data_1YXH # _entry.id 1YXH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YXH RCSB RCSB032035 WWPDB D_1000032035 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1MH7 _pdbx_database_related.details 'Crystal Structure Of A Calcium-Free Isoform Of Phospholipase A2 From Naja Naja Sagittifera At 2.0 A Resolution' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YXH _pdbx_database_status.recvd_initial_deposition_date 2005-02-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jabeen, T.' 1 'Singh, N.' 2 'Singh, R.K.' 3 'Sharma, S.' 4 'Srinivasan, A.' 5 'Singh, T.P.' 6 # _citation.id primary _citation.title 'Crystal structure of a novel phospholipase A(2) from Naja naja sagittifera with a strong anticoagulant activity' _citation.journal_abbrev Toxicon _citation.journal_volume 46 _citation.page_first 865 _citation.page_last 875 _citation.year 2005 _citation.journal_id_ASTM TOXIA6 _citation.country UK _citation.journal_id_ISSN 0041-0101 _citation.journal_id_CSD 2043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16269164 _citation.pdbx_database_id_DOI 10.1016/j.toxicon.2005.08.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jabeen, T.' 1 primary 'Singh, N.' 2 primary 'Singh, R.K.' 3 primary 'Ethayathulla, A.S.' 4 primary 'Sharma, S.' 5 primary 'Srinivasan, A.' 6 primary 'Singh, T.P.' 7 # _cell.entry_id 1YXH _cell.length_a 42.817 _cell.length_b 42.817 _cell.length_c 65.994 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YXH _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'phospholipase A2' 14211.938 1 3.1.1.4 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 non-polymer syn ETHANOL 46.068 2 ? ? ? ? 5 water nat water 18.015 116 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNRPMPLNIYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNQAQEITGCRPKWKTYTYECSQ GTLTCKGRNNACAATVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SNRPMPLNIYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNQAQEITGCRPKWKTYTYECSQ GTLTCKGRNNACAATVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ARG n 1 4 PRO n 1 5 MET n 1 6 PRO n 1 7 LEU n 1 8 ASN n 1 9 ILE n 1 10 TYR n 1 11 GLN n 1 12 PHE n 1 13 LYS n 1 14 ASN n 1 15 MET n 1 16 ILE n 1 17 GLN n 1 18 CYS n 1 19 THR n 1 20 VAL n 1 21 PRO n 1 22 SER n 1 23 ARG n 1 24 SER n 1 25 TRP n 1 26 TRP n 1 27 ASP n 1 28 PHE n 1 29 ALA n 1 30 ASP n 1 31 TYR n 1 32 GLY n 1 33 CYS n 1 34 TYR n 1 35 CYS n 1 36 GLY n 1 37 ARG n 1 38 GLY n 1 39 GLY n 1 40 SER n 1 41 GLY n 1 42 THR n 1 43 PRO n 1 44 VAL n 1 45 ASP n 1 46 ASP n 1 47 LEU n 1 48 ASP n 1 49 ARG n 1 50 CYS n 1 51 CYS n 1 52 GLN n 1 53 VAL n 1 54 HIS n 1 55 ASP n 1 56 ASN n 1 57 CYS n 1 58 TYR n 1 59 ASN n 1 60 GLN n 1 61 ALA n 1 62 GLN n 1 63 GLU n 1 64 ILE n 1 65 THR n 1 66 GLY n 1 67 CYS n 1 68 ARG n 1 69 PRO n 1 70 LYS n 1 71 TRP n 1 72 LYS n 1 73 THR n 1 74 TYR n 1 75 THR n 1 76 TYR n 1 77 GLU n 1 78 CYS n 1 79 SER n 1 80 GLN n 1 81 GLY n 1 82 THR n 1 83 LEU n 1 84 THR n 1 85 CYS n 1 86 LYS n 1 87 GLY n 1 88 ARG n 1 89 ASN n 1 90 ASN n 1 91 ALA n 1 92 CYS n 1 93 ALA n 1 94 ALA n 1 95 THR n 1 96 VAL n 1 97 CYS n 1 98 ASP n 1 99 CYS n 1 100 ASP n 1 101 ARG n 1 102 LEU n 1 103 ALA n 1 104 ALA n 1 105 ILE n 1 106 CYS n 1 107 PHE n 1 108 ALA n 1 109 GLY n 1 110 ALA n 1 111 PRO n 1 112 TYR n 1 113 ASN n 1 114 ASP n 1 115 ASN n 1 116 ASN n 1 117 TYR n 1 118 ASN n 1 119 ILE n 1 120 ASP n 1 121 LEU n 1 122 LYS n 1 123 ALA n 1 124 ARG n 1 125 CYS n 1 126 GLN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Naja sagittifera' _entity_src_nat.pdbx_ncbi_taxonomy_id 195058 _entity_src_nat.genus Naja _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6T179_NAJSG _struct_ref.pdbx_db_accession Q6T179 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SNRPMPLNIYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNQAQEITGCRPKWKTYTYECSQ GTLTCKGRNNACAATVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YXH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 126 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6T179 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 126 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -6 _struct_ref_seq.pdbx_auth_seq_align_end 120 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YXH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 42.6 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '10mM phosphate buffer, 2mM CaCl2, 25% ethanol, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-06-20 _diffrn_detector.details Mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1YXH _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.86 _reflns.d_resolution_low 42.64 _reflns.number_all 49325 _reflns.number_obs 9822 _reflns.percent_possible_obs 98 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.86 _reflns_shell.d_res_low 1.9 _reflns_shell.percent_possible_all 94.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YXH _refine.ls_number_reflns_obs 9349 _refine.ls_number_reflns_all 9349 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.86 _refine.ls_percent_reflns_obs 98.02 _refine.ls_R_factor_obs 0.19608 _refine.ls_R_factor_all 0.221 _refine.ls_R_factor_R_work 0.19455 _refine.ls_R_factor_R_free 0.2251 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 473 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.B_iso_mean 27.030 _refine.aniso_B[1][1] -0.19 _refine.aniso_B[2][2] -0.19 _refine.aniso_B[3][3] 0.37 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.169 _refine.pdbx_overall_ESU_R_Free 0.144 _refine.overall_SU_ML 0.104 _refine.overall_SU_B 3.455 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 931 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 1059 _refine_hist.d_res_high 1.86 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.021 ? 965 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.077 1.927 ? 1308 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 2.683 3.000 ? 117 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.865 15.000 ? 154 'X-RAY DIFFRACTION' ? r_chiral_restr 0.074 0.200 ? 131 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 760 'X-RAY DIFFRACTION' ? r_nbd_refined 0.297 0.300 ? 456 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.176 0.500 ? 92 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.236 0.300 ? 45 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.240 0.500 ? 12 'X-RAY DIFFRACTION' ? r_mcbond_it 0.515 1.500 ? 591 'X-RAY DIFFRACTION' ? r_mcangle_it 1.047 2.000 ? 941 'X-RAY DIFFRACTION' ? r_scbond_it 1.434 3.000 ? 374 'X-RAY DIFFRACTION' ? r_scangle_it 2.416 4.500 ? 367 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.862 _refine_ls_shell.d_res_low 1.910 _refine_ls_shell.number_reflns_R_work 591 _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.336 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 31 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 1YXH _struct.title 'Crystal structure of a novel phospholipase A2 from Naja naja sagittifera with a strong anticoagulant activity' _struct.pdbx_descriptor 'phospholipase A2 (E.C.3.1.1.4)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YXH _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PLA2, anticoagulation, monomer, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 8 ? VAL A 20 ? ASN A 1 VAL A 13 1 ? 13 HELX_P HELX_P2 2 SER A 24 ? PHE A 28 ? SER A 18 PHE A 22 5 ? 5 HELX_P HELX_P3 3 ASP A 45 ? GLN A 62 ? ASP A 39 GLN A 56 1 ? 18 HELX_P HELX_P4 4 ASN A 90 ? ALA A 110 ? ASN A 84 ALA A 104 1 ? 21 HELX_P HELX_P5 5 ASN A 113 ? TYR A 117 ? ASN A 107 TYR A 111 5 ? 5 HELX_P HELX_P6 6 ASP A 120 ? CYS A 125 ? ASP A 114 CYS A 119 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 78 SG ? ? A CYS 11 A CYS 72 1_555 ? ? ? ? ? ? ? 2.001 ? disulf2 disulf ? ? A CYS 33 SG ? ? ? 1_555 A CYS 125 SG ? ? A CYS 27 A CYS 119 1_555 ? ? ? ? ? ? ? 2.024 ? disulf3 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 51 SG ? ? A CYS 29 A CYS 45 1_555 ? ? ? ? ? ? ? 2.214 ? disulf4 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 44 A CYS 100 1_555 ? ? ? ? ? ? ? 2.014 ? disulf5 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 99 SG ? ? A CYS 51 A CYS 93 1_555 ? ? ? ? ? ? ? 2.024 ? disulf6 disulf ? ? A CYS 67 SG ? ? ? 1_555 A CYS 92 SG ? ? A CYS 61 A CYS 86 1_555 ? ? ? ? ? ? ? 2.027 ? disulf7 disulf ? ? A CYS 85 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 79 A CYS 91 1_555 ? ? ? ? ? ? ? 2.020 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 A TYR 34 O ? ? A CA 1001 A TYR 28 1_555 ? ? ? ? ? ? ? 2.397 ? metalc2 metalc ? ? B CA . CA ? ? ? 1_555 A GLY 36 O ? ? A CA 1001 A GLY 30 1_555 ? ? ? ? ? ? ? 2.553 ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 E EOH . O ? ? A CA 1001 A EOH 2002 1_555 ? ? ? ? ? ? ? 2.635 ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 55 OD1 ? ? A CA 1001 A ASP 49 1_555 ? ? ? ? ? ? ? 2.743 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 55 OD2 ? ? A CA 1001 A ASP 49 1_555 ? ? ? ? ? ? ? 2.371 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 A GLY 38 O ? ? A CA 1001 A GLY 32 1_555 ? ? ? ? ? ? ? 2.436 ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 1001 A HOH 3050 1_555 ? ? ? ? ? ? ? 2.371 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 30 ? TYR A 31 ? ASP A 24 TYR A 25 A 2 CYS A 35 ? GLY A 36 ? CYS A 29 GLY A 30 B 1 TYR A 76 ? SER A 79 ? TYR A 70 SER A 73 B 2 THR A 82 ? CYS A 85 ? THR A 76 CYS A 79 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 31 ? N TYR A 25 O CYS A 35 ? O CYS A 29 B 1 2 N GLU A 77 ? N GLU A 71 O THR A 84 ? O THR A 78 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 1001' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PO4 A 3001' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EOH A 2001' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EOH A 2002' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 TYR A 34 ? TYR A 28 . ? 1_555 ? 2 AC1 6 GLY A 36 ? GLY A 30 . ? 1_555 ? 3 AC1 6 GLY A 38 ? GLY A 32 . ? 1_555 ? 4 AC1 6 ASP A 55 ? ASP A 49 . ? 1_555 ? 5 AC1 6 EOH E . ? EOH A 2002 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 3050 . ? 1_555 ? 7 AC2 2 SER A 40 ? SER A 34 . ? 1_555 ? 8 AC2 2 GLN A 126 ? GLN A 120 . ? 1_555 ? 9 AC3 2 PHE A 28 ? PHE A 22 . ? 1_555 ? 10 AC3 2 EOH E . ? EOH A 2002 . ? 1_555 ? 11 AC4 6 TYR A 34 ? TYR A 28 . ? 1_555 ? 12 AC4 6 GLY A 36 ? GLY A 30 . ? 1_555 ? 13 AC4 6 ASP A 55 ? ASP A 49 . ? 1_555 ? 14 AC4 6 CA B . ? CA A 1001 . ? 1_555 ? 15 AC4 6 EOH D . ? EOH A 2001 . ? 1_555 ? 16 AC4 6 HOH F . ? HOH A 3052 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YXH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YXH _atom_sites.fract_transf_matrix[1][1] 0.023355 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023355 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015153 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -6 ? ? ? A . n A 1 2 ASN 2 -5 ? ? ? A . n A 1 3 ARG 3 -4 ? ? ? A . n A 1 4 PRO 4 -3 ? ? ? A . n A 1 5 MET 5 -2 ? ? ? A . n A 1 6 PRO 6 -1 ? ? ? A . n A 1 7 LEU 7 0 ? ? ? A . n A 1 8 ASN 8 1 1 ASN ASN A . n A 1 9 ILE 9 2 2 ILE ILE A . n A 1 10 TYR 10 3 3 TYR TYR A . n A 1 11 GLN 11 4 4 GLN GLN A . n A 1 12 PHE 12 5 5 PHE PHE A . n A 1 13 LYS 13 6 6 LYS LYS A . n A 1 14 ASN 14 7 7 ASN ASN A . n A 1 15 MET 15 8 8 MET MET A . n A 1 16 ILE 16 9 9 ILE ILE A . n A 1 17 GLN 17 10 10 GLN GLN A . n A 1 18 CYS 18 11 11 CYS CYS A . n A 1 19 THR 19 12 12 THR THR A . n A 1 20 VAL 20 13 13 VAL VAL A . n A 1 21 PRO 21 14 14 PRO PRO A . n A 1 22 SER 22 15 15 SER SER A . n A 1 23 ARG 23 17 17 ARG ARG A . n A 1 24 SER 24 18 18 SER SER A . n A 1 25 TRP 25 19 19 TRP TRP A . n A 1 26 TRP 26 20 20 TRP TRP A . n A 1 27 ASP 27 21 21 ASP ASP A . n A 1 28 PHE 28 22 22 PHE PHE A . n A 1 29 ALA 29 23 23 ALA ALA A . n A 1 30 ASP 30 24 24 ASP ASP A . n A 1 31 TYR 31 25 25 TYR TYR A . n A 1 32 GLY 32 26 26 GLY GLY A . n A 1 33 CYS 33 27 27 CYS CYS A . n A 1 34 TYR 34 28 28 TYR TYR A . n A 1 35 CYS 35 29 29 CYS CYS A . n A 1 36 GLY 36 30 30 GLY GLY A . n A 1 37 ARG 37 31 31 ARG ARG A . n A 1 38 GLY 38 32 32 GLY GLY A . n A 1 39 GLY 39 33 33 GLY GLY A . n A 1 40 SER 40 34 34 SER SER A . n A 1 41 GLY 41 35 35 GLY GLY A . n A 1 42 THR 42 36 36 THR THR A . n A 1 43 PRO 43 37 37 PRO PRO A . n A 1 44 VAL 44 38 38 VAL VAL A . n A 1 45 ASP 45 39 39 ASP ASP A . n A 1 46 ASP 46 40 40 ASP ASP A . n A 1 47 LEU 47 41 41 LEU LEU A . n A 1 48 ASP 48 42 42 ASP ASP A . n A 1 49 ARG 49 43 43 ARG ARG A . n A 1 50 CYS 50 44 44 CYS CYS A . n A 1 51 CYS 51 45 45 CYS CYS A . n A 1 52 GLN 52 46 46 GLN GLN A . n A 1 53 VAL 53 47 47 VAL VAL A . n A 1 54 HIS 54 48 48 HIS HIS A . n A 1 55 ASP 55 49 49 ASP ASP A . n A 1 56 ASN 56 50 50 ASN ASN A . n A 1 57 CYS 57 51 51 CYS CYS A . n A 1 58 TYR 58 52 52 TYR TYR A . n A 1 59 ASN 59 53 53 ASN ASN A . n A 1 60 GLN 60 54 54 GLN GLN A . n A 1 61 ALA 61 55 55 ALA ALA A . n A 1 62 GLN 62 56 56 GLN GLN A . n A 1 63 GLU 63 57 57 GLU GLU A . n A 1 64 ILE 64 58 58 ILE ILE A . n A 1 65 THR 65 59 59 THR THR A . n A 1 66 GLY 66 60 60 GLY GLY A . n A 1 67 CYS 67 61 61 CYS CYS A . n A 1 68 ARG 68 62 62 ARG ARG A . n A 1 69 PRO 69 63 63 PRO PRO A . n A 1 70 LYS 70 64 64 LYS LYS A . n A 1 71 TRP 71 65 65 TRP TRP A . n A 1 72 LYS 72 66 66 LYS LYS A . n A 1 73 THR 73 67 67 THR THR A . n A 1 74 TYR 74 68 68 TYR TYR A . n A 1 75 THR 75 69 69 THR THR A . n A 1 76 TYR 76 70 70 TYR TYR A . n A 1 77 GLU 77 71 71 GLU GLU A . n A 1 78 CYS 78 72 72 CYS CYS A . n A 1 79 SER 79 73 73 SER SER A . n A 1 80 GLN 80 74 74 GLN GLN A . n A 1 81 GLY 81 75 75 GLY GLY A . n A 1 82 THR 82 76 76 THR THR A . n A 1 83 LEU 83 77 77 LEU LEU A . n A 1 84 THR 84 78 78 THR THR A . n A 1 85 CYS 85 79 79 CYS CYS A . n A 1 86 LYS 86 80 80 LYS LYS A . n A 1 87 GLY 87 81 81 GLY GLY A . n A 1 88 ARG 88 82 82 ARG ARG A . n A 1 89 ASN 89 83 83 ASN ASN A . n A 1 90 ASN 90 84 84 ASN ASN A . n A 1 91 ALA 91 85 85 ALA ALA A . n A 1 92 CYS 92 86 86 CYS CYS A . n A 1 93 ALA 93 87 87 ALA ALA A . n A 1 94 ALA 94 88 88 ALA ALA A . n A 1 95 THR 95 89 89 THR THR A . n A 1 96 VAL 96 90 90 VAL VAL A . n A 1 97 CYS 97 91 91 CYS CYS A . n A 1 98 ASP 98 92 92 ASP ASP A . n A 1 99 CYS 99 93 93 CYS CYS A . n A 1 100 ASP 100 94 94 ASP ASP A . n A 1 101 ARG 101 95 95 ARG ARG A . n A 1 102 LEU 102 96 96 LEU LEU A . n A 1 103 ALA 103 97 97 ALA ALA A . n A 1 104 ALA 104 98 98 ALA ALA A . n A 1 105 ILE 105 99 99 ILE ILE A . n A 1 106 CYS 106 100 100 CYS CYS A . n A 1 107 PHE 107 101 101 PHE PHE A . n A 1 108 ALA 108 102 102 ALA ALA A . n A 1 109 GLY 109 103 103 GLY GLY A . n A 1 110 ALA 110 104 104 ALA ALA A . n A 1 111 PRO 111 105 105 PRO PRO A . n A 1 112 TYR 112 106 106 TYR TYR A . n A 1 113 ASN 113 107 107 ASN ASN A . n A 1 114 ASP 114 108 108 ASP ASP A . n A 1 115 ASN 115 109 109 ASN ASN A . n A 1 116 ASN 116 110 110 ASN ASN A . n A 1 117 TYR 117 111 111 TYR TYR A . n A 1 118 ASN 118 112 112 ASN ASN A . n A 1 119 ILE 119 113 113 ILE ILE A . n A 1 120 ASP 120 114 114 ASP ASP A . n A 1 121 LEU 121 115 115 LEU LEU A . n A 1 122 LYS 122 116 116 LYS LYS A . n A 1 123 ALA 123 117 117 ALA ALA A . n A 1 124 ARG 124 118 118 ARG ARG A . n A 1 125 CYS 125 119 119 CYS CYS A . n A 1 126 GLN 126 120 120 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 1001 1 CA CA A . C 3 PO4 1 3001 1 PO4 PO4 A . D 4 EOH 1 2001 1 EOH EOH A . E 4 EOH 1 2002 2 EOH EOH A . F 5 HOH 1 3002 1 HOH HOH A . F 5 HOH 2 3003 2 HOH HOH A . F 5 HOH 3 3004 3 HOH HOH A . F 5 HOH 4 3005 4 HOH HOH A . F 5 HOH 5 3006 5 HOH HOH A . F 5 HOH 6 3007 6 HOH HOH A . F 5 HOH 7 3008 7 HOH HOH A . F 5 HOH 8 3009 8 HOH HOH A . F 5 HOH 9 3010 9 HOH HOH A . F 5 HOH 10 3011 10 HOH HOH A . F 5 HOH 11 3012 11 HOH HOH A . F 5 HOH 12 3013 12 HOH HOH A . F 5 HOH 13 3014 13 HOH HOH A . F 5 HOH 14 3015 14 HOH HOH A . F 5 HOH 15 3016 15 HOH HOH A . F 5 HOH 16 3017 16 HOH HOH A . F 5 HOH 17 3018 17 HOH HOH A . F 5 HOH 18 3019 18 HOH HOH A . F 5 HOH 19 3020 19 HOH HOH A . F 5 HOH 20 3021 20 HOH HOH A . F 5 HOH 21 3022 21 HOH HOH A . F 5 HOH 22 3023 22 HOH HOH A . F 5 HOH 23 3024 23 HOH HOH A . F 5 HOH 24 3025 24 HOH HOH A . F 5 HOH 25 3026 25 HOH HOH A . F 5 HOH 26 3027 26 HOH HOH A . F 5 HOH 27 3028 27 HOH HOH A . F 5 HOH 28 3029 28 HOH HOH A . F 5 HOH 29 3030 29 HOH HOH A . F 5 HOH 30 3031 31 HOH HOH A . F 5 HOH 31 3032 32 HOH HOH A . F 5 HOH 32 3033 33 HOH HOH A . F 5 HOH 33 3034 34 HOH HOH A . F 5 HOH 34 3035 35 HOH HOH A . F 5 HOH 35 3036 36 HOH HOH A . F 5 HOH 36 3037 37 HOH HOH A . F 5 HOH 37 3038 38 HOH HOH A . F 5 HOH 38 3039 39 HOH HOH A . F 5 HOH 39 3040 40 HOH HOH A . F 5 HOH 40 3041 41 HOH HOH A . F 5 HOH 41 3042 42 HOH HOH A . F 5 HOH 42 3043 43 HOH HOH A . F 5 HOH 43 3044 44 HOH HOH A . F 5 HOH 44 3045 45 HOH HOH A . F 5 HOH 45 3046 46 HOH HOH A . F 5 HOH 46 3047 47 HOH HOH A . F 5 HOH 47 3048 48 HOH HOH A . F 5 HOH 48 3049 49 HOH HOH A . F 5 HOH 49 3050 50 HOH HOH A . F 5 HOH 50 3051 51 HOH HOH A . F 5 HOH 51 3052 52 HOH HOH A . F 5 HOH 52 3053 53 HOH HOH A . F 5 HOH 53 3054 54 HOH HOH A . F 5 HOH 54 3055 55 HOH HOH A . F 5 HOH 55 3056 56 HOH HOH A . F 5 HOH 56 3057 57 HOH HOH A . F 5 HOH 57 3058 58 HOH HOH A . F 5 HOH 58 3059 59 HOH HOH A . F 5 HOH 59 3060 60 HOH HOH A . F 5 HOH 60 3061 61 HOH HOH A . F 5 HOH 61 3062 62 HOH HOH A . F 5 HOH 62 3063 63 HOH HOH A . F 5 HOH 63 3064 64 HOH HOH A . F 5 HOH 64 3065 65 HOH HOH A . F 5 HOH 65 3066 66 HOH HOH A . F 5 HOH 66 3067 67 HOH HOH A . F 5 HOH 67 3068 68 HOH HOH A . F 5 HOH 68 3069 69 HOH HOH A . F 5 HOH 69 3070 70 HOH HOH A . F 5 HOH 70 3071 71 HOH HOH A . F 5 HOH 71 3072 72 HOH HOH A . F 5 HOH 72 3073 73 HOH HOH A . F 5 HOH 73 3074 74 HOH HOH A . F 5 HOH 74 3075 75 HOH HOH A . F 5 HOH 75 3076 76 HOH HOH A . F 5 HOH 76 3077 77 HOH HOH A . F 5 HOH 77 3078 78 HOH HOH A . F 5 HOH 78 3079 79 HOH HOH A . F 5 HOH 79 3080 80 HOH HOH A . F 5 HOH 80 3081 81 HOH HOH A . F 5 HOH 81 3082 82 HOH HOH A . F 5 HOH 82 3083 83 HOH HOH A . F 5 HOH 83 3084 84 HOH HOH A . F 5 HOH 84 3085 85 HOH HOH A . F 5 HOH 85 3086 86 HOH HOH A . F 5 HOH 86 3087 87 HOH HOH A . F 5 HOH 87 3088 88 HOH HOH A . F 5 HOH 88 3089 89 HOH HOH A . F 5 HOH 89 3090 90 HOH HOH A . F 5 HOH 90 3091 91 HOH HOH A . F 5 HOH 91 3092 92 HOH HOH A . F 5 HOH 92 3093 93 HOH HOH A . F 5 HOH 93 3094 94 HOH HOH A . F 5 HOH 94 3095 95 HOH HOH A . F 5 HOH 95 3096 96 HOH HOH A . F 5 HOH 96 3097 97 HOH HOH A . F 5 HOH 97 3098 98 HOH HOH A . F 5 HOH 98 3099 99 HOH HOH A . F 5 HOH 99 3100 100 HOH HOH A . F 5 HOH 100 3101 101 HOH HOH A . F 5 HOH 101 3102 102 HOH HOH A . F 5 HOH 102 3103 103 HOH HOH A . F 5 HOH 103 3104 104 HOH HOH A . F 5 HOH 104 3105 105 HOH HOH A . F 5 HOH 105 3106 106 HOH HOH A . F 5 HOH 106 3107 107 HOH HOH A . F 5 HOH 107 3108 108 HOH HOH A . F 5 HOH 108 3109 109 HOH HOH A . F 5 HOH 109 3110 110 HOH HOH A . F 5 HOH 110 3111 111 HOH HOH A . F 5 HOH 111 3112 112 HOH HOH A . F 5 HOH 112 3113 113 HOH HOH A . F 5 HOH 113 3114 114 HOH HOH A . F 5 HOH 114 3115 115 HOH HOH A . F 5 HOH 115 3116 116 HOH HOH A . F 5 HOH 116 3117 117 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A TYR 34 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A GLY 36 ? A GLY 30 ? 1_555 90.7 ? 2 O ? A TYR 34 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? E EOH . ? A EOH 2002 ? 1_555 79.6 ? 3 O ? A GLY 36 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? E EOH . ? A EOH 2002 ? 1_555 73.5 ? 4 O ? A TYR 34 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 55 ? A ASP 49 ? 1_555 103.1 ? 5 O ? A GLY 36 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 55 ? A ASP 49 ? 1_555 136.8 ? 6 O ? E EOH . ? A EOH 2002 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 55 ? A ASP 49 ? 1_555 69.3 ? 7 O ? A TYR 34 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 55 ? A ASP 49 ? 1_555 106.6 ? 8 O ? A GLY 36 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 55 ? A ASP 49 ? 1_555 160.4 ? 9 O ? E EOH . ? A EOH 2002 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 55 ? A ASP 49 ? 1_555 117.9 ? 10 OD1 ? A ASP 55 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 55 ? A ASP 49 ? 1_555 48.9 ? 11 O ? A TYR 34 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A GLY 38 ? A GLY 32 ? 1_555 93.0 ? 12 O ? A GLY 36 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A GLY 38 ? A GLY 32 ? 1_555 87.0 ? 13 O ? E EOH . ? A EOH 2002 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A GLY 38 ? A GLY 32 ? 1_555 158.9 ? 14 OD1 ? A ASP 55 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A GLY 38 ? A GLY 32 ? 1_555 131.9 ? 15 OD2 ? A ASP 55 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A GLY 38 ? A GLY 32 ? 1_555 83.1 ? 16 O ? A TYR 34 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? F HOH . ? A HOH 3050 ? 1_555 167.9 ? 17 O ? A GLY 36 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? F HOH . ? A HOH 3050 ? 1_555 77.2 ? 18 O ? E EOH . ? A EOH 2002 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? F HOH . ? A HOH 3050 ? 1_555 96.7 ? 19 OD1 ? A ASP 55 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? F HOH . ? A HOH 3050 ? 1_555 86.2 ? 20 OD2 ? A ASP 55 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? F HOH . ? A HOH 3050 ? 1_555 85.3 ? 21 O ? A GLY 38 ? A GLY 32 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? F HOH . ? A HOH 3050 ? 1_555 86.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-05-03 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.0 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 24 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 24 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 24 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.91 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.61 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 24 ? ? -152.68 76.18 2 1 ASP A 39 ? ? -160.39 -166.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -6 ? A SER 1 2 1 Y 1 A ASN -5 ? A ASN 2 3 1 Y 1 A ARG -4 ? A ARG 3 4 1 Y 1 A PRO -3 ? A PRO 4 5 1 Y 1 A MET -2 ? A MET 5 6 1 Y 1 A PRO -1 ? A PRO 6 7 1 Y 1 A LEU 0 ? A LEU 7 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'PHOSPHATE ION' PO4 4 ETHANOL EOH 5 water HOH #