HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-FEB-05 1YW1 TITLE STRUCTURE OF YTNJ FROM BACILLUS SUBTILIS IN COMPLEX WITH FMN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN YTNJ; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NITRILOTRIACETATE MONOOXYGENASE COMPONENT A HOMOLOG YTNJ; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: YTNJ; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET28B KEYWDS NYSGXRC, BETA-ALPHA BARREL, FMN, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (NYSGXRC) REVDAT 5 03-FEB-21 1YW1 1 AUTHOR HETSYN REVDAT 4 29-JUL-20 1YW1 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE REVDAT 3 13-JUL-11 1YW1 1 VERSN REVDAT 2 24-FEB-09 1YW1 1 VERSN REVDAT 1 01-MAR-05 1YW1 0 JRNL AUTH J.GORMAN,L.SHAPIRO JRNL TITL STRUCTURE OF YTNJ FROM BACILLUS SUBTILIS IN COMPLEX WITH FMN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 17329 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 899 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1208 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.4150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3095 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 69 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.86000 REMARK 3 B22 (A**2) : 2.86000 REMARK 3 B33 (A**2) : -5.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.503 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.327 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.206 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.182 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3213 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2856 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4352 ; 1.926 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6634 ; 0.829 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 391 ; 7.461 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;35.300 ;23.631 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 522 ;20.160 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.264 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 468 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3589 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 685 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 794 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3048 ; 0.216 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1616 ; 0.199 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1861 ; 0.103 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 106 ; 0.169 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.040 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.113 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 84 ; 0.283 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.126 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2231 ; 1.465 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 802 ; 0.259 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3130 ; 2.066 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1391 ; 3.378 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1222 ; 5.261 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1YW1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031983. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .979 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17468 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 5.570 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M NACITRATE, 0.1M HEPES PH 7.5, REMARK 280 SOAKED IN .01M FMN, CRYO: 30% GLUCOSE, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.32000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.12700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.12700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 145.98000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.12700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.12700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 48.66000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.12700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.12700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 145.98000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.12700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.12700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.66000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 97.32000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE DIMERIC BIOLOGICAL ASSEMBLY IS REMARK 300 GENERATED BY Y-1, X+1, -Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 8500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -86.25400 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 86.25400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 PHE A 305 REMARK 465 PHE A 306 REMARK 465 ASP A 307 REMARK 465 ASP A 308 REMARK 465 TYR A 309 REMARK 465 ASP A 310 REMARK 465 LEU A 311 REMARK 465 SER A 312 REMARK 465 VAL A 313 REMARK 465 TYR A 314 REMARK 465 PRO A 315 REMARK 465 LEU A 316 REMARK 465 ASP A 317 REMARK 465 GLU A 318 REMARK 465 PRO A 319 REMARK 465 PHE A 320 REMARK 465 PRO A 321 REMARK 465 ASP A 322 REMARK 465 ILE A 323 REMARK 465 GLY A 324 REMARK 465 ASP A 325 REMARK 465 VAL A 326 REMARK 465 GLY A 327 REMARK 465 LYS A 328 REMARK 465 ASN A 329 REMARK 465 ALA A 330 REMARK 465 PHE A 331 REMARK 465 GLN A 332 REMARK 465 SER A 333 REMARK 465 THR A 334 REMARK 465 THR A 335 REMARK 465 ASP A 336 REMARK 465 ARG A 337 REMARK 465 ILE A 338 REMARK 465 LYS A 339 REMARK 465 ARG A 340 REMARK 465 GLN A 432 REMARK 465 HIS A 433 REMARK 465 GLN A 434 REMARK 465 SER A 435 REMARK 465 VAL A 436 REMARK 465 LEU A 437 REMARK 465 HIS A 438 REMARK 465 SER A 439 REMARK 465 SER A 440 REMARK 465 HIS A 441 REMARK 465 HIS A 442 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 188 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP A 232 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 128 118.31 83.02 REMARK 500 GLN A 130 107.73 -53.40 REMARK 500 ASN A 203 40.23 -93.94 REMARK 500 SER A 220 174.31 -59.62 REMARK 500 ALA A 303 69.09 -48.46 REMARK 500 LYS A 343 34.42 -140.56 REMARK 500 ALA A 344 88.92 -56.00 REMARK 500 PHE A 358 79.13 -150.25 REMARK 500 PHE A 363 44.73 -89.84 REMARK 500 SER A 390 49.66 -147.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TVL RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT FMN REMARK 900 RELATED ID: NYSGXRC-T773 RELATED DB: TARGETDB DBREF 1YW1 A 1 442 UNP O34974 O34974_BACSU 1 442 SEQADV 1YW1 MSE A 1 UNP O34974 MET 1 MODIFIED RESIDUE SEQADV 1YW1 MSE A 12 UNP O34974 MET 12 MODIFIED RESIDUE SEQADV 1YW1 MSE A 40 UNP O34974 MET 40 MODIFIED RESIDUE SEQADV 1YW1 MSE A 111 UNP O34974 MET 111 MODIFIED RESIDUE SEQADV 1YW1 MSE A 356 UNP O34974 MET 356 MODIFIED RESIDUE SEQRES 1 A 442 MSE THR ARG ALA ASP PHE ILE GLN PHE GLY ALA MSE ILE SEQRES 2 A 442 HIS GLY VAL GLY GLY THR THR ASP GLY TRP ARG HIS PRO SEQRES 3 A 442 ASP VAL ASP PRO SER ALA SER THR ASN ILE GLU PHE TYR SEQRES 4 A 442 MSE LYS LYS ALA GLN THR ALA GLU LYS GLY LEU PHE SER SEQRES 5 A 442 PHE ILE PHE ILE ALA ASP GLY LEU PHE ILE SER GLU LYS SEQRES 6 A 442 SER ILE PRO HIS PHE LEU ASN ARG PHE GLU PRO ILE THR SEQRES 7 A 442 ILE LEU SER ALA LEU ALA SER VAL THR LYS ASN ILE GLY SEQRES 8 A 442 LEU VAL GLY THR PHE SER THR SER PHE THR GLU PRO PHE SEQRES 9 A 442 THR ILE SER ARG GLN LEU MSE SER LEU ASP HIS ILE SER SEQRES 10 A 442 GLY GLY ARG ALA GLY TRP ASN LEU VAL THR SER PRO GLN SEQRES 11 A 442 GLU GLY ALA ALA ARG ASN HIS SER LYS SER ASN LEU PRO SEQRES 12 A 442 GLU HIS THR GLU ARG TYR GLU ILE ALA GLN GLU HIS LEU SEQRES 13 A 442 ASP VAL VAL ARG GLY LEU TRP ASN SER TRP GLU HIS ASP SEQRES 14 A 442 ALA PHE ILE HIS ASN LYS LYS THR GLY GLN PHE PHE ASP SEQRES 15 A 442 GLN ALA LYS LEU HIS ARG LEU ASN HIS LYS GLY LYS TYR SEQRES 16 A 442 PHE GLN VAL GLU GLY PRO LEU ASN ILE GLY ARG SER LYS SEQRES 17 A 442 GLN GLY GLU PRO VAL VAL PHE GLN ALA GLY SER SER GLU SEQRES 18 A 442 THR GLY ARG GLN PHE ALA ALA LYS ASN ALA ASP ALA ILE SEQRES 19 A 442 PHE THR HIS SER ASN SER LEU GLU GLU THR LYS ALA PHE SEQRES 20 A 442 TYR ALA ASP VAL LYS SER ARG ALA ALA ASP GLU GLY ARG SEQRES 21 A 442 ASP PRO SER SER VAL ARG ILE PHE PRO GLY ILE SER PRO SEQRES 22 A 442 ILE VAL ALA ASP THR GLU GLU GLU ALA GLU LYS LYS TYR SEQRES 23 A 442 ARG GLU PHE ALA GLU LEU ILE PRO ILE GLU ASN ALA VAL SEQRES 24 A 442 THR TYR LEU ALA ARG PHE PHE ASP ASP TYR ASP LEU SER SEQRES 25 A 442 VAL TYR PRO LEU ASP GLU PRO PHE PRO ASP ILE GLY ASP SEQRES 26 A 442 VAL GLY LYS ASN ALA PHE GLN SER THR THR ASP ARG ILE SEQRES 27 A 442 LYS ARG GLU ALA LYS ALA ARG ASN LEU THR LEU ARG GLU SEQRES 28 A 442 VAL ALA GLN GLU MSE ALA PHE PRO ARG THR LEU PHE ILE SEQRES 29 A 442 GLY THR PRO GLU ARG VAL ALA SER LEU ILE GLU THR TRP SEQRES 30 A 442 PHE ASN ALA GLU ALA ALA ASP GLY PHE ILE VAL GLY SER SEQRES 31 A 442 ASP ILE PRO GLY THR LEU ASP ALA PHE VAL GLU LYS VAL SEQRES 32 A 442 ILE PRO ILE LEU GLN GLU ARG GLY LEU TYR ARG GLN ASP SEQRES 33 A 442 TYR ARG GLY GLY THR LEU ARG GLU ASN LEU GLY LEU GLY SEQRES 34 A 442 ILE PRO GLN HIS GLN SER VAL LEU HIS SER SER HIS HIS MODRES 1YW1 MSE A 12 MET SELENOMETHIONINE MODRES 1YW1 MSE A 40 MET SELENOMETHIONINE MODRES 1YW1 MSE A 111 MET SELENOMETHIONINE MODRES 1YW1 MSE A 356 MET SELENOMETHIONINE HET MSE A 12 8 HET MSE A 40 8 HET MSE A 111 8 HET MSE A 356 8 HET GLC A2605 12 HET FMN A2606 31 HETNAM MSE SELENOMETHIONINE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 GLC C6 H12 O6 FORMUL 3 FMN C17 H21 N4 O9 P FORMUL 4 HOH *69(H2 O) HELIX 1 1 ASP A 21 HIS A 25 5 5 HELIX 2 2 SER A 31 THR A 34 5 4 HELIX 3 3 ASN A 35 GLY A 49 1 15 HELIX 4 4 ILE A 67 ASN A 72 1 6 HELIX 5 5 GLU A 75 SER A 85 1 11 HELIX 6 6 GLU A 102 SER A 117 1 16 HELIX 7 7 GLN A 130 ARG A 135 1 6 HELIX 8 8 GLU A 144 ASN A 164 1 21 HELIX 9 9 ASP A 182 LEU A 186 5 5 HELIX 10 10 SER A 220 ALA A 231 1 12 HELIX 11 11 SER A 240 ASP A 257 1 18 HELIX 12 12 ASP A 261 VAL A 265 5 5 HELIX 13 13 THR A 278 GLU A 291 1 14 HELIX 14 14 PRO A 294 ALA A 303 1 10 HELIX 15 15 THR A 348 PHE A 358 1 11 HELIX 16 16 THR A 366 ALA A 380 1 15 HELIX 17 17 GLY A 394 ARG A 410 1 17 HELIX 18 18 THR A 421 GLY A 427 1 7 SHEET 1 A 9 GLN A 8 MSE A 12 0 SHEET 2 A 9 PHE A 53 ILE A 56 1 O PHE A 55 N ALA A 11 SHEET 3 A 9 GLY A 91 SER A 97 1 O VAL A 93 N ILE A 54 SHEET 4 A 9 ALA A 121 VAL A 126 1 O ASN A 124 N GLY A 94 SHEET 5 A 9 VAL A 213 GLN A 216 1 O PHE A 215 N TRP A 123 SHEET 6 A 9 ALA A 233 THR A 236 1 N ALA A 233 O VAL A 214 SHEET 7 A 9 ARG A 266 ILE A 271 1 O PHE A 268 N ILE A 234 SHEET 8 A 9 GLY A 385 VAL A 388 1 O ILE A 387 N ILE A 271 SHEET 9 A 9 GLN A 8 MSE A 12 1 N GLY A 10 O VAL A 388 SHEET 1 B 2 HIS A 191 LYS A 192 0 SHEET 2 B 2 GLN A 197 VAL A 198 -1 O VAL A 198 N HIS A 191 SHEET 1 C 2 ILE A 274 VAL A 275 0 SHEET 2 C 2 ILE A 364 GLY A 365 1 O GLY A 365 N ILE A 274 LINK C ALA A 11 N MSE A 12 1555 1555 1.32 LINK C MSE A 12 N ILE A 13 1555 1555 1.33 LINK C TYR A 39 N MSE A 40 1555 1555 1.32 LINK C MSE A 40 N LYS A 41 1555 1555 1.33 LINK C LEU A 110 N MSE A 111 1555 1555 1.32 LINK C MSE A 111 N SER A 112 1555 1555 1.33 LINK C GLU A 355 N MSE A 356 1555 1555 1.33 LINK C MSE A 356 N ALA A 357 1555 1555 1.33 CISPEP 1 GLY A 200 PRO A 201 0 -0.33 CRYST1 86.254 86.254 194.640 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011594 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005138 0.00000