HEADER HYDROLASE 07-APR-95 1YTS TITLE A LIGAND-INDUCED CONFORMATIONAL CHANGE IN THE YERSINIA PROTEIN TITLE 2 TYROSINE PHOSPHATASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: YERSINIA PROTEIN TYROSINE PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.3.48; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA ENTEROCOLITICA; SOURCE 3 ORGANISM_TAXID: 630; SOURCE 4 STRAIN: W22703; SOURCE 5 GENE: YOP51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT7-7; SOURCE 10 EXPRESSION_SYSTEM_GENE: YOP51 KEYWDS PROTEIN TYROSINE PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.L.SCHUBERT,J.A.STUCKEY,E.B.FAUMAN,J.E.DIXON,M.A.SAPER REVDAT 3 14-FEB-24 1YTS 1 REMARK SEQADV REVDAT 2 24-FEB-09 1YTS 1 VERSN REVDAT 1 10-JUL-95 1YTS 0 JRNL AUTH H.L.SCHUBERT,E.B.FAUMAN,J.A.STUCKEY,J.E.DIXON,M.A.SAPER JRNL TITL A LIGAND-INDUCED CONFORMATIONAL CHANGE IN THE YERSINIA JRNL TITL 2 PROTEIN TYROSINE PHOSPHATASE. JRNL REF PROTEIN SCI. V. 4 1904 1995 JRNL REFN ISSN 0961-8368 JRNL PMID 8528087 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.-Y.ZHANG,Y.WANG,J.E.DIXON REMARK 1 TITL DISSECTING THE CATALYTIC MECHANISM OF PROTEIN-TYROSINE REMARK 1 TITL 2 PHOSPHATASES REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 91 1624 1994 REMARK 1 REFN ISSN 0027-8424 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.A.STUCKEY,H.L.SCHUBERT,E.B.FAUMAN,Z.-Y.ZHANG,J.E.DIXON, REMARK 1 AUTH 2 M.A.SAPER REMARK 1 TITL CRYSTAL STRUCTURE OF YERSINIA PROTEIN TYROSINE PHOSPHATASE REMARK 1 TITL 2 AT 2.5 ANGSTROMS AND THE COMPLEX WITH TUNGSTATE REMARK 1 REF NATURE V. 370 571 1994 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 3 REMARK 1 AUTH Z.-Y.ZHANG,J.C.CLEMENS,H.L.SCHUBERT,J.A.STUCKEY, REMARK 1 AUTH 2 M.W.F.FISCHER,D.M.HUME,M.A.SAPER,J.E.DIXON REMARK 1 TITL EXPRESSION, PURIFICATION, AND PHYSICOCHEMICAL REMARK 1 TITL 2 CHARACTERIZATION OF A RECOMBINANT YERSINIA PROTEIN TYROSINE REMARK 1 TITL 3 PHOSPHATASE REMARK 1 REF J.BIOL.CHEM. V. 267 23759 1992 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 9156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2137 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 3.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YTS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177440. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-92 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SDMS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9156 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 2.490 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOLECULE: YERSINIA PROTEIN TYROSINE REMARK 280 PHOSPHATASE CYS(403)SER COMPLEXED WITH SULFATE. THE CATALYTIC REMARK 280 DOMAIN (RESIDUES 163 - 468) OF YOP51 WAS CRYSTALLIZED AT 23 REMARK 280 DEGREES CELSIUS, IN A SOLUTION OF 18 - 24% POLYETHYLENE GLYCOL REMARK 280 (MW 4000), 5% 2-METHYL-2,4-PENTANEDIOL, 0.1% BETA- REMARK 280 MERCAPTOETHANOL, 200MM LI2SO4, 0.1M TRIS-HCL, PH 8.5, REMARK 280 TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.20000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.20000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.20000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.20000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 350 NE2 HIS A 350 CD2 -0.085 REMARK 500 HIS A 402 NE2 HIS A 402 CD2 -0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 200 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 205 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ASN A 213 CA - CB - CG ANGL. DEV. = -15.2 DEGREES REMARK 500 CYS A 221 CA - C - N ANGL. DEV. = -14.2 DEGREES REMARK 500 ARG A 228 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLN A 233 CA - CB - CG ANGL. DEV. = -15.0 DEGREES REMARK 500 CYS A 234 CA - CB - SG ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG A 235 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 236 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 241 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG A 255 NE - CZ - NH2 ANGL. DEV. = 6.4 DEGREES REMARK 500 THR A 256 CA - CB - CG2 ANGL. DEV. = 8.6 DEGREES REMARK 500 SER A 265 CA - CB - OG ANGL. DEV. = 17.7 DEGREES REMARK 500 ARG A 272 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 278 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 295 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 MET A 331 CA - CB - CG ANGL. DEV. = -16.5 DEGREES REMARK 500 MET A 331 CG - SD - CE ANGL. DEV. = -19.8 DEGREES REMARK 500 TYR A 332 CB - CG - CD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 337 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 TRP A 354 CE2 - CD2 - CG ANGL. DEV. = -5.1 DEGREES REMARK 500 TRP A 354 CG - CD2 - CE3 ANGL. DEV. = 6.6 DEGREES REMARK 500 PRO A 355 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG A 380 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 380 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 TYR A 383 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 VAL A 391 CG1 - CB - CG2 ANGL. DEV. = -9.9 DEGREES REMARK 500 ARG A 423 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP A 431 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 VAL A 433 CG1 - CB - CG2 ANGL. DEV. = -9.9 DEGREES REMARK 500 ARG A 440 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 463 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 235 121.50 -38.09 REMARK 500 THR A 318 -77.46 -111.57 REMARK 500 ASP A 325 18.09 56.86 REMARK 500 ASN A 353 42.83 -140.44 REMARK 500 PRO A 399 125.50 -34.53 REMARK 500 SER A 403 -112.83 -125.01 REMARK 500 MET A 419 3.75 -67.61 REMARK 500 ASN A 424 55.98 -113.02 REMARK 500 GLN A 426 -0.31 68.64 REMARK 500 ARG A 440 -67.94 -136.86 REMARK 500 VAL A 445 78.36 57.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: PL REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: THE PHOSPHATE BINDING LOOP WHICH IS BELIEVED TO REMARK 800 BE STRUCTURALLY CONSERVED IN ALL PROTEIN TYROSINE PHOSPHATASES REMARK 800 REMARK 800 SITE_IDENTIFIER: WPD REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: THE FLEXIBLE LOOP CONTAINING THE PUTATIVE REMARK 800 GENERAL ACID, ASP 356, THAT FOLDS OVER THE SULFATE ANION IN THE REMARK 800 SULFATE-BOUND STRUCTURE. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 999 REMARK 999 SEQUENCE REMARK 999 YERSINIA PROTEIN TYROSINE PHOSPHATASE. REMARK 999 ONLY THE CATALYTIC DOMAIN (RESIDUES 163 - 468) WAS REMARK 999 CRYSTALLIZED. THE 235 CYS TO ARG MUTATION WAS REMARK 999 UNINTENTIONAL AND MOST LIKELY THE RESULT OF USING PCR TO REMARK 999 CONSTRUCT THE PLASMID. THE REMARK 999 403 CYS TO SER MUTATION ELIMINATES ALL PTPASE CATALYTIC REMARK 999 ACTIVITY. DBREF 1YTS A 191 468 UNP P15273 YOPH_YEREN 191 468 SEQADV 1YTS ARG A 235 UNP P15273 CYS 235 CONFLICT SEQADV 1YTS SER A 403 UNP P15273 CYS 403 CONFLICT SEQRES 1 A 278 PRO GLU ALA ARG ALA GLU LEU SER SER ARG LEU THR THR SEQRES 2 A 278 LEU ARG ASN THR LEU ALA PRO ALA THR ASN ASP PRO ARG SEQRES 3 A 278 TYR LEU GLN ALA CYS GLY GLY GLU LYS LEU ASN ARG PHE SEQRES 4 A 278 ARG ASP ILE GLN CYS ARG ARG GLN THR ALA VAL ARG ALA SEQRES 5 A 278 ASP LEU ASN ALA ASN TYR ILE GLN VAL GLY ASN THR ARG SEQRES 6 A 278 THR ILE ALA CYS GLN TYR PRO LEU GLN SER GLN LEU GLU SEQRES 7 A 278 SER HIS PHE ARG MET LEU ALA GLU ASN ARG THR PRO VAL SEQRES 8 A 278 LEU ALA VAL LEU ALA SER SER SER GLU ILE ALA ASN GLN SEQRES 9 A 278 ARG PHE GLY MET PRO ASP TYR PHE ARG GLN SER GLY THR SEQRES 10 A 278 TYR GLY SER ILE THR VAL GLU SER LYS MET THR GLN GLN SEQRES 11 A 278 VAL GLY LEU GLY ASP GLY ILE MET ALA ASP MET TYR THR SEQRES 12 A 278 LEU THR ILE ARG GLU ALA GLY GLN LYS THR ILE SER VAL SEQRES 13 A 278 PRO VAL VAL HIS VAL GLY ASN TRP PRO ASP GLN THR ALA SEQRES 14 A 278 VAL SER SER GLU VAL THR LYS ALA LEU ALA SER LEU VAL SEQRES 15 A 278 ASP GLN THR ALA GLU THR LYS ARG ASN MET TYR GLU SER SEQRES 16 A 278 LYS GLY SER SER ALA VAL ALA ASP ASP SER LYS LEU ARG SEQRES 17 A 278 PRO VAL ILE HIS SER ARG ALA GLY VAL GLY ARG THR ALA SEQRES 18 A 278 GLN LEU ILE GLY ALA MET CYS MET ASN ASP SER ARG ASN SEQRES 19 A 278 SER GLN LEU SER VAL GLU ASP MET VAL SER GLN MET ARG SEQRES 20 A 278 VAL GLN ARG ASN GLY ILE MET VAL GLN LYS ASP GLU GLN SEQRES 21 A 278 LEU ASP VAL LEU ILE LYS LEU ALA GLU GLY GLN GLY ARG SEQRES 22 A 278 PRO LEU LEU ASN SER HET SO4 A 1 5 HET SO4 A 2 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *60(H2 O) HELIX 1 1 GLU A 192 THR A 207 1 16 HELIX 2 2 ARG A 236 THR A 238 5 3 HELIX 3 3 GLN A 264 GLU A 276 5 13 HELIX 4 4 SER A 288 ALA A 292 1 5 HELIX 5 5 GLN A 294 PHE A 296 5 3 HELIX 6 6 SER A 362 LYS A 386 1 25 HELIX 7 7 ALA A 390 ALA A 392 5 3 HELIX 8 8 ARG A 409 ASN A 420 1 12 HELIX 9 9 VAL A 429 GLN A 439 1 11 HELIX 10 10 ASP A 448 GLN A 461 1 14 SHEET 1 A 8 ALA A 246 VAL A 251 0 SHEET 2 A 8 THR A 254 CYS A 259 -1 N ALA A 258 O ASN A 247 SHEET 3 A 8 PRO A 399 HIS A 402 1 N PRO A 399 O ILE A 257 SHEET 4 A 8 LEU A 282 VAL A 284 1 N ALA A 283 O VAL A 400 SHEET 5 A 8 ILE A 344 VAL A 351 1 N VAL A 349 O LEU A 282 SHEET 6 A 8 ALA A 329 GLU A 338 -1 N ILE A 336 O ILE A 344 SHEET 7 A 8 ILE A 311 MET A 317 -1 N LYS A 316 O THR A 333 SHEET 8 A 8 GLY A 306 TYR A 308 -1 N TYR A 308 O ILE A 311 SHEET 1 B 2 GLN A 320 GLY A 324 0 SHEET 2 B 2 ILE A 327 ASP A 330 -1 N ALA A 329 O VAL A 321 SITE 1 PL 9 HIS A 402 SER A 403 ARG A 404 ALA A 405 SITE 2 PL 9 GLY A 406 VAL A 407 GLY A 408 ARG A 409 SITE 3 PL 9 THR A 410 SITE 1 WPD 11 HIS A 350 VAL A 351 GLY A 352 ASN A 353 SITE 2 WPD 11 TRP A 354 PRO A 355 ASP A 356 GLN A 357 SITE 3 WPD 11 THR A 358 ALA A 359 VAL A 360 SITE 1 AC1 9 ASP A 356 SER A 403 ARG A 404 ALA A 405 SITE 2 AC1 9 GLY A 406 VAL A 407 GLY A 408 ARG A 409 SITE 3 AC1 9 HOH A 522 SITE 1 AC2 4 ARG A 278 SER A 388 SER A 389 ALA A 390 CRYST1 56.400 49.800 100.400 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017730 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020080 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009960 0.00000