HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 18-FEB-05 1YWX TITLE SOLUTION STRUCTURE OF METHANOCOCCUS MARIPALUDIS PROTEIN MMP0443: THE TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MRR16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S24E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCOCCUS MARIPALUDIS; SOURCE 3 ORGANISM_TAXID: 39152; SOURCE 4 GENE: RPS24E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GFT NMR, MRR16, NESGC, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, UNKNOWN KEYWDS 3 FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.S.YANG,T.ACTON,Y.SHEN,L.MA,G.LIU,R.XIAO,G.T.MONTELIONE,T.SZYPERSKI, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 22-MAY-24 1YWX 1 REMARK REVDAT 4 02-MAR-22 1YWX 1 REMARK ATOM REVDAT 3 24-FEB-09 1YWX 1 VERSN REVDAT 2 18-APR-06 1YWX 1 AUTHOR REVDAT 1 05-APR-05 1YWX 0 JRNL AUTH C.S.YANG,T.ACTON,Y.SHEN,L.MA,G.LIU,R.XIAO,G.T.MONTELIONE, JRNL AUTH 2 T.SZYPERSKI JRNL TITL SOLUTION STRUCTURE OF METHANOCOCCUS MARIPALUDIS PROTEIN JRNL TITL 2 MMP0443: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET JRNL TITL 3 MRR16 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROSA 6.0, DYANA 1.5 REMARK 3 AUTHORS : GUENTERT, P (PROSA), GUENTERT, P (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YWX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000032015. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : N.A. REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : U-15N,13C REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : GFT (4,3)D HNNCABCA; GFT (4,3)D REMARK 210 CABCA(CO)NHN; GFT (4,3)D REMARK 210 HABCAB(CO)NHN; GFT (4,3)D HCCH; REMARK 210 SIMULTANEOUS HETERONUCLEAR REMARK 210 RESOLVED [1H,1H]-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.3.1.3, DYANA 1.5 REMARK 210 METHOD USED : SIMULATED ANNEALING TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H VAL A 23 O ALA A 64 1.52 REMARK 500 H ILE A 58 O GLU A 63 1.53 REMARK 500 O LEU A 39 H LEU A 43 1.54 REMARK 500 O GLU A 74 H ALA A 78 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 15 38.16 39.37 REMARK 500 1 ALA A 27 -57.11 75.80 REMARK 500 1 ALA A 28 112.16 -38.25 REMARK 500 1 PRO A 30 -162.11 -74.93 REMARK 500 1 SER A 31 -169.09 -119.41 REMARK 500 1 ASN A 44 61.55 65.71 REMARK 500 1 VAL A 49 52.78 -96.55 REMARK 500 1 LYS A 61 -154.76 -120.55 REMARK 500 1 LEU A 62 53.67 -103.47 REMARK 500 1 THR A 79 -61.96 -92.88 REMARK 500 1 ILE A 80 -79.00 -50.45 REMARK 500 1 GLU A 81 171.38 -45.80 REMARK 500 1 ASN A 89 108.48 -41.09 REMARK 500 1 ILE A 91 -82.55 -57.67 REMARK 500 1 GLU A 94 -158.02 -88.14 REMARK 500 1 ALA A 95 86.16 164.53 REMARK 500 1 GLU A 101 164.08 57.62 REMARK 500 2 GLN A 15 35.73 38.08 REMARK 500 2 ALA A 27 -73.46 163.04 REMARK 500 2 PRO A 30 -162.02 -75.00 REMARK 500 2 VAL A 49 57.49 -110.04 REMARK 500 2 LYS A 61 -152.56 -139.01 REMARK 500 2 LEU A 62 40.01 -98.66 REMARK 500 2 THR A 79 -65.30 -96.70 REMARK 500 2 ILE A 80 -73.76 -44.15 REMARK 500 2 GLU A 81 172.71 -47.31 REMARK 500 2 ILE A 91 -78.24 -63.73 REMARK 500 2 ALA A 95 66.51 176.33 REMARK 500 2 GLU A 101 168.66 67.45 REMARK 500 3 GLN A 15 40.97 73.50 REMARK 500 3 ALA A 27 154.14 63.32 REMARK 500 3 ALA A 28 99.79 53.96 REMARK 500 3 PRO A 30 -161.97 -75.06 REMARK 500 3 VAL A 49 53.86 -99.25 REMARK 500 3 LYS A 61 -153.03 -127.80 REMARK 500 3 LEU A 62 44.17 -99.93 REMARK 500 3 THR A 79 -65.68 -99.96 REMARK 500 3 ILE A 80 -81.07 -51.86 REMARK 500 3 GLU A 81 148.54 -37.75 REMARK 500 3 ILE A 91 -81.11 -52.02 REMARK 500 3 ALA A 95 67.18 167.28 REMARK 500 3 ALA A 97 124.28 61.95 REMARK 500 3 GLU A 98 -48.04 -169.95 REMARK 500 3 GLU A 101 168.58 73.43 REMARK 500 4 ILE A 6 -61.83 -94.05 REMARK 500 4 LEU A 13 -80.67 -41.22 REMARK 500 4 GLN A 15 47.41 70.06 REMARK 500 4 ALA A 27 -79.60 -176.93 REMARK 500 4 ALA A 28 143.53 -174.75 REMARK 500 4 PRO A 30 -90.21 -74.99 REMARK 500 REMARK 500 THIS ENTRY HAS 315 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MRR16 RELATED DB: TARGETDB DBREF 1YWX A 1 102 UNP P61193 RS24_METMP 1 102 SEQRES 1 A 102 MET ASP ILE SER ILE ILE SER ASP ARG ASN ASN PRO LEU SEQRES 2 A 102 LEU GLN ARG ARG GLU ILE LYS PHE THR VAL SER PHE ASP SEQRES 3 A 102 ALA ALA THR PRO SER ILE LYS ASP VAL LYS MET LYS LEU SEQRES 4 A 102 VAL ALA VAL LEU ASN ALA ASN LYS GLN VAL LEU VAL VAL SEQRES 5 A 102 ASP THR LEU ASP GLN ILE PHE GLY LYS LEU GLU ALA GLU SEQRES 6 A 102 GLY TYR ALA LYS ILE TYR ASN ASP GLU LYS ALA MET ALA SEQRES 7 A 102 THR ILE GLU THR LYS SER VAL LEU GLU LYS ASN LYS ILE SEQRES 8 A 102 GLU GLU GLU ALA GLU ALA GLU VAL ALA GLU GLU HELIX 1 1 SER A 31 ASN A 44 1 14 HELIX 2 2 ASP A 73 ILE A 80 1 8 HELIX 3 3 THR A 82 ASN A 89 1 8 SHEET 1 A 4 ASP A 2 ASN A 11 0 SHEET 2 A 4 ARG A 16 SER A 24 -1 O GLU A 18 N ARG A 9 SHEET 3 A 4 GLU A 63 ILE A 70 -1 O ALA A 64 N VAL A 23 SHEET 4 A 4 LEU A 50 GLN A 57 -1 N ASP A 56 O GLU A 65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1