HEADER LUMINESCENT PROTEIN 28-FEB-05 1YZW TITLE THE 2.1A CRYSTAL STRUCTURE OF THE FAR-RED FLUORESCENT PROTEIN HCRED: TITLE 2 INHERENT CONFORMATIONAL FLEXIBILITY OF THE CHROMOPHORE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GFP-LIKE NON-FLUORESCENT CHROMOPROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: HCRED; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HETERACTIS CRISPA; SOURCE 3 ORGANISM_COMMON: LEATHERY SEA ANEMONE; SOURCE 4 ORGANISM_TAXID: 175771; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQE10 KEYWDS LUMINESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.G.WILMANN,J.PETERSEN,A.PETTIKIRIARACHCHI,A.M.BUCKLE,R.J.DEVENISH, AUTHOR 2 M.PRESCOTT,J.ROSSJOHN REVDAT 4 15-NOV-23 1YZW 1 REMARK SEQADV LINK ATOM REVDAT 3 30-JUN-09 1YZW 1 SEQADV REVDAT 2 24-FEB-09 1YZW 1 VERSN REVDAT 1 17-MAY-05 1YZW 0 JRNL AUTH P.G.WILMANN,J.PETERSEN,A.PETTIKIRIARACHCHI,A.M.BUCKLE, JRNL AUTH 2 S.C.SMITH,S.OLSEN,M.A.PERUGINI,R.J.DEVENISH,M.PRESCOTT, JRNL AUTH 3 J.ROSSJOHN JRNL TITL THE 2.1A CRYSTAL STRUCTURE OF THE FAR-RED FLUORESCENT JRNL TITL 2 PROTEIN HCRED: INHERENT CONFORMATIONAL FLEXIBILITY OF THE JRNL TITL 3 CHROMOPHORE JRNL REF J.MOL.BIOL. V. 349 223 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15876379 JRNL DOI 10.1016/J.JMB.2005.03.020 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 59986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3196 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4430 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3320 REMARK 3 BIN FREE R VALUE SET COUNT : 232 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7092 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.22000 REMARK 3 B22 (A**2) : -4.86000 REMARK 3 B33 (A**2) : 1.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.243 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.203 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.184 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.534 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7335 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 6400 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9893 ; 1.059 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14941 ; 0.931 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 872 ; 5.843 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 336 ;31.608 ;23.214 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1212 ;13.324 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;17.401 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1008 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8161 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1579 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1291 ; 0.168 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6421 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3305 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 4331 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 421 ; 0.145 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.091 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 49 ; 0.209 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 24 ; 0.127 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5664 ; 1.049 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1808 ; 0.163 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7044 ; 1.371 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3603 ; 2.172 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2849 ; 2.950 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1YZW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032121. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.11050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.23450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.36650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.23450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.11050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.36650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 227 REMARK 465 ASN A 228 REMARK 465 MET B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 227 REMARK 465 ASN B 228 REMARK 465 MET C 2 REMARK 465 ALA C 3 REMARK 465 ALA C 227 REMARK 465 ASN C 228 REMARK 465 MET D 2 REMARK 465 ALA D 3 REMARK 465 ALA D 227 REMARK 465 ASN D 228 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 307 O HOH D 336 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 208 -36.49 -149.88 REMARK 500 LEU B 5 -54.62 -29.73 REMARK 500 GLU C 208 -3.25 -144.28 REMARK 500 GLU D 208 -36.22 -140.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG C 1002 REMARK 999 REMARK 999 SEQUENCE REMARK 999 ABOUT RESIDUE 37, 123, 144, 169, 174 AND 202, REMARK 999 THESE SEQUENCE DERIVED FROM THE VARIANT HCRED-2A. REMARK 999 GLU 64, TYR 65 AND GLY 66 ARE MODIFIED TO MAKE REMARK 999 CHROMOPHORE (CRU 64). DBREF 1YZW A 2 228 UNP Q95W85 NFCP_RADMA 1 227 DBREF 1YZW B 2 228 UNP Q95W85 NFCP_RADMA 1 227 DBREF 1YZW C 2 228 UNP Q95W85 NFCP_RADMA 1 227 DBREF 1YZW D 2 228 UNP Q95W85 NFCP_RADMA 1 227 SEQADV 1YZW ALA A 37 UNP Q95W85 THR 36 SEE REMARK 999 SEQADV 1YZW CRU A 64 UNP Q95W85 GLU 63 CHROMOPHORE SEQADV 1YZW CRU A 64 UNP Q95W85 TYR 64 CHROMOPHORE SEQADV 1YZW CRU A 64 UNP Q95W85 GLY 65 CHROMOPHORE SEQADV 1YZW HIS A 123 UNP Q95W85 LEU 122 SEE REMARK 999 SEQADV 1YZW SER A 144 UNP Q95W85 CYS 143 SEE REMARK 999 SEQADV 1YZW HIS A 169 UNP Q95W85 ARG 168 SEE REMARK 999 SEQADV 1YZW HIS A 174 UNP Q95W85 LEU 173 SEE REMARK 999 SEQADV 1YZW LEU A 202 UNP Q95W85 PRO 201 SEE REMARK 999 SEQADV 1YZW ALA B 37 UNP Q95W85 THR 36 SEE REMARK 999 SEQADV 1YZW CRU B 64 UNP Q95W85 GLU 63 CHROMOPHORE SEQADV 1YZW CRU B 64 UNP Q95W85 TYR 64 CHROMOPHORE SEQADV 1YZW CRU B 64 UNP Q95W85 GLY 65 CHROMOPHORE SEQADV 1YZW HIS B 123 UNP Q95W85 LEU 122 SEE REMARK 999 SEQADV 1YZW SER B 144 UNP Q95W85 CYS 143 SEE REMARK 999 SEQADV 1YZW HIS B 169 UNP Q95W85 ARG 168 SEE REMARK 999 SEQADV 1YZW HIS B 174 UNP Q95W85 LEU 173 SEE REMARK 999 SEQADV 1YZW LEU B 202 UNP Q95W85 PRO 201 SEE REMARK 999 SEQADV 1YZW ALA C 37 UNP Q95W85 THR 36 SEE REMARK 999 SEQADV 1YZW CRU C 64 UNP Q95W85 GLU 63 CHROMOPHORE SEQADV 1YZW CRU C 64 UNP Q95W85 TYR 64 CHROMOPHORE SEQADV 1YZW CRU C 64 UNP Q95W85 GLY 65 CHROMOPHORE SEQADV 1YZW HIS C 123 UNP Q95W85 LEU 122 SEE REMARK 999 SEQADV 1YZW SER C 144 UNP Q95W85 CYS 143 SEE REMARK 999 SEQADV 1YZW HIS C 169 UNP Q95W85 ARG 168 SEE REMARK 999 SEQADV 1YZW HIS C 174 UNP Q95W85 LEU 173 SEE REMARK 999 SEQADV 1YZW LEU C 202 UNP Q95W85 PRO 201 SEE REMARK 999 SEQADV 1YZW ALA D 37 UNP Q95W85 THR 36 SEE REMARK 999 SEQADV 1YZW CRU D 64 UNP Q95W85 GLU 63 CHROMOPHORE SEQADV 1YZW CRU D 64 UNP Q95W85 TYR 64 CHROMOPHORE SEQADV 1YZW CRU D 64 UNP Q95W85 GLY 65 CHROMOPHORE SEQADV 1YZW HIS D 123 UNP Q95W85 LEU 122 SEE REMARK 999 SEQADV 1YZW SER D 144 UNP Q95W85 CYS 143 SEE REMARK 999 SEQADV 1YZW HIS D 169 UNP Q95W85 ARG 168 SEE REMARK 999 SEQADV 1YZW HIS D 174 UNP Q95W85 LEU 173 SEE REMARK 999 SEQADV 1YZW LEU D 202 UNP Q95W85 PRO 201 SEE REMARK 999 SEQRES 1 A 225 MET ALA GLY LEU LEU LYS GLU SER MET ARG ILE LYS MET SEQRES 2 A 225 TYR MET GLU GLY THR VAL ASN GLY HIS TYR PHE LYS CYS SEQRES 3 A 225 GLU GLY GLU GLY ASP GLY ASN PRO PHE ALA GLY THR GLN SEQRES 4 A 225 SER MET ARG ILE HIS VAL THR GLU GLY ALA PRO LEU PRO SEQRES 5 A 225 PHE ALA PHE ASP ILE LEU ALA PRO CYS CYS CRU SER ARG SEQRES 6 A 225 THR PHE VAL HIS HIS THR ALA GLU ILE PRO ASP PHE PHE SEQRES 7 A 225 LYS GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR SEQRES 8 A 225 THR THR TYR GLU ASP GLY GLY ILE LEU THR ALA HIS GLN SEQRES 9 A 225 ASP THR SER LEU GLU GLY ASN CYS LEU ILE TYR LYS VAL SEQRES 10 A 225 LYS VAL HIS GLY THR ASN PHE PRO ALA ASP GLY PRO VAL SEQRES 11 A 225 MET LYS ASN LYS SER GLY GLY TRP GLU PRO SER THR GLU SEQRES 12 A 225 VAL VAL TYR PRO GLU ASN GLY VAL LEU CYS GLY ARG ASN SEQRES 13 A 225 VAL MET ALA LEU LYS VAL GLY ASP ARG HIS LEU ILE CYS SEQRES 14 A 225 HIS HIS TYR THR SER TYR ARG SER LYS LYS ALA VAL ARG SEQRES 15 A 225 ALA LEU THR MET PRO GLY PHE HIS PHE THR ASP ILE ARG SEQRES 16 A 225 LEU GLN MET LEU ARG LYS LYS LYS ASP GLU TYR PHE GLU SEQRES 17 A 225 LEU TYR GLU ALA SER VAL ALA ARG TYR SER ASP LEU PRO SEQRES 18 A 225 GLU LYS ALA ASN SEQRES 1 B 225 MET ALA GLY LEU LEU LYS GLU SER MET ARG ILE LYS MET SEQRES 2 B 225 TYR MET GLU GLY THR VAL ASN GLY HIS TYR PHE LYS CYS SEQRES 3 B 225 GLU GLY GLU GLY ASP GLY ASN PRO PHE ALA GLY THR GLN SEQRES 4 B 225 SER MET ARG ILE HIS VAL THR GLU GLY ALA PRO LEU PRO SEQRES 5 B 225 PHE ALA PHE ASP ILE LEU ALA PRO CYS CYS CRU SER ARG SEQRES 6 B 225 THR PHE VAL HIS HIS THR ALA GLU ILE PRO ASP PHE PHE SEQRES 7 B 225 LYS GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR SEQRES 8 B 225 THR THR TYR GLU ASP GLY GLY ILE LEU THR ALA HIS GLN SEQRES 9 B 225 ASP THR SER LEU GLU GLY ASN CYS LEU ILE TYR LYS VAL SEQRES 10 B 225 LYS VAL HIS GLY THR ASN PHE PRO ALA ASP GLY PRO VAL SEQRES 11 B 225 MET LYS ASN LYS SER GLY GLY TRP GLU PRO SER THR GLU SEQRES 12 B 225 VAL VAL TYR PRO GLU ASN GLY VAL LEU CYS GLY ARG ASN SEQRES 13 B 225 VAL MET ALA LEU LYS VAL GLY ASP ARG HIS LEU ILE CYS SEQRES 14 B 225 HIS HIS TYR THR SER TYR ARG SER LYS LYS ALA VAL ARG SEQRES 15 B 225 ALA LEU THR MET PRO GLY PHE HIS PHE THR ASP ILE ARG SEQRES 16 B 225 LEU GLN MET LEU ARG LYS LYS LYS ASP GLU TYR PHE GLU SEQRES 17 B 225 LEU TYR GLU ALA SER VAL ALA ARG TYR SER ASP LEU PRO SEQRES 18 B 225 GLU LYS ALA ASN SEQRES 1 C 225 MET ALA GLY LEU LEU LYS GLU SER MET ARG ILE LYS MET SEQRES 2 C 225 TYR MET GLU GLY THR VAL ASN GLY HIS TYR PHE LYS CYS SEQRES 3 C 225 GLU GLY GLU GLY ASP GLY ASN PRO PHE ALA GLY THR GLN SEQRES 4 C 225 SER MET ARG ILE HIS VAL THR GLU GLY ALA PRO LEU PRO SEQRES 5 C 225 PHE ALA PHE ASP ILE LEU ALA PRO CYS CYS CRU SER ARG SEQRES 6 C 225 THR PHE VAL HIS HIS THR ALA GLU ILE PRO ASP PHE PHE SEQRES 7 C 225 LYS GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR SEQRES 8 C 225 THR THR TYR GLU ASP GLY GLY ILE LEU THR ALA HIS GLN SEQRES 9 C 225 ASP THR SER LEU GLU GLY ASN CYS LEU ILE TYR LYS VAL SEQRES 10 C 225 LYS VAL HIS GLY THR ASN PHE PRO ALA ASP GLY PRO VAL SEQRES 11 C 225 MET LYS ASN LYS SER GLY GLY TRP GLU PRO SER THR GLU SEQRES 12 C 225 VAL VAL TYR PRO GLU ASN GLY VAL LEU CYS GLY ARG ASN SEQRES 13 C 225 VAL MET ALA LEU LYS VAL GLY ASP ARG HIS LEU ILE CYS SEQRES 14 C 225 HIS HIS TYR THR SER TYR ARG SER LYS LYS ALA VAL ARG SEQRES 15 C 225 ALA LEU THR MET PRO GLY PHE HIS PHE THR ASP ILE ARG SEQRES 16 C 225 LEU GLN MET LEU ARG LYS LYS LYS ASP GLU TYR PHE GLU SEQRES 17 C 225 LEU TYR GLU ALA SER VAL ALA ARG TYR SER ASP LEU PRO SEQRES 18 C 225 GLU LYS ALA ASN SEQRES 1 D 225 MET ALA GLY LEU LEU LYS GLU SER MET ARG ILE LYS MET SEQRES 2 D 225 TYR MET GLU GLY THR VAL ASN GLY HIS TYR PHE LYS CYS SEQRES 3 D 225 GLU GLY GLU GLY ASP GLY ASN PRO PHE ALA GLY THR GLN SEQRES 4 D 225 SER MET ARG ILE HIS VAL THR GLU GLY ALA PRO LEU PRO SEQRES 5 D 225 PHE ALA PHE ASP ILE LEU ALA PRO CYS CYS CRU SER ARG SEQRES 6 D 225 THR PHE VAL HIS HIS THR ALA GLU ILE PRO ASP PHE PHE SEQRES 7 D 225 LYS GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR SEQRES 8 D 225 THR THR TYR GLU ASP GLY GLY ILE LEU THR ALA HIS GLN SEQRES 9 D 225 ASP THR SER LEU GLU GLY ASN CYS LEU ILE TYR LYS VAL SEQRES 10 D 225 LYS VAL HIS GLY THR ASN PHE PRO ALA ASP GLY PRO VAL SEQRES 11 D 225 MET LYS ASN LYS SER GLY GLY TRP GLU PRO SER THR GLU SEQRES 12 D 225 VAL VAL TYR PRO GLU ASN GLY VAL LEU CYS GLY ARG ASN SEQRES 13 D 225 VAL MET ALA LEU LYS VAL GLY ASP ARG HIS LEU ILE CYS SEQRES 14 D 225 HIS HIS TYR THR SER TYR ARG SER LYS LYS ALA VAL ARG SEQRES 15 D 225 ALA LEU THR MET PRO GLY PHE HIS PHE THR ASP ILE ARG SEQRES 16 D 225 LEU GLN MET LEU ARG LYS LYS LYS ASP GLU TYR PHE GLU SEQRES 17 D 225 LEU TYR GLU ALA SER VAL ALA ARG TYR SER ASP LEU PRO SEQRES 18 D 225 GLU LYS ALA ASN MODRES 1YZW CRU A 64 GLU MODRES 1YZW CRU A 64 TYR MODRES 1YZW CRU A 64 GLY MODRES 1YZW CRU B 64 GLU MODRES 1YZW CRU B 64 TYR MODRES 1YZW CRU B 64 GLY MODRES 1YZW CRU C 64 GLU MODRES 1YZW CRU C 64 TYR MODRES 1YZW CRU C 64 GLY MODRES 1YZW CRU D 64 GLU MODRES 1YZW CRU D 64 TYR MODRES 1YZW CRU D 64 GLY HET CRU A 64 24 HET CRU B 64 32 HET CRU C 64 32 HET CRU D 64 24 HET PEG B1001 7 HET PEG C1002 7 HETNAM CRU 4-[(4Z)-1-(CARBOXYMETHYL)-4-(4-HYDROXYBENZYLIDENE)-5- HETNAM 2 CRU OXO-4,5-DIHYDRO-1H-IMIDAZOL-2-YL]-4-IMINOBUTANOIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN CRU CHROMOPHORE (GLU-TYR-GLY) FORMUL 1 CRU 4(C16 H15 N3 O6) FORMUL 5 PEG 2(C4 H10 O3) FORMUL 7 HOH *440(H2 O) HELIX 1 1 ALA A 55 CYS A 63 5 9 HELIX 2 2 ASP A 79 SER A 84 1 6 HELIX 3 3 ALA A 183 LEU A 187 5 5 HELIX 4 4 ALA B 55 CYS B 63 5 9 HELIX 5 5 ASP B 79 SER B 84 1 6 HELIX 6 6 ALA B 183 LEU B 187 5 5 HELIX 7 7 ALA C 55 CYS C 63 5 9 HELIX 8 8 ASP C 79 SER C 84 1 6 HELIX 9 9 GLY C 131 ASN C 136 1 6 HELIX 10 10 ALA C 183 LEU C 187 5 5 HELIX 11 11 ALA D 55 CYS D 63 5 9 HELIX 12 12 PHE D 81 PHE D 85 5 5 HELIX 13 13 ALA D 183 LEU D 187 5 5 SHEET 1 A13 HIS A 72 HIS A 73 0 SHEET 2 A13 TYR A 209 ARG A 219 1 O SER A 216 N HIS A 72 SHEET 3 A13 HIS A 193 LYS A 205 -1 N GLN A 200 O TYR A 213 SHEET 4 A13 SER A 144 GLU A 151 -1 N GLU A 146 O THR A 195 SHEET 5 A13 VAL A 154 VAL A 165 -1 O CYS A 156 N TYR A 149 SHEET 6 A13 ARG A 168 SER A 180 -1 O LEU A 170 N LEU A 163 SHEET 7 A13 PHE A 89 TYR A 97 -1 N THR A 90 O ARG A 179 SHEET 8 A13 ILE A 102 GLU A 112 -1 O LEU A 103 N THR A 95 SHEET 9 A13 CYS A 115 THR A 125 -1 O ILE A 117 N SER A 110 SHEET 10 A13 MET A 10 VAL A 20 1 N LYS A 13 O TYR A 118 SHEET 11 A13 HIS A 23 ASN A 34 -1 O GLY A 29 N MET A 14 SHEET 12 A13 THR A 39 GLU A 48 -1 O ARG A 43 N GLU A 30 SHEET 13 A13 TYR A 209 ARG A 219 -1 O PHE A 210 N ILE A 44 SHEET 1 B13 HIS B 72 HIS B 73 0 SHEET 2 B13 TYR B 209 ARG B 219 1 O SER B 216 N HIS B 72 SHEET 3 B13 HIS B 193 LYS B 205 -1 N PHE B 194 O ARG B 219 SHEET 4 B13 SER B 144 GLU B 151 -1 N GLU B 146 O THR B 195 SHEET 5 B13 VAL B 154 VAL B 165 -1 O ARG B 158 N VAL B 147 SHEET 6 B13 ARG B 168 SER B 180 -1 O TYR B 178 N LEU B 155 SHEET 7 B13 PHE B 89 TYR B 97 -1 N THR B 90 O ARG B 179 SHEET 8 B13 ILE B 102 GLU B 112 -1 O THR B 109 N PHE B 89 SHEET 9 B13 CYS B 115 THR B 125 -1 O LYS B 121 N HIS B 106 SHEET 10 B13 MET B 10 VAL B 20 1 N THR B 19 O GLY B 124 SHEET 11 B13 HIS B 23 ASN B 34 -1 O CYS B 27 N MET B 16 SHEET 12 B13 THR B 39 GLU B 48 -1 O HIS B 45 N GLU B 28 SHEET 13 B13 TYR B 209 ARG B 219 -1 O LEU B 212 N MET B 42 SHEET 1 C13 HIS C 72 HIS C 73 0 SHEET 2 C13 TYR C 209 ARG C 219 1 O SER C 216 N HIS C 72 SHEET 3 C13 HIS C 193 LYS C 205 -1 N PHE C 194 O ARG C 219 SHEET 4 C13 SER C 144 GLU C 151 -1 N SER C 144 O ILE C 197 SHEET 5 C13 VAL C 154 VAL C 165 -1 O ARG C 158 N VAL C 147 SHEET 6 C13 ARG C 168 SER C 180 -1 O TYR C 178 N LEU C 155 SHEET 7 C13 PHE C 89 TYR C 97 -1 N THR C 90 O ARG C 179 SHEET 8 C13 ILE C 102 GLU C 112 -1 O THR C 109 N PHE C 89 SHEET 9 C13 CYS C 115 THR C 125 -1 O CYS C 115 N GLU C 112 SHEET 10 C13 MET C 10 VAL C 20 1 N THR C 19 O GLY C 124 SHEET 11 C13 HIS C 23 ASN C 34 -1 O CYS C 27 N MET C 16 SHEET 12 C13 THR C 39 GLU C 48 -1 O ARG C 43 N GLU C 30 SHEET 13 C13 TYR C 209 ARG C 219 -1 O PHE C 210 N ILE C 44 SHEET 1 D13 HIS D 72 HIS D 73 0 SHEET 2 D13 TYR D 209 ARG D 219 1 O ALA D 218 N HIS D 72 SHEET 3 D13 HIS D 193 LYS D 205 -1 N GLN D 200 O TYR D 213 SHEET 4 D13 SER D 144 GLU D 151 -1 N GLU D 146 O THR D 195 SHEET 5 D13 VAL D 154 VAL D 165 -1 O ARG D 158 N VAL D 147 SHEET 6 D13 ARG D 168 SER D 180 -1 O LEU D 170 N LEU D 163 SHEET 7 D13 PHE D 89 TYR D 97 -1 N THR D 90 O ARG D 179 SHEET 8 D13 ILE D 102 GLU D 112 -1 O THR D 109 N PHE D 89 SHEET 9 D13 CYS D 115 THR D 125 -1 O ILE D 117 N SER D 110 SHEET 10 D13 MET D 10 VAL D 20 1 N TYR D 15 O VAL D 120 SHEET 11 D13 HIS D 23 ASN D 34 -1 O CYS D 27 N MET D 16 SHEET 12 D13 THR D 39 GLU D 48 -1 O ARG D 43 N GLU D 30 SHEET 13 D13 TYR D 209 ARG D 219 -1 O PHE D 210 N ILE D 44 LINK C CYS A 63 N1 CRU A 64 1555 1555 1.26 LINK C3 CRU A 64 N SER A 67 1555 1555 1.34 LINK C CYS B 63 N1 CRU B 64 1555 1555 1.27 LINK C3 CRU B 64 N SER B 67 1555 1555 1.35 LINK C CYS C 63 N1 CRU C 64 1555 1555 1.27 LINK C3 CRU C 64 N SER C 67 1555 1555 1.34 LINK C CYS D 63 N1 CRU D 64 1555 1555 1.27 LINK C3 CRU D 64 N SER D 67 1555 1555 1.34 CISPEP 1 ALA A 50 PRO A 51 0 -3.60 CISPEP 2 PHE A 85 PRO A 86 0 6.51 CISPEP 3 ALA B 50 PRO B 51 0 2.19 CISPEP 4 PHE B 85 PRO B 86 0 9.89 CISPEP 5 ALA C 50 PRO C 51 0 -3.53 CISPEP 6 PHE C 85 PRO C 86 0 10.03 CISPEP 7 ALA D 50 PRO D 51 0 -4.75 CISPEP 8 PHE D 85 PRO D 86 0 6.16 SITE 1 AC1 5 ASP B 99 GLY B 100 ASN B 126 GLU C 98 SITE 2 AC1 5 TYR D 175 SITE 1 AC2 4 GLU C 92 THR C 94 HIS C 106 HOH C1049 CRYST1 76.221 120.733 118.469 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013120 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008283 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008441 0.00000