data_1YT7 # _entry.id 1YT7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YT7 pdb_00001yt7 10.2210/pdb1yt7/pdb RCSB RCSB031903 ? ? WWPDB D_1000031903 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 5 'Structure model' 1 4 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YT7 _pdbx_database_status.recvd_initial_deposition_date 2005-02-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1TU6 _pdbx_database_related.details 'Cathepsin K complexed with a ketoamide inhibitor' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Barrett, D.G.' 1 'Boncek, V.M.' 2 'Catalano, J.G.' 3 'Deaton, D.N.' 4 'Hassell, A.M.' 5 'Jurgensen, C.H.' 6 'Long, S.T.' 7 'McFadyen, R.B.' 8 'Miller, A.B.' 9 'Miller, L.R.' 10 'Payne, J.A.' 11 'Ray, J.A.' 12 'Samano, V.' 13 'Shewchuk, L.M.' 14 'Tavares, F.X.' 15 'Wells-Knecht, K.J.' 16 'Willard, D.H.' 17 'Wright, L.L.' 18 'Zhou, H.Q.' 19 # _citation.id primary _citation.title 'P(2)-P(3) conformationally constrained ketoamide-based inhibitors of cathepsin K.' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 15 _citation.page_first 3540 _citation.page_last 3546 _citation.year 2005 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15982880 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2005.05.062 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Barrett, D.G.' 1 ? primary 'Boncek, V.M.' 2 ? primary 'Catalano, J.G.' 3 ? primary 'Deaton, D.N.' 4 ? primary 'Hassell, A.M.' 5 ? primary 'Jurgensen, C.H.' 6 ? primary 'Long, S.T.' 7 ? primary 'McFadyen, R.B.' 8 ? primary 'Miller, A.B.' 9 ? primary 'Miller, L.R.' 10 ? primary 'Payne, J.A.' 11 ? primary 'Ray, J.A.' 12 ? primary 'Samano, V.' 13 ? primary 'Shewchuk, L.M.' 14 ? primary 'Tavares, F.X.' 15 ? primary 'Wells-Knecht, K.J.' 16 ? primary 'Willard, D.H.' 17 ? primary 'Wright, L.L.' 18 ? primary 'Zhou, H.Q.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cathepsin K' 23523.480 1 3.4.22.38 ? 'sequence database residues 115-329' ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn ;(1R)-2,2-DIMETHYL-1-({5-[4-(TRIFLUOROMETHYL)PHENYL]-1,3,4-OXADIAZOL-2-YL}METHYL)PROPYL (1S)-1-{OXO[(2-OXO-1,3-OXAZOLIDIN-3-YL)AMINO]ACETYL}PENTYLCARBAMATE ; 583.557 1 ? ? ? ? 4 water nat water 18.015 105 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cathepsin O, Cathepsin X, Cathepsin O2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM ; _entity_poly.pdbx_seq_one_letter_code_can ;APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 ;(1R)-2,2-DIMETHYL-1-({5-[4-(TRIFLUOROMETHYL)PHENYL]-1,3,4-OXADIAZOL-2-YL}METHYL)PROPYL (1S)-1-{OXO[(2-OXO-1,3-OXAZOLIDIN-3-YL)AMINO]ACETYL}PENTYLCARBAMATE ; 3FC 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 ASP n 1 4 SER n 1 5 VAL n 1 6 ASP n 1 7 TYR n 1 8 ARG n 1 9 LYS n 1 10 LYS n 1 11 GLY n 1 12 TYR n 1 13 VAL n 1 14 THR n 1 15 PRO n 1 16 VAL n 1 17 LYS n 1 18 ASN n 1 19 GLN n 1 20 GLY n 1 21 GLN n 1 22 CYS n 1 23 GLY n 1 24 SER n 1 25 CYS n 1 26 TRP n 1 27 ALA n 1 28 PHE n 1 29 SER n 1 30 SER n 1 31 VAL n 1 32 GLY n 1 33 ALA n 1 34 LEU n 1 35 GLU n 1 36 GLY n 1 37 GLN n 1 38 LEU n 1 39 LYS n 1 40 LYS n 1 41 LYS n 1 42 THR n 1 43 GLY n 1 44 LYS n 1 45 LEU n 1 46 LEU n 1 47 ASN n 1 48 LEU n 1 49 SER n 1 50 PRO n 1 51 GLN n 1 52 ASN n 1 53 LEU n 1 54 VAL n 1 55 ASP n 1 56 CYS n 1 57 VAL n 1 58 SER n 1 59 GLU n 1 60 ASN n 1 61 ASP n 1 62 GLY n 1 63 CYS n 1 64 GLY n 1 65 GLY n 1 66 GLY n 1 67 TYR n 1 68 MET n 1 69 THR n 1 70 ASN n 1 71 ALA n 1 72 PHE n 1 73 GLN n 1 74 TYR n 1 75 VAL n 1 76 GLN n 1 77 LYS n 1 78 ASN n 1 79 ARG n 1 80 GLY n 1 81 ILE n 1 82 ASP n 1 83 SER n 1 84 GLU n 1 85 ASP n 1 86 ALA n 1 87 TYR n 1 88 PRO n 1 89 TYR n 1 90 VAL n 1 91 GLY n 1 92 GLN n 1 93 GLU n 1 94 GLU n 1 95 SER n 1 96 CYS n 1 97 MET n 1 98 TYR n 1 99 ASN n 1 100 PRO n 1 101 THR n 1 102 GLY n 1 103 LYS n 1 104 ALA n 1 105 ALA n 1 106 LYS n 1 107 CYS n 1 108 ARG n 1 109 GLY n 1 110 TYR n 1 111 ARG n 1 112 GLU n 1 113 ILE n 1 114 PRO n 1 115 GLU n 1 116 GLY n 1 117 ASN n 1 118 GLU n 1 119 LYS n 1 120 ALA n 1 121 LEU n 1 122 LYS n 1 123 ARG n 1 124 ALA n 1 125 VAL n 1 126 ALA n 1 127 ARG n 1 128 VAL n 1 129 GLY n 1 130 PRO n 1 131 VAL n 1 132 SER n 1 133 VAL n 1 134 ALA n 1 135 ILE n 1 136 ASP n 1 137 ALA n 1 138 SER n 1 139 LEU n 1 140 THR n 1 141 SER n 1 142 PHE n 1 143 GLN n 1 144 PHE n 1 145 TYR n 1 146 SER n 1 147 LYS n 1 148 GLY n 1 149 VAL n 1 150 TYR n 1 151 TYR n 1 152 ASP n 1 153 GLU n 1 154 SER n 1 155 CYS n 1 156 ASN n 1 157 SER n 1 158 ASP n 1 159 ASN n 1 160 LEU n 1 161 ASN n 1 162 HIS n 1 163 ALA n 1 164 VAL n 1 165 LEU n 1 166 ALA n 1 167 VAL n 1 168 GLY n 1 169 TYR n 1 170 GLY n 1 171 ILE n 1 172 GLN n 1 173 LYS n 1 174 GLY n 1 175 ASN n 1 176 LYS n 1 177 HIS n 1 178 TRP n 1 179 ILE n 1 180 ILE n 1 181 LYS n 1 182 ASN n 1 183 SER n 1 184 TRP n 1 185 GLY n 1 186 GLU n 1 187 ASN n 1 188 TRP n 1 189 GLY n 1 190 ASN n 1 191 LYS n 1 192 GLY n 1 193 TYR n 1 194 ILE n 1 195 LEU n 1 196 MET n 1 197 ALA n 1 198 ARG n 1 199 ASN n 1 200 LYS n 1 201 ASN n 1 202 ASN n 1 203 ALA n 1 204 CYS n 1 205 GLY n 1 206 ILE n 1 207 ALA n 1 208 ASN n 1 209 LEU n 1 210 ALA n 1 211 SER n 1 212 PHE n 1 213 PRO n 1 214 LYS n 1 215 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'CTSK, CTSO, CTSO2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus Spodoptera _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pFASTBAC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3FC non-polymer . ;(1R)-2,2-DIMETHYL-1-({5-[4-(TRIFLUOROMETHYL)PHENYL]-1,3,4-OXADIAZOL-2-YL}METHYL)PROPYL (1S)-1-{OXO[(2-OXO-1,3-OXAZOLIDIN-3-YL)AMINO]ACETYL}PENTYLCARBAMATE ; ? 'C26 H32 F3 N5 O7' 583.557 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 CYS 56 56 56 CYS CYS A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 CYS 63 63 63 CYS CYS A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 MET 97 97 97 MET MET A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 CYS 107 107 107 CYS CYS A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 GLN 143 143 143 GLN GLN A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 TYR 145 145 145 TYR TYR A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 CYS 155 155 155 CYS CYS A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 HIS 162 162 162 HIS HIS A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 TYR 169 169 169 TYR TYR A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 GLN 172 172 172 GLN GLN A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 HIS 177 177 177 HIS HIS A . n A 1 178 TRP 178 178 178 TRP TRP A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 TRP 184 184 184 TRP TRP A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 ASN 187 187 187 ASN ASN A . n A 1 188 TRP 188 188 188 TRP TRP A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASN 190 190 190 ASN ASN A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 TYR 193 193 193 TYR TYR A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 MET 196 196 196 MET MET A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 ASN 199 199 199 ASN ASN A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 ASN 201 201 201 ASN ASN A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 CYS 204 204 204 CYS CYS A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 ILE 206 206 206 ILE ILE A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 ASN 208 208 208 ASN ASN A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 ALA 210 210 210 ALA ALA A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 PHE 212 212 212 PHE PHE A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 MET 215 215 215 MET MET A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 216 1 SO4 SO4 A . C 2 SO4 1 217 2 SO4 SO4 A . D 3 3FC 1 301 1 3FC LIG A . E 4 HOH 1 302 1 HOH HOH A . E 4 HOH 2 303 2 HOH HOH A . E 4 HOH 3 304 3 HOH HOH A . E 4 HOH 4 305 4 HOH HOH A . E 4 HOH 5 306 5 HOH HOH A . E 4 HOH 6 307 6 HOH HOH A . E 4 HOH 7 308 7 HOH HOH A . E 4 HOH 8 309 8 HOH HOH A . E 4 HOH 9 310 9 HOH HOH A . E 4 HOH 10 311 10 HOH HOH A . E 4 HOH 11 312 11 HOH HOH A . E 4 HOH 12 313 12 HOH HOH A . E 4 HOH 13 314 13 HOH HOH A . E 4 HOH 14 315 14 HOH HOH A . E 4 HOH 15 316 15 HOH HOH A . E 4 HOH 16 317 16 HOH HOH A . E 4 HOH 17 318 17 HOH HOH A . E 4 HOH 18 319 18 HOH HOH A . E 4 HOH 19 320 19 HOH HOH A . E 4 HOH 20 321 20 HOH HOH A . E 4 HOH 21 322 21 HOH HOH A . E 4 HOH 22 323 22 HOH HOH A . E 4 HOH 23 324 23 HOH HOH A . E 4 HOH 24 325 24 HOH HOH A . E 4 HOH 25 326 25 HOH HOH A . E 4 HOH 26 327 26 HOH HOH A . E 4 HOH 27 328 27 HOH HOH A . E 4 HOH 28 329 28 HOH HOH A . E 4 HOH 29 330 29 HOH HOH A . E 4 HOH 30 331 30 HOH HOH A . E 4 HOH 31 332 31 HOH HOH A . E 4 HOH 32 333 32 HOH HOH A . E 4 HOH 33 334 33 HOH HOH A . E 4 HOH 34 335 34 HOH HOH A . E 4 HOH 35 336 35 HOH HOH A . E 4 HOH 36 337 36 HOH HOH A . E 4 HOH 37 338 37 HOH HOH A . E 4 HOH 38 339 38 HOH HOH A . E 4 HOH 39 340 39 HOH HOH A . E 4 HOH 40 341 40 HOH HOH A . E 4 HOH 41 342 41 HOH HOH A . E 4 HOH 42 343 42 HOH HOH A . E 4 HOH 43 344 43 HOH HOH A . E 4 HOH 44 345 44 HOH HOH A . E 4 HOH 45 346 45 HOH HOH A . E 4 HOH 46 347 46 HOH HOH A . E 4 HOH 47 348 47 HOH HOH A . E 4 HOH 48 349 48 HOH HOH A . E 4 HOH 49 350 49 HOH HOH A . E 4 HOH 50 351 50 HOH HOH A . E 4 HOH 51 352 51 HOH HOH A . E 4 HOH 52 353 52 HOH HOH A . E 4 HOH 53 354 53 HOH HOH A . E 4 HOH 54 355 54 HOH HOH A . E 4 HOH 55 356 55 HOH HOH A . E 4 HOH 56 357 56 HOH HOH A . E 4 HOH 57 358 57 HOH HOH A . E 4 HOH 58 359 58 HOH HOH A . E 4 HOH 59 360 59 HOH HOH A . E 4 HOH 60 361 60 HOH HOH A . E 4 HOH 61 362 61 HOH HOH A . E 4 HOH 62 363 62 HOH HOH A . E 4 HOH 63 364 63 HOH HOH A . E 4 HOH 64 365 64 HOH HOH A . E 4 HOH 65 366 65 HOH HOH A . E 4 HOH 66 367 66 HOH HOH A . E 4 HOH 67 368 67 HOH HOH A . E 4 HOH 68 369 68 HOH HOH A . E 4 HOH 69 370 69 HOH HOH A . E 4 HOH 70 371 70 HOH HOH A . E 4 HOH 71 372 71 HOH HOH A . E 4 HOH 72 373 72 HOH HOH A . E 4 HOH 73 374 73 HOH HOH A . E 4 HOH 74 375 74 HOH HOH A . E 4 HOH 75 376 75 HOH HOH A . E 4 HOH 76 377 76 HOH HOH A . E 4 HOH 77 378 77 HOH HOH A . E 4 HOH 78 379 78 HOH HOH A . E 4 HOH 79 380 79 HOH HOH A . E 4 HOH 80 381 80 HOH HOH A . E 4 HOH 81 382 81 HOH HOH A . E 4 HOH 82 383 82 HOH HOH A . E 4 HOH 83 384 83 HOH HOH A . E 4 HOH 84 385 84 HOH HOH A . E 4 HOH 85 386 85 HOH HOH A . E 4 HOH 86 387 86 HOH HOH A . E 4 HOH 87 388 87 HOH HOH A . E 4 HOH 88 389 88 HOH HOH A . E 4 HOH 89 390 89 HOH HOH A . E 4 HOH 90 391 90 HOH HOH A . E 4 HOH 91 392 91 HOH HOH A . E 4 HOH 92 393 92 HOH HOH A . E 4 HOH 93 394 93 HOH HOH A . E 4 HOH 94 395 94 HOH HOH A . E 4 HOH 95 396 95 HOH HOH A . E 4 HOH 96 397 96 HOH HOH A . E 4 HOH 97 398 97 HOH HOH A . E 4 HOH 98 399 98 HOH HOH A . E 4 HOH 99 400 99 HOH HOH A . E 4 HOH 100 401 100 HOH HOH A . E 4 HOH 101 402 101 HOH HOH A . E 4 HOH 102 403 102 HOH HOH A . E 4 HOH 103 404 103 HOH HOH A . E 4 HOH 104 405 104 HOH HOH A . E 4 HOH 105 406 105 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 44 ? CG ? A LYS 44 CG 2 1 Y 1 A LYS 44 ? CD ? A LYS 44 CD 3 1 Y 1 A LYS 44 ? CE ? A LYS 44 CE 4 1 Y 1 A LYS 44 ? NZ ? A LYS 44 NZ 5 1 Y 1 A ARG 108 ? CG ? A ARG 108 CG 6 1 Y 1 A ARG 108 ? CD ? A ARG 108 CD 7 1 Y 1 A ARG 108 ? NE ? A ARG 108 NE 8 1 Y 1 A ARG 108 ? CZ ? A ARG 108 CZ 9 1 Y 1 A ARG 108 ? NH1 ? A ARG 108 NH1 10 1 Y 1 A ARG 108 ? NH2 ? A ARG 108 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1YT7 _cell.length_a 65.645 _cell.length_b 65.645 _cell.length_c 34.467 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.pdbx_unique_axis ? _cell.Z_PDB 3 # _symmetry.entry_id 1YT7 _symmetry.space_group_name_H-M 'P 32' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 145 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 1YT7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.86 _exptl_crystal.density_percent_sol 31.5 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.2M AMMONIUM SULFATE, 30% PEG8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 2001-01-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Yale mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 1YT7 _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 18.24 _reflns.number_all 7170 _reflns.number_obs 7078 _reflns.percent_possible_obs 96 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.7 _reflns.B_iso_Wilson_estimate 14.4 _reflns.pdbx_redundancy 2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.44 _reflns_shell.percent_possible_all 91.1 _reflns_shell.Rmerge_I_obs 0.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.8 _reflns_shell.pdbx_redundancy 2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1003 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YT7 _refine.ls_d_res_high 2.3 _refine.ls_d_res_low 18 _refine.pdbx_ls_sigma_F 1 _refine.pdbx_ls_sigma_I 1 _refine.ls_number_reflns_all 7170 _refine.ls_number_reflns_obs 7078 _refine.ls_number_reflns_R_free 770 _refine.ls_percent_reflns_obs 96 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.251 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1Q6K' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model anisotropic _refine.B_iso_mean 18.4 _refine.aniso_B[1][1] -2.61 _refine.aniso_B[1][2] 1.54 _refine.aniso_B[1][3] 0.0 _refine.aniso_B[2][2] -2.61 _refine.aniso_B[2][3] 0.0 _refine.aniso_B[3][3] 5.22 _refine.details 'mask method used for bulk solvent correction' _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YT7 _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs 0.23 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1634 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 1790 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 18 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.78 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.3 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.233 _refine_ls_shell.percent_reflns_obs 91.1 _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 119 _refine_ls_shell.number_reflns_obs 1003 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1YT7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1YT7 _struct.title 'Cathepsin K complexed with a constrained ketoamide inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YT7 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'cathepsin, cysteine protease, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CATK_HUMAN _struct_ref.pdbx_db_accession P43235 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM ; _struct_ref.pdbx_align_begin 115 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YT7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 215 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P43235 _struct_ref_seq.db_align_beg 115 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 329 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 215 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 7 ? GLY A 11 ? TYR A 7 GLY A 11 1 ? 5 HELX_P HELX_P2 2 SER A 24 ? GLY A 43 ? SER A 24 GLY A 43 1 ? 20 HELX_P HELX_P3 3 SER A 49 ? VAL A 57 ? SER A 49 VAL A 57 1 ? 9 HELX_P HELX_P4 4 ASP A 61 ? GLY A 65 ? ASP A 61 GLY A 65 5 ? 5 HELX_P HELX_P5 5 TYR A 67 ? ARG A 79 ? TYR A 67 ARG A 79 1 ? 13 HELX_P HELX_P6 6 ASN A 99 ? THR A 101 ? ASN A 99 THR A 101 5 ? 3 HELX_P HELX_P7 7 ASN A 117 ? VAL A 128 ? ASN A 117 VAL A 128 1 ? 12 HELX_P HELX_P8 8 LEU A 139 ? PHE A 144 ? LEU A 139 PHE A 144 1 ? 6 HELX_P HELX_P9 9 ASN A 202 ? ILE A 206 ? ASN A 202 ILE A 206 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 63 SG ? ? A CYS 22 A CYS 63 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf2 disulf ? ? A CYS 56 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 56 A CYS 96 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? A CYS 155 SG ? ? ? 1_555 A CYS 204 SG ? ? A CYS 155 A CYS 204 1_555 ? ? ? ? ? ? ? 2.029 ? ? covale1 covale none ? A CYS 25 SG ? ? ? 1_555 D 3FC . C31 ? ? A CYS 25 A 3FC 301 1_555 ? ? ? ? ? ? ? 2.014 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 3FC D . ? CYS A 25 ? 3FC A 301 ? 1_555 CYS A 25 ? 1_555 C31 SG CYS 1 3FC None 'Covalent chemical modification' 2 CYS A 22 ? CYS A 63 ? CYS A 22 ? 1_555 CYS A 63 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 56 ? CYS A 96 ? CYS A 56 ? 1_555 CYS A 96 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 155 ? CYS A 204 ? CYS A 155 ? 1_555 CYS A 204 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6 A 2 HIS A 162 ? GLN A 172 ? HIS A 162 GLN A 172 A 3 VAL A 131 ? ILE A 135 ? VAL A 131 ILE A 135 B 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6 B 2 HIS A 162 ? GLN A 172 ? HIS A 162 GLN A 172 B 3 ASN A 175 ? LYS A 181 ? ASN A 175 LYS A 181 B 4 TYR A 193 ? ALA A 197 ? TYR A 193 ALA A 197 B 5 VAL A 149 ? TYR A 150 ? VAL A 149 TYR A 150 C 1 ILE A 81 ? ASP A 82 ? ILE A 81 ASP A 82 C 2 LYS A 103 ? ALA A 105 ? LYS A 103 ALA A 105 D 1 TYR A 110 ? GLU A 112 ? TYR A 110 GLU A 112 D 2 SER A 211 ? PRO A 213 ? SER A 211 PRO A 213 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL A 5 O TYR A 169 ? O TYR A 169 A 2 3 O ALA A 166 ? O ALA A 166 N VAL A 131 ? N VAL A 131 B 1 2 N VAL A 5 ? N VAL A 5 O TYR A 169 ? O TYR A 169 B 2 3 N LEU A 165 ? N LEU A 165 O LYS A 181 ? O LYS A 181 B 3 4 N TRP A 178 ? N TRP A 178 O MET A 196 ? O MET A 196 B 4 5 O LEU A 195 ? O LEU A 195 N TYR A 150 ? N TYR A 150 C 1 2 N ILE A 81 ? N ILE A 81 O ALA A 104 ? O ALA A 104 D 1 2 N ARG A 111 ? N ARG A 111 O PHE A 212 ? O PHE A 212 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 216 ? 5 'BINDING SITE FOR RESIDUE SO4 A 216' AC2 Software A SO4 217 ? 6 'BINDING SITE FOR RESIDUE SO4 A 217' AC3 Software A 3FC 301 ? 24 'BINDING SITE FOR RESIDUE 3FC A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS A 63 ? CYS A 63 . ? 1_555 ? 2 AC1 5 GLN A 92 ? GLN A 92 . ? 1_555 ? 3 AC1 5 GLU A 93 ? GLU A 93 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 353 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 391 . ? 1_555 ? 6 AC2 6 LYS A 119 ? LYS A 119 . ? 1_555 ? 7 AC2 6 LYS A 122 ? LYS A 122 . ? 1_555 ? 8 AC2 6 ASN A 199 ? ASN A 199 . ? 1_555 ? 9 AC2 6 HOH E . ? HOH A 339 . ? 1_555 ? 10 AC2 6 HOH E . ? HOH A 386 . ? 1_555 ? 11 AC2 6 HOH E . ? HOH A 403 . ? 1_555 ? 12 AC3 24 GLN A 19 ? GLN A 19 . ? 1_555 ? 13 AC3 24 GLY A 20 ? GLY A 20 . ? 1_555 ? 14 AC3 24 GLN A 21 ? GLN A 21 . ? 1_555 ? 15 AC3 24 GLY A 23 ? GLY A 23 . ? 1_555 ? 16 AC3 24 SER A 24 ? SER A 24 . ? 1_555 ? 17 AC3 24 CYS A 25 ? CYS A 25 . ? 1_555 ? 18 AC3 24 TRP A 26 ? TRP A 26 . ? 1_555 ? 19 AC3 24 ASP A 61 ? ASP A 61 . ? 1_555 ? 20 AC3 24 GLY A 64 ? GLY A 64 . ? 1_555 ? 21 AC3 24 GLY A 65 ? GLY A 65 . ? 1_555 ? 22 AC3 24 GLY A 66 ? GLY A 66 . ? 1_555 ? 23 AC3 24 TYR A 67 ? TYR A 67 . ? 1_555 ? 24 AC3 24 TYR A 74 ? TYR A 74 . ? 2_764 ? 25 AC3 24 LYS A 77 ? LYS A 77 . ? 2_764 ? 26 AC3 24 ASN A 78 ? ASN A 78 . ? 2_764 ? 27 AC3 24 ARG A 127 ? ARG A 127 . ? 1_554 ? 28 AC3 24 ASN A 161 ? ASN A 161 . ? 1_555 ? 29 AC3 24 HIS A 162 ? HIS A 162 . ? 1_555 ? 30 AC3 24 ALA A 163 ? ALA A 163 . ? 1_555 ? 31 AC3 24 TRP A 184 ? TRP A 184 . ? 1_555 ? 32 AC3 24 HOH E . ? HOH A 358 . ? 2_764 ? 33 AC3 24 HOH E . ? HOH A 368 . ? 2_764 ? 34 AC3 24 HOH E . ? HOH A 389 . ? 1_555 ? 35 AC3 24 HOH E . ? HOH A 390 . ? 1_555 ? # _pdbx_entry_details.entry_id 1YT7 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 25 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C5 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 3FC _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 146 ? ? -149.15 -35.09 2 1 ASN A 159 ? ? -106.45 61.31 3 1 ASN A 161 ? ? -143.80 -1.48 4 1 LYS A 200 ? ? -107.34 48.85 5 1 ASN A 201 ? ? 73.04 48.39 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id ALA _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id ALA _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3FC C1 C N N 1 3FC C2 C N N 2 3FC C3 C N N 3 3FC C4 C N N 4 3FC C5 C N S 5 3FC N6 N N N 6 3FC C7 C N N 7 3FC O8 O N N 8 3FC O9 O N N 9 3FC C10 C N R 10 3FC C11 C N N 11 3FC C12 C Y N 12 3FC N13 N Y N 13 3FC N14 N Y N 14 3FC C15 C Y N 15 3FC O16 O Y N 16 3FC C17 C Y N 17 3FC C18 C Y N 18 3FC C19 C Y N 19 3FC C20 C Y N 20 3FC C21 C Y N 21 3FC C22 C Y N 22 3FC C23 C N N 23 3FC F24 F N N 24 3FC F25 F N N 25 3FC F26 F N N 26 3FC C27 C N N 27 3FC C28 C N N 28 3FC C29 C N N 29 3FC C30 C N N 30 3FC C33 C N N 31 3FC O34 O N N 32 3FC N35 N N N 33 3FC N36 N N N 34 3FC C37 C N N 35 3FC C38 C N N 36 3FC O39 O N N 37 3FC C40 C N N 38 3FC O41 O N N 39 3FC C31 C N N 40 3FC O32 O N N 41 3FC H11 H N N 42 3FC H12 H N N 43 3FC H13 H N N 44 3FC H21A H N N 45 3FC H22A H N N 46 3FC H31 H N N 47 3FC H32 H N N 48 3FC H41 H N N 49 3FC H42 H N N 50 3FC H5 H N N 51 3FC HN6 H N N 52 3FC H10 H N N 53 3FC H111 H N N 54 3FC H112 H N N 55 3FC H18 H N N 56 3FC H19 H N N 57 3FC H21 H N N 58 3FC H22 H N N 59 3FC H281 H N N 60 3FC H282 H N N 61 3FC H283 H N N 62 3FC H291 H N N 63 3FC H292 H N N 64 3FC H293 H N N 65 3FC H301 H N N 66 3FC H302 H N N 67 3FC H303 H N N 68 3FC H35 H N N 69 3FC H371 H N N 70 3FC H372 H N N 71 3FC H381 H N N 72 3FC H382 H N N 73 ALA N N N N 74 ALA CA C N S 75 ALA C C N N 76 ALA O O N N 77 ALA CB C N N 78 ALA OXT O N N 79 ALA H H N N 80 ALA H2 H N N 81 ALA HA H N N 82 ALA HB1 H N N 83 ALA HB2 H N N 84 ALA HB3 H N N 85 ALA HXT H N N 86 ARG N N N N 87 ARG CA C N S 88 ARG C C N N 89 ARG O O N N 90 ARG CB C N N 91 ARG CG C N N 92 ARG CD C N N 93 ARG NE N N N 94 ARG CZ C N N 95 ARG NH1 N N N 96 ARG NH2 N N N 97 ARG OXT O N N 98 ARG H H N N 99 ARG H2 H N N 100 ARG HA H N N 101 ARG HB2 H N N 102 ARG HB3 H N N 103 ARG HG2 H N N 104 ARG HG3 H N N 105 ARG HD2 H N N 106 ARG HD3 H N N 107 ARG HE H N N 108 ARG HH11 H N N 109 ARG HH12 H N N 110 ARG HH21 H N N 111 ARG HH22 H N N 112 ARG HXT H N N 113 ASN N N N N 114 ASN CA C N S 115 ASN C C N N 116 ASN O O N N 117 ASN CB C N N 118 ASN CG C N N 119 ASN OD1 O N N 120 ASN ND2 N N N 121 ASN OXT O N N 122 ASN H H N N 123 ASN H2 H N N 124 ASN HA H N N 125 ASN HB2 H N N 126 ASN HB3 H N N 127 ASN HD21 H N N 128 ASN HD22 H N N 129 ASN HXT H N N 130 ASP N N N N 131 ASP CA C N S 132 ASP C C N N 133 ASP O O N N 134 ASP CB C N N 135 ASP CG C N N 136 ASP OD1 O N N 137 ASP OD2 O N N 138 ASP OXT O N N 139 ASP H H N N 140 ASP H2 H N N 141 ASP HA H N N 142 ASP HB2 H N N 143 ASP HB3 H N N 144 ASP HD2 H N N 145 ASP HXT H N N 146 CYS N N N N 147 CYS CA C N R 148 CYS C C N N 149 CYS O O N N 150 CYS CB C N N 151 CYS SG S N N 152 CYS OXT O N N 153 CYS H H N N 154 CYS H2 H N N 155 CYS HA H N N 156 CYS HB2 H N N 157 CYS HB3 H N N 158 CYS HG H N N 159 CYS HXT H N N 160 GLN N N N N 161 GLN CA C N S 162 GLN C C N N 163 GLN O O N N 164 GLN CB C N N 165 GLN CG C N N 166 GLN CD C N N 167 GLN OE1 O N N 168 GLN NE2 N N N 169 GLN OXT O N N 170 GLN H H N N 171 GLN H2 H N N 172 GLN HA H N N 173 GLN HB2 H N N 174 GLN HB3 H N N 175 GLN HG2 H N N 176 GLN HG3 H N N 177 GLN HE21 H N N 178 GLN HE22 H N N 179 GLN HXT H N N 180 GLU N N N N 181 GLU CA C N S 182 GLU C C N N 183 GLU O O N N 184 GLU CB C N N 185 GLU CG C N N 186 GLU CD C N N 187 GLU OE1 O N N 188 GLU OE2 O N N 189 GLU OXT O N N 190 GLU H H N N 191 GLU H2 H N N 192 GLU HA H N N 193 GLU HB2 H N N 194 GLU HB3 H N N 195 GLU HG2 H N N 196 GLU HG3 H N N 197 GLU HE2 H N N 198 GLU HXT H N N 199 GLY N N N N 200 GLY CA C N N 201 GLY C C N N 202 GLY O O N N 203 GLY OXT O N N 204 GLY H H N N 205 GLY H2 H N N 206 GLY HA2 H N N 207 GLY HA3 H N N 208 GLY HXT H N N 209 HIS N N N N 210 HIS CA C N S 211 HIS C C N N 212 HIS O O N N 213 HIS CB C N N 214 HIS CG C Y N 215 HIS ND1 N Y N 216 HIS CD2 C Y N 217 HIS CE1 C Y N 218 HIS NE2 N Y N 219 HIS OXT O N N 220 HIS H H N N 221 HIS H2 H N N 222 HIS HA H N N 223 HIS HB2 H N N 224 HIS HB3 H N N 225 HIS HD1 H N N 226 HIS HD2 H N N 227 HIS HE1 H N N 228 HIS HE2 H N N 229 HIS HXT H N N 230 HOH O O N N 231 HOH H1 H N N 232 HOH H2 H N N 233 ILE N N N N 234 ILE CA C N S 235 ILE C C N N 236 ILE O O N N 237 ILE CB C N S 238 ILE CG1 C N N 239 ILE CG2 C N N 240 ILE CD1 C N N 241 ILE OXT O N N 242 ILE H H N N 243 ILE H2 H N N 244 ILE HA H N N 245 ILE HB H N N 246 ILE HG12 H N N 247 ILE HG13 H N N 248 ILE HG21 H N N 249 ILE HG22 H N N 250 ILE HG23 H N N 251 ILE HD11 H N N 252 ILE HD12 H N N 253 ILE HD13 H N N 254 ILE HXT H N N 255 LEU N N N N 256 LEU CA C N S 257 LEU C C N N 258 LEU O O N N 259 LEU CB C N N 260 LEU CG C N N 261 LEU CD1 C N N 262 LEU CD2 C N N 263 LEU OXT O N N 264 LEU H H N N 265 LEU H2 H N N 266 LEU HA H N N 267 LEU HB2 H N N 268 LEU HB3 H N N 269 LEU HG H N N 270 LEU HD11 H N N 271 LEU HD12 H N N 272 LEU HD13 H N N 273 LEU HD21 H N N 274 LEU HD22 H N N 275 LEU HD23 H N N 276 LEU HXT H N N 277 LYS N N N N 278 LYS CA C N S 279 LYS C C N N 280 LYS O O N N 281 LYS CB C N N 282 LYS CG C N N 283 LYS CD C N N 284 LYS CE C N N 285 LYS NZ N N N 286 LYS OXT O N N 287 LYS H H N N 288 LYS H2 H N N 289 LYS HA H N N 290 LYS HB2 H N N 291 LYS HB3 H N N 292 LYS HG2 H N N 293 LYS HG3 H N N 294 LYS HD2 H N N 295 LYS HD3 H N N 296 LYS HE2 H N N 297 LYS HE3 H N N 298 LYS HZ1 H N N 299 LYS HZ2 H N N 300 LYS HZ3 H N N 301 LYS HXT H N N 302 MET N N N N 303 MET CA C N S 304 MET C C N N 305 MET O O N N 306 MET CB C N N 307 MET CG C N N 308 MET SD S N N 309 MET CE C N N 310 MET OXT O N N 311 MET H H N N 312 MET H2 H N N 313 MET HA H N N 314 MET HB2 H N N 315 MET HB3 H N N 316 MET HG2 H N N 317 MET HG3 H N N 318 MET HE1 H N N 319 MET HE2 H N N 320 MET HE3 H N N 321 MET HXT H N N 322 PHE N N N N 323 PHE CA C N S 324 PHE C C N N 325 PHE O O N N 326 PHE CB C N N 327 PHE CG C Y N 328 PHE CD1 C Y N 329 PHE CD2 C Y N 330 PHE CE1 C Y N 331 PHE CE2 C Y N 332 PHE CZ C Y N 333 PHE OXT O N N 334 PHE H H N N 335 PHE H2 H N N 336 PHE HA H N N 337 PHE HB2 H N N 338 PHE HB3 H N N 339 PHE HD1 H N N 340 PHE HD2 H N N 341 PHE HE1 H N N 342 PHE HE2 H N N 343 PHE HZ H N N 344 PHE HXT H N N 345 PRO N N N N 346 PRO CA C N S 347 PRO C C N N 348 PRO O O N N 349 PRO CB C N N 350 PRO CG C N N 351 PRO CD C N N 352 PRO OXT O N N 353 PRO H H N N 354 PRO HA H N N 355 PRO HB2 H N N 356 PRO HB3 H N N 357 PRO HG2 H N N 358 PRO HG3 H N N 359 PRO HD2 H N N 360 PRO HD3 H N N 361 PRO HXT H N N 362 SER N N N N 363 SER CA C N S 364 SER C C N N 365 SER O O N N 366 SER CB C N N 367 SER OG O N N 368 SER OXT O N N 369 SER H H N N 370 SER H2 H N N 371 SER HA H N N 372 SER HB2 H N N 373 SER HB3 H N N 374 SER HG H N N 375 SER HXT H N N 376 SO4 S S N N 377 SO4 O1 O N N 378 SO4 O2 O N N 379 SO4 O3 O N N 380 SO4 O4 O N N 381 THR N N N N 382 THR CA C N S 383 THR C C N N 384 THR O O N N 385 THR CB C N R 386 THR OG1 O N N 387 THR CG2 C N N 388 THR OXT O N N 389 THR H H N N 390 THR H2 H N N 391 THR HA H N N 392 THR HB H N N 393 THR HG1 H N N 394 THR HG21 H N N 395 THR HG22 H N N 396 THR HG23 H N N 397 THR HXT H N N 398 TRP N N N N 399 TRP CA C N S 400 TRP C C N N 401 TRP O O N N 402 TRP CB C N N 403 TRP CG C Y N 404 TRP CD1 C Y N 405 TRP CD2 C Y N 406 TRP NE1 N Y N 407 TRP CE2 C Y N 408 TRP CE3 C Y N 409 TRP CZ2 C Y N 410 TRP CZ3 C Y N 411 TRP CH2 C Y N 412 TRP OXT O N N 413 TRP H H N N 414 TRP H2 H N N 415 TRP HA H N N 416 TRP HB2 H N N 417 TRP HB3 H N N 418 TRP HD1 H N N 419 TRP HE1 H N N 420 TRP HE3 H N N 421 TRP HZ2 H N N 422 TRP HZ3 H N N 423 TRP HH2 H N N 424 TRP HXT H N N 425 TYR N N N N 426 TYR CA C N S 427 TYR C C N N 428 TYR O O N N 429 TYR CB C N N 430 TYR CG C Y N 431 TYR CD1 C Y N 432 TYR CD2 C Y N 433 TYR CE1 C Y N 434 TYR CE2 C Y N 435 TYR CZ C Y N 436 TYR OH O N N 437 TYR OXT O N N 438 TYR H H N N 439 TYR H2 H N N 440 TYR HA H N N 441 TYR HB2 H N N 442 TYR HB3 H N N 443 TYR HD1 H N N 444 TYR HD2 H N N 445 TYR HE1 H N N 446 TYR HE2 H N N 447 TYR HH H N N 448 TYR HXT H N N 449 VAL N N N N 450 VAL CA C N S 451 VAL C C N N 452 VAL O O N N 453 VAL CB C N N 454 VAL CG1 C N N 455 VAL CG2 C N N 456 VAL OXT O N N 457 VAL H H N N 458 VAL H2 H N N 459 VAL HA H N N 460 VAL HB H N N 461 VAL HG11 H N N 462 VAL HG12 H N N 463 VAL HG13 H N N 464 VAL HG21 H N N 465 VAL HG22 H N N 466 VAL HG23 H N N 467 VAL HXT H N N 468 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3FC C1 C2 sing N N 1 3FC C1 H11 sing N N 2 3FC C1 H12 sing N N 3 3FC C1 H13 sing N N 4 3FC C2 C3 sing N N 5 3FC C2 H21A sing N N 6 3FC C2 H22A sing N N 7 3FC C3 C4 sing N N 8 3FC C3 H31 sing N N 9 3FC C3 H32 sing N N 10 3FC C4 C5 sing N N 11 3FC C4 H41 sing N N 12 3FC C4 H42 sing N N 13 3FC C5 N6 sing N N 14 3FC C5 C31 sing N N 15 3FC C5 H5 sing N N 16 3FC N6 C7 sing N N 17 3FC N6 HN6 sing N N 18 3FC C7 O8 doub N N 19 3FC C7 O9 sing N N 20 3FC O9 C10 sing N N 21 3FC C10 C11 sing N N 22 3FC C10 C27 sing N N 23 3FC C10 H10 sing N N 24 3FC C11 C12 sing N N 25 3FC C11 H111 sing N N 26 3FC C11 H112 sing N N 27 3FC C12 N13 doub Y N 28 3FC C12 O16 sing Y N 29 3FC N13 N14 sing Y N 30 3FC N14 C15 doub Y N 31 3FC C15 O16 sing Y N 32 3FC C15 C17 sing Y N 33 3FC C17 C18 doub Y N 34 3FC C17 C22 sing Y N 35 3FC C18 C19 sing Y N 36 3FC C18 H18 sing N N 37 3FC C19 C20 doub Y N 38 3FC C19 H19 sing N N 39 3FC C20 C21 sing Y N 40 3FC C20 C23 sing N N 41 3FC C21 C22 doub Y N 42 3FC C21 H21 sing N N 43 3FC C22 H22 sing N N 44 3FC C23 F24 sing N N 45 3FC C23 F25 sing N N 46 3FC C23 F26 sing N N 47 3FC C27 C28 sing N N 48 3FC C27 C29 sing N N 49 3FC C27 C30 sing N N 50 3FC C28 H281 sing N N 51 3FC C28 H282 sing N N 52 3FC C28 H283 sing N N 53 3FC C29 H291 sing N N 54 3FC C29 H292 sing N N 55 3FC C29 H293 sing N N 56 3FC C30 H301 sing N N 57 3FC C30 H302 sing N N 58 3FC C30 H303 sing N N 59 3FC C33 O34 doub N N 60 3FC C33 N35 sing N N 61 3FC C33 C31 sing N N 62 3FC N35 N36 sing N N 63 3FC N35 H35 sing N N 64 3FC N36 C37 sing N N 65 3FC N36 C40 sing N N 66 3FC C37 C38 sing N N 67 3FC C37 H371 sing N N 68 3FC C37 H372 sing N N 69 3FC C38 O39 sing N N 70 3FC C38 H381 sing N N 71 3FC C38 H382 sing N N 72 3FC O39 C40 sing N N 73 3FC C40 O41 doub N N 74 3FC C31 O32 doub N N 75 ALA N CA sing N N 76 ALA N H sing N N 77 ALA N H2 sing N N 78 ALA CA C sing N N 79 ALA CA CB sing N N 80 ALA CA HA sing N N 81 ALA C O doub N N 82 ALA C OXT sing N N 83 ALA CB HB1 sing N N 84 ALA CB HB2 sing N N 85 ALA CB HB3 sing N N 86 ALA OXT HXT sing N N 87 ARG N CA sing N N 88 ARG N H sing N N 89 ARG N H2 sing N N 90 ARG CA C sing N N 91 ARG CA CB sing N N 92 ARG CA HA sing N N 93 ARG C O doub N N 94 ARG C OXT sing N N 95 ARG CB CG sing N N 96 ARG CB HB2 sing N N 97 ARG CB HB3 sing N N 98 ARG CG CD sing N N 99 ARG CG HG2 sing N N 100 ARG CG HG3 sing N N 101 ARG CD NE sing N N 102 ARG CD HD2 sing N N 103 ARG CD HD3 sing N N 104 ARG NE CZ sing N N 105 ARG NE HE sing N N 106 ARG CZ NH1 sing N N 107 ARG CZ NH2 doub N N 108 ARG NH1 HH11 sing N N 109 ARG NH1 HH12 sing N N 110 ARG NH2 HH21 sing N N 111 ARG NH2 HH22 sing N N 112 ARG OXT HXT sing N N 113 ASN N CA sing N N 114 ASN N H sing N N 115 ASN N H2 sing N N 116 ASN CA C sing N N 117 ASN CA CB sing N N 118 ASN CA HA sing N N 119 ASN C O doub N N 120 ASN C OXT sing N N 121 ASN CB CG sing N N 122 ASN CB HB2 sing N N 123 ASN CB HB3 sing N N 124 ASN CG OD1 doub N N 125 ASN CG ND2 sing N N 126 ASN ND2 HD21 sing N N 127 ASN ND2 HD22 sing N N 128 ASN OXT HXT sing N N 129 ASP N CA sing N N 130 ASP N H sing N N 131 ASP N H2 sing N N 132 ASP CA C sing N N 133 ASP CA CB sing N N 134 ASP CA HA sing N N 135 ASP C O doub N N 136 ASP C OXT sing N N 137 ASP CB CG sing N N 138 ASP CB HB2 sing N N 139 ASP CB HB3 sing N N 140 ASP CG OD1 doub N N 141 ASP CG OD2 sing N N 142 ASP OD2 HD2 sing N N 143 ASP OXT HXT sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 GLN N CA sing N N 158 GLN N H sing N N 159 GLN N H2 sing N N 160 GLN CA C sing N N 161 GLN CA CB sing N N 162 GLN CA HA sing N N 163 GLN C O doub N N 164 GLN C OXT sing N N 165 GLN CB CG sing N N 166 GLN CB HB2 sing N N 167 GLN CB HB3 sing N N 168 GLN CG CD sing N N 169 GLN CG HG2 sing N N 170 GLN CG HG3 sing N N 171 GLN CD OE1 doub N N 172 GLN CD NE2 sing N N 173 GLN NE2 HE21 sing N N 174 GLN NE2 HE22 sing N N 175 GLN OXT HXT sing N N 176 GLU N CA sing N N 177 GLU N H sing N N 178 GLU N H2 sing N N 179 GLU CA C sing N N 180 GLU CA CB sing N N 181 GLU CA HA sing N N 182 GLU C O doub N N 183 GLU C OXT sing N N 184 GLU CB CG sing N N 185 GLU CB HB2 sing N N 186 GLU CB HB3 sing N N 187 GLU CG CD sing N N 188 GLU CG HG2 sing N N 189 GLU CG HG3 sing N N 190 GLU CD OE1 doub N N 191 GLU CD OE2 sing N N 192 GLU OE2 HE2 sing N N 193 GLU OXT HXT sing N N 194 GLY N CA sing N N 195 GLY N H sing N N 196 GLY N H2 sing N N 197 GLY CA C sing N N 198 GLY CA HA2 sing N N 199 GLY CA HA3 sing N N 200 GLY C O doub N N 201 GLY C OXT sing N N 202 GLY OXT HXT sing N N 203 HIS N CA sing N N 204 HIS N H sing N N 205 HIS N H2 sing N N 206 HIS CA C sing N N 207 HIS CA CB sing N N 208 HIS CA HA sing N N 209 HIS C O doub N N 210 HIS C OXT sing N N 211 HIS CB CG sing N N 212 HIS CB HB2 sing N N 213 HIS CB HB3 sing N N 214 HIS CG ND1 sing Y N 215 HIS CG CD2 doub Y N 216 HIS ND1 CE1 doub Y N 217 HIS ND1 HD1 sing N N 218 HIS CD2 NE2 sing Y N 219 HIS CD2 HD2 sing N N 220 HIS CE1 NE2 sing Y N 221 HIS CE1 HE1 sing N N 222 HIS NE2 HE2 sing N N 223 HIS OXT HXT sing N N 224 HOH O H1 sing N N 225 HOH O H2 sing N N 226 ILE N CA sing N N 227 ILE N H sing N N 228 ILE N H2 sing N N 229 ILE CA C sing N N 230 ILE CA CB sing N N 231 ILE CA HA sing N N 232 ILE C O doub N N 233 ILE C OXT sing N N 234 ILE CB CG1 sing N N 235 ILE CB CG2 sing N N 236 ILE CB HB sing N N 237 ILE CG1 CD1 sing N N 238 ILE CG1 HG12 sing N N 239 ILE CG1 HG13 sing N N 240 ILE CG2 HG21 sing N N 241 ILE CG2 HG22 sing N N 242 ILE CG2 HG23 sing N N 243 ILE CD1 HD11 sing N N 244 ILE CD1 HD12 sing N N 245 ILE CD1 HD13 sing N N 246 ILE OXT HXT sing N N 247 LEU N CA sing N N 248 LEU N H sing N N 249 LEU N H2 sing N N 250 LEU CA C sing N N 251 LEU CA CB sing N N 252 LEU CA HA sing N N 253 LEU C O doub N N 254 LEU C OXT sing N N 255 LEU CB CG sing N N 256 LEU CB HB2 sing N N 257 LEU CB HB3 sing N N 258 LEU CG CD1 sing N N 259 LEU CG CD2 sing N N 260 LEU CG HG sing N N 261 LEU CD1 HD11 sing N N 262 LEU CD1 HD12 sing N N 263 LEU CD1 HD13 sing N N 264 LEU CD2 HD21 sing N N 265 LEU CD2 HD22 sing N N 266 LEU CD2 HD23 sing N N 267 LEU OXT HXT sing N N 268 LYS N CA sing N N 269 LYS N H sing N N 270 LYS N H2 sing N N 271 LYS CA C sing N N 272 LYS CA CB sing N N 273 LYS CA HA sing N N 274 LYS C O doub N N 275 LYS C OXT sing N N 276 LYS CB CG sing N N 277 LYS CB HB2 sing N N 278 LYS CB HB3 sing N N 279 LYS CG CD sing N N 280 LYS CG HG2 sing N N 281 LYS CG HG3 sing N N 282 LYS CD CE sing N N 283 LYS CD HD2 sing N N 284 LYS CD HD3 sing N N 285 LYS CE NZ sing N N 286 LYS CE HE2 sing N N 287 LYS CE HE3 sing N N 288 LYS NZ HZ1 sing N N 289 LYS NZ HZ2 sing N N 290 LYS NZ HZ3 sing N N 291 LYS OXT HXT sing N N 292 MET N CA sing N N 293 MET N H sing N N 294 MET N H2 sing N N 295 MET CA C sing N N 296 MET CA CB sing N N 297 MET CA HA sing N N 298 MET C O doub N N 299 MET C OXT sing N N 300 MET CB CG sing N N 301 MET CB HB2 sing N N 302 MET CB HB3 sing N N 303 MET CG SD sing N N 304 MET CG HG2 sing N N 305 MET CG HG3 sing N N 306 MET SD CE sing N N 307 MET CE HE1 sing N N 308 MET CE HE2 sing N N 309 MET CE HE3 sing N N 310 MET OXT HXT sing N N 311 PHE N CA sing N N 312 PHE N H sing N N 313 PHE N H2 sing N N 314 PHE CA C sing N N 315 PHE CA CB sing N N 316 PHE CA HA sing N N 317 PHE C O doub N N 318 PHE C OXT sing N N 319 PHE CB CG sing N N 320 PHE CB HB2 sing N N 321 PHE CB HB3 sing N N 322 PHE CG CD1 doub Y N 323 PHE CG CD2 sing Y N 324 PHE CD1 CE1 sing Y N 325 PHE CD1 HD1 sing N N 326 PHE CD2 CE2 doub Y N 327 PHE CD2 HD2 sing N N 328 PHE CE1 CZ doub Y N 329 PHE CE1 HE1 sing N N 330 PHE CE2 CZ sing Y N 331 PHE CE2 HE2 sing N N 332 PHE CZ HZ sing N N 333 PHE OXT HXT sing N N 334 PRO N CA sing N N 335 PRO N CD sing N N 336 PRO N H sing N N 337 PRO CA C sing N N 338 PRO CA CB sing N N 339 PRO CA HA sing N N 340 PRO C O doub N N 341 PRO C OXT sing N N 342 PRO CB CG sing N N 343 PRO CB HB2 sing N N 344 PRO CB HB3 sing N N 345 PRO CG CD sing N N 346 PRO CG HG2 sing N N 347 PRO CG HG3 sing N N 348 PRO CD HD2 sing N N 349 PRO CD HD3 sing N N 350 PRO OXT HXT sing N N 351 SER N CA sing N N 352 SER N H sing N N 353 SER N H2 sing N N 354 SER CA C sing N N 355 SER CA CB sing N N 356 SER CA HA sing N N 357 SER C O doub N N 358 SER C OXT sing N N 359 SER CB OG sing N N 360 SER CB HB2 sing N N 361 SER CB HB3 sing N N 362 SER OG HG sing N N 363 SER OXT HXT sing N N 364 SO4 S O1 doub N N 365 SO4 S O2 doub N N 366 SO4 S O3 sing N N 367 SO4 S O4 sing N N 368 THR N CA sing N N 369 THR N H sing N N 370 THR N H2 sing N N 371 THR CA C sing N N 372 THR CA CB sing N N 373 THR CA HA sing N N 374 THR C O doub N N 375 THR C OXT sing N N 376 THR CB OG1 sing N N 377 THR CB CG2 sing N N 378 THR CB HB sing N N 379 THR OG1 HG1 sing N N 380 THR CG2 HG21 sing N N 381 THR CG2 HG22 sing N N 382 THR CG2 HG23 sing N N 383 THR OXT HXT sing N N 384 TRP N CA sing N N 385 TRP N H sing N N 386 TRP N H2 sing N N 387 TRP CA C sing N N 388 TRP CA CB sing N N 389 TRP CA HA sing N N 390 TRP C O doub N N 391 TRP C OXT sing N N 392 TRP CB CG sing N N 393 TRP CB HB2 sing N N 394 TRP CB HB3 sing N N 395 TRP CG CD1 doub Y N 396 TRP CG CD2 sing Y N 397 TRP CD1 NE1 sing Y N 398 TRP CD1 HD1 sing N N 399 TRP CD2 CE2 doub Y N 400 TRP CD2 CE3 sing Y N 401 TRP NE1 CE2 sing Y N 402 TRP NE1 HE1 sing N N 403 TRP CE2 CZ2 sing Y N 404 TRP CE3 CZ3 doub Y N 405 TRP CE3 HE3 sing N N 406 TRP CZ2 CH2 doub Y N 407 TRP CZ2 HZ2 sing N N 408 TRP CZ3 CH2 sing Y N 409 TRP CZ3 HZ3 sing N N 410 TRP CH2 HH2 sing N N 411 TRP OXT HXT sing N N 412 TYR N CA sing N N 413 TYR N H sing N N 414 TYR N H2 sing N N 415 TYR CA C sing N N 416 TYR CA CB sing N N 417 TYR CA HA sing N N 418 TYR C O doub N N 419 TYR C OXT sing N N 420 TYR CB CG sing N N 421 TYR CB HB2 sing N N 422 TYR CB HB3 sing N N 423 TYR CG CD1 doub Y N 424 TYR CG CD2 sing Y N 425 TYR CD1 CE1 sing Y N 426 TYR CD1 HD1 sing N N 427 TYR CD2 CE2 doub Y N 428 TYR CD2 HD2 sing N N 429 TYR CE1 CZ doub Y N 430 TYR CE1 HE1 sing N N 431 TYR CE2 CZ sing Y N 432 TYR CE2 HE2 sing N N 433 TYR CZ OH sing N N 434 TYR OH HH sing N N 435 TYR OXT HXT sing N N 436 VAL N CA sing N N 437 VAL N H sing N N 438 VAL N H2 sing N N 439 VAL CA C sing N N 440 VAL CA CB sing N N 441 VAL CA HA sing N N 442 VAL C O doub N N 443 VAL C OXT sing N N 444 VAL CB CG1 sing N N 445 VAL CB CG2 sing N N 446 VAL CB HB sing N N 447 VAL CG1 HG11 sing N N 448 VAL CG1 HG12 sing N N 449 VAL CG1 HG13 sing N N 450 VAL CG2 HG21 sing N N 451 VAL CG2 HG22 sing N N 452 VAL CG2 HG23 sing N N 453 VAL OXT HXT sing N N 454 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1Q6K _pdbx_initial_refinement_model.details 'PDB ENTRY 1Q6K' # _atom_sites.entry_id 1YT7 _atom_sites.fract_transf_matrix[1][1] 0.015233 _atom_sites.fract_transf_matrix[1][2] 0.008795 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017590 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029013 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O S # loop_