HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 18-FEB-05 1YWZ OBSLTE 19-FEB-08 1YWZ 2K07 TITLE SOLUTION STRUCTURE OF HUMAN UBIQUITIN-FOLD MODIFIER- TITLE 2 CONJUGATING ENZYME 1(UFC1): THE NORTHEAST STRUCTURAL TITLE 3 GENOMICS CONSORTIUM TARGET HR41 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN CGI-126; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSPC155; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_COMMON: BACTERIA; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET21 KEYWDS NESG, GFT NMR, STRUCTRAL GENOMICS, HR41, STRUCTURAL KEYWDS 2 GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NORTHEAST KEYWDS 3 STRUCTURAL GENOMICS CONSORTIUM EXPDTA NMR, 20 STRUCTURES AUTHOR G.LIU,R.XIAO,D.K.SUKUMARAN,T.ACTON,L.MA,J.ARAMINI, AUTHOR 2 G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG) REVDAT 4 19-FEB-08 1YWZ 1 OBSLTE REVDAT 3 16-JAN-07 1YWZ 1 TITLE DBREF SEQADV REVDAT 2 18-APR-06 1YWZ 1 AUTHOR REVDAT 1 29-MAR-05 1YWZ 0 JRNL AUTH G.LIU,R.XIAO,D.K.SUKUMARAN,T.ACTON,L.MA,J.ARAMINI, JRNL AUTH 2 G.T.MONTELIONE,T.SZYPERSKI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YWZ COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.100 (2007-09-13) REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE RCSB ID CODE IS RCSB032017. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : NMR BUFFER 6.5 -- 5% D2O, REMARK 210 0.02% NAN3, 10MM DTT, 5MM REMARK 210 CACL2, 100MM NACL, 20MM MES, REMARK 210 95% H2O, 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : GFT (4,3)D HNNCABCA, GFT (4, REMARK 210 3)D CABCA(CO)NHN, GFT (4,3)D REMARK 210 HABCAB(CO)NHN, GFT (4,3) HCCH, REMARK 210 SIMULTANEOUS HETERONUCLEAR REMARK 210 RESOLVED [1H,1H]-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 1.5, NMRPIPE 2.3, XEASY REMARK 210 1.3.1.3 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING TORSION ANGLE REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD GFT NMR REMARK 210 TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 1 LEU A 168 REMARK 465 1 GLU A 169 REMARK 465 1 HIS A 170 REMARK 465 1 HIS A 171 REMARK 465 1 HIS A 172 REMARK 465 1 HIS A 173 REMARK 465 1 HIS A 174 REMARK 465 1 HIS A 175 REMARK 465 2 LEU A 168 REMARK 465 2 GLU A 169 REMARK 465 2 HIS A 170 REMARK 465 2 HIS A 171 REMARK 465 2 HIS A 172 REMARK 465 2 HIS A 173 REMARK 465 2 HIS A 174 REMARK 465 2 HIS A 175 REMARK 465 3 LEU A 168 REMARK 465 3 GLU A 169 REMARK 465 3 HIS A 170 REMARK 465 3 HIS A 171 REMARK 465 3 HIS A 172 REMARK 465 3 HIS A 173 REMARK 465 3 HIS A 174 REMARK 465 3 HIS A 175 REMARK 465 4 LEU A 168 REMARK 465 4 GLU A 169 REMARK 465 4 HIS A 170 REMARK 465 4 HIS A 171 REMARK 465 4 HIS A 172 REMARK 465 4 HIS A 173 REMARK 465 4 HIS A 174 REMARK 465 4 HIS A 175 REMARK 465 5 LEU A 168 REMARK 465 5 GLU A 169 REMARK 465 5 HIS A 170 REMARK 465 5 HIS A 171 REMARK 465 5 HIS A 172 REMARK 465 5 HIS A 173 REMARK 465 5 HIS A 174 REMARK 465 5 HIS A 175 REMARK 465 6 LEU A 168 REMARK 465 6 GLU A 169 REMARK 465 6 HIS A 170 REMARK 465 6 HIS A 171 REMARK 465 6 HIS A 172 REMARK 465 6 HIS A 173 REMARK 465 6 HIS A 174 REMARK 465 6 HIS A 175 REMARK 465 7 LEU A 168 REMARK 465 7 GLU A 169 REMARK 465 7 HIS A 170 REMARK 465 7 HIS A 171 REMARK 465 7 HIS A 172 REMARK 465 7 HIS A 173 REMARK 465 7 HIS A 174 REMARK 465 7 HIS A 175 REMARK 465 8 LEU A 168 REMARK 465 8 GLU A 169 REMARK 465 8 HIS A 170 REMARK 465 8 HIS A 171 REMARK 465 8 HIS A 172 REMARK 465 8 HIS A 173 REMARK 465 8 HIS A 174 REMARK 465 8 HIS A 175 REMARK 465 9 LEU A 168 REMARK 465 9 GLU A 169 REMARK 465 9 HIS A 170 REMARK 465 9 HIS A 171 REMARK 465 9 HIS A 172 REMARK 465 9 HIS A 173 REMARK 465 9 HIS A 174 REMARK 465 9 HIS A 175 REMARK 465 10 LEU A 168 REMARK 465 10 GLU A 169 REMARK 465 10 HIS A 170 REMARK 465 10 HIS A 171 REMARK 465 10 HIS A 172 REMARK 465 10 HIS A 173 REMARK 465 10 HIS A 174 REMARK 465 10 HIS A 175 REMARK 465 11 LEU A 168 REMARK 465 11 GLU A 169 REMARK 465 11 HIS A 170 REMARK 465 11 HIS A 171 REMARK 465 11 HIS A 172 REMARK 465 11 HIS A 173 REMARK 465 11 HIS A 174 REMARK 465 11 HIS A 175 REMARK 465 12 LEU A 168 REMARK 465 12 GLU A 169 REMARK 465 12 HIS A 170 REMARK 465 12 HIS A 171 REMARK 465 12 HIS A 172 REMARK 465 12 HIS A 173 REMARK 465 12 HIS A 174 REMARK 465 12 HIS A 175 REMARK 465 13 LEU A 168 REMARK 465 13 GLU A 169 REMARK 465 13 HIS A 170 REMARK 465 13 HIS A 171 REMARK 465 13 HIS A 172 REMARK 465 13 HIS A 173 REMARK 465 13 HIS A 174 REMARK 465 13 HIS A 175 REMARK 465 14 LEU A 168 REMARK 465 14 GLU A 169 REMARK 465 14 HIS A 170 REMARK 465 14 HIS A 171 REMARK 465 14 HIS A 172 REMARK 465 14 HIS A 173 REMARK 465 14 HIS A 174 REMARK 465 14 HIS A 175 REMARK 465 15 LEU A 168 REMARK 465 15 GLU A 169 REMARK 465 15 HIS A 170 REMARK 465 15 HIS A 171 REMARK 465 15 HIS A 172 REMARK 465 15 HIS A 173 REMARK 465 15 HIS A 174 REMARK 465 15 HIS A 175 REMARK 465 16 LEU A 168 REMARK 465 16 GLU A 169 REMARK 465 16 HIS A 170 REMARK 465 16 HIS A 171 REMARK 465 16 HIS A 172 REMARK 465 16 HIS A 173 REMARK 465 16 HIS A 174 REMARK 465 16 HIS A 175 REMARK 465 17 LEU A 168 REMARK 465 17 GLU A 169 REMARK 465 17 HIS A 170 REMARK 465 17 HIS A 171 REMARK 465 17 HIS A 172 REMARK 465 17 HIS A 173 REMARK 465 17 HIS A 174 REMARK 465 17 HIS A 175 REMARK 465 18 LEU A 168 REMARK 465 18 GLU A 169 REMARK 465 18 HIS A 170 REMARK 465 18 HIS A 171 REMARK 465 18 HIS A 172 REMARK 465 18 HIS A 173 REMARK 465 18 HIS A 174 REMARK 465 18 HIS A 175 REMARK 465 19 LEU A 168 REMARK 465 19 GLU A 169 REMARK 465 19 HIS A 170 REMARK 465 19 HIS A 171 REMARK 465 19 HIS A 172 REMARK 465 19 HIS A 173 REMARK 465 19 HIS A 174 REMARK 465 19 HIS A 175 REMARK 465 20 LEU A 168 REMARK 465 20 GLU A 169 REMARK 465 20 HIS A 170 REMARK 465 20 HIS A 171 REMARK 465 20 HIS A 172 REMARK 465 20 HIS A 173 REMARK 465 20 HIS A 174 REMARK 465 20 HIS A 175 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 160 169.88 54.11 REMARK 500 1 GLU A 163 167.70 54.80 REMARK 500 2 GLU A 163 161.62 64.06 REMARK 500 3 GLU A 163 166.72 55.22 REMARK 500 4 LYS A 60 -108.13 35.86 REMARK 500 4 LYS A 114 152.75 60.11 REMARK 500 5 HIS A 161 140.12 65.31 REMARK 500 6 LEU A 75 -57.20 71.50 REMARK 500 7 CYS A 165 151.57 71.81 REMARK 500 8 ALA A 107 165.82 56.37 REMARK 500 9 LYS A 60 -116.97 39.50 REMARK 500 9 ASP A 103 168.35 55.75 REMARK 500 9 MET A 109 153.38 61.50 REMARK 500 9 LYS A 162 128.47 78.42 REMARK 500 9 GLU A 163 151.97 67.65 REMARK 500 10 LYS A 60 -105.44 33.05 REMARK 500 10 ALA A 107 -72.03 73.36 REMARK 500 10 ARG A 111 -60.79 71.40 REMARK 500 10 LEU A 117 140.64 69.71 REMARK 500 11 ASP A 74 -73.25 74.24 REMARK 500 12 ASP A 74 -75.68 71.25 REMARK 500 12 ILE A 97 144.39 61.14 REMARK 500 12 ALA A 107 -55.72 79.55 REMARK 500 13 LEU A 75 -57.20 71.46 REMARK 500 13 ARG A 111 136.66 61.72 REMARK 500 13 CYS A 165 165.75 65.02 REMARK 500 14 LEU A 75 -57.29 70.83 REMARK 500 15 TRP A 53 -97.62 45.15 REMARK 500 15 LYS A 60 -107.67 36.44 REMARK 500 15 ILE A 97 158.97 63.37 REMARK 500 15 ARG A 111 -89.79 62.71 REMARK 500 16 TRP A 53 -97.42 46.83 REMARK 500 16 ASP A 74 -75.72 71.62 REMARK 500 16 ALA A 107 164.28 57.63 REMARK 500 16 CYS A 116 124.46 91.32 REMARK 500 16 GLU A 163 166.29 55.14 REMARK 500 17 LEU A 75 -57.35 71.45 REMARK 500 17 THR A 106 -118.86 44.36 REMARK 500 18 ASP A 52 131.50 62.21 REMARK 500 18 LEU A 75 -57.17 73.17 REMARK 500 19 TRP A 53 -91.99 53.85 REMARK 500 19 LYS A 108 -60.71 79.63 REMARK 500 19 GLN A 160 -59.25 70.47 REMARK 500 19 CYS A 165 165.02 59.28 REMARK 500 20 ASP A 74 -75.28 74.88 REMARK 500 20 ALA A 107 -84.46 60.89 REMARK 500 20 LYS A 114 141.63 61.89 REMARK 500 20 LEU A 117 -107.38 44.64 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HR41 RELATED DB: TARGETDB DBREF 1YWZ A 1 167 UNP Q9Y3C8 CGC6_HUMAN 1 167 SEQADV 1YWZ LEU A 168 UNP Q9Y3C8 CLONING ARTIFACT SEQADV 1YWZ GLU A 169 UNP Q9Y3C8 CLONING ARTIFACT SEQADV 1YWZ HIS A 170 UNP Q9Y3C8 CLONING ARTIFACT SEQADV 1YWZ HIS A 171 UNP Q9Y3C8 CLONING ARTIFACT SEQADV 1YWZ HIS A 172 UNP Q9Y3C8 CLONING ARTIFACT SEQADV 1YWZ HIS A 173 UNP Q9Y3C8 CLONING ARTIFACT SEQADV 1YWZ HIS A 174 UNP Q9Y3C8 CLONING ARTIFACT SEQADV 1YWZ HIS A 175 UNP Q9Y3C8 CLONING ARTIFACT SEQRES 1 A 175 MET ALA ASP GLU ALA THR ARG ARG VAL VAL SER GLU ILE SEQRES 2 A 175 PRO VAL LEU LYS THR ASN ALA GLY PRO ARG ASP ARG GLU SEQRES 3 A 175 LEU TRP VAL GLN ARG LEU LYS GLU GLU TYR GLN SER LEU SEQRES 4 A 175 ILE ARG TYR VAL GLU ASN ASN LYS ASN ALA ASP ASN ASP SEQRES 5 A 175 TRP PHE ARG LEU GLU SER ASN LYS GLU GLY THR ARG TRP SEQRES 6 A 175 PHE GLY LYS CYS TRP TYR ILE HIS ASP LEU LEU LYS TYR SEQRES 7 A 175 GLU PHE ASP ILE GLU PHE ASP ILE PRO ILE THR TYR PRO SEQRES 8 A 175 THR THR ALA PRO GLU ILE ALA VAL PRO GLU LEU ASP GLY SEQRES 9 A 175 LYS THR ALA LYS MET TYR ARG GLY GLY LYS ILE CYS LEU SEQRES 10 A 175 THR ASP HIS PHE LYS PRO LEU TRP ALA ARG ASN VAL PRO SEQRES 11 A 175 LYS PHE GLY LEU ALA HIS LEU MET ALA LEU GLY LEU GLY SEQRES 12 A 175 PRO TRP LEU ALA VAL GLU ILE PRO ASP LEU ILE GLN LYS SEQRES 13 A 175 GLY VAL ILE GLN HIS LYS GLU LYS CYS ASN GLN LEU GLU SEQRES 14 A 175 HIS HIS HIS HIS HIS HIS HELIX 1 1 ASP A 3 ILE A 13 1 11 HELIX 2 2 ASP A 24 ASP A 50 1 27 HELIX 3 3 VAL A 99 ASP A 103 5 5 HELIX 4 4 HIS A 120 ASN A 128 1 9 HELIX 5 5 GLY A 133 GLY A 141 1 9 HELIX 6 6 TRP A 145 VAL A 148 5 4 HELIX 7 7 GLU A 149 LYS A 156 1 8 SHEET 1 A 2 ARG A 64 GLY A 67 0 SHEET 2 A 2 ILE A 82 ASP A 85 -1 O PHE A 84 N TRP A 65 SHEET 1 B 2 ILE A 72 HIS A 73 0 SHEET 2 B 2 LEU A 76 LYS A 77 -1 O LEU A 76 N HIS A 73 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1