HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 18-FEB-05 1YWL TITLE SOLUTION NMR STRUCTURE OF THE PROTEIN EF2693 FROM E. FAECALIS: TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET EFR36 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL UPF0213 PROTEIN EF2693; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 GENE: EF2693; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS ALPHA AND BETA, STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM (NESG), PROTEIN STRUCTURE INITIATIVE (PSI), UNKNOWN KEYWDS 3 FUNCTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 22-MAY-24 1YWL 1 REMARK REVDAT 3 02-MAR-22 1YWL 1 REMARK SEQADV REVDAT 2 24-FEB-09 1YWL 1 VERSN REVDAT 1 29-MAR-05 1YWL 0 JRNL AUTH G.V.T.SWAPNA,A.BHATTACHARYA,J.M.ARAMINI,T.B.ACTON,L.MA, JRNL AUTH 2 R.XIAO,R.SHASTRY,L.SHIH,K.E.CUNNINGHAM,G.T.MONTELIONE JRNL TITL SOLUTION NMR STRUCTURE OF THE PROTEIN EF2693 FROM E. JRNL TITL 2 FAECALIS: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET JRNL TITL 3 EFR36 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5, PSVS 1.0 REMARK 3 AUTHORS : GUENTERT, ET AL (DYANA), BHATTACHARYA (PSVS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 912 CONFORMATIONALLY-RESTRICTING NOE-DERIVED DISTANCE RESTRAINTS, REMARK 3 216 DIHEDRAL RESTRAINTS AND 54 HYDROGEN BOND RESTRAINTS. REMARK 4 REMARK 4 1YWL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032003. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 MM NACL, 5 MM CACL2 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 5% D2O, 0.02% NAN3, 10MM DTT, REMARK 210 5MM CACL2, 100MM NACL, 20MM MES, REMARK 210 5 % D20, 95 % H20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AUTOSTRUCTURE 2.0.0, AUTOASSIGN REMARK 210 1.14, NMRPIPE 2.1, VNMR 6.1B, REMARK 210 XWINNMR 3.5, PDBSTAT 4.01, HYPER REMARK 210 3.2, TALOS 2.1, SPINS 5.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 56 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. AUTOMATIC BACKBONE RESONANCE ASSIGNMENTS WERE MADE REMARK 210 USING AUTOASSIGN. SIDE-CHAIN ASSIGNMENTS WERE MADE MANUALLY. REMARK 210 AUTOMATIC NOE ASSIGNMENTS WERE MADE USING AUTOSTRUCTURE. REMARK 210 DIHEDRAL ANGLE RESTRAINTS WERE MADE USING HYPER AND TALOS. THE REMARK 210 SPINS DATABASE SOFTWARE WAS USED AS AN INTEGRATING AGENT. PSVS REMARK 210 WAS USED TO VALIDATE STRUCTURE QUALITY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 82 H THR A 86 1.51 REMARK 500 O GLN A 79 H TYR A 83 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 2 -175.21 -54.59 REMARK 500 1 ASN A 3 76.21 59.81 REMARK 500 1 LYS A 4 83.57 163.19 REMARK 500 1 LYS A 5 -168.38 45.19 REMARK 500 1 SER A 6 131.18 61.73 REMARK 500 1 GLU A 26 63.73 67.59 REMARK 500 1 LEU A 31 -71.84 -72.01 REMARK 500 1 SER A 36 41.82 -90.94 REMARK 500 1 LYS A 41 -73.77 -120.60 REMARK 500 1 ALA A 46 100.84 63.65 REMARK 500 1 ARG A 49 84.27 53.93 REMARK 500 1 LYS A 78 -75.02 -91.85 REMARK 500 1 TYR A 83 -39.99 -37.32 REMARK 500 1 HIS A 91 88.05 -155.62 REMARK 500 1 HIS A 93 139.42 -176.23 REMARK 500 1 HIS A 94 126.61 62.51 REMARK 500 1 HIS A 95 175.05 57.84 REMARK 500 2 LYS A 5 167.79 56.48 REMARK 500 2 SER A 6 -150.75 80.17 REMARK 500 2 GLU A 26 68.05 73.97 REMARK 500 2 GLU A 33 -73.00 -51.87 REMARK 500 2 THR A 38 -56.79 -157.88 REMARK 500 2 TYR A 42 -68.72 66.39 REMARK 500 2 ARG A 48 169.32 -45.81 REMARK 500 2 ARG A 49 95.82 67.50 REMARK 500 2 ILE A 54 41.86 -152.65 REMARK 500 2 HIS A 55 101.89 174.16 REMARK 500 2 THR A 76 -165.53 -116.69 REMARK 500 2 LYS A 78 -74.31 -90.94 REMARK 500 2 THR A 86 -33.64 -38.86 REMARK 500 3 GLU A 2 -169.29 -58.50 REMARK 500 3 ASN A 3 152.48 67.28 REMARK 500 3 LYS A 4 178.58 85.51 REMARK 500 3 LYS A 5 -176.88 -52.10 REMARK 500 3 SER A 6 138.34 66.51 REMARK 500 3 THR A 38 98.98 60.57 REMARK 500 3 ALA A 40 -59.68 -132.46 REMARK 500 3 THR A 43 119.41 -169.00 REMARK 500 3 ALA A 46 86.17 56.87 REMARK 500 3 ARG A 49 85.46 70.87 REMARK 500 3 ARG A 77 -19.52 -49.93 REMARK 500 3 LYS A 78 -74.09 -98.47 REMARK 500 4 GLU A 2 77.21 -159.31 REMARK 500 4 LYS A 5 152.54 72.86 REMARK 500 4 SER A 6 -168.89 85.75 REMARK 500 4 GLU A 26 74.09 77.95 REMARK 500 4 THR A 38 -87.25 58.89 REMARK 500 4 ALA A 40 153.93 177.77 REMARK 500 4 TYR A 42 -50.21 -138.20 REMARK 500 4 ALA A 46 88.75 -63.50 REMARK 500 REMARK 500 THIS ENTRY HAS 138 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFR36 RELATED DB: TARGETDB DBREF 1YWL A 1 88 UNP Q830S9 Y2693_ENTFA 1 88 SEQADV 1YWL LEU A 89 UNP Q830S9 CLONING ARTIFACT SEQADV 1YWL GLU A 90 UNP Q830S9 CLONING ARTIFACT SEQADV 1YWL HIS A 91 UNP Q830S9 CLONING ARTIFACT SEQADV 1YWL HIS A 92 UNP Q830S9 CLONING ARTIFACT SEQADV 1YWL HIS A 93 UNP Q830S9 CLONING ARTIFACT SEQADV 1YWL HIS A 94 UNP Q830S9 CLONING ARTIFACT SEQADV 1YWL HIS A 95 UNP Q830S9 CLONING ARTIFACT SEQADV 1YWL HIS A 96 UNP Q830S9 CLONING ARTIFACT SEQRES 1 A 96 MET GLU ASN LYS LYS SER HIS TYR PHE TYR VAL LEU LEU SEQRES 2 A 96 CYS GLN ASP GLY SER PHE TYR GLY GLY TYR THR THR GLU SEQRES 3 A 96 PRO GLU ARG ARG LEU THR GLU HIS ASN SER GLY THR GLY SEQRES 4 A 96 ALA LYS TYR THR ARG LEU ALA LYS ARG ARG PRO VAL ILE SEQRES 5 A 96 MET ILE HIS THR GLU LYS PHE GLU THR ARG SER GLU ALA SEQRES 6 A 96 THR LYS ALA GLU ALA ALA PHE LYS LYS LEU THR ARG LYS SEQRES 7 A 96 GLN LYS GLU GLN TYR LEU LYS THR PHE HIS LEU GLU HIS SEQRES 8 A 96 HIS HIS HIS HIS HIS HELIX 1 1 GLU A 26 GLY A 39 1 14 HELIX 2 2 THR A 61 LEU A 75 1 15 HELIX 3 3 THR A 76 GLU A 90 1 15 SHEET 1 A 3 TYR A 20 THR A 24 0 SHEET 2 A 3 HIS A 7 LEU A 13 -1 N TYR A 10 O GLY A 22 SHEET 3 A 3 ILE A 52 PHE A 59 -1 O GLU A 57 N PHE A 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1