data_1YY1 # _entry.id 1YY1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YY1 pdb_00001yy1 10.2210/pdb1yy1/pdb RCSB RCSB032055 ? ? WWPDB D_1000032055 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-02-21 2 'Structure model' 1 1 2008-01-31 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2019-12-25 5 'Structure model' 2 1 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Polymer sequence' 6 4 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_poly 2 4 'Structure model' pdbx_entity_src_syn 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_assembly_prop 6 4 'Structure model' pdbx_struct_mod_residue 7 4 'Structure model' pdbx_struct_oper_list 8 4 'Structure model' struct_conn 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond 11 5 'Structure model' database_2 12 5 'Structure model' pdbx_entry_details 13 5 'Structure model' pdbx_modification_feature 14 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 2 4 'Structure model' '_pdbx_entity_src_syn.details' 3 4 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 4 4 'Structure model' '_pdbx_entity_src_syn.organism_common_name' 5 4 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 6 4 'Structure model' '_pdbx_nmr_software.name' 7 4 'Structure model' '_pdbx_struct_mod_residue.parent_comp_id' 8 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 5 'Structure model' '_database_2.pdbx_DOI' 10 5 'Structure model' '_database_2.pdbx_database_accession' 11 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 12 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 13 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YY1 _pdbx_database_status.recvd_initial_deposition_date 2005-02-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1YY2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Spyroulias, G.A.' 1 'Zompra, A.' 2 'Magafa, V.' 3 'Cordopatis, P.' 4 # _citation.id primary _citation.title 'NMR Conformational Analysis of LHRH and its analogues' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Spyroulias, G.A.' 1 ? primary 'Zompra, A.' 2 ? primary 'Magafa, V.' 3 ? primary 'Cordopatis, P.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Gonadotropin Releasing Hormone' _entity.formula_weight 1183.300 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Luteinizing Hormone Releasing Hormone' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(PCA)HWSYGLRPG(NH2)' _entity_poly.pdbx_seq_one_letter_code_can QHWSYGLRPGX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 HIS n 1 3 TRP n 1 4 SER n 1 5 TYR n 1 6 GLY n 1 7 LEU n 1 8 ARG n 1 9 PRO n 1 10 GLY n 1 11 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 1 PCA PYR A . n A 1 2 HIS 2 2 2 HIS HIS A . n A 1 3 TRP 3 3 3 TRP TRP A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 NH2 11 11 11 NH2 NH2 A . n # _exptl.entry_id 1YY1 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1YY1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1YY1 _struct.title 'NMR Conformational Analysis of LHRH and its analogues' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 1YY1 _struct_keywords.pdbx_keywords 'HORMONE/GROWTH FACTOR' _struct_keywords.text 'U-shape like peptide, HORMONE-GROWTH FACTOR COMPLEX' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1YY1 _struct_ref.pdbx_db_accession 1YY1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YY1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 11 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1YY1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 11 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 11 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 120 ? 1 MORE 1 ? 1 'SSA (A^2)' 1250 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PCA 1 C ? ? ? 1_555 A HIS 2 N ? ? A PCA 1 A HIS 2 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A GLY 10 C ? ? ? 1_555 A NH2 11 N ? ? A GLY 10 A NH2 11 1_555 ? ? ? ? ? ? ? 1.334 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 PCA A 1 ? . . . . PCA A 1 ? 1_555 . . . . . . . GLN 1 PCA 'Pyrrolidone carboxylic acid' 'Named protein modification' 2 NH2 A 11 ? GLY A 10 ? NH2 A 11 ? 1_555 GLY A 10 ? 1_555 . . GLY 12 NH2 None 'Terminal amidation' # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NH2 _struct_site.pdbx_auth_seq_id 11 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE NH2 A 11' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 2 ? HIS A 2 . ? 1_555 ? 2 AC1 5 TRP A 3 ? TRP A 3 . ? 1_555 ? 3 AC1 5 SER A 4 ? SER A 4 . ? 1_555 ? 4 AC1 5 TYR A 5 ? TYR A 5 . ? 1_555 ? 5 AC1 5 ARG A 8 ? ARG A 8 . ? 1_555 ? # _pdbx_entry_details.entry_id 1YY1 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 2 ? ? -169.52 91.94 2 1 TYR A 5 ? ? -71.51 -144.12 3 1 LEU A 7 ? ? -163.04 -163.32 4 1 PRO A 9 ? ? -68.55 99.60 5 2 HIS A 2 ? ? -173.93 88.97 6 2 TYR A 5 ? ? -71.75 -142.81 7 2 PRO A 9 ? ? -66.73 99.51 8 3 HIS A 2 ? ? -175.37 88.48 9 3 TYR A 5 ? ? -71.84 -141.27 10 4 HIS A 2 ? ? -171.92 90.90 11 4 SER A 4 ? ? -68.95 77.43 12 4 TYR A 5 ? ? -70.70 -142.99 13 4 PRO A 9 ? ? -67.89 94.81 14 5 HIS A 2 ? ? -172.17 92.96 15 5 SER A 4 ? ? -65.18 77.61 16 5 TYR A 5 ? ? -73.51 -143.03 17 6 HIS A 2 ? ? -170.51 89.68 18 6 TYR A 5 ? ? -70.99 -142.51 19 6 PRO A 9 ? ? -69.31 92.29 20 7 HIS A 2 ? ? -170.65 89.12 21 7 TYR A 5 ? ? -70.40 -142.52 22 7 LEU A 7 ? ? -158.67 -159.58 23 7 PRO A 9 ? ? -69.18 93.94 24 8 HIS A 2 ? ? -172.99 85.98 25 8 SER A 4 ? ? -69.25 77.78 26 8 TYR A 5 ? ? -73.23 -142.97 27 9 HIS A 2 ? ? -173.36 86.86 28 9 SER A 4 ? ? -69.39 77.93 29 9 TYR A 5 ? ? -72.90 -143.55 30 10 HIS A 2 ? ? -174.90 90.42 31 10 TYR A 5 ? ? -71.67 -143.42 32 10 PRO A 9 ? ? -67.31 98.98 33 11 HIS A 2 ? ? -176.08 91.86 34 11 SER A 4 ? ? -69.89 76.91 35 11 TYR A 5 ? ? -71.88 -144.90 36 11 PRO A 9 ? ? -68.73 95.49 37 12 HIS A 2 ? ? -169.24 92.79 38 12 SER A 4 ? ? -69.47 77.85 39 12 TYR A 5 ? ? -71.69 -143.33 40 12 LEU A 7 ? ? -166.32 -159.18 41 13 HIS A 2 ? ? -171.93 93.09 42 13 TYR A 5 ? ? -70.15 -141.92 43 13 LEU A 7 ? ? -168.23 -166.52 44 14 HIS A 2 ? ? -171.27 91.04 45 14 TYR A 5 ? ? -70.32 -143.70 46 14 LEU A 7 ? ? -169.37 -164.28 47 15 HIS A 2 ? ? -172.06 91.32 48 15 SER A 4 ? ? -69.33 82.19 49 15 TYR A 5 ? ? -70.94 -140.70 50 15 LEU A 7 ? ? -170.29 -164.56 51 16 HIS A 2 ? ? -169.56 91.25 52 16 TYR A 5 ? ? -71.18 -140.43 53 17 HIS A 2 ? ? -177.14 90.35 54 17 SER A 4 ? ? -69.87 78.92 55 17 TYR A 5 ? ? -71.85 -142.95 56 17 LEU A 7 ? ? -169.09 -159.26 57 18 HIS A 2 ? ? -172.07 90.61 58 18 TYR A 5 ? ? -72.56 -144.77 59 18 LEU A 7 ? ? -167.88 -160.79 60 18 PRO A 9 ? ? -69.88 96.99 61 19 HIS A 2 ? ? -167.14 84.38 62 19 SER A 4 ? ? -65.58 75.80 63 19 TYR A 5 ? ? -76.75 -147.77 64 19 LEU A 7 ? ? -157.38 -156.77 65 20 HIS A 2 ? ? -167.93 94.43 66 20 SER A 4 ? ? -69.10 75.26 67 20 TYR A 5 ? ? -75.82 -143.75 68 20 LEU A 7 ? ? -162.89 -164.73 69 21 HIS A 2 ? ? -171.62 91.43 70 21 TYR A 5 ? ? -72.36 -146.03 71 21 LEU A 7 ? ? -166.93 -160.06 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id PCA _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id PCA _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLN _pdbx_struct_mod_residue.details 'PYROGLUTAMIC ACID' # _pdbx_nmr_ensemble.entry_id 1YY1 _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 21 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1YY1 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents 2.0-3.0mM _pdbx_nmr_sample_details.solvent_system DMSO # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH ? _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D TOCSY' 1 2 1 '2D NOESY' 1 3 1 '1H-13C HSQC' 1 # _pdbx_nmr_details.entry_id 1YY1 _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_refine.entry_id 1YY1 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details 'The models have been determined using 138 NOE-derived distance constraints' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.1 Bruker 1 processing XwinNMR 3.1 Bruker 2 'data analysis' XEASY 1.3 'Eccles C, Guntert P, Billeter M, Wuthrich K' 3 'structure solution' DYANA 1.5 'Guntert P, Mumenthaler C, Wuthrich K' 4 refinement Amber 5.0 ? 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 GLY N N N N 28 GLY CA C N N 29 GLY C C N N 30 GLY O O N N 31 GLY OXT O N N 32 GLY H H N N 33 GLY H2 H N N 34 GLY HA2 H N N 35 GLY HA3 H N N 36 GLY HXT H N N 37 HIS N N N N 38 HIS CA C N S 39 HIS C C N N 40 HIS O O N N 41 HIS CB C N N 42 HIS CG C Y N 43 HIS ND1 N Y N 44 HIS CD2 C Y N 45 HIS CE1 C Y N 46 HIS NE2 N Y N 47 HIS OXT O N N 48 HIS H H N N 49 HIS H2 H N N 50 HIS HA H N N 51 HIS HB2 H N N 52 HIS HB3 H N N 53 HIS HD1 H N N 54 HIS HD2 H N N 55 HIS HE1 H N N 56 HIS HE2 H N N 57 HIS HXT H N N 58 LEU N N N N 59 LEU CA C N S 60 LEU C C N N 61 LEU O O N N 62 LEU CB C N N 63 LEU CG C N N 64 LEU CD1 C N N 65 LEU CD2 C N N 66 LEU OXT O N N 67 LEU H H N N 68 LEU H2 H N N 69 LEU HA H N N 70 LEU HB2 H N N 71 LEU HB3 H N N 72 LEU HG H N N 73 LEU HD11 H N N 74 LEU HD12 H N N 75 LEU HD13 H N N 76 LEU HD21 H N N 77 LEU HD22 H N N 78 LEU HD23 H N N 79 LEU HXT H N N 80 NH2 N N N N 81 NH2 HN1 H N N 82 NH2 HN2 H N N 83 PCA N N N N 84 PCA CA C N S 85 PCA CB C N N 86 PCA CG C N N 87 PCA CD C N N 88 PCA OE O N N 89 PCA C C N N 90 PCA O O N N 91 PCA OXT O N N 92 PCA H H N N 93 PCA HA H N N 94 PCA HB2 H N N 95 PCA HB3 H N N 96 PCA HG2 H N N 97 PCA HG3 H N N 98 PCA HXT H N N 99 PRO N N N N 100 PRO CA C N S 101 PRO C C N N 102 PRO O O N N 103 PRO CB C N N 104 PRO CG C N N 105 PRO CD C N N 106 PRO OXT O N N 107 PRO H H N N 108 PRO HA H N N 109 PRO HB2 H N N 110 PRO HB3 H N N 111 PRO HG2 H N N 112 PRO HG3 H N N 113 PRO HD2 H N N 114 PRO HD3 H N N 115 PRO HXT H N N 116 SER N N N N 117 SER CA C N S 118 SER C C N N 119 SER O O N N 120 SER CB C N N 121 SER OG O N N 122 SER OXT O N N 123 SER H H N N 124 SER H2 H N N 125 SER HA H N N 126 SER HB2 H N N 127 SER HB3 H N N 128 SER HG H N N 129 SER HXT H N N 130 TRP N N N N 131 TRP CA C N S 132 TRP C C N N 133 TRP O O N N 134 TRP CB C N N 135 TRP CG C Y N 136 TRP CD1 C Y N 137 TRP CD2 C Y N 138 TRP NE1 N Y N 139 TRP CE2 C Y N 140 TRP CE3 C Y N 141 TRP CZ2 C Y N 142 TRP CZ3 C Y N 143 TRP CH2 C Y N 144 TRP OXT O N N 145 TRP H H N N 146 TRP H2 H N N 147 TRP HA H N N 148 TRP HB2 H N N 149 TRP HB3 H N N 150 TRP HD1 H N N 151 TRP HE1 H N N 152 TRP HE3 H N N 153 TRP HZ2 H N N 154 TRP HZ3 H N N 155 TRP HH2 H N N 156 TRP HXT H N N 157 TYR N N N N 158 TYR CA C N S 159 TYR C C N N 160 TYR O O N N 161 TYR CB C N N 162 TYR CG C Y N 163 TYR CD1 C Y N 164 TYR CD2 C Y N 165 TYR CE1 C Y N 166 TYR CE2 C Y N 167 TYR CZ C Y N 168 TYR OH O N N 169 TYR OXT O N N 170 TYR H H N N 171 TYR H2 H N N 172 TYR HA H N N 173 TYR HB2 H N N 174 TYR HB3 H N N 175 TYR HD1 H N N 176 TYR HD2 H N N 177 TYR HE1 H N N 178 TYR HE2 H N N 179 TYR HH H N N 180 TYR HXT H N N 181 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 GLY N CA sing N N 27 GLY N H sing N N 28 GLY N H2 sing N N 29 GLY CA C sing N N 30 GLY CA HA2 sing N N 31 GLY CA HA3 sing N N 32 GLY C O doub N N 33 GLY C OXT sing N N 34 GLY OXT HXT sing N N 35 HIS N CA sing N N 36 HIS N H sing N N 37 HIS N H2 sing N N 38 HIS CA C sing N N 39 HIS CA CB sing N N 40 HIS CA HA sing N N 41 HIS C O doub N N 42 HIS C OXT sing N N 43 HIS CB CG sing N N 44 HIS CB HB2 sing N N 45 HIS CB HB3 sing N N 46 HIS CG ND1 sing Y N 47 HIS CG CD2 doub Y N 48 HIS ND1 CE1 doub Y N 49 HIS ND1 HD1 sing N N 50 HIS CD2 NE2 sing Y N 51 HIS CD2 HD2 sing N N 52 HIS CE1 NE2 sing Y N 53 HIS CE1 HE1 sing N N 54 HIS NE2 HE2 sing N N 55 HIS OXT HXT sing N N 56 LEU N CA sing N N 57 LEU N H sing N N 58 LEU N H2 sing N N 59 LEU CA C sing N N 60 LEU CA CB sing N N 61 LEU CA HA sing N N 62 LEU C O doub N N 63 LEU C OXT sing N N 64 LEU CB CG sing N N 65 LEU CB HB2 sing N N 66 LEU CB HB3 sing N N 67 LEU CG CD1 sing N N 68 LEU CG CD2 sing N N 69 LEU CG HG sing N N 70 LEU CD1 HD11 sing N N 71 LEU CD1 HD12 sing N N 72 LEU CD1 HD13 sing N N 73 LEU CD2 HD21 sing N N 74 LEU CD2 HD22 sing N N 75 LEU CD2 HD23 sing N N 76 LEU OXT HXT sing N N 77 NH2 N HN1 sing N N 78 NH2 N HN2 sing N N 79 PCA N CA sing N N 80 PCA N CD sing N N 81 PCA N H sing N N 82 PCA CA CB sing N N 83 PCA CA C sing N N 84 PCA CA HA sing N N 85 PCA CB CG sing N N 86 PCA CB HB2 sing N N 87 PCA CB HB3 sing N N 88 PCA CG CD sing N N 89 PCA CG HG2 sing N N 90 PCA CG HG3 sing N N 91 PCA CD OE doub N N 92 PCA C O doub N N 93 PCA C OXT sing N N 94 PCA OXT HXT sing N N 95 PRO N CA sing N N 96 PRO N CD sing N N 97 PRO N H sing N N 98 PRO CA C sing N N 99 PRO CA CB sing N N 100 PRO CA HA sing N N 101 PRO C O doub N N 102 PRO C OXT sing N N 103 PRO CB CG sing N N 104 PRO CB HB2 sing N N 105 PRO CB HB3 sing N N 106 PRO CG CD sing N N 107 PRO CG HG2 sing N N 108 PRO CG HG3 sing N N 109 PRO CD HD2 sing N N 110 PRO CD HD3 sing N N 111 PRO OXT HXT sing N N 112 SER N CA sing N N 113 SER N H sing N N 114 SER N H2 sing N N 115 SER CA C sing N N 116 SER CA CB sing N N 117 SER CA HA sing N N 118 SER C O doub N N 119 SER C OXT sing N N 120 SER CB OG sing N N 121 SER CB HB2 sing N N 122 SER CB HB3 sing N N 123 SER OG HG sing N N 124 SER OXT HXT sing N N 125 TRP N CA sing N N 126 TRP N H sing N N 127 TRP N H2 sing N N 128 TRP CA C sing N N 129 TRP CA CB sing N N 130 TRP CA HA sing N N 131 TRP C O doub N N 132 TRP C OXT sing N N 133 TRP CB CG sing N N 134 TRP CB HB2 sing N N 135 TRP CB HB3 sing N N 136 TRP CG CD1 doub Y N 137 TRP CG CD2 sing Y N 138 TRP CD1 NE1 sing Y N 139 TRP CD1 HD1 sing N N 140 TRP CD2 CE2 doub Y N 141 TRP CD2 CE3 sing Y N 142 TRP NE1 CE2 sing Y N 143 TRP NE1 HE1 sing N N 144 TRP CE2 CZ2 sing Y N 145 TRP CE3 CZ3 doub Y N 146 TRP CE3 HE3 sing N N 147 TRP CZ2 CH2 doub Y N 148 TRP CZ2 HZ2 sing N N 149 TRP CZ3 CH2 sing Y N 150 TRP CZ3 HZ3 sing N N 151 TRP CH2 HH2 sing N N 152 TRP OXT HXT sing N N 153 TYR N CA sing N N 154 TYR N H sing N N 155 TYR N H2 sing N N 156 TYR CA C sing N N 157 TYR CA CB sing N N 158 TYR CA HA sing N N 159 TYR C O doub N N 160 TYR C OXT sing N N 161 TYR CB CG sing N N 162 TYR CB HB2 sing N N 163 TYR CB HB3 sing N N 164 TYR CG CD1 doub Y N 165 TYR CG CD2 sing Y N 166 TYR CD1 CE1 sing Y N 167 TYR CD1 HD1 sing N N 168 TYR CD2 CE2 doub Y N 169 TYR CD2 HD2 sing N N 170 TYR CE1 CZ doub Y N 171 TYR CE1 HE1 sing N N 172 TYR CE2 CZ sing Y N 173 TYR CE2 HE2 sing N N 174 TYR CZ OH sing N N 175 TYR OH HH sing N N 176 TYR OXT HXT sing N N 177 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DPX _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 400 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 1YY1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_