HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-FEB-05 1YX1 TITLE CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION PA2260 FROM TITLE 2 PSEUDOMONAS AERUGINOSA, POSSIBLE SUGAR PHOSPHATE ISOMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PA2260; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PA01; SOURCE 5 GENE: PA2260; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS STRUCTURAL GENOMICS, HYPOTHETICAL PROTEIN, PA2260, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,X.XU,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 4 13-JUL-11 1YX1 1 VERSN REVDAT 3 24-FEB-09 1YX1 1 VERSN REVDAT 2 11-APR-06 1YX1 1 AUTHOR REVDAT 1 05-APR-05 1YX1 0 JRNL AUTH J.OSIPIUK,X.XU,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN PA2260 FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 86.2 REMARK 3 NUMBER OF REFLECTIONS : 75767 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2258 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2491 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 38.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5890 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 681 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.51000 REMARK 3 B22 (A**2) : 1.44000 REMARK 3 B33 (A**2) : -0.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.053 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.281 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6221 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8437 ; 1.509 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 748 ; 5.806 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 323 ;37.033 ;22.539 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1085 ;14.070 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 87 ;16.021 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 932 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4792 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2986 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4181 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 587 ; 0.169 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 64 ; 0.226 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.184 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3771 ; 0.932 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6042 ; 1.641 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2542 ; 2.824 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2395 ; 4.550 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 252 REMARK 3 ORIGIN FOR THE GROUP (A): 26.1031 11.2188 53.7481 REMARK 3 T TENSOR REMARK 3 T11: -0.0264 T22: -0.0360 REMARK 3 T33: -0.0195 T12: -0.0019 REMARK 3 T13: -0.0253 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.5057 L22: 0.4485 REMARK 3 L33: 0.6884 L12: -0.2476 REMARK 3 L13: 0.1478 L23: -0.1991 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: 0.0437 S13: -0.0316 REMARK 3 S21: 0.0221 S22: 0.0104 S23: -0.0186 REMARK 3 S31: 0.0409 S32: -0.0201 S33: -0.0375 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 253 REMARK 3 ORIGIN FOR THE GROUP (A): 3.2334 39.9327 39.1471 REMARK 3 T TENSOR REMARK 3 T11: -0.0196 T22: -0.0387 REMARK 3 T33: -0.0416 T12: 0.0139 REMARK 3 T13: 0.0071 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.8939 L22: 0.5944 REMARK 3 L33: 0.7530 L12: -0.2304 REMARK 3 L13: -0.1161 L23: -0.0224 REMARK 3 S TENSOR REMARK 3 S11: 0.0591 S12: 0.0082 S13: 0.0384 REMARK 3 S21: -0.0580 S22: -0.0220 S23: 0.0226 REMARK 3 S31: -0.0752 S32: -0.0168 S33: -0.0370 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 3 C 252 REMARK 3 ORIGIN FOR THE GROUP (A): 32.5971 24.2403 16.4888 REMARK 3 T TENSOR REMARK 3 T11: -0.0148 T22: -0.0043 REMARK 3 T33: -0.0495 T12: -0.0448 REMARK 3 T13: 0.0116 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.2111 L22: 0.6390 REMARK 3 L33: 1.2827 L12: -0.0271 REMARK 3 L13: -0.2849 L23: -0.1033 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.0010 S13: -0.0098 REMARK 3 S21: -0.0512 S22: -0.0026 S23: -0.0489 REMARK 3 S31: -0.1341 S32: 0.1767 S33: 0.0036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1YX1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-05. REMARK 100 THE RCSB ID CODE IS RCSB032019. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97943 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75770 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 13.200 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SOLVE/RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS_TRIS PH 6.5, 8% PEG 5000 REMARK 280 MME, 4% ISOPROPYL ALCOHOL, 50 MM NACL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.81800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.13200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.95650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.13200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.81800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.95650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 PRO A 253 REMARK 465 GLN A 254 REMARK 465 GLU A 255 REMARK 465 GLU A 256 REMARK 465 ARG A 257 REMARK 465 GLN A 258 REMARK 465 HIS A 259 REMARK 465 GLY A 260 REMARK 465 GLY A 261 REMARK 465 SER A 262 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 GLN B 254 REMARK 465 GLU B 255 REMARK 465 GLU B 256 REMARK 465 ARG B 257 REMARK 465 GLN B 258 REMARK 465 HIS B 259 REMARK 465 GLY B 260 REMARK 465 GLY B 261 REMARK 465 SER B 262 REMARK 465 GLY C -1 REMARK 465 HIS C 0 REMARK 465 MSE C 1 REMARK 465 SER C 2 REMARK 465 PRO C 253 REMARK 465 GLN C 254 REMARK 465 GLU C 255 REMARK 465 GLU C 256 REMARK 465 ARG C 257 REMARK 465 GLN C 258 REMARK 465 HIS C 259 REMARK 465 GLY C 260 REMARK 465 GLY C 261 REMARK 465 SER C 262 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 161 O HOH A 1568 2.12 REMARK 500 OD1 ASP B 173 OH TYR B 211 2.15 REMARK 500 ND1 HIS A 187 O HOH A 1568 2.16 REMARK 500 OE1 GLU A 52 O HOH A 1536 2.17 REMARK 500 OD1 ASP A 173 OH TYR A 211 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 131 -161.68 -106.81 REMARK 500 GLU C 43 0.66 -60.64 REMARK 500 ASP C 131 -160.05 -106.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1531 DISTANCE = 5.46 ANGSTROMS REMARK 525 HOH A1540 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH A1567 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH B1498 DISTANCE = 5.13 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 161 OD2 REMARK 620 2 GLU B 228 OE1 63.2 REMARK 620 3 GLU B 228 OE2 105.3 43.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA C 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA B 1303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5559 RELATED DB: TARGETDB DBREF 1YX1 A 1 260 UNP Q9I1L3 Q9I1L3_PSEAE 1 260 DBREF 1YX1 B 1 260 UNP Q9I1L3 Q9I1L3_PSEAE 1 260 DBREF 1YX1 C 1 260 UNP Q9I1L3 Q9I1L3_PSEAE 1 260 SEQADV 1YX1 GLY A -1 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 HIS A 0 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 MSE A 1 UNP Q9I1L3 MET 1 MODIFIED RESIDUE SEQADV 1YX1 MSE A 32 UNP Q9I1L3 MET 32 MODIFIED RESIDUE SEQADV 1YX1 MSE A 158 UNP Q9I1L3 MET 158 MODIFIED RESIDUE SEQADV 1YX1 GLY A 261 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 SER A 262 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 GLY B -1 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 HIS B 0 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 MSE B 1 UNP Q9I1L3 MET 1 MODIFIED RESIDUE SEQADV 1YX1 MSE B 32 UNP Q9I1L3 MET 32 MODIFIED RESIDUE SEQADV 1YX1 MSE B 158 UNP Q9I1L3 MET 158 MODIFIED RESIDUE SEQADV 1YX1 GLY B 261 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 SER B 262 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 GLY C -1 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 HIS C 0 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 MSE C 1 UNP Q9I1L3 MET 1 MODIFIED RESIDUE SEQADV 1YX1 MSE C 32 UNP Q9I1L3 MET 32 MODIFIED RESIDUE SEQADV 1YX1 MSE C 158 UNP Q9I1L3 MET 158 MODIFIED RESIDUE SEQADV 1YX1 GLY C 261 UNP Q9I1L3 CLONING ARTIFACT SEQADV 1YX1 SER C 262 UNP Q9I1L3 CLONING ARTIFACT SEQRES 1 A 264 GLY HIS MSE SER LEU HIS PRO VAL SER ILE SER LEU SER SEQRES 2 A 264 SER TYR GLY ALA ASP LEU VAL ARG SER ARG GLY GLN ALA SEQRES 3 A 264 SER PHE LEU PRO LEU LEU ALA MSE ALA GLY ALA GLN ARG SEQRES 4 A 264 VAL GLU LEU ARG GLU GLU LEU PHE ALA GLY PRO PRO ASP SEQRES 5 A 264 THR GLU ALA LEU THR ALA ALA ILE GLN LEU GLN GLY LEU SEQRES 6 A 264 GLU CYS VAL PHE SER SER PRO LEU GLU LEU TRP ARG GLU SEQRES 7 A 264 ASP GLY GLN LEU ASN PRO GLU LEU GLU PRO THR LEU ARG SEQRES 8 A 264 ARG ALA GLU ALA CYS GLY ALA GLY TRP LEU LYS VAL SER SEQRES 9 A 264 LEU GLY LEU LEU PRO GLU GLN PRO ASP LEU ALA ALA LEU SEQRES 10 A 264 GLY ARG ARG LEU ALA ARG HIS GLY LEU GLN LEU LEU VAL SEQRES 11 A 264 GLU ASN ASP GLN THR PRO GLN GLY GLY ARG ILE GLU VAL SEQRES 12 A 264 LEU GLU ARG PHE PHE ARG LEU ALA GLU ARG GLN GLN LEU SEQRES 13 A 264 ASP LEU ALA MSE THR PHE ASP ILE GLY ASN TRP ARG TRP SEQRES 14 A 264 GLN GLU GLN ALA ALA ASP GLU ALA ALA LEU ARG LEU GLY SEQRES 15 A 264 ARG TYR VAL GLY TYR VAL HIS CYS LYS ALA VAL ILE ARG SEQRES 16 A 264 ASN ARG ASP GLY LYS LEU VAL ALA VAL PRO PRO SER ALA SEQRES 17 A 264 ALA ASP LEU GLN TYR TRP GLN ARG LEU LEU GLN HIS PHE SEQRES 18 A 264 PRO GLU GLY VAL ALA ARG ALA ILE GLU TYR PRO LEU GLN SEQRES 19 A 264 GLY ASP ASP LEU LEU SER LEU SER ARG ARG HIS ILE ALA SEQRES 20 A 264 ALA LEU ALA ARG LEU GLY GLN PRO GLN GLU GLU ARG GLN SEQRES 21 A 264 HIS GLY GLY SER SEQRES 1 B 264 GLY HIS MSE SER LEU HIS PRO VAL SER ILE SER LEU SER SEQRES 2 B 264 SER TYR GLY ALA ASP LEU VAL ARG SER ARG GLY GLN ALA SEQRES 3 B 264 SER PHE LEU PRO LEU LEU ALA MSE ALA GLY ALA GLN ARG SEQRES 4 B 264 VAL GLU LEU ARG GLU GLU LEU PHE ALA GLY PRO PRO ASP SEQRES 5 B 264 THR GLU ALA LEU THR ALA ALA ILE GLN LEU GLN GLY LEU SEQRES 6 B 264 GLU CYS VAL PHE SER SER PRO LEU GLU LEU TRP ARG GLU SEQRES 7 B 264 ASP GLY GLN LEU ASN PRO GLU LEU GLU PRO THR LEU ARG SEQRES 8 B 264 ARG ALA GLU ALA CYS GLY ALA GLY TRP LEU LYS VAL SER SEQRES 9 B 264 LEU GLY LEU LEU PRO GLU GLN PRO ASP LEU ALA ALA LEU SEQRES 10 B 264 GLY ARG ARG LEU ALA ARG HIS GLY LEU GLN LEU LEU VAL SEQRES 11 B 264 GLU ASN ASP GLN THR PRO GLN GLY GLY ARG ILE GLU VAL SEQRES 12 B 264 LEU GLU ARG PHE PHE ARG LEU ALA GLU ARG GLN GLN LEU SEQRES 13 B 264 ASP LEU ALA MSE THR PHE ASP ILE GLY ASN TRP ARG TRP SEQRES 14 B 264 GLN GLU GLN ALA ALA ASP GLU ALA ALA LEU ARG LEU GLY SEQRES 15 B 264 ARG TYR VAL GLY TYR VAL HIS CYS LYS ALA VAL ILE ARG SEQRES 16 B 264 ASN ARG ASP GLY LYS LEU VAL ALA VAL PRO PRO SER ALA SEQRES 17 B 264 ALA ASP LEU GLN TYR TRP GLN ARG LEU LEU GLN HIS PHE SEQRES 18 B 264 PRO GLU GLY VAL ALA ARG ALA ILE GLU TYR PRO LEU GLN SEQRES 19 B 264 GLY ASP ASP LEU LEU SER LEU SER ARG ARG HIS ILE ALA SEQRES 20 B 264 ALA LEU ALA ARG LEU GLY GLN PRO GLN GLU GLU ARG GLN SEQRES 21 B 264 HIS GLY GLY SER SEQRES 1 C 264 GLY HIS MSE SER LEU HIS PRO VAL SER ILE SER LEU SER SEQRES 2 C 264 SER TYR GLY ALA ASP LEU VAL ARG SER ARG GLY GLN ALA SEQRES 3 C 264 SER PHE LEU PRO LEU LEU ALA MSE ALA GLY ALA GLN ARG SEQRES 4 C 264 VAL GLU LEU ARG GLU GLU LEU PHE ALA GLY PRO PRO ASP SEQRES 5 C 264 THR GLU ALA LEU THR ALA ALA ILE GLN LEU GLN GLY LEU SEQRES 6 C 264 GLU CYS VAL PHE SER SER PRO LEU GLU LEU TRP ARG GLU SEQRES 7 C 264 ASP GLY GLN LEU ASN PRO GLU LEU GLU PRO THR LEU ARG SEQRES 8 C 264 ARG ALA GLU ALA CYS GLY ALA GLY TRP LEU LYS VAL SER SEQRES 9 C 264 LEU GLY LEU LEU PRO GLU GLN PRO ASP LEU ALA ALA LEU SEQRES 10 C 264 GLY ARG ARG LEU ALA ARG HIS GLY LEU GLN LEU LEU VAL SEQRES 11 C 264 GLU ASN ASP GLN THR PRO GLN GLY GLY ARG ILE GLU VAL SEQRES 12 C 264 LEU GLU ARG PHE PHE ARG LEU ALA GLU ARG GLN GLN LEU SEQRES 13 C 264 ASP LEU ALA MSE THR PHE ASP ILE GLY ASN TRP ARG TRP SEQRES 14 C 264 GLN GLU GLN ALA ALA ASP GLU ALA ALA LEU ARG LEU GLY SEQRES 15 C 264 ARG TYR VAL GLY TYR VAL HIS CYS LYS ALA VAL ILE ARG SEQRES 16 C 264 ASN ARG ASP GLY LYS LEU VAL ALA VAL PRO PRO SER ALA SEQRES 17 C 264 ALA ASP LEU GLN TYR TRP GLN ARG LEU LEU GLN HIS PHE SEQRES 18 C 264 PRO GLU GLY VAL ALA ARG ALA ILE GLU TYR PRO LEU GLN SEQRES 19 C 264 GLY ASP ASP LEU LEU SER LEU SER ARG ARG HIS ILE ALA SEQRES 20 C 264 ALA LEU ALA ARG LEU GLY GLN PRO GLN GLU GLU ARG GLN SEQRES 21 C 264 HIS GLY GLY SER MODRES 1YX1 MSE A 32 MET SELENOMETHIONINE MODRES 1YX1 MSE A 158 MET SELENOMETHIONINE MODRES 1YX1 MSE B 32 MET SELENOMETHIONINE MODRES 1YX1 MSE B 158 MET SELENOMETHIONINE MODRES 1YX1 MSE C 32 MET SELENOMETHIONINE MODRES 1YX1 MSE C 158 MET SELENOMETHIONINE HET MSE A 32 12 HET MSE A 158 8 HET MSE B 32 12 HET MSE B 158 8 HET MSE C 32 8 HET MSE C 158 8 HET NA B1304 1 HET IPA A1301 4 HET IPA C1302 4 HET IPA B1303 4 HETNAM MSE SELENOMETHIONINE HETNAM NA SODIUM ION HETNAM IPA ISOPROPYL ALCOHOL HETSYN IPA 2-PROPANOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 4 NA NA 1+ FORMUL 5 IPA 3(C3 H8 O) FORMUL 8 HOH *681(H2 O) HELIX 1 1 SER A 11 TYR A 13 5 3 HELIX 2 2 GLY A 14 GLY A 22 1 9 HELIX 3 3 GLN A 23 SER A 25 5 3 HELIX 4 4 PHE A 26 GLY A 34 1 9 HELIX 5 5 GLU A 43 PHE A 45 5 3 HELIX 6 6 ASP A 50 GLN A 61 1 12 HELIX 7 7 GLU A 83 CYS A 94 1 12 HELIX 8 8 ASP A 111 ALA A 120 1 10 HELIX 9 9 THR A 133 ARG A 138 1 6 HELIX 10 10 ARG A 138 GLN A 152 1 15 HELIX 11 11 GLY A 163 GLU A 169 5 7 HELIX 12 12 ALA A 171 GLY A 180 1 10 HELIX 13 13 SER A 205 GLN A 217 1 13 HELIX 14 14 ASP A 235 ARG A 249 1 15 HELIX 15 15 SER B 11 TYR B 13 5 3 HELIX 16 16 GLY B 14 GLY B 22 1 9 HELIX 17 17 GLN B 23 SER B 25 5 3 HELIX 18 18 PHE B 26 GLY B 34 1 9 HELIX 19 19 GLU B 43 PHE B 45 5 3 HELIX 20 20 ASP B 50 GLY B 62 1 13 HELIX 21 21 GLU B 83 CYS B 94 1 12 HELIX 22 22 ASP B 111 ALA B 120 1 10 HELIX 23 23 ARG B 138 GLN B 152 1 15 HELIX 24 24 GLY B 163 GLU B 169 5 7 HELIX 25 25 ALA B 171 GLY B 180 1 10 HELIX 26 26 SER B 205 GLN B 217 1 13 HELIX 27 27 ASP B 235 ARG B 249 1 15 HELIX 28 28 SER C 11 TYR C 13 5 3 HELIX 29 29 GLY C 14 GLY C 22 1 9 HELIX 30 30 GLN C 23 SER C 25 5 3 HELIX 31 31 PHE C 26 GLY C 34 1 9 HELIX 32 32 GLU C 43 PHE C 45 5 3 HELIX 33 33 ASP C 50 GLY C 62 1 13 HELIX 34 34 GLU C 83 CYS C 94 1 12 HELIX 35 35 ASP C 111 ARG C 121 1 11 HELIX 36 36 ARG C 138 GLN C 152 1 15 HELIX 37 37 GLY C 163 GLU C 169 5 7 HELIX 38 38 ALA C 171 GLY C 180 1 10 HELIX 39 39 SER C 205 GLN C 217 1 13 HELIX 40 40 ASP C 235 ARG C 249 1 15 SHEET 1 A 9 VAL A 6 SER A 9 0 SHEET 2 A 9 ARG A 37 ARG A 41 1 O GLU A 39 N ILE A 8 SHEET 3 A 9 GLU A 64 TRP A 74 1 O SER A 68 N LEU A 40 SHEET 4 A 9 TRP A 98 GLY A 104 1 O TRP A 98 N PHE A 67 SHEET 5 A 9 GLN A 125 GLU A 129 1 O LEU A 127 N LEU A 99 SHEET 6 A 9 LEU A 156 ASP A 161 1 O ALA A 157 N VAL A 128 SHEET 7 A 9 VAL A 183 CYS A 188 1 O TYR A 185 N PHE A 160 SHEET 8 A 9 ALA A 224 ILE A 227 1 O ALA A 226 N VAL A 186 SHEET 9 A 9 VAL A 6 SER A 9 1 N SER A 9 O ILE A 227 SHEET 1 B 2 ALA A 190 ARG A 193 0 SHEET 2 B 2 LEU A 199 VAL A 202 -1 O VAL A 200 N ILE A 192 SHEET 1 C 9 VAL B 6 SER B 9 0 SHEET 2 C 9 ARG B 37 ARG B 41 1 O GLU B 39 N ILE B 8 SHEET 3 C 9 GLU B 64 TRP B 74 1 O SER B 68 N LEU B 40 SHEET 4 C 9 TRP B 98 GLY B 104 1 O SER B 102 N LEU B 71 SHEET 5 C 9 GLN B 125 GLU B 129 1 O LEU B 127 N LEU B 99 SHEET 6 C 9 ALA B 157 ASP B 161 1 O ALA B 157 N VAL B 128 SHEET 7 C 9 VAL B 183 CYS B 188 1 O HIS B 187 N PHE B 160 SHEET 8 C 9 ALA B 224 ILE B 227 1 O ALA B 226 N VAL B 186 SHEET 9 C 9 VAL B 6 SER B 9 1 N SER B 9 O ILE B 227 SHEET 1 D 2 ALA B 190 ARG B 193 0 SHEET 2 D 2 LEU B 199 VAL B 202 -1 O VAL B 200 N ILE B 192 SHEET 1 E 9 VAL C 6 SER C 9 0 SHEET 2 E 9 ARG C 37 ARG C 41 1 O GLU C 39 N ILE C 8 SHEET 3 E 9 GLU C 64 TRP C 74 1 O VAL C 66 N LEU C 40 SHEET 4 E 9 TRP C 98 GLY C 104 1 O LYS C 100 N PHE C 67 SHEET 5 E 9 GLN C 125 GLU C 129 1 O LEU C 127 N LEU C 99 SHEET 6 E 9 LEU C 156 ASP C 161 1 O ALA C 157 N VAL C 128 SHEET 7 E 9 VAL C 183 CYS C 188 1 O GLY C 184 N MSE C 158 SHEET 8 E 9 ALA C 224 ILE C 227 1 O ALA C 226 N VAL C 186 SHEET 9 E 9 VAL C 6 SER C 9 1 N SER C 9 O ILE C 227 SHEET 1 F 2 ALA C 190 ARG C 193 0 SHEET 2 F 2 LEU C 199 VAL C 202 -1 O VAL C 200 N ILE C 192 LINK C ALA A 31 N MSE A 32 1555 1555 1.32 LINK C MSE A 32 N ALA A 33 1555 1555 1.34 LINK C ALA A 157 N MSE A 158 1555 1555 1.33 LINK C MSE A 158 N THR A 159 1555 1555 1.33 LINK C ALA B 31 N MSE B 32 1555 1555 1.33 LINK C MSE B 32 N ALA B 33 1555 1555 1.34 LINK C ALA B 157 N MSE B 158 1555 1555 1.33 LINK C MSE B 158 N THR B 159 1555 1555 1.34 LINK C ALA C 31 N MSE C 32 1555 1555 1.33 LINK C MSE C 32 N ALA C 33 1555 1555 1.33 LINK C ALA C 157 N MSE C 158 1555 1555 1.33 LINK C MSE C 158 N THR C 159 1555 1555 1.34 LINK OD2 ASP B 161 NA NA B1304 1555 1555 2.78 LINK OE1 GLU B 228 NA NA B1304 1555 1555 2.76 LINK OE2 GLU B 228 NA NA B1304 1555 1555 2.99 CISPEP 1 ALA C 46 GLY C 47 0 0.96 SITE 1 AC1 6 GLU B 129 ASP B 161 ASN B 164 HIS B 187 SITE 2 AC1 6 LYS B 189 GLU B 228 SITE 1 AC2 3 ALA A 157 ARG A 181 VAL A 183 SITE 1 AC3 4 ALA C 157 ARG C 181 TYR C 182 VAL C 183 SITE 1 AC4 2 TRP A 167 ARG B 181 CRYST1 81.636 91.913 124.264 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012249 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010880 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008047 0.00000