data_1Z0D # _entry.id 1Z0D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Z0D pdb_00001z0d 10.2210/pdb1z0d/pdb RCSB RCSB032138 ? ? WWPDB D_1000032138 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_ref_seq_dif.details' 30 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Z0D _pdbx_database_status.recvd_initial_deposition_date 2005-03-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eathiraj, S.' 1 'Pan, X.' 2 'Ritacco, C.' 3 'Lambright, D.G.' 4 # _citation.id primary _citation.title 'Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.' _citation.journal_abbrev Nature _citation.journal_volume 436 _citation.page_first 415 _citation.page_last 419 _citation.year 2005 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16034420 _citation.pdbx_database_id_DOI 10.1038/nature03798 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Eathiraj, S.' 1 ? primary 'Pan, X.' 2 ? primary 'Ritacco, C.' 3 ? primary 'Lambright, D.G.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-5C' 18500.102 2 ? Q80L 'GTPase domain' ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 5 water nat water 18.015 409 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQA AIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFM AIAKKLP ; _entity_poly.pdbx_seq_one_letter_code_can ;GSICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQA AIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFM AIAKKLP ; _entity_poly.pdbx_strand_id A,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'MAGNESIUM ION' MG 4 "GUANOSINE-5'-DIPHOSPHATE" GDP 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ILE n 1 4 CYS n 1 5 GLN n 1 6 PHE n 1 7 LYS n 1 8 LEU n 1 9 VAL n 1 10 LEU n 1 11 LEU n 1 12 GLY n 1 13 GLU n 1 14 SER n 1 15 ALA n 1 16 VAL n 1 17 GLY n 1 18 LYS n 1 19 SER n 1 20 SER n 1 21 LEU n 1 22 VAL n 1 23 LEU n 1 24 ARG n 1 25 PHE n 1 26 VAL n 1 27 LYS n 1 28 GLY n 1 29 GLN n 1 30 PHE n 1 31 HIS n 1 32 GLU n 1 33 TYR n 1 34 GLN n 1 35 GLU n 1 36 SER n 1 37 THR n 1 38 ILE n 1 39 GLY n 1 40 ALA n 1 41 ALA n 1 42 PHE n 1 43 LEU n 1 44 THR n 1 45 GLN n 1 46 THR n 1 47 VAL n 1 48 CYS n 1 49 LEU n 1 50 ASP n 1 51 ASP n 1 52 THR n 1 53 THR n 1 54 VAL n 1 55 LYS n 1 56 PHE n 1 57 GLU n 1 58 ILE n 1 59 TRP n 1 60 ASP n 1 61 THR n 1 62 ALA n 1 63 GLY n 1 64 LEU n 1 65 GLU n 1 66 ARG n 1 67 TYR n 1 68 HIS n 1 69 SER n 1 70 LEU n 1 71 ALA n 1 72 PRO n 1 73 MET n 1 74 TYR n 1 75 TYR n 1 76 ARG n 1 77 GLY n 1 78 ALA n 1 79 GLN n 1 80 ALA n 1 81 ALA n 1 82 ILE n 1 83 VAL n 1 84 VAL n 1 85 TYR n 1 86 ASP n 1 87 ILE n 1 88 THR n 1 89 ASN n 1 90 THR n 1 91 ASP n 1 92 THR n 1 93 PHE n 1 94 ALA n 1 95 ARG n 1 96 ALA n 1 97 LYS n 1 98 ASN n 1 99 TRP n 1 100 VAL n 1 101 LYS n 1 102 GLU n 1 103 LEU n 1 104 GLN n 1 105 ARG n 1 106 GLN n 1 107 ALA n 1 108 SER n 1 109 PRO n 1 110 ASN n 1 111 ILE n 1 112 VAL n 1 113 ILE n 1 114 ALA n 1 115 LEU n 1 116 ALA n 1 117 GLY n 1 118 ASN n 1 119 LYS n 1 120 ALA n 1 121 ASP n 1 122 LEU n 1 123 ALA n 1 124 SER n 1 125 LYS n 1 126 ARG n 1 127 ALA n 1 128 VAL n 1 129 GLU n 1 130 PHE n 1 131 GLN n 1 132 GLU n 1 133 ALA n 1 134 GLN n 1 135 ALA n 1 136 TYR n 1 137 ALA n 1 138 ASP n 1 139 ASP n 1 140 ASN n 1 141 SER n 1 142 LEU n 1 143 LEU n 1 144 PHE n 1 145 MET n 1 146 GLU n 1 147 THR n 1 148 SER n 1 149 ALA n 1 150 LYS n 1 151 THR n 1 152 ALA n 1 153 MET n 1 154 ASN n 1 155 VAL n 1 156 ASN n 1 157 GLU n 1 158 ILE n 1 159 PHE n 1 160 MET n 1 161 ALA n 1 162 ILE n 1 163 ALA n 1 164 LYS n 1 165 LYS n 1 166 LEU n 1 167 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Rab5c _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) Codon Plus-RIL Cells' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type 'GST fusion, pGEX' _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX4T1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 17 ? ? ? A . n A 1 2 SER 2 18 ? ? ? A . n A 1 3 ILE 3 19 19 ILE ALA A . n A 1 4 CYS 4 20 20 CYS CYS A . n A 1 5 GLN 5 21 21 GLN GLN A . n A 1 6 PHE 6 22 22 PHE PHE A . n A 1 7 LYS 7 23 23 LYS LYS A . n A 1 8 LEU 8 24 24 LEU LEU A . n A 1 9 VAL 9 25 25 VAL VAL A . n A 1 10 LEU 10 26 26 LEU LEU A . n A 1 11 LEU 11 27 27 LEU LEU A . n A 1 12 GLY 12 28 28 GLY GLY A . n A 1 13 GLU 13 29 29 GLU GLU A . n A 1 14 SER 14 30 30 SER SER A . n A 1 15 ALA 15 31 31 ALA ALA A . n A 1 16 VAL 16 32 32 VAL VAL A . n A 1 17 GLY 17 33 33 GLY GLY A . n A 1 18 LYS 18 34 34 LYS LYS A . n A 1 19 SER 19 35 35 SER SER A . n A 1 20 SER 20 36 36 SER SER A . n A 1 21 LEU 21 37 37 LEU LEU A . n A 1 22 VAL 22 38 38 VAL VAL A . n A 1 23 LEU 23 39 39 LEU LEU A . n A 1 24 ARG 24 40 40 ARG ARG A . n A 1 25 PHE 25 41 41 PHE PHE A . n A 1 26 VAL 26 42 42 VAL VAL A . n A 1 27 LYS 27 43 43 LYS LYS A . n A 1 28 GLY 28 44 44 GLY GLY A . n A 1 29 GLN 29 45 45 GLN GLN A . n A 1 30 PHE 30 46 46 PHE PHE A . n A 1 31 HIS 31 47 47 HIS HIS A . n A 1 32 GLU 32 48 48 GLU GLU A . n A 1 33 TYR 33 49 49 TYR TYR A . n A 1 34 GLN 34 50 50 GLN GLN A . n A 1 35 GLU 35 51 51 GLU GLU A . n A 1 36 SER 36 52 52 SER SER A . n A 1 37 THR 37 53 53 THR THR A . n A 1 38 ILE 38 54 54 ILE ILE A . n A 1 39 GLY 39 55 55 GLY GLY A . n A 1 40 ALA 40 56 56 ALA ALA A . n A 1 41 ALA 41 57 57 ALA ALA A . n A 1 42 PHE 42 58 58 PHE PHE A . n A 1 43 LEU 43 59 59 LEU LEU A . n A 1 44 THR 44 60 60 THR THR A . n A 1 45 GLN 45 61 61 GLN GLN A . n A 1 46 THR 46 62 62 THR THR A . n A 1 47 VAL 47 63 63 VAL VAL A . n A 1 48 CYS 48 64 64 CYS CYS A . n A 1 49 LEU 49 65 65 LEU LEU A . n A 1 50 ASP 50 66 66 ASP ALA A . n A 1 51 ASP 51 67 67 ASP ALA A . n A 1 52 THR 52 68 68 THR THR A . n A 1 53 THR 53 69 69 THR THR A . n A 1 54 VAL 54 70 70 VAL VAL A . n A 1 55 LYS 55 71 71 LYS LYS A . n A 1 56 PHE 56 72 72 PHE PHE A . n A 1 57 GLU 57 73 73 GLU GLU A . n A 1 58 ILE 58 74 74 ILE ILE A . n A 1 59 TRP 59 75 75 TRP TRP A . n A 1 60 ASP 60 76 76 ASP ASP A . n A 1 61 THR 61 77 77 THR THR A . n A 1 62 ALA 62 78 78 ALA ALA A . n A 1 63 GLY 63 79 79 GLY GLY A . n A 1 64 LEU 64 80 80 LEU LEU A . n A 1 65 GLU 65 81 81 GLU GLU A . n A 1 66 ARG 66 82 82 ARG ARG A . n A 1 67 TYR 67 83 83 TYR TYR A . n A 1 68 HIS 68 84 84 HIS HIS A . n A 1 69 SER 69 85 85 SER SER A . n A 1 70 LEU 70 86 86 LEU LEU A . n A 1 71 ALA 71 87 87 ALA ALA A . n A 1 72 PRO 72 88 88 PRO PRO A . n A 1 73 MET 73 89 89 MET MET A . n A 1 74 TYR 74 90 90 TYR TYR A . n A 1 75 TYR 75 91 91 TYR TYR A . n A 1 76 ARG 76 92 92 ARG ARG A . n A 1 77 GLY 77 93 93 GLY GLY A . n A 1 78 ALA 78 94 94 ALA ALA A . n A 1 79 GLN 79 95 95 GLN GLN A . n A 1 80 ALA 80 96 96 ALA ALA A . n A 1 81 ALA 81 97 97 ALA ALA A . n A 1 82 ILE 82 98 98 ILE ILE A . n A 1 83 VAL 83 99 99 VAL VAL A . n A 1 84 VAL 84 100 100 VAL VAL A . n A 1 85 TYR 85 101 101 TYR TYR A . n A 1 86 ASP 86 102 102 ASP ASP A . n A 1 87 ILE 87 103 103 ILE ILE A . n A 1 88 THR 88 104 104 THR THR A . n A 1 89 ASN 89 105 105 ASN ASN A . n A 1 90 THR 90 106 106 THR THR A . n A 1 91 ASP 91 107 107 ASP ASP A . n A 1 92 THR 92 108 108 THR THR A . n A 1 93 PHE 93 109 109 PHE PHE A . n A 1 94 ALA 94 110 110 ALA ALA A . n A 1 95 ARG 95 111 111 ARG ARG A . n A 1 96 ALA 96 112 112 ALA ALA A . n A 1 97 LYS 97 113 113 LYS LYS A . n A 1 98 ASN 98 114 114 ASN ASN A . n A 1 99 TRP 99 115 115 TRP TRP A . n A 1 100 VAL 100 116 116 VAL VAL A . n A 1 101 LYS 101 117 117 LYS LYS A . n A 1 102 GLU 102 118 118 GLU GLU A . n A 1 103 LEU 103 119 119 LEU LEU A . n A 1 104 GLN 104 120 120 GLN GLN A . n A 1 105 ARG 105 121 121 ARG ARG A . n A 1 106 GLN 106 122 122 GLN GLN A . n A 1 107 ALA 107 123 123 ALA ALA A . n A 1 108 SER 108 124 124 SER SER A . n A 1 109 PRO 109 125 125 PRO PRO A . n A 1 110 ASN 110 126 126 ASN ASN A . n A 1 111 ILE 111 127 127 ILE ILE A . n A 1 112 VAL 112 128 128 VAL VAL A . n A 1 113 ILE 113 129 129 ILE ILE A . n A 1 114 ALA 114 130 130 ALA ALA A . n A 1 115 LEU 115 131 131 LEU LEU A . n A 1 116 ALA 116 132 132 ALA ALA A . n A 1 117 GLY 117 133 133 GLY GLY A . n A 1 118 ASN 118 134 134 ASN ASN A . n A 1 119 LYS 119 135 135 LYS LYS A . n A 1 120 ALA 120 136 136 ALA ALA A . n A 1 121 ASP 121 137 137 ASP ASP A . n A 1 122 LEU 122 138 138 LEU LEU A . n A 1 123 ALA 123 139 139 ALA ALA A . n A 1 124 SER 124 140 140 SER SER A . n A 1 125 LYS 125 141 141 LYS LYS A . n A 1 126 ARG 126 142 142 ARG ARG A . n A 1 127 ALA 127 143 143 ALA ALA A . n A 1 128 VAL 128 144 144 VAL VAL A . n A 1 129 GLU 129 145 145 GLU GLU A . n A 1 130 PHE 130 146 146 PHE PHE A . n A 1 131 GLN 131 147 147 GLN GLN A . n A 1 132 GLU 132 148 148 GLU GLU A . n A 1 133 ALA 133 149 149 ALA ALA A . n A 1 134 GLN 134 150 150 GLN GLN A . n A 1 135 ALA 135 151 151 ALA ALA A . n A 1 136 TYR 136 152 152 TYR TYR A . n A 1 137 ALA 137 153 153 ALA ALA A . n A 1 138 ASP 138 154 154 ASP ASP A . n A 1 139 ASP 139 155 155 ASP ASP A . n A 1 140 ASN 140 156 156 ASN ASN A . n A 1 141 SER 141 157 157 SER SER A . n A 1 142 LEU 142 158 158 LEU LEU A . n A 1 143 LEU 143 159 159 LEU LEU A . n A 1 144 PHE 144 160 160 PHE PHE A . n A 1 145 MET 145 161 161 MET MET A . n A 1 146 GLU 146 162 162 GLU GLU A . n A 1 147 THR 147 163 163 THR THR A . n A 1 148 SER 148 164 164 SER SER A . n A 1 149 ALA 149 165 165 ALA ALA A . n A 1 150 LYS 150 166 166 LYS LYS A . n A 1 151 THR 151 167 167 THR THR A . n A 1 152 ALA 152 168 168 ALA ALA A . n A 1 153 MET 153 169 169 MET MET A . n A 1 154 ASN 154 170 170 ASN ASN A . n A 1 155 VAL 155 171 171 VAL VAL A . n A 1 156 ASN 156 172 172 ASN ASN A . n A 1 157 GLU 157 173 173 GLU GLU A . n A 1 158 ILE 158 174 174 ILE ILE A . n A 1 159 PHE 159 175 175 PHE PHE A . n A 1 160 MET 160 176 176 MET MET A . n A 1 161 ALA 161 177 177 ALA ALA A . n A 1 162 ILE 162 178 178 ILE ILE A . n A 1 163 ALA 163 179 179 ALA ALA A . n A 1 164 LYS 164 180 180 LYS LYS A . n A 1 165 LYS 165 181 181 LYS ALA A . n A 1 166 LEU 166 182 182 LEU LEU A . n A 1 167 PRO 167 183 183 PRO PRO A . n B 1 1 GLY 1 17 ? ? ? C . n B 1 2 SER 2 18 ? ? ? C . n B 1 3 ILE 3 19 19 ILE ALA C . n B 1 4 CYS 4 20 20 CYS CYS C . n B 1 5 GLN 5 21 21 GLN GLN C . n B 1 6 PHE 6 22 22 PHE PHE C . n B 1 7 LYS 7 23 23 LYS LYS C . n B 1 8 LEU 8 24 24 LEU LEU C . n B 1 9 VAL 9 25 25 VAL VAL C . n B 1 10 LEU 10 26 26 LEU LEU C . n B 1 11 LEU 11 27 27 LEU LEU C . n B 1 12 GLY 12 28 28 GLY GLY C . n B 1 13 GLU 13 29 29 GLU GLU C . n B 1 14 SER 14 30 30 SER SER C . n B 1 15 ALA 15 31 31 ALA ALA C . n B 1 16 VAL 16 32 32 VAL VAL C . n B 1 17 GLY 17 33 33 GLY GLY C . n B 1 18 LYS 18 34 34 LYS LYS C . n B 1 19 SER 19 35 35 SER SER C . n B 1 20 SER 20 36 36 SER SER C . n B 1 21 LEU 21 37 37 LEU LEU C . n B 1 22 VAL 22 38 38 VAL VAL C . n B 1 23 LEU 23 39 39 LEU LEU C . n B 1 24 ARG 24 40 40 ARG ARG C . n B 1 25 PHE 25 41 41 PHE PHE C . n B 1 26 VAL 26 42 42 VAL VAL C . n B 1 27 LYS 27 43 43 LYS LYS C . n B 1 28 GLY 28 44 44 GLY GLY C . n B 1 29 GLN 29 45 45 GLN GLN C . n B 1 30 PHE 30 46 46 PHE PHE C . n B 1 31 HIS 31 47 47 HIS HIS C . n B 1 32 GLU 32 48 48 GLU ALA C . n B 1 33 TYR 33 49 49 TYR ALA C . n B 1 34 GLN 34 50 50 GLN ALA C . n B 1 35 GLU 35 51 51 GLU ALA C . n B 1 36 SER 36 52 52 SER ALA C . n B 1 37 THR 37 53 53 THR THR C . n B 1 38 ILE 38 54 54 ILE ILE C . n B 1 39 GLY 39 55 55 GLY GLY C . n B 1 40 ALA 40 56 56 ALA ALA C . n B 1 41 ALA 41 57 57 ALA ALA C . n B 1 42 PHE 42 58 58 PHE PHE C . n B 1 43 LEU 43 59 59 LEU LEU C . n B 1 44 THR 44 60 60 THR THR C . n B 1 45 GLN 45 61 61 GLN GLN C . n B 1 46 THR 46 62 62 THR THR C . n B 1 47 VAL 47 63 63 VAL VAL C . n B 1 48 CYS 48 64 64 CYS CYS C . n B 1 49 LEU 49 65 65 LEU LEU C . n B 1 50 ASP 50 66 66 ASP ALA C . n B 1 51 ASP 51 67 67 ASP ALA C . n B 1 52 THR 52 68 68 THR THR C . n B 1 53 THR 53 69 69 THR THR C . n B 1 54 VAL 54 70 70 VAL VAL C . n B 1 55 LYS 55 71 71 LYS ALA C . n B 1 56 PHE 56 72 72 PHE PHE C . n B 1 57 GLU 57 73 73 GLU GLU C . n B 1 58 ILE 58 74 74 ILE ILE C . n B 1 59 TRP 59 75 75 TRP TRP C . n B 1 60 ASP 60 76 76 ASP ASP C . n B 1 61 THR 61 77 77 THR THR C . n B 1 62 ALA 62 78 78 ALA ALA C . n B 1 63 GLY 63 79 79 GLY GLY C . n B 1 64 LEU 64 80 80 LEU LEU C . n B 1 65 GLU 65 81 81 GLU GLU C . n B 1 66 ARG 66 82 82 ARG ALA C . n B 1 67 TYR 67 83 83 TYR TYR C . n B 1 68 HIS 68 84 84 HIS HIS C . n B 1 69 SER 69 85 85 SER SER C . n B 1 70 LEU 70 86 86 LEU LEU C . n B 1 71 ALA 71 87 87 ALA ALA C . n B 1 72 PRO 72 88 88 PRO PRO C . n B 1 73 MET 73 89 89 MET MET C . n B 1 74 TYR 74 90 90 TYR TYR C . n B 1 75 TYR 75 91 91 TYR TYR C . n B 1 76 ARG 76 92 92 ARG ARG C . n B 1 77 GLY 77 93 93 GLY GLY C . n B 1 78 ALA 78 94 94 ALA ALA C . n B 1 79 GLN 79 95 95 GLN GLN C . n B 1 80 ALA 80 96 96 ALA ALA C . n B 1 81 ALA 81 97 97 ALA ALA C . n B 1 82 ILE 82 98 98 ILE ILE C . n B 1 83 VAL 83 99 99 VAL VAL C . n B 1 84 VAL 84 100 100 VAL VAL C . n B 1 85 TYR 85 101 101 TYR TYR C . n B 1 86 ASP 86 102 102 ASP ASP C . n B 1 87 ILE 87 103 103 ILE ILE C . n B 1 88 THR 88 104 104 THR THR C . n B 1 89 ASN 89 105 105 ASN ASN C . n B 1 90 THR 90 106 106 THR THR C . n B 1 91 ASP 91 107 107 ASP ASP C . n B 1 92 THR 92 108 108 THR THR C . n B 1 93 PHE 93 109 109 PHE PHE C . n B 1 94 ALA 94 110 110 ALA ALA C . n B 1 95 ARG 95 111 111 ARG ALA C . n B 1 96 ALA 96 112 112 ALA ALA C . n B 1 97 LYS 97 113 113 LYS LYS C . n B 1 98 ASN 98 114 114 ASN ASN C . n B 1 99 TRP 99 115 115 TRP TRP C . n B 1 100 VAL 100 116 116 VAL VAL C . n B 1 101 LYS 101 117 117 LYS ALA C . n B 1 102 GLU 102 118 118 GLU GLU C . n B 1 103 LEU 103 119 119 LEU LEU C . n B 1 104 GLN 104 120 120 GLN GLN C . n B 1 105 ARG 105 121 121 ARG ALA C . n B 1 106 GLN 106 122 122 GLN ALA C . n B 1 107 ALA 107 123 123 ALA ALA C . n B 1 108 SER 108 124 124 SER SER C . n B 1 109 PRO 109 125 125 PRO PRO C . n B 1 110 ASN 110 126 126 ASN ASN C . n B 1 111 ILE 111 127 127 ILE ILE C . n B 1 112 VAL 112 128 128 VAL VAL C . n B 1 113 ILE 113 129 129 ILE ILE C . n B 1 114 ALA 114 130 130 ALA ALA C . n B 1 115 LEU 115 131 131 LEU LEU C . n B 1 116 ALA 116 132 132 ALA ALA C . n B 1 117 GLY 117 133 133 GLY GLY C . n B 1 118 ASN 118 134 134 ASN ASN C . n B 1 119 LYS 119 135 135 LYS LYS C . n B 1 120 ALA 120 136 136 ALA ALA C . n B 1 121 ASP 121 137 137 ASP ASP C . n B 1 122 LEU 122 138 138 LEU LEU C . n B 1 123 ALA 123 139 139 ALA ALA C . n B 1 124 SER 124 140 140 SER SER C . n B 1 125 LYS 125 141 141 LYS LYS C . n B 1 126 ARG 126 142 142 ARG ARG C . n B 1 127 ALA 127 143 143 ALA ALA C . n B 1 128 VAL 128 144 144 VAL VAL C . n B 1 129 GLU 129 145 145 GLU GLU C . n B 1 130 PHE 130 146 146 PHE PHE C . n B 1 131 GLN 131 147 147 GLN ALA C . n B 1 132 GLU 132 148 148 GLU GLU C . n B 1 133 ALA 133 149 149 ALA ALA C . n B 1 134 GLN 134 150 150 GLN GLN C . n B 1 135 ALA 135 151 151 ALA ALA C . n B 1 136 TYR 136 152 152 TYR TYR C . n B 1 137 ALA 137 153 153 ALA ALA C . n B 1 138 ASP 138 154 154 ASP ASP C . n B 1 139 ASP 139 155 155 ASP ASP C . n B 1 140 ASN 140 156 156 ASN ASN C . n B 1 141 SER 141 157 157 SER SER C . n B 1 142 LEU 142 158 158 LEU LEU C . n B 1 143 LEU 143 159 159 LEU LEU C . n B 1 144 PHE 144 160 160 PHE PHE C . n B 1 145 MET 145 161 161 MET MET C . n B 1 146 GLU 146 162 162 GLU GLU C . n B 1 147 THR 147 163 163 THR THR C . n B 1 148 SER 148 164 164 SER SER C . n B 1 149 ALA 149 165 165 ALA ALA C . n B 1 150 LYS 150 166 166 LYS LYS C . n B 1 151 THR 151 167 167 THR THR C . n B 1 152 ALA 152 168 168 ALA ALA C . n B 1 153 MET 153 169 169 MET MET C . n B 1 154 ASN 154 170 170 ASN ASN C . n B 1 155 VAL 155 171 171 VAL VAL C . n B 1 156 ASN 156 172 172 ASN ASN C . n B 1 157 GLU 157 173 173 GLU GLU C . n B 1 158 ILE 158 174 174 ILE ILE C . n B 1 159 PHE 159 175 175 PHE PHE C . n B 1 160 MET 160 176 176 MET MET C . n B 1 161 ALA 161 177 177 ALA ALA C . n B 1 162 ILE 162 178 178 ILE ILE C . n B 1 163 ALA 163 179 179 ALA ALA C . n B 1 164 LYS 164 180 180 LYS LYS C . n B 1 165 LYS 165 181 181 LYS LYS C . n B 1 166 LEU 166 182 182 LEU LEU C . n B 1 167 PRO 167 183 183 PRO PRO C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 1 600 200 PO4 PO4 A . D 3 MG 1 601 300 MG MG A . E 4 GDP 1 700 200 GDP GDP A . F 3 MG 1 800 300 MG MG C . G 4 GDP 1 900 200 GDP GDP C . H 5 HOH 1 701 1 HOH HOH A . H 5 HOH 2 702 3 HOH HOH A . H 5 HOH 3 703 4 HOH HOH A . H 5 HOH 4 704 5 HOH HOH A . H 5 HOH 5 705 6 HOH HOH A . H 5 HOH 6 706 7 HOH HOH A . H 5 HOH 7 707 8 HOH HOH A . H 5 HOH 8 708 9 HOH HOH A . H 5 HOH 9 709 10 HOH HOH A . H 5 HOH 10 710 11 HOH HOH A . H 5 HOH 11 711 13 HOH HOH A . H 5 HOH 12 712 15 HOH HOH A . H 5 HOH 13 713 16 HOH HOH A . H 5 HOH 14 714 18 HOH HOH A . H 5 HOH 15 715 19 HOH HOH A . H 5 HOH 16 716 22 HOH HOH A . H 5 HOH 17 717 23 HOH HOH A . H 5 HOH 18 718 24 HOH HOH A . H 5 HOH 19 719 25 HOH HOH A . H 5 HOH 20 720 26 HOH HOH A . H 5 HOH 21 721 28 HOH HOH A . H 5 HOH 22 722 29 HOH HOH A . H 5 HOH 23 723 32 HOH HOH A . H 5 HOH 24 724 33 HOH HOH A . H 5 HOH 25 725 35 HOH HOH A . H 5 HOH 26 726 36 HOH HOH A . H 5 HOH 27 727 37 HOH HOH A . H 5 HOH 28 728 39 HOH HOH A . H 5 HOH 29 729 40 HOH HOH A . H 5 HOH 30 730 41 HOH HOH A . H 5 HOH 31 731 42 HOH HOH A . H 5 HOH 32 732 43 HOH HOH A . H 5 HOH 33 733 44 HOH HOH A . H 5 HOH 34 734 49 HOH HOH A . H 5 HOH 35 735 50 HOH HOH A . H 5 HOH 36 736 51 HOH HOH A . H 5 HOH 37 737 52 HOH HOH A . H 5 HOH 38 738 53 HOH HOH A . H 5 HOH 39 739 57 HOH HOH A . H 5 HOH 40 740 58 HOH HOH A . H 5 HOH 41 741 63 HOH HOH A . H 5 HOH 42 742 68 HOH HOH A . H 5 HOH 43 743 70 HOH HOH A . H 5 HOH 44 744 72 HOH HOH A . H 5 HOH 45 745 75 HOH HOH A . H 5 HOH 46 746 77 HOH HOH A . H 5 HOH 47 747 78 HOH HOH A . H 5 HOH 48 748 79 HOH HOH A . H 5 HOH 49 749 80 HOH HOH A . H 5 HOH 50 750 83 HOH HOH A . H 5 HOH 51 751 84 HOH HOH A . H 5 HOH 52 752 85 HOH HOH A . H 5 HOH 53 753 87 HOH HOH A . H 5 HOH 54 754 88 HOH HOH A . H 5 HOH 55 755 89 HOH HOH A . H 5 HOH 56 756 90 HOH HOH A . H 5 HOH 57 757 91 HOH HOH A . H 5 HOH 58 758 92 HOH HOH A . H 5 HOH 59 759 93 HOH HOH A . H 5 HOH 60 760 94 HOH HOH A . H 5 HOH 61 761 96 HOH HOH A . H 5 HOH 62 762 97 HOH HOH A . H 5 HOH 63 763 98 HOH HOH A . H 5 HOH 64 764 103 HOH HOH A . H 5 HOH 65 765 106 HOH HOH A . H 5 HOH 66 766 108 HOH HOH A . H 5 HOH 67 767 111 HOH HOH A . H 5 HOH 68 768 112 HOH HOH A . H 5 HOH 69 769 115 HOH HOH A . H 5 HOH 70 770 116 HOH HOH A . H 5 HOH 71 771 117 HOH HOH A . H 5 HOH 72 772 118 HOH HOH A . H 5 HOH 73 773 119 HOH HOH A . H 5 HOH 74 774 123 HOH HOH A . H 5 HOH 75 775 124 HOH HOH A . H 5 HOH 76 776 125 HOH HOH A . H 5 HOH 77 777 126 HOH HOH A . H 5 HOH 78 778 127 HOH HOH A . H 5 HOH 79 779 128 HOH HOH A . H 5 HOH 80 780 130 HOH HOH A . H 5 HOH 81 781 131 HOH HOH A . H 5 HOH 82 782 134 HOH HOH A . H 5 HOH 83 783 136 HOH HOH A . H 5 HOH 84 784 137 HOH HOH A . H 5 HOH 85 785 139 HOH HOH A . H 5 HOH 86 786 140 HOH HOH A . H 5 HOH 87 787 141 HOH HOH A . H 5 HOH 88 788 143 HOH HOH A . H 5 HOH 89 789 149 HOH HOH A . H 5 HOH 90 790 152 HOH HOH A . H 5 HOH 91 791 154 HOH HOH A . H 5 HOH 92 792 157 HOH HOH A . H 5 HOH 93 793 158 HOH HOH A . H 5 HOH 94 794 159 HOH HOH A . H 5 HOH 95 795 161 HOH HOH A . H 5 HOH 96 796 162 HOH HOH A . H 5 HOH 97 797 164 HOH HOH A . H 5 HOH 98 798 165 HOH HOH A . H 5 HOH 99 799 169 HOH HOH A . H 5 HOH 100 800 170 HOH HOH A . H 5 HOH 101 801 172 HOH HOH A . H 5 HOH 102 802 173 HOH HOH A . H 5 HOH 103 803 174 HOH HOH A . H 5 HOH 104 804 175 HOH HOH A . H 5 HOH 105 805 176 HOH HOH A . H 5 HOH 106 806 177 HOH HOH A . H 5 HOH 107 807 181 HOH HOH A . H 5 HOH 108 808 183 HOH HOH A . H 5 HOH 109 809 184 HOH HOH A . H 5 HOH 110 810 185 HOH HOH A . H 5 HOH 111 811 186 HOH HOH A . H 5 HOH 112 812 187 HOH HOH A . H 5 HOH 113 813 191 HOH HOH A . H 5 HOH 114 814 192 HOH HOH A . H 5 HOH 115 815 194 HOH HOH A . H 5 HOH 116 816 196 HOH HOH A . H 5 HOH 117 817 199 HOH HOH A . H 5 HOH 118 818 201 HOH HOH A . H 5 HOH 119 819 204 HOH HOH A . H 5 HOH 120 820 205 HOH HOH A . H 5 HOH 121 821 206 HOH HOH A . H 5 HOH 122 822 208 HOH HOH A . H 5 HOH 123 823 209 HOH HOH A . H 5 HOH 124 824 210 HOH HOH A . H 5 HOH 125 825 211 HOH HOH A . H 5 HOH 126 826 212 HOH HOH A . H 5 HOH 127 827 215 HOH HOH A . H 5 HOH 128 828 217 HOH HOH A . H 5 HOH 129 829 218 HOH HOH A . H 5 HOH 130 830 220 HOH HOH A . H 5 HOH 131 831 221 HOH HOH A . H 5 HOH 132 832 222 HOH HOH A . H 5 HOH 133 833 223 HOH HOH A . H 5 HOH 134 834 225 HOH HOH A . H 5 HOH 135 835 226 HOH HOH A . H 5 HOH 136 836 227 HOH HOH A . H 5 HOH 137 837 229 HOH HOH A . H 5 HOH 138 838 231 HOH HOH A . H 5 HOH 139 839 232 HOH HOH A . H 5 HOH 140 840 235 HOH HOH A . H 5 HOH 141 841 238 HOH HOH A . H 5 HOH 142 842 239 HOH HOH A . H 5 HOH 143 843 241 HOH HOH A . H 5 HOH 144 844 243 HOH HOH A . H 5 HOH 145 845 245 HOH HOH A . H 5 HOH 146 846 247 HOH HOH A . H 5 HOH 147 847 248 HOH HOH A . H 5 HOH 148 848 249 HOH HOH A . H 5 HOH 149 849 250 HOH HOH A . H 5 HOH 150 850 252 HOH HOH A . H 5 HOH 151 851 253 HOH HOH A . H 5 HOH 152 852 254 HOH HOH A . H 5 HOH 153 853 255 HOH HOH A . H 5 HOH 154 854 256 HOH HOH A . H 5 HOH 155 855 258 HOH HOH A . H 5 HOH 156 856 259 HOH HOH A . H 5 HOH 157 857 260 HOH HOH A . H 5 HOH 158 858 263 HOH HOH A . H 5 HOH 159 859 265 HOH HOH A . H 5 HOH 160 860 268 HOH HOH A . H 5 HOH 161 861 270 HOH HOH A . H 5 HOH 162 862 271 HOH HOH A . H 5 HOH 163 863 274 HOH HOH A . H 5 HOH 164 864 275 HOH HOH A . H 5 HOH 165 865 278 HOH HOH A . H 5 HOH 166 866 280 HOH HOH A . H 5 HOH 167 867 282 HOH HOH A . H 5 HOH 168 868 287 HOH HOH A . H 5 HOH 169 869 290 HOH HOH A . H 5 HOH 170 870 294 HOH HOH A . H 5 HOH 171 871 296 HOH HOH A . H 5 HOH 172 872 297 HOH HOH A . H 5 HOH 173 873 299 HOH HOH A . H 5 HOH 174 874 300 HOH HOH A . H 5 HOH 175 875 302 HOH HOH A . H 5 HOH 176 876 304 HOH HOH A . H 5 HOH 177 877 306 HOH HOH A . H 5 HOH 178 878 307 HOH HOH A . H 5 HOH 179 879 309 HOH HOH A . H 5 HOH 180 880 310 HOH HOH A . H 5 HOH 181 881 311 HOH HOH A . H 5 HOH 182 882 312 HOH HOH A . H 5 HOH 183 883 313 HOH HOH A . H 5 HOH 184 884 314 HOH HOH A . H 5 HOH 185 885 317 HOH HOH A . H 5 HOH 186 886 318 HOH HOH A . H 5 HOH 187 887 319 HOH HOH A . H 5 HOH 188 888 321 HOH HOH A . H 5 HOH 189 889 325 HOH HOH A . H 5 HOH 190 890 326 HOH HOH A . H 5 HOH 191 891 327 HOH HOH A . H 5 HOH 192 892 329 HOH HOH A . H 5 HOH 193 893 330 HOH HOH A . H 5 HOH 194 894 335 HOH HOH A . H 5 HOH 195 895 336 HOH HOH A . H 5 HOH 196 896 337 HOH HOH A . H 5 HOH 197 897 338 HOH HOH A . H 5 HOH 198 898 339 HOH HOH A . H 5 HOH 199 899 341 HOH HOH A . H 5 HOH 200 900 342 HOH HOH A . H 5 HOH 201 901 343 HOH HOH A . H 5 HOH 202 902 344 HOH HOH A . H 5 HOH 203 903 345 HOH HOH A . H 5 HOH 204 904 346 HOH HOH A . H 5 HOH 205 905 347 HOH HOH A . H 5 HOH 206 906 348 HOH HOH A . H 5 HOH 207 907 349 HOH HOH A . H 5 HOH 208 908 350 HOH HOH A . H 5 HOH 209 909 352 HOH HOH A . H 5 HOH 210 910 353 HOH HOH A . H 5 HOH 211 911 357 HOH HOH A . H 5 HOH 212 912 360 HOH HOH A . H 5 HOH 213 913 367 HOH HOH A . H 5 HOH 214 914 393 HOH HOH A . H 5 HOH 215 915 394 HOH HOH A . H 5 HOH 216 916 408 HOH HOH A . H 5 HOH 217 917 410 HOH HOH A . H 5 HOH 218 918 412 HOH HOH A . H 5 HOH 219 919 415 HOH HOH A . H 5 HOH 220 920 422 HOH HOH A . H 5 HOH 221 921 423 HOH HOH A . H 5 HOH 222 922 424 HOH HOH A . H 5 HOH 223 923 427 HOH HOH A . H 5 HOH 224 924 444 HOH HOH A . H 5 HOH 225 925 453 HOH HOH A . H 5 HOH 226 926 455 HOH HOH A . H 5 HOH 227 927 474 HOH HOH A . H 5 HOH 228 928 477 HOH HOH A . H 5 HOH 229 929 491 HOH HOH A . H 5 HOH 230 930 492 HOH HOH A . H 5 HOH 231 931 494 HOH HOH A . H 5 HOH 232 932 496 HOH HOH A . H 5 HOH 233 933 497 HOH HOH A . H 5 HOH 234 934 498 HOH HOH A . H 5 HOH 235 935 502 HOH HOH A . H 5 HOH 236 936 507 HOH HOH A . H 5 HOH 237 937 509 HOH HOH A . H 5 HOH 238 938 513 HOH HOH A . H 5 HOH 239 939 518 HOH HOH A . H 5 HOH 240 940 521 HOH HOH A . I 5 HOH 1 901 12 HOH HOH C . I 5 HOH 2 902 14 HOH HOH C . I 5 HOH 3 903 17 HOH HOH C . I 5 HOH 4 904 20 HOH HOH C . I 5 HOH 5 905 21 HOH HOH C . I 5 HOH 6 906 30 HOH HOH C . I 5 HOH 7 907 31 HOH HOH C . I 5 HOH 8 908 34 HOH HOH C . I 5 HOH 9 909 38 HOH HOH C . I 5 HOH 10 910 45 HOH HOH C . I 5 HOH 11 911 46 HOH HOH C . I 5 HOH 12 912 47 HOH HOH C . I 5 HOH 13 913 48 HOH HOH C . I 5 HOH 14 914 54 HOH HOH C . I 5 HOH 15 915 56 HOH HOH C . I 5 HOH 16 916 59 HOH HOH C . I 5 HOH 17 917 60 HOH HOH C . I 5 HOH 18 918 61 HOH HOH C . I 5 HOH 19 919 64 HOH HOH C . I 5 HOH 20 920 65 HOH HOH C . I 5 HOH 21 921 66 HOH HOH C . I 5 HOH 22 922 67 HOH HOH C . I 5 HOH 23 923 69 HOH HOH C . I 5 HOH 24 924 71 HOH HOH C . I 5 HOH 25 925 73 HOH HOH C . I 5 HOH 26 926 74 HOH HOH C . I 5 HOH 27 927 76 HOH HOH C . I 5 HOH 28 928 81 HOH HOH C . I 5 HOH 29 929 82 HOH HOH C . I 5 HOH 30 930 86 HOH HOH C . I 5 HOH 31 931 95 HOH HOH C . I 5 HOH 32 932 99 HOH HOH C . I 5 HOH 33 933 100 HOH HOH C . I 5 HOH 34 934 102 HOH HOH C . I 5 HOH 35 935 104 HOH HOH C . I 5 HOH 36 936 105 HOH HOH C . I 5 HOH 37 937 107 HOH HOH C . I 5 HOH 38 938 109 HOH HOH C . I 5 HOH 39 939 110 HOH HOH C . I 5 HOH 40 940 113 HOH HOH C . I 5 HOH 41 941 114 HOH HOH C . I 5 HOH 42 942 120 HOH HOH C . I 5 HOH 43 943 121 HOH HOH C . I 5 HOH 44 944 122 HOH HOH C . I 5 HOH 45 945 129 HOH HOH C . I 5 HOH 46 946 132 HOH HOH C . I 5 HOH 47 947 133 HOH HOH C . I 5 HOH 48 948 135 HOH HOH C . I 5 HOH 49 949 138 HOH HOH C . I 5 HOH 50 950 142 HOH HOH C . I 5 HOH 51 951 145 HOH HOH C . I 5 HOH 52 952 146 HOH HOH C . I 5 HOH 53 953 147 HOH HOH C . I 5 HOH 54 954 150 HOH HOH C . I 5 HOH 55 955 151 HOH HOH C . I 5 HOH 56 956 153 HOH HOH C . I 5 HOH 57 957 155 HOH HOH C . I 5 HOH 58 958 156 HOH HOH C . I 5 HOH 59 959 160 HOH HOH C . I 5 HOH 60 960 163 HOH HOH C . I 5 HOH 61 961 166 HOH HOH C . I 5 HOH 62 962 167 HOH HOH C . I 5 HOH 63 963 168 HOH HOH C . I 5 HOH 64 964 171 HOH HOH C . I 5 HOH 65 965 178 HOH HOH C . I 5 HOH 66 966 179 HOH HOH C . I 5 HOH 67 967 180 HOH HOH C . I 5 HOH 68 968 182 HOH HOH C . I 5 HOH 69 969 188 HOH HOH C . I 5 HOH 70 970 189 HOH HOH C . I 5 HOH 71 971 190 HOH HOH C . I 5 HOH 72 972 193 HOH HOH C . I 5 HOH 73 973 195 HOH HOH C . I 5 HOH 74 974 197 HOH HOH C . I 5 HOH 75 975 198 HOH HOH C . I 5 HOH 76 976 200 HOH HOH C . I 5 HOH 77 977 202 HOH HOH C . I 5 HOH 78 978 207 HOH HOH C . I 5 HOH 79 979 213 HOH HOH C . I 5 HOH 80 980 214 HOH HOH C . I 5 HOH 81 981 219 HOH HOH C . I 5 HOH 82 982 224 HOH HOH C . I 5 HOH 83 983 228 HOH HOH C . I 5 HOH 84 984 230 HOH HOH C . I 5 HOH 85 985 234 HOH HOH C . I 5 HOH 86 986 236 HOH HOH C . I 5 HOH 87 987 237 HOH HOH C . I 5 HOH 88 988 240 HOH HOH C . I 5 HOH 89 989 242 HOH HOH C . I 5 HOH 90 990 244 HOH HOH C . I 5 HOH 91 991 246 HOH HOH C . I 5 HOH 92 992 251 HOH HOH C . I 5 HOH 93 993 257 HOH HOH C . I 5 HOH 94 994 261 HOH HOH C . I 5 HOH 95 995 262 HOH HOH C . I 5 HOH 96 996 264 HOH HOH C . I 5 HOH 97 997 266 HOH HOH C . I 5 HOH 98 998 267 HOH HOH C . I 5 HOH 99 999 272 HOH HOH C . I 5 HOH 100 1000 273 HOH HOH C . I 5 HOH 101 1001 276 HOH HOH C . I 5 HOH 102 1002 277 HOH HOH C . I 5 HOH 103 1003 279 HOH HOH C . I 5 HOH 104 1004 281 HOH HOH C . I 5 HOH 105 1005 283 HOH HOH C . I 5 HOH 106 1006 284 HOH HOH C . I 5 HOH 107 1007 285 HOH HOH C . I 5 HOH 108 1008 286 HOH HOH C . I 5 HOH 109 1009 288 HOH HOH C . I 5 HOH 110 1010 289 HOH HOH C . I 5 HOH 111 1011 291 HOH HOH C . I 5 HOH 112 1012 292 HOH HOH C . I 5 HOH 113 1013 301 HOH HOH C . I 5 HOH 114 1014 303 HOH HOH C . I 5 HOH 115 1015 305 HOH HOH C . I 5 HOH 116 1016 308 HOH HOH C . I 5 HOH 117 1017 315 HOH HOH C . I 5 HOH 118 1018 316 HOH HOH C . I 5 HOH 119 1019 320 HOH HOH C . I 5 HOH 120 1020 322 HOH HOH C . I 5 HOH 121 1021 328 HOH HOH C . I 5 HOH 122 1022 331 HOH HOH C . I 5 HOH 123 1023 334 HOH HOH C . I 5 HOH 124 1024 340 HOH HOH C . I 5 HOH 125 1025 354 HOH HOH C . I 5 HOH 126 1026 356 HOH HOH C . I 5 HOH 127 1027 361 HOH HOH C . I 5 HOH 128 1028 362 HOH HOH C . I 5 HOH 129 1029 365 HOH HOH C . I 5 HOH 130 1030 366 HOH HOH C . I 5 HOH 131 1031 370 HOH HOH C . I 5 HOH 132 1032 372 HOH HOH C . I 5 HOH 133 1033 373 HOH HOH C . I 5 HOH 134 1034 395 HOH HOH C . I 5 HOH 135 1035 396 HOH HOH C . I 5 HOH 136 1036 398 HOH HOH C . I 5 HOH 137 1037 400 HOH HOH C . I 5 HOH 138 1038 401 HOH HOH C . I 5 HOH 139 1039 403 HOH HOH C . I 5 HOH 140 1040 409 HOH HOH C . I 5 HOH 141 1041 411 HOH HOH C . I 5 HOH 142 1042 414 HOH HOH C . I 5 HOH 143 1043 417 HOH HOH C . I 5 HOH 144 1044 418 HOH HOH C . I 5 HOH 145 1045 421 HOH HOH C . I 5 HOH 146 1046 425 HOH HOH C . I 5 HOH 147 1047 426 HOH HOH C . I 5 HOH 148 1048 432 HOH HOH C . I 5 HOH 149 1049 442 HOH HOH C . I 5 HOH 150 1050 445 HOH HOH C . I 5 HOH 151 1051 446 HOH HOH C . I 5 HOH 152 1052 449 HOH HOH C . I 5 HOH 153 1053 450 HOH HOH C . I 5 HOH 154 1054 454 HOH HOH C . I 5 HOH 155 1055 457 HOH HOH C . I 5 HOH 156 1056 465 HOH HOH C . I 5 HOH 157 1057 468 HOH HOH C . I 5 HOH 158 1058 469 HOH HOH C . I 5 HOH 159 1059 472 HOH HOH C . I 5 HOH 160 1060 473 HOH HOH C . I 5 HOH 161 1061 476 HOH HOH C . I 5 HOH 162 1062 478 HOH HOH C . I 5 HOH 163 1063 483 HOH HOH C . I 5 HOH 164 1064 485 HOH HOH C . I 5 HOH 165 1065 506 HOH HOH C . I 5 HOH 166 1066 516 HOH HOH C . I 5 HOH 167 1067 519 HOH HOH C . I 5 HOH 168 1068 522 HOH HOH C . I 5 HOH 169 1069 526 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 19 ? CG1 ? A ILE 3 CG1 2 1 Y 1 A ILE 19 ? CG2 ? A ILE 3 CG2 3 1 Y 1 A ILE 19 ? CD1 ? A ILE 3 CD1 4 1 Y 1 A ASP 66 ? CG ? A ASP 50 CG 5 1 Y 1 A ASP 66 ? OD1 ? A ASP 50 OD1 6 1 Y 1 A ASP 66 ? OD2 ? A ASP 50 OD2 7 1 Y 1 A ASP 67 ? CG ? A ASP 51 CG 8 1 Y 1 A ASP 67 ? OD1 ? A ASP 51 OD1 9 1 Y 1 A ASP 67 ? OD2 ? A ASP 51 OD2 10 1 Y 1 A LYS 181 ? CG ? A LYS 165 CG 11 1 Y 1 A LYS 181 ? CD ? A LYS 165 CD 12 1 Y 1 A LYS 181 ? CE ? A LYS 165 CE 13 1 Y 1 A LYS 181 ? NZ ? A LYS 165 NZ 14 1 Y 1 C ILE 19 ? CG1 ? B ILE 3 CG1 15 1 Y 1 C ILE 19 ? CG2 ? B ILE 3 CG2 16 1 Y 1 C ILE 19 ? CD1 ? B ILE 3 CD1 17 1 Y 1 C GLU 48 ? CG ? B GLU 32 CG 18 1 Y 1 C GLU 48 ? CD ? B GLU 32 CD 19 1 Y 1 C GLU 48 ? OE1 ? B GLU 32 OE1 20 1 Y 1 C GLU 48 ? OE2 ? B GLU 32 OE2 21 1 Y 1 C TYR 49 ? CG ? B TYR 33 CG 22 1 Y 1 C TYR 49 ? CD1 ? B TYR 33 CD1 23 1 Y 1 C TYR 49 ? CD2 ? B TYR 33 CD2 24 1 Y 1 C TYR 49 ? CE1 ? B TYR 33 CE1 25 1 Y 1 C TYR 49 ? CE2 ? B TYR 33 CE2 26 1 Y 1 C TYR 49 ? CZ ? B TYR 33 CZ 27 1 Y 1 C TYR 49 ? OH ? B TYR 33 OH 28 1 Y 1 C GLN 50 ? CG ? B GLN 34 CG 29 1 Y 1 C GLN 50 ? CD ? B GLN 34 CD 30 1 Y 1 C GLN 50 ? OE1 ? B GLN 34 OE1 31 1 Y 1 C GLN 50 ? NE2 ? B GLN 34 NE2 32 1 Y 1 C GLU 51 ? CG ? B GLU 35 CG 33 1 Y 1 C GLU 51 ? CD ? B GLU 35 CD 34 1 Y 1 C GLU 51 ? OE1 ? B GLU 35 OE1 35 1 Y 1 C GLU 51 ? OE2 ? B GLU 35 OE2 36 1 Y 1 C SER 52 ? OG ? B SER 36 OG 37 1 Y 1 C ASP 66 ? CG ? B ASP 50 CG 38 1 Y 1 C ASP 66 ? OD1 ? B ASP 50 OD1 39 1 Y 1 C ASP 66 ? OD2 ? B ASP 50 OD2 40 1 Y 1 C ASP 67 ? CG ? B ASP 51 CG 41 1 Y 1 C ASP 67 ? OD1 ? B ASP 51 OD1 42 1 Y 1 C ASP 67 ? OD2 ? B ASP 51 OD2 43 1 Y 1 C LYS 71 ? CG ? B LYS 55 CG 44 1 Y 1 C LYS 71 ? CD ? B LYS 55 CD 45 1 Y 1 C LYS 71 ? CE ? B LYS 55 CE 46 1 Y 1 C LYS 71 ? NZ ? B LYS 55 NZ 47 1 Y 1 C ARG 82 ? CG ? B ARG 66 CG 48 1 Y 1 C ARG 82 ? CD ? B ARG 66 CD 49 1 Y 1 C ARG 82 ? NE ? B ARG 66 NE 50 1 Y 1 C ARG 82 ? CZ ? B ARG 66 CZ 51 1 Y 1 C ARG 82 ? NH1 ? B ARG 66 NH1 52 1 Y 1 C ARG 82 ? NH2 ? B ARG 66 NH2 53 1 Y 1 C ARG 111 ? CG ? B ARG 95 CG 54 1 Y 1 C ARG 111 ? CD ? B ARG 95 CD 55 1 Y 1 C ARG 111 ? NE ? B ARG 95 NE 56 1 Y 1 C ARG 111 ? CZ ? B ARG 95 CZ 57 1 Y 1 C ARG 111 ? NH1 ? B ARG 95 NH1 58 1 Y 1 C ARG 111 ? NH2 ? B ARG 95 NH2 59 1 Y 1 C LYS 117 ? CG ? B LYS 101 CG 60 1 Y 1 C LYS 117 ? CD ? B LYS 101 CD 61 1 Y 1 C LYS 117 ? CE ? B LYS 101 CE 62 1 Y 1 C LYS 117 ? NZ ? B LYS 101 NZ 63 1 Y 1 C ARG 121 ? CG ? B ARG 105 CG 64 1 Y 1 C ARG 121 ? CD ? B ARG 105 CD 65 1 Y 1 C ARG 121 ? NE ? B ARG 105 NE 66 1 Y 1 C ARG 121 ? CZ ? B ARG 105 CZ 67 1 Y 1 C ARG 121 ? NH1 ? B ARG 105 NH1 68 1 Y 1 C ARG 121 ? NH2 ? B ARG 105 NH2 69 1 Y 1 C GLN 122 ? CG ? B GLN 106 CG 70 1 Y 1 C GLN 122 ? CD ? B GLN 106 CD 71 1 Y 1 C GLN 122 ? OE1 ? B GLN 106 OE1 72 1 Y 1 C GLN 122 ? NE2 ? B GLN 106 NE2 73 1 Y 1 C GLN 147 ? CG ? B GLN 131 CG 74 1 Y 1 C GLN 147 ? CD ? B GLN 131 CD 75 1 Y 1 C GLN 147 ? OE1 ? B GLN 131 OE1 76 1 Y 1 C GLN 147 ? NE2 ? B GLN 131 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _cell.entry_id 1Z0D _cell.length_a 38.401 _cell.length_b 70.931 _cell.length_c 137.610 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z0D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1Z0D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_percent_sol 52.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '10% PEG 4000, 200mM Lithium Sulfate, 50mM Na acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2004-08-04 _diffrn_detector.details 'Osmic mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1Z0D _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 19641 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.088 _reflns.pdbx_netI_over_sigmaI 17 _reflns.B_iso_Wilson_estimate 37.5 _reflns.pdbx_redundancy 5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.26 _reflns_shell.percent_possible_all 97.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.407 _reflns_shell.meanI_over_sigI_obs 4.0 _reflns_shell.pdbx_redundancy 5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1609 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1Z0D _refine.ls_number_reflns_obs 18123 _refine.ls_number_reflns_all 19641 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 98.54 _refine.ls_R_factor_obs 0.18913 _refine.ls_R_factor_all 0.201 _refine.ls_R_factor_R_work 0.18609 _refine.ls_R_factor_R_free 0.24685 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 983 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.B_iso_mean 28.211 _refine.aniso_B[1][1] -0.66 _refine.aniso_B[2][2] 1.28 _refine.aniso_B[3][3] -0.62 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'Polyalanine Rab3A GTPase' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.290 _refine.pdbx_overall_ESU_R_Free 0.225 _refine.overall_SU_ML 0.144 _refine.overall_SU_B 5.505 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2504 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 409 _refine_hist.number_atoms_total 2976 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 2613 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.112 1.969 ? 3560 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.370 5.000 ? 328 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.358 24.762 ? 105 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.870 15.000 ? 415 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.077 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.069 0.200 ? 416 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1919 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.189 0.200 ? 1349 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.297 0.200 ? 1809 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.132 0.200 ? 415 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.176 0.200 ? 69 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.111 0.200 ? 41 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.459 1.500 ? 1672 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.825 2.000 ? 2607 'X-RAY DIFFRACTION' ? r_scbond_it 1.046 3.000 ? 1088 'X-RAY DIFFRACTION' ? r_scangle_it 1.758 4.500 ? 953 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.253 _refine_ls_shell.number_reflns_R_work 1272 _refine_ls_shell.R_factor_R_work 0.204 _refine_ls_shell.percent_reflns_obs 97.52 _refine_ls_shell.R_factor_R_free 0.368 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1Z0D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1Z0D _struct.title 'GDP-Bound Rab5c GTPase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Z0D _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'Rab GTPase, Rab5c, vesicular trafficking, protein transport' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB5C_MOUSE _struct_ref.pdbx_db_accession P35278 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAI VVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI AKKLP ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1Z0D A 3 ? 167 ? P35278 19 ? 183 ? 19 183 2 1 1Z0D C 3 ? 167 ? P35278 19 ? 183 ? 19 183 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1Z0D GLY A 1 ? UNP P35278 ? ? 'cloning artifact' 17 1 1 1Z0D SER A 2 ? UNP P35278 ? ? 'cloning artifact' 18 2 1 1Z0D LEU A 64 ? UNP P35278 GLN 80 'engineered mutation' 80 3 2 1Z0D GLY C 1 ? UNP P35278 ? ? 'cloning artifact' 17 4 2 1Z0D SER C 2 ? UNP P35278 ? ? 'cloning artifact' 18 5 2 1Z0D LEU C 64 ? UNP P35278 GLN 80 'engineered mutation' 80 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,H 2 1 B,F,G,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 17 ? GLY A 28 ? GLY A 33 GLY A 44 1 ? 12 HELX_P HELX_P2 2 TYR A 67 ? LEU A 70 ? TYR A 83 LEU A 86 5 ? 4 HELX_P HELX_P3 3 ALA A 71 ? ARG A 76 ? ALA A 87 ARG A 92 1 ? 6 HELX_P HELX_P4 4 ASN A 89 ? ALA A 107 ? ASN A 105 ALA A 123 1 ? 19 HELX_P HELX_P5 5 LYS A 119 ? ARG A 126 ? LYS A 135 ARG A 142 5 ? 8 HELX_P HELX_P6 6 GLU A 129 ? ASN A 140 ? GLU A 145 ASN A 156 1 ? 12 HELX_P HELX_P7 7 ASN A 154 ? LEU A 166 ? ASN A 170 LEU A 182 1 ? 13 HELX_P HELX_P8 8 GLY B 17 ? GLY B 28 ? GLY C 33 GLY C 44 1 ? 12 HELX_P HELX_P9 9 GLY B 63 ? SER B 69 ? GLY C 79 SER C 85 5 ? 7 HELX_P HELX_P10 10 LEU B 70 ? ARG B 76 ? LEU C 86 ARG C 92 1 ? 7 HELX_P HELX_P11 11 ASN B 89 ? ALA B 107 ? ASN C 105 ALA C 123 1 ? 19 HELX_P HELX_P12 12 LYS B 119 ? ARG B 126 ? LYS C 135 ARG C 142 5 ? 8 HELX_P HELX_P13 13 GLU B 129 ? ASN B 140 ? GLU C 145 ASN C 156 1 ? 12 HELX_P HELX_P14 14 ASN B 154 ? LEU B 166 ? ASN C 170 LEU C 182 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 19 OG ? ? ? 1_555 D MG . MG ? ? A SER 35 A MG 601 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc2 metalc ? ? D MG . MG ? ? ? 1_555 E GDP . O2B ? ? A MG 601 A GDP 700 1_555 ? ? ? ? ? ? ? 2.193 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 601 A HOH 706 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 601 A HOH 709 1_555 ? ? ? ? ? ? ? 2.221 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 601 A HOH 718 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 601 A HOH 724 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc7 metalc ? ? B SER 19 OG ? ? ? 1_555 F MG . MG ? ? C SER 35 C MG 800 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc8 metalc ? ? F MG . MG ? ? ? 1_555 G GDP . O2B ? ? C MG 800 C GDP 900 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc9 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? C MG 800 C HOH 907 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc10 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? C MG 800 C HOH 913 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc11 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? C MG 800 C HOH 916 1_555 ? ? ? ? ? ? ? 2.015 ? ? metalc12 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? C MG 800 C HOH 923 1_555 ? ? ? ? ? ? ? 2.007 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 19 ? A SER 35 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O2B ? E GDP . ? A GDP 700 ? 1_555 86.0 ? 2 OG ? A SER 19 ? A SER 35 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 706 ? 1_555 170.0 ? 3 O2B ? E GDP . ? A GDP 700 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 706 ? 1_555 88.9 ? 4 OG ? A SER 19 ? A SER 35 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 709 ? 1_555 79.8 ? 5 O2B ? E GDP . ? A GDP 700 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 709 ? 1_555 90.7 ? 6 O ? H HOH . ? A HOH 706 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 709 ? 1_555 91.7 ? 7 OG ? A SER 19 ? A SER 35 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 718 ? 1_555 92.4 ? 8 O2B ? E GDP . ? A GDP 700 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 718 ? 1_555 91.9 ? 9 O ? H HOH . ? A HOH 706 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 718 ? 1_555 96.4 ? 10 O ? H HOH . ? A HOH 709 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 718 ? 1_555 171.6 ? 11 OG ? A SER 19 ? A SER 35 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 724 ? 1_555 85.8 ? 12 O2B ? E GDP . ? A GDP 700 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 724 ? 1_555 171.3 ? 13 O ? H HOH . ? A HOH 706 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 724 ? 1_555 98.8 ? 14 O ? H HOH . ? A HOH 709 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 724 ? 1_555 85.0 ? 15 O ? H HOH . ? A HOH 718 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? H HOH . ? A HOH 724 ? 1_555 91.4 ? 16 OG ? B SER 19 ? C SER 35 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O2B ? G GDP . ? C GDP 900 ? 1_555 87.5 ? 17 OG ? B SER 19 ? C SER 35 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 907 ? 1_555 85.1 ? 18 O2B ? G GDP . ? C GDP 900 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 907 ? 1_555 83.2 ? 19 OG ? B SER 19 ? C SER 35 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 913 ? 1_555 84.6 ? 20 O2B ? G GDP . ? C GDP 900 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 913 ? 1_555 165.4 ? 21 O ? I HOH . ? C HOH 907 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 913 ? 1_555 83.9 ? 22 OG ? B SER 19 ? C SER 35 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 916 ? 1_555 175.4 ? 23 O2B ? G GDP . ? C GDP 900 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 916 ? 1_555 93.1 ? 24 O ? I HOH . ? C HOH 907 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 916 ? 1_555 90.5 ? 25 O ? I HOH . ? C HOH 913 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 916 ? 1_555 93.9 ? 26 OG ? B SER 19 ? C SER 35 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 923 ? 1_555 83.1 ? 27 O2B ? G GDP . ? C GDP 900 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 923 ? 1_555 97.1 ? 28 O ? I HOH . ? C HOH 907 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 923 ? 1_555 168.2 ? 29 O ? I HOH . ? C HOH 913 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 923 ? 1_555 94.1 ? 30 O ? I HOH . ? C HOH 916 ? 1_555 MG ? F MG . ? C MG 800 ? 1_555 O ? I HOH . ? C HOH 923 ? 1_555 101.3 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 39 ? LEU A 49 ? GLY A 55 LEU A 65 A 2 THR A 52 ? ALA A 62 ? THR A 68 ALA A 78 A 3 CYS A 4 ? LEU A 11 ? CYS A 20 LEU A 27 A 4 ALA A 80 ? ASP A 86 ? ALA A 96 ASP A 102 A 5 VAL A 112 ? ASN A 118 ? VAL A 128 ASN A 134 A 6 LEU A 143 ? GLU A 146 ? LEU A 159 GLU A 162 B 1 ALA B 40 ? LEU B 49 ? ALA C 56 LEU C 65 B 2 THR B 52 ? THR B 61 ? THR C 68 THR C 77 B 3 CYS B 4 ? LEU B 11 ? CYS C 20 LEU C 27 B 4 ALA B 80 ? ASP B 86 ? ALA C 96 ASP C 102 B 5 VAL B 112 ? ASN B 118 ? VAL C 128 ASN C 134 B 6 LEU B 143 ? GLU B 146 ? LEU C 159 GLU C 162 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 43 ? N LEU A 59 O ILE A 58 ? O ILE A 74 A 2 3 O THR A 53 ? O THR A 69 N CYS A 4 ? N CYS A 20 A 3 4 N LEU A 11 ? N LEU A 27 O VAL A 84 ? O VAL A 100 A 4 5 N ALA A 81 ? N ALA A 97 O ALA A 114 ? O ALA A 130 A 5 6 N LEU A 115 ? N LEU A 131 O LEU A 143 ? O LEU A 159 B 1 2 N LEU B 43 ? N LEU C 59 O ILE B 58 ? O ILE C 74 B 2 3 O LYS B 55 ? O LYS C 71 N CYS B 4 ? N CYS C 20 B 3 4 N LEU B 11 ? N LEU C 27 O VAL B 84 ? O VAL C 100 B 4 5 N TYR B 85 ? N TYR C 101 O ASN B 118 ? O ASN C 134 B 5 6 N LEU B 115 ? N LEU C 131 O LEU B 143 ? O LEU C 159 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 600 ? 12 'BINDING SITE FOR RESIDUE PO4 A 600' AC2 Software A MG 601 ? 6 'BINDING SITE FOR RESIDUE MG A 601' AC3 Software C MG 800 ? 6 'BINDING SITE FOR RESIDUE MG C 800' AC4 Software A GDP 700 ? 25 'BINDING SITE FOR RESIDUE GDP A 700' AC5 Software C GDP 900 ? 22 'BINDING SITE FOR RESIDUE GDP C 900' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 SER A 14 ? SER A 30 . ? 1_555 ? 2 AC1 12 LYS A 18 ? LYS A 34 . ? 1_555 ? 3 AC1 12 ALA A 62 ? ALA A 78 . ? 1_555 ? 4 AC1 12 GLY A 63 ? GLY A 79 . ? 1_555 ? 5 AC1 12 LEU A 64 ? LEU A 80 . ? 1_555 ? 6 AC1 12 GLU A 65 ? GLU A 81 . ? 1_555 ? 7 AC1 12 HOH H . ? HOH A 702 . ? 1_555 ? 8 AC1 12 HOH H . ? HOH A 703 . ? 1_555 ? 9 AC1 12 HOH H . ? HOH A 704 . ? 1_555 ? 10 AC1 12 HOH H . ? HOH A 706 . ? 1_555 ? 11 AC1 12 HOH H . ? HOH A 760 . ? 1_555 ? 12 AC1 12 ASN B 156 ? ASN C 172 . ? 1_555 ? 13 AC2 6 SER A 19 ? SER A 35 . ? 1_555 ? 14 AC2 6 GDP E . ? GDP A 700 . ? 1_555 ? 15 AC2 6 HOH H . ? HOH A 706 . ? 1_555 ? 16 AC2 6 HOH H . ? HOH A 709 . ? 1_555 ? 17 AC2 6 HOH H . ? HOH A 718 . ? 1_555 ? 18 AC2 6 HOH H . ? HOH A 724 . ? 1_555 ? 19 AC3 6 SER B 19 ? SER C 35 . ? 1_555 ? 20 AC3 6 GDP G . ? GDP C 900 . ? 1_555 ? 21 AC3 6 HOH I . ? HOH C 907 . ? 1_555 ? 22 AC3 6 HOH I . ? HOH C 913 . ? 1_555 ? 23 AC3 6 HOH I . ? HOH C 916 . ? 1_555 ? 24 AC3 6 HOH I . ? HOH C 923 . ? 1_555 ? 25 AC4 25 ALA A 15 ? ALA A 31 . ? 1_555 ? 26 AC4 25 VAL A 16 ? VAL A 32 . ? 1_555 ? 27 AC4 25 GLY A 17 ? GLY A 33 . ? 1_555 ? 28 AC4 25 LYS A 18 ? LYS A 34 . ? 1_555 ? 29 AC4 25 SER A 19 ? SER A 35 . ? 1_555 ? 30 AC4 25 SER A 20 ? SER A 36 . ? 1_555 ? 31 AC4 25 PHE A 30 ? PHE A 46 . ? 1_555 ? 32 AC4 25 HIS A 31 ? HIS A 47 . ? 1_555 ? 33 AC4 25 GLU A 32 ? GLU A 48 . ? 1_555 ? 34 AC4 25 GLN A 34 ? GLN A 50 . ? 1_555 ? 35 AC4 25 ASN A 118 ? ASN A 134 . ? 1_555 ? 36 AC4 25 LYS A 119 ? LYS A 135 . ? 1_555 ? 37 AC4 25 ASP A 121 ? ASP A 137 . ? 1_555 ? 38 AC4 25 LEU A 122 ? LEU A 138 . ? 1_555 ? 39 AC4 25 SER A 148 ? SER A 164 . ? 1_555 ? 40 AC4 25 ALA A 149 ? ALA A 165 . ? 1_555 ? 41 AC4 25 LYS A 150 ? LYS A 166 . ? 1_555 ? 42 AC4 25 MG D . ? MG A 601 . ? 1_555 ? 43 AC4 25 HOH H . ? HOH A 706 . ? 1_555 ? 44 AC4 25 HOH H . ? HOH A 708 . ? 1_555 ? 45 AC4 25 HOH H . ? HOH A 716 . ? 1_555 ? 46 AC4 25 HOH H . ? HOH A 718 . ? 1_555 ? 47 AC4 25 HOH H . ? HOH A 736 . ? 1_555 ? 48 AC4 25 HOH H . ? HOH A 752 . ? 1_555 ? 49 AC4 25 THR B 151 ? THR C 167 . ? 1_555 ? 50 AC5 22 ALA B 15 ? ALA C 31 . ? 1_555 ? 51 AC5 22 VAL B 16 ? VAL C 32 . ? 1_555 ? 52 AC5 22 GLY B 17 ? GLY C 33 . ? 1_555 ? 53 AC5 22 LYS B 18 ? LYS C 34 . ? 1_555 ? 54 AC5 22 SER B 19 ? SER C 35 . ? 1_555 ? 55 AC5 22 SER B 20 ? SER C 36 . ? 1_555 ? 56 AC5 22 PHE B 30 ? PHE C 46 . ? 1_555 ? 57 AC5 22 GLU B 32 ? GLU C 48 . ? 1_555 ? 58 AC5 22 ASN B 118 ? ASN C 134 . ? 1_555 ? 59 AC5 22 LYS B 119 ? LYS C 135 . ? 1_555 ? 60 AC5 22 ASP B 121 ? ASP C 137 . ? 1_555 ? 61 AC5 22 LEU B 122 ? LEU C 138 . ? 1_555 ? 62 AC5 22 SER B 148 ? SER C 164 . ? 1_555 ? 63 AC5 22 ALA B 149 ? ALA C 165 . ? 1_555 ? 64 AC5 22 LYS B 150 ? LYS C 166 . ? 1_555 ? 65 AC5 22 MG F . ? MG C 800 . ? 1_555 ? 66 AC5 22 HOH I . ? HOH C 907 . ? 1_555 ? 67 AC5 22 HOH I . ? HOH C 916 . ? 1_555 ? 68 AC5 22 HOH I . ? HOH C 923 . ? 1_555 ? 69 AC5 22 HOH I . ? HOH C 933 . ? 1_555 ? 70 AC5 22 HOH I . ? HOH C 945 . ? 1_555 ? 71 AC5 22 HOH I . ? HOH C 984 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 753 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 757 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 66 ? ? 51.85 -122.83 2 1 ASP C 66 ? ? 32.35 75.62 3 1 ASP C 67 ? ? 80.61 -19.44 4 1 ALA C 168 ? ? 76.35 -0.06 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 17 ? A GLY 1 2 1 Y 1 A SER 18 ? A SER 2 3 1 Y 1 C GLY 17 ? B GLY 1 4 1 Y 1 C SER 18 ? B SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PO4 P P N N 317 PO4 O1 O N N 318 PO4 O2 O N N 319 PO4 O3 O N N 320 PO4 O4 O N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PO4 P O1 doub N N 305 PO4 P O2 sing N N 306 PO4 P O3 sing N N 307 PO4 P O4 sing N N 308 PRO N CA sing N N 309 PRO N CD sing N N 310 PRO N H sing N N 311 PRO CA C sing N N 312 PRO CA CB sing N N 313 PRO CA HA sing N N 314 PRO C O doub N N 315 PRO C OXT sing N N 316 PRO CB CG sing N N 317 PRO CB HB2 sing N N 318 PRO CB HB3 sing N N 319 PRO CG CD sing N N 320 PRO CG HG2 sing N N 321 PRO CG HG3 sing N N 322 PRO CD HD2 sing N N 323 PRO CD HD3 sing N N 324 PRO OXT HXT sing N N 325 SER N CA sing N N 326 SER N H sing N N 327 SER N H2 sing N N 328 SER CA C sing N N 329 SER CA CB sing N N 330 SER CA HA sing N N 331 SER C O doub N N 332 SER C OXT sing N N 333 SER CB OG sing N N 334 SER CB HB2 sing N N 335 SER CB HB3 sing N N 336 SER OG HG sing N N 337 SER OXT HXT sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TRP N CA sing N N 355 TRP N H sing N N 356 TRP N H2 sing N N 357 TRP CA C sing N N 358 TRP CA CB sing N N 359 TRP CA HA sing N N 360 TRP C O doub N N 361 TRP C OXT sing N N 362 TRP CB CG sing N N 363 TRP CB HB2 sing N N 364 TRP CB HB3 sing N N 365 TRP CG CD1 doub Y N 366 TRP CG CD2 sing Y N 367 TRP CD1 NE1 sing Y N 368 TRP CD1 HD1 sing N N 369 TRP CD2 CE2 doub Y N 370 TRP CD2 CE3 sing Y N 371 TRP NE1 CE2 sing Y N 372 TRP NE1 HE1 sing N N 373 TRP CE2 CZ2 sing Y N 374 TRP CE3 CZ3 doub Y N 375 TRP CE3 HE3 sing N N 376 TRP CZ2 CH2 doub Y N 377 TRP CZ2 HZ2 sing N N 378 TRP CZ3 CH2 sing Y N 379 TRP CZ3 HZ3 sing N N 380 TRP CH2 HH2 sing N N 381 TRP OXT HXT sing N N 382 TYR N CA sing N N 383 TYR N H sing N N 384 TYR N H2 sing N N 385 TYR CA C sing N N 386 TYR CA CB sing N N 387 TYR CA HA sing N N 388 TYR C O doub N N 389 TYR C OXT sing N N 390 TYR CB CG sing N N 391 TYR CB HB2 sing N N 392 TYR CB HB3 sing N N 393 TYR CG CD1 doub Y N 394 TYR CG CD2 sing Y N 395 TYR CD1 CE1 sing Y N 396 TYR CD1 HD1 sing N N 397 TYR CD2 CE2 doub Y N 398 TYR CD2 HD2 sing N N 399 TYR CE1 CZ doub Y N 400 TYR CE1 HE1 sing N N 401 TYR CE2 CZ sing Y N 402 TYR CE2 HE2 sing N N 403 TYR CZ OH sing N N 404 TYR OH HH sing N N 405 TYR OXT HXT sing N N 406 VAL N CA sing N N 407 VAL N H sing N N 408 VAL N H2 sing N N 409 VAL CA C sing N N 410 VAL CA CB sing N N 411 VAL CA HA sing N N 412 VAL C O doub N N 413 VAL C OXT sing N N 414 VAL CB CG1 sing N N 415 VAL CB CG2 sing N N 416 VAL CB HB sing N N 417 VAL CG1 HG11 sing N N 418 VAL CG1 HG12 sing N N 419 VAL CG1 HG13 sing N N 420 VAL CG2 HG21 sing N N 421 VAL CG2 HG22 sing N N 422 VAL CG2 HG23 sing N N 423 VAL OXT HXT sing N N 424 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Polyalanine Rab3A GTPase' # _atom_sites.entry_id 1Z0D _atom_sites.fract_transf_matrix[1][1] 0.026041 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014098 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007267 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_