL AUTH A.SANDERSON,K.STOTT,T.J.STEVENS,J.O.THOMAS JRNL TITL ENGINEERING THE STRUCTURAL STABILITY AND FUNCTIONAL JRNL TITL 2 PROPERTIES OF THE GI DOMAIN INTO THE INTRINSICALLY UNFOLDED JRNL TITL 3 GII DOMAIN OF THE YEAST LINKER HISTONE HHO1P. JRNL REF J.MOL.BIOL. V. 349 608 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15878177 JRNL DOI 10.1016/J.JMB.2005.03.085 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.ALI,P.COLES,T.J.STEVENS,K.STOTT,J.O.THOMAS REMARK 1 TITL TWO HOMOLOGOUS DOMAINS OF SIMILAR STRUCTURE BUT DIFFERENT REMARK 1 TITL 2 STABILITY IN THE YEAST LINKER HISTONE, HHO1P REMARK 1 REF J.MOL.BIOL. V. 338 139 2004 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 15050829 REMARK 1 DOI 10.1016/J.JMB.2004.02.046 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR, CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YQA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031804. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM PHOSPHATE REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1MM GII-L U-15N,13C; 100MM REMARK 210 PHOSPHATE BUFFER; 1MM EDTA; 1- REMARK 210 2MM DTT REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AZARA 2.7, ANALYSIS 1.0, ARIA REMARK 210 1.1.2, CNS 1.1 REMARK 210 METHOD USED : SEE JOURNAL CITATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 175 -144.76 -75.04 REMARK 500 1 ASN A 249 -70.32 -74.12 REMARK 500 1 LYS A 252 31.19 -79.77 REMARK 500 1 VAL A 253 106.73 -164.69 REMARK 500 1 LYS A 254 32.58 -164.12 REMARK 500 2 PRO A 175 33.38 -74.94 REMARK 500 2 SER A 176 -64.95 68.45 REMARK 500 2 ASN A 218 39.61 -92.65 REMARK 500 2 LYS A 251 -44.27 -175.19 REMARK 500 2 LYS A 254 76.43 64.46 REMARK 500 2 SER A 256 -117.55 -169.29 REMARK 500 3 PRO A 175 -140.82 -77.60 REMARK 500 3 ASN A 192 -59.25 68.71 REMARK 500 3 ASP A 193 -36.64 175.86 REMARK 500 3 SER A 215 -48.74 -171.33 REMARK 500 3 SER A 243 -123.01 -143.16 REMARK 500 3 LYS A 251 -48.79 68.20 REMARK 500 3 SER A 256 47.05 -160.72 REMARK 500 4 ALA A 172 91.29 -69.12 REMARK 500 4 SER A 173 -56.40 -156.84 REMARK 500 4 PRO A 175 -134.94 -75.19 REMARK 500 4 SER A 176 -47.94 -152.69 REMARK 500 4 ASN A 218 38.52 -90.07 REMARK 500 4 SER A 256 -48.48 -147.00 REMARK 500 5 SER A 215 48.26 -95.45 REMARK 500 5 LYS A 250 36.50 -76.61 REMARK 500 5 LEU A 255 -131.35 -80.57 REMARK 500 6 ALA A 172 43.01 -81.97 REMARK 500 6 PRO A 175 -136.35 -72.17 REMARK 500 6 SER A 176 -46.89 -155.35 REMARK 500 6 ASN A 218 36.78 -95.01 REMARK 500 7 PRO A 175 -143.04 -70.25 REMARK 500 7 SER A 215 51.89 -160.23 REMARK 500 7 ILE A 245 114.87 -160.74 REMARK 500 7 LYS A 254 145.01 71.21 REMARK 500 8 PRO A 175 -148.80 -71.01 REMARK 500 8 ASN A 218 35.58 -87.04 REMARK 500 8 SER A 256 133.69 -172.45 REMARK 500 9 PRO A 175 -144.25 -75.84 REMARK 500 9 SER A 176 -39.96 -140.28 REMARK 500 9 LYS A 250 53.64 -167.09 REMARK 500 10 ALA A 172 -139.20 -94.92 REMARK 500 10 PRO A 175 -140.48 -69.34 REMARK 500 10 SER A 215 33.95 -97.82 REMARK 500 10 ASN A 218 48.67 -92.99 REMARK 500 10 SER A 243 42.67 -84.18 REMARK 500 10 ASN A 249 86.82 -69.55 REMARK 500 10 LYS A 250 42.01 -87.70 REMARK 500 10 LYS A 254 146.85 64.56 REMARK 500 10 LEU A 255 -143.66 -78.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UST RELATED DB: PDB REMARK 900 YEAST HISTONE H1 GLOBULAR DOMAIN I, HHO1P GI REMARK 900 RELATED ID: 1USS RELATED DB: PDB REMARK 900 YEAST HISTONE H1 GLOBULAR DOMAIN II, HHO1P GII DBREF 1YQA A 171 257 UNP P53551 H1_YEAST 171 258 SEQADV 1YQA TYR A 210 UNP P53551 PHE 210 ENGINEERED MUTATION SEQADV 1YQA PRO A 211 UNP P53551 SER 211 ENGINEERED MUTATION SEQADV 1YQA ILE A 212 UNP P53551 SER 212 ENGINEERED MUTATION SEQADV 1YQA VAL A 213 UNP P53551 LYS 213 ENGINEERED MUTATION SEQADV 1YQA GLY A 214 UNP P53551 LEU 214 ENGINEERED MUTATION SEQADV 1YQA SER A 215 UNP P53551 LYS 215 ENGINEERED MUTATION SEQADV 1YQA ALA A 216 UNP P53551 THR 216 ENGINEERED MUTATION SEQADV 1YQA A UNP P53551 SER 217 DELETION SEQRES 1 A 87 LYS ALA SER SER PRO SER SER LEU THR TYR LYS GLU MET SEQRES 2 A 87 ILE LEU LYS SER MET PRO GLN LEU ASN ASP GLY LYS GLY SEQRES 3 A 87 SER SER ARG ILE VAL LEU LYS LYS TYR VAL LYS ASP THR SEQRES 4 A 87 TYR PRO ILE VAL GLY SER ALA SER ASN PHE ASP TYR LEU SEQRES 5 A 87 PHE ASN SER ALA ILE LYS LYS CYS VAL GLU ASN GLY GLU SEQRES 6 A 87 LEU VAL GLN PRO LYS GLY PRO SER GLY ILE ILE LYS LEU SEQRES 7 A 87 ASN LYS LYS LYS VAL LYS LEU SER THR HELIX 1 1 THR A 179 MET A 188 1 10 HELIX 2 2 GLN A 190 LYS A 195 5 6 HELIX 3 3 SER A 198 TYR A 210 1 13 HELIX 4 4 TYR A 210 ALA A 216 1 7 HELIX 5 5 ASN A 218 GLY A 234 1 17 SHEET 1 A 2 LEU A 236 VAL A 237 0 SHEET 2 A 2 LYS A 247 LEU A 248 -1 O LYS A 247 N VAL A 237 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1