HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-FEB-05 1YRE TITLE HYPOTHETICAL PROTEIN PA3270 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX TITLE 2 WITH COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PA3270; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET15B KEYWDS APC5563, PA3270, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MSCG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI, MCSG, STRUCTURAL GENOMICS, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR V.V.LUNIN,J.OSIPIUK,A.SAVCHENKO,A.M.EDWARDS,A.JOACHIMIAK,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 8 14-FEB-24 1YRE 1 REMARK SEQADV REVDAT 7 11-OCT-17 1YRE 1 REMARK REVDAT 6 13-JUL-11 1YRE 1 VERSN REVDAT 5 24-FEB-09 1YRE 1 VERSN REVDAT 4 14-AUG-07 1YRE 1 AUTHOR REVDAT 3 24-JAN-06 1YRE 1 AUTHOR REVDAT 2 28-JUN-05 1YRE 1 AUTHOR REVDAT 1 15-FEB-05 1YRE 0 JRNL AUTH V.V.LUNIN,T.SKARINA,J.OSIPIUK,A.JOACHIMIAK,A.M.EDWARDS, JRNL AUTH 2 A.SAVCHENKO JRNL TITL THE CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN PA3270 FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA IN COMPLEX WITH COA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 38538 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2083 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2680 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 144 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5848 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 192 REMARK 3 SOLVENT ATOMS : 428 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.00000 REMARK 3 B22 (A**2) : -1.03000 REMARK 3 B33 (A**2) : -0.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.318 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.239 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.778 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6177 ; 0.020 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8403 ; 1.894 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 737 ; 7.325 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 290 ;35.918 ;22.621 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1017 ;17.317 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 72 ;23.707 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 909 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4654 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2782 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4039 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 450 ; 0.201 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 73 ; 0.225 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.241 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3837 ; 1.623 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5878 ; 1.782 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2705 ; 3.297 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2525 ; 5.032 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YRE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97906 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43452 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.57600 REMARK 200 FOR SHELL : 2.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 0.1M TRISHCL, 25%PEG3350, REMARK 280 1MM ACCOA, PH 6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.79500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.66550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.02650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.66550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.79500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.02650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER. THE ASYMMETRIC UNIT REMARK 300 CONTAINS TWO DIMERS (CHAINS A.B) AND (CHAINS C,D) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 6 REMARK 465 MET A 7 REMARK 465 PHE A 8 REMARK 465 LYS A 9 REMARK 465 PRO A 10 REMARK 465 THR A 194 REMARK 465 GLY A 195 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 4 REMARK 465 ALA B 5 REMARK 465 PRO B 6 REMARK 465 MET B 7 REMARK 465 GLY B 195 REMARK 465 GLY C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ARG C 3 REMARK 465 ARG C 4 REMARK 465 ALA C 5 REMARK 465 PRO C 6 REMARK 465 MET C 7 REMARK 465 PHE C 8 REMARK 465 LYS C 9 REMARK 465 PRO C 10 REMARK 465 LEU C 11 REMARK 465 THR C 194 REMARK 465 GLY C 195 REMARK 465 GLY D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ARG D 3 REMARK 465 ARG D 4 REMARK 465 ALA D 5 REMARK 465 PRO D 6 REMARK 465 MET D 7 REMARK 465 GLY D 195 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 604 O HOH B 711 1.91 REMARK 500 NH2 ARG A 21 O GLY A 76 2.00 REMARK 500 NE2 GLN C 78 O HOH C 715 2.07 REMARK 500 NH1 ARG B 113 OG SER B 192 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN C 153 CB GLN C 153 CG 0.175 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU D 150 CB - CG - CD1 ANGL. DEV. = -10.7 DEGREES REMARK 500 ASP D 179 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 92 -60.56 -91.17 REMARK 500 ARG A 128 19.94 80.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA C 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA D 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5563 RELATED DB: TARGETDB DBREF 1YRE A 1 195 GB 9949395 AAG06658 1 195 DBREF 1YRE B 1 195 GB 9949395 AAG06658 1 195 DBREF 1YRE C 1 195 GB 9949395 AAG06658 1 195 DBREF 1YRE D 1 195 GB 9949395 AAG06658 1 195 SEQADV 1YRE GLY A -1 GB 9949395 CLONING ARTIFACT SEQADV 1YRE HIS A 0 GB 9949395 CLONING ARTIFACT SEQADV 1YRE GLY B -1 GB 9949395 CLONING ARTIFACT SEQADV 1YRE HIS B 0 GB 9949395 CLONING ARTIFACT SEQADV 1YRE GLY C -1 GB 9949395 CLONING ARTIFACT SEQADV 1YRE HIS C 0 GB 9949395 CLONING ARTIFACT SEQADV 1YRE GLY D -1 GB 9949395 CLONING ARTIFACT SEQADV 1YRE HIS D 0 GB 9949395 CLONING ARTIFACT SEQRES 1 A 197 GLY HIS MET SER ARG ARG ALA PRO MET PHE LYS PRO LEU SEQRES 2 A 197 PRO ILE THR LEU GLN ARG GLY ALA LEU ARG LEU GLU PRO SEQRES 3 A 197 LEU VAL GLU ALA ASP ILE PRO GLU LEU VAL SER LEU ALA SEQRES 4 A 197 GLU ALA ASN ARG GLU ALA LEU GLN TYR MET ASP GLY PRO SEQRES 5 A 197 THR ARG PRO ASP TRP TYR ARG GLN SER LEU ALA GLU GLN SEQRES 6 A 197 ARG GLU GLY ARG ALA LEU PRO LEU ALA VAL ARG LEU GLY SEQRES 7 A 197 VAL GLN LEU VAL GLY THR THR ARG PHE ALA GLU PHE LEU SEQRES 8 A 197 PRO ALA LEU PRO ALA CYS GLU ILE GLY TRP THR TRP LEU SEQRES 9 A 197 ASP GLN ALA GLN HIS GLY SER GLY LEU ASN ARG MET ILE SEQRES 10 A 197 LYS TYR LEU MET LEU LYS HIS ALA PHE ASP ASN LEU ARG SEQRES 11 A 197 MET VAL ARG VAL GLN LEU SER THR ALA ALA SER ASN LEU SEQRES 12 A 197 ARG ALA GLN GLY ALA ILE ASP LYS LEU GLY ALA GLN ARG SEQRES 13 A 197 GLU GLY VAL LEU ARG ASN HIS ARG ARG LEU ALA GLY GLY SEQRES 14 A 197 ARG LEU ASP ASP THR PHE VAL TYR SER ILE THR ASP HIS SEQRES 15 A 197 GLU TRP PRO GLN VAL LYS ALA ALA LEU GLU ALA SER PHE SEQRES 16 A 197 THR GLY SEQRES 1 B 197 GLY HIS MET SER ARG ARG ALA PRO MET PHE LYS PRO LEU SEQRES 2 B 197 PRO ILE THR LEU GLN ARG GLY ALA LEU ARG LEU GLU PRO SEQRES 3 B 197 LEU VAL GLU ALA ASP ILE PRO GLU LEU VAL SER LEU ALA SEQRES 4 B 197 GLU ALA ASN ARG GLU ALA LEU GLN TYR MET ASP GLY PRO SEQRES 5 B 197 THR ARG PRO ASP TRP TYR ARG GLN SER LEU ALA GLU GLN SEQRES 6 B 197 ARG GLU GLY ARG ALA LEU PRO LEU ALA VAL ARG LEU GLY SEQRES 7 B 197 VAL GLN LEU VAL GLY THR THR ARG PHE ALA GLU PHE LEU SEQRES 8 B 197 PRO ALA LEU PRO ALA CYS GLU ILE GLY TRP THR TRP LEU SEQRES 9 B 197 ASP GLN ALA GLN HIS GLY SER GLY LEU ASN ARG MET ILE SEQRES 10 B 197 LYS TYR LEU MET LEU LYS HIS ALA PHE ASP ASN LEU ARG SEQRES 11 B 197 MET VAL ARG VAL GLN LEU SER THR ALA ALA SER ASN LEU SEQRES 12 B 197 ARG ALA GLN GLY ALA ILE ASP LYS LEU GLY ALA GLN ARG SEQRES 13 B 197 GLU GLY VAL LEU ARG ASN HIS ARG ARG LEU ALA GLY GLY SEQRES 14 B 197 ARG LEU ASP ASP THR PHE VAL TYR SER ILE THR ASP HIS SEQRES 15 B 197 GLU TRP PRO GLN VAL LYS ALA ALA LEU GLU ALA SER PHE SEQRES 16 B 197 THR GLY SEQRES 1 C 197 GLY HIS MET SER ARG ARG ALA PRO MET PHE LYS PRO LEU SEQRES 2 C 197 PRO ILE THR LEU GLN ARG GLY ALA LEU ARG LEU GLU PRO SEQRES 3 C 197 LEU VAL GLU ALA ASP ILE PRO GLU LEU VAL SER LEU ALA SEQRES 4 C 197 GLU ALA ASN ARG GLU ALA LEU GLN TYR MET ASP GLY PRO SEQRES 5 C 197 THR ARG PRO ASP TRP TYR ARG GLN SER LEU ALA GLU GLN SEQRES 6 C 197 ARG GLU GLY ARG ALA LEU PRO LEU ALA VAL ARG LEU GLY SEQRES 7 C 197 VAL GLN LEU VAL GLY THR THR ARG PHE ALA GLU PHE LEU SEQRES 8 C 197 PRO ALA LEU PRO ALA CYS GLU ILE GLY TRP THR TRP LEU SEQRES 9 C 197 ASP GLN ALA GLN HIS GLY SER GLY LEU ASN ARG MET ILE SEQRES 10 C 197 LYS TYR LEU MET LEU LYS HIS ALA PHE ASP ASN LEU ARG SEQRES 11 C 197 MET VAL ARG VAL GLN LEU SER THR ALA ALA SER ASN LEU SEQRES 12 C 197 ARG ALA GLN GLY ALA ILE ASP LYS LEU GLY ALA GLN ARG SEQRES 13 C 197 GLU GLY VAL LEU ARG ASN HIS ARG ARG LEU ALA GLY GLY SEQRES 14 C 197 ARG LEU ASP ASP THR PHE VAL TYR SER ILE THR ASP HIS SEQRES 15 C 197 GLU TRP PRO GLN VAL LYS ALA ALA LEU GLU ALA SER PHE SEQRES 16 C 197 THR GLY SEQRES 1 D 197 GLY HIS MET SER ARG ARG ALA PRO MET PHE LYS PRO LEU SEQRES 2 D 197 PRO ILE THR LEU GLN ARG GLY ALA LEU ARG LEU GLU PRO SEQRES 3 D 197 LEU VAL GLU ALA ASP ILE PRO GLU LEU VAL SER LEU ALA SEQRES 4 D 197 GLU ALA ASN ARG GLU ALA LEU GLN TYR MET ASP GLY PRO SEQRES 5 D 197 THR ARG PRO ASP TRP TYR ARG GLN SER LEU ALA GLU GLN SEQRES 6 D 197 ARG GLU GLY ARG ALA LEU PRO LEU ALA VAL ARG LEU GLY SEQRES 7 D 197 VAL GLN LEU VAL GLY THR THR ARG PHE ALA GLU PHE LEU SEQRES 8 D 197 PRO ALA LEU PRO ALA CYS GLU ILE GLY TRP THR TRP LEU SEQRES 9 D 197 ASP GLN ALA GLN HIS GLY SER GLY LEU ASN ARG MET ILE SEQRES 10 D 197 LYS TYR LEU MET LEU LYS HIS ALA PHE ASP ASN LEU ARG SEQRES 11 D 197 MET VAL ARG VAL GLN LEU SER THR ALA ALA SER ASN LEU SEQRES 12 D 197 ARG ALA GLN GLY ALA ILE ASP LYS LEU GLY ALA GLN ARG SEQRES 13 D 197 GLU GLY VAL LEU ARG ASN HIS ARG ARG LEU ALA GLY GLY SEQRES 14 D 197 ARG LEU ASP ASP THR PHE VAL TYR SER ILE THR ASP HIS SEQRES 15 D 197 GLU TRP PRO GLN VAL LYS ALA ALA LEU GLU ALA SER PHE SEQRES 16 D 197 THR GLY HET COA A 601 48 HET COA B 602 48 HET COA C 603 48 HET COA D 604 48 HETNAM COA COENZYME A FORMUL 5 COA 4(C21 H36 N7 O16 P3 S) FORMUL 9 HOH *428(H2 O) HELIX 1 1 VAL A 26 ALA A 28 5 3 HELIX 2 2 ASP A 29 ALA A 39 1 11 HELIX 3 3 ARG A 52 GLU A 65 1 14 HELIX 4 4 GLN A 104 HIS A 107 5 4 HELIX 5 5 GLY A 110 ASN A 126 1 17 HELIX 6 6 ASN A 140 LEU A 150 1 11 HELIX 7 7 GLU A 181 SER A 192 1 12 HELIX 8 8 VAL B 26 ALA B 28 5 3 HELIX 9 9 ASP B 29 ASN B 40 1 12 HELIX 10 10 ARG B 52 GLU B 65 1 14 HELIX 11 11 GLN B 104 HIS B 107 5 4 HELIX 12 12 GLY B 110 ASN B 126 1 17 HELIX 13 13 ASN B 140 GLY B 151 1 12 HELIX 14 14 GLU B 181 THR B 194 1 14 HELIX 15 15 VAL C 26 ALA C 28 5 3 HELIX 16 16 ASP C 29 ASN C 40 1 12 HELIX 17 17 ARG C 52 GLU C 65 1 14 HELIX 18 18 GLN C 104 HIS C 107 5 4 HELIX 19 19 GLY C 110 ASP C 125 1 16 HELIX 20 20 ASN C 140 LEU C 150 1 11 HELIX 21 21 GLU C 181 ALA C 191 1 11 HELIX 22 22 VAL D 26 ALA D 28 5 3 HELIX 23 23 ASP D 29 ASN D 40 1 12 HELIX 24 24 ARG D 41 GLN D 45 5 5 HELIX 25 25 ARG D 52 GLU D 65 1 14 HELIX 26 26 GLN D 104 HIS D 107 5 4 HELIX 27 27 GLY D 110 ASN D 126 1 17 HELIX 28 28 ASN D 140 GLY D 151 1 12 HELIX 29 29 GLU D 181 THR D 194 1 14 SHEET 1 A 8 LEU A 15 ARG A 17 0 SHEET 2 A 8 LEU A 20 PRO A 24 -1 O LEU A 22 N LEU A 15 SHEET 3 A 8 ALA A 68 LEU A 75 -1 O ARG A 74 N ARG A 21 SHEET 4 A 8 GLN A 78 LEU A 89 -1 O PHE A 85 N LEU A 69 SHEET 5 A 8 ALA A 94 LEU A 102 -1 O GLU A 96 N ALA A 86 SHEET 6 A 8 ARG A 131 ALA A 137 1 O GLN A 133 N ILE A 97 SHEET 7 A 8 LEU A 169 THR A 178 -1 O PHE A 173 N THR A 136 SHEET 8 A 8 GLN A 153 ARG A 163 -1 N GLU A 155 O VAL A 174 SHEET 1 B 8 LEU B 15 ARG B 17 0 SHEET 2 B 8 LEU B 20 PRO B 24 -1 O LEU B 22 N LEU B 15 SHEET 3 B 8 ALA B 68 LEU B 75 -1 O ARG B 74 N ARG B 21 SHEET 4 B 8 GLN B 78 LEU B 89 -1 O PHE B 85 N LEU B 69 SHEET 5 B 8 ALA B 94 LEU B 102 -1 O GLU B 96 N ALA B 86 SHEET 6 B 8 ARG B 131 ALA B 137 1 O GLN B 133 N CYS B 95 SHEET 7 B 8 LEU B 169 THR B 178 -1 O TYR B 175 N LEU B 134 SHEET 8 B 8 GLN B 153 ARG B 163 -1 N GLU B 155 O VAL B 174 SHEET 1 C 8 LEU C 15 ARG C 17 0 SHEET 2 C 8 LEU C 20 PRO C 24 -1 O LEU C 22 N LEU C 15 SHEET 3 C 8 ALA C 68 LEU C 75 -1 O ALA C 72 N GLU C 23 SHEET 4 C 8 GLN C 78 LEU C 89 -1 O PHE C 85 N LEU C 69 SHEET 5 C 8 ALA C 94 LEU C 102 -1 O GLU C 96 N ALA C 86 SHEET 6 C 8 ARG C 131 ALA C 137 1 O GLN C 133 N CYS C 95 SHEET 7 C 8 LEU C 169 THR C 178 -1 O PHE C 173 N THR C 136 SHEET 8 C 8 GLN C 153 ARG C 163 -1 N GLU C 155 O VAL C 174 SHEET 1 D 8 LEU D 15 ARG D 17 0 SHEET 2 D 8 LEU D 20 PRO D 24 -1 O LEU D 22 N LEU D 15 SHEET 3 D 8 ALA D 68 LEU D 75 -1 O ALA D 72 N GLU D 23 SHEET 4 D 8 GLN D 78 LEU D 89 -1 O THR D 83 N LEU D 71 SHEET 5 D 8 ALA D 94 LEU D 102 -1 O GLU D 96 N ALA D 86 SHEET 6 D 8 ARG D 131 ALA D 137 1 O GLN D 133 N CYS D 95 SHEET 7 D 8 LEU D 169 THR D 178 -1 O TYR D 175 N LEU D 134 SHEET 8 D 8 GLN D 153 ARG D 163 -1 N GLU D 155 O VAL D 174 CISPEP 1 LEU A 92 PRO A 93 0 -10.21 CISPEP 2 LEU B 92 PRO B 93 0 -5.22 CISPEP 3 LEU C 92 PRO C 93 0 -7.36 CISPEP 4 LEU D 92 PRO D 93 0 -4.10 SITE 1 AC1 19 ALA A 43 MET A 47 THR A 100 TRP A 101 SITE 2 AC1 19 LEU A 102 HIS A 107 GLY A 108 ASN A 112 SITE 3 AC1 19 ASN A 140 LEU A 141 ARG A 142 GLY A 145 SITE 4 AC1 19 ALA A 146 LYS A 149 HOH A 628 HOH A 639 SITE 5 AC1 19 HOH A 647 HOH A 660 HOH A 663 SITE 1 AC2 21 ALA B 43 MET B 47 THR B 100 TRP B 101 SITE 2 AC2 21 LEU B 102 HIS B 107 GLY B 108 ASN B 112 SITE 3 AC2 21 SER B 135 ASN B 140 LEU B 141 ARG B 142 SITE 4 AC2 21 GLY B 145 ALA B 146 HOH B 610 HOH B 645 SITE 5 AC2 21 HOH B 668 HOH B 669 HOH B 701 ARG C 57 SITE 6 AC2 21 GLN C 184 SITE 1 AC3 20 ALA C 43 MET C 47 THR C 100 TRP C 101 SITE 2 AC3 20 LEU C 102 HIS C 107 GLY C 108 ASN C 112 SITE 3 AC3 20 THR C 136 ASN C 140 LEU C 141 ARG C 142 SITE 4 AC3 20 GLY C 145 ALA C 146 LYS C 149 HOH C 630 SITE 5 AC3 20 HOH C 679 HOH C 683 HOH C 687 HOH C 707 SITE 1 AC4 22 GLN A 184 ALA D 43 MET D 47 THR D 100 SITE 2 AC4 22 TRP D 101 LEU D 102 HIS D 107 GLY D 108 SITE 3 AC4 22 ASN D 112 SER D 135 THR D 136 ASN D 140 SITE 4 AC4 22 ARG D 142 GLY D 145 ALA D 146 LYS D 149 SITE 5 AC4 22 HOH D 649 HOH D 650 HOH D 656 HOH D 662 SITE 6 AC4 22 HOH D 664 HOH D 686 CRYST1 77.590 92.053 105.331 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012888 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010863 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009494 0.00000