HEADER TRANSCRIPTION 03-MAR-05 1Z1A TITLE S. CEREVISIAE SIR1 ORC-INTERACTION DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATORY PROTEIN SIR1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ORC-1 INTERACTING DOMAIN OF SIR1P; COMPND 5 SYNONYM: SILENT INFORMATION REGULATOR 1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: SIR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS NOVEL FOLD, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Z.HOU,D.A.BERNSTEIN,C.A.FOX,J.L.KECK REVDAT 4 20-OCT-21 1Z1A 1 SEQADV LINK REVDAT 3 13-JUL-11 1Z1A 1 VERSN REVDAT 2 24-FEB-09 1Z1A 1 VERSN REVDAT 1 07-JUN-05 1Z1A 0 JRNL AUTH Z.HOU,D.A.BERNSTEIN,C.A.FOX,J.L.KECK JRNL TITL STRUCTURAL BASIS OF THE SIR1-ORIGIN RECOGNITION COMPLEX JRNL TITL 2 INTERACTION IN TRANSCRIPTIONAL SILENCING. JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 8489 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 15932939 JRNL DOI 10.1073/PNAS.0503525102 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 11078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1206 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 742 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1944 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 43 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.39000 REMARK 3 B22 (A**2) : -1.39000 REMARK 3 B33 (A**2) : 2.09000 REMARK 3 B12 (A**2) : -0.70000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.494 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.234 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.665 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1990 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2685 ; 1.012 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 232 ; 6.382 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 303 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1454 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 757 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 62 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 57 ; 0.206 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.118 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1189 ; 1.437 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1938 ; 2.703 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 801 ; 2.569 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 747 ; 4.347 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 484 A 611 REMARK 3 ORIGIN FOR THE GROUP (A): 20.2308 -1.5446 79.8657 REMARK 3 T TENSOR REMARK 3 T11: 0.1654 T22: 0.0862 REMARK 3 T33: 0.1207 T12: -0.0927 REMARK 3 T13: 0.0104 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.8952 L22: 3.5566 REMARK 3 L33: -0.0687 L12: 2.4155 REMARK 3 L13: -0.0711 L23: -0.4055 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.0025 S13: 0.1373 REMARK 3 S21: -0.1474 S22: 0.1358 S23: 0.2482 REMARK 3 S31: 0.0321 S32: 0.0978 S33: -0.1612 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 486 B 611 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7116 17.1552 47.7019 REMARK 3 T TENSOR REMARK 3 T11: 0.2044 T22: 0.0865 REMARK 3 T33: 0.0839 T12: 0.1047 REMARK 3 T13: -0.1051 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.0703 L22: 2.5970 REMARK 3 L33: 0.7754 L12: -2.4115 REMARK 3 L13: 1.3148 L23: 0.1198 REMARK 3 S TENSOR REMARK 3 S11: -0.0517 S12: -0.1570 S13: -0.0237 REMARK 3 S21: -0.0403 S22: 0.1393 S23: 0.0809 REMARK 3 S31: 0.0688 S32: -0.0392 S33: -0.0877 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 43 REMARK 3 ORIGIN FOR THE GROUP (A): 20.3474 8.3483 66.8955 REMARK 3 T TENSOR REMARK 3 T11: 0.1562 T22: 0.1326 REMARK 3 T33: 0.1527 T12: -0.0259 REMARK 3 T13: -0.0086 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: -0.3441 L22: 0.6796 REMARK 3 L33: 1.2467 L12: -0.3438 REMARK 3 L13: 0.1361 L23: -0.6464 REMARK 3 S TENSOR REMARK 3 S11: 0.2814 S12: -0.0324 S13: -0.0286 REMARK 3 S21: -0.0039 S22: -0.2001 S23: 0.1547 REMARK 3 S31: 0.0268 S32: -0.1441 S33: -0.0813 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Z1A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032171. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793, 0.9795, 0.9688 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11994 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, PEG 400, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.17133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.08567 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.08567 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 106.17133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 470 REMARK 465 SER A 471 REMARK 465 HIS A 472 REMARK 465 MET A 473 REMARK 465 GLU A 474 REMARK 465 ASN A 475 REMARK 465 MET A 476 REMARK 465 TRP A 477 REMARK 465 ALA A 478 REMARK 465 ALA A 479 REMARK 465 GLU A 480 REMARK 465 LYS A 481 REMARK 465 LYS A 482 REMARK 465 PHE A 483 REMARK 465 THR A 578 REMARK 465 GLU A 579 REMARK 465 ALA A 580 REMARK 465 ASN A 581 REMARK 465 LEU A 582 REMARK 465 LYS A 583 REMARK 465 TYR A 584 REMARK 465 GLU A 585 REMARK 465 PRO A 586 REMARK 465 GLU A 587 REMARK 465 ARG A 588 REMARK 465 GLY B 470 REMARK 465 SER B 471 REMARK 465 HIS B 472 REMARK 465 MET B 473 REMARK 465 GLU B 474 REMARK 465 ASN B 475 REMARK 465 MET B 476 REMARK 465 TRP B 477 REMARK 465 ALA B 478 REMARK 465 ALA B 479 REMARK 465 GLU B 480 REMARK 465 LYS B 481 REMARK 465 LYS B 482 REMARK 465 PHE B 483 REMARK 465 SER B 484 REMARK 465 THR B 485 REMARK 465 LEU B 582 REMARK 465 LYS B 583 REMARK 465 TYR B 584 REMARK 465 GLU B 585 REMARK 465 PRO B 586 REMARK 465 GLU B 587 REMARK 465 ARG B 588 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 498 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 553 -23.15 -148.98 REMARK 500 GLU B 507 52.15 74.38 REMARK 500 ASN B 533 80.10 49.09 REMARK 500 LYS B 550 43.61 -76.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZHI RELATED DB: PDB REMARK 900 COMPLEX OF THE S. CEREVISIAE ORC1 AND SIR1 INTERACTING DOMAINS DBREF 1Z1A A 473 611 UNP P21691 SIR1_YEAST 473 611 DBREF 1Z1A B 473 611 UNP P21691 SIR1_YEAST 473 611 SEQADV 1Z1A GLY A 470 UNP P21691 CLONING ARTIFACT SEQADV 1Z1A SER A 471 UNP P21691 CLONING ARTIFACT SEQADV 1Z1A HIS A 472 UNP P21691 CLONING ARTIFACT SEQADV 1Z1A MSE A 528 UNP P21691 MET 528 MODIFIED RESIDUE SEQADV 1Z1A MSE A 532 UNP P21691 MET 532 MODIFIED RESIDUE SEQADV 1Z1A MSE A 589 UNP P21691 MET 589 MODIFIED RESIDUE SEQADV 1Z1A GLY B 470 UNP P21691 CLONING ARTIFACT SEQADV 1Z1A SER B 471 UNP P21691 CLONING ARTIFACT SEQADV 1Z1A HIS B 472 UNP P21691 CLONING ARTIFACT SEQADV 1Z1A MSE B 528 UNP P21691 MET 528 MODIFIED RESIDUE SEQADV 1Z1A MSE B 532 UNP P21691 MET 532 MODIFIED RESIDUE SEQADV 1Z1A MSE B 589 UNP P21691 MET 589 MODIFIED RESIDUE SEQADV 1Z1A CYS A 558 UNP P21691 ALA 593 ENGINEERED MUTATION SEQADV 1Z1A CYS B 558 UNP P21691 ALA 593 ENGINEERED MUTATION SEQRES 1 A 142 GLY SER HIS MET GLU ASN MET TRP ALA ALA GLU LYS LYS SEQRES 2 A 142 PHE SER THR GLU GLU GLU TYR VAL SER PRO ARG PHE LEU SEQRES 3 A 142 VAL ALA ASP GLY PHE LEU ILE ASP LEU ALA GLU GLU LYS SEQRES 4 A 142 PRO ILE ASN PRO LYS ASP PRO ARG LEU LEU THR LEU LEU SEQRES 5 A 142 LYS ASP HIS GLN ARG ALA MSE ILE ASP GLN MSE ASN LEU SEQRES 6 A 142 VAL LYS TRP ASN ASP PHE LYS LYS TYR GLN ASP PRO ILE SEQRES 7 A 142 PRO LEU LYS ALA LYS THR LEU PHE LYS PHE CYS LYS GLN SEQRES 8 A 142 ILE LYS LYS LYS PHE LEU ARG GLY ALA ASP PHE LYS LEU SEQRES 9 A 142 HIS THR LEU PRO THR GLU ALA ASN LEU LYS TYR GLU PRO SEQRES 10 A 142 GLU ARG MSE THR VAL LEU ALA SER CYS VAL PRO ILE LEU SEQRES 11 A 142 LEU ASP ASP GLN THR VAL GLN TYR LEU TYR ASP ASP SEQRES 1 B 142 GLY SER HIS MET GLU ASN MET TRP ALA ALA GLU LYS LYS SEQRES 2 B 142 PHE SER THR GLU GLU GLU TYR VAL SER PRO ARG PHE LEU SEQRES 3 B 142 VAL ALA ASP GLY PHE LEU ILE ASP LEU ALA GLU GLU LYS SEQRES 4 B 142 PRO ILE ASN PRO LYS ASP PRO ARG LEU LEU THR LEU LEU SEQRES 5 B 142 LYS ASP HIS GLN ARG ALA MSE ILE ASP GLN MSE ASN LEU SEQRES 6 B 142 VAL LYS TRP ASN ASP PHE LYS LYS TYR GLN ASP PRO ILE SEQRES 7 B 142 PRO LEU LYS ALA LYS THR LEU PHE LYS PHE CYS LYS GLN SEQRES 8 B 142 ILE LYS LYS LYS PHE LEU ARG GLY ALA ASP PHE LYS LEU SEQRES 9 B 142 HIS THR LEU PRO THR GLU ALA ASN LEU LYS TYR GLU PRO SEQRES 10 B 142 GLU ARG MSE THR VAL LEU ALA SER CYS VAL PRO ILE LEU SEQRES 11 B 142 LEU ASP ASP GLN THR VAL GLN TYR LEU TYR ASP ASP MODRES 1Z1A MSE A 528 MET SELENOMETHIONINE MODRES 1Z1A MSE A 532 MET SELENOMETHIONINE MODRES 1Z1A MSE A 589 MET SELENOMETHIONINE MODRES 1Z1A MSE B 528 MET SELENOMETHIONINE MODRES 1Z1A MSE B 532 MET SELENOMETHIONINE MODRES 1Z1A MSE B 589 MET SELENOMETHIONINE HET MSE A 528 12 HET MSE A 532 8 HET MSE A 589 8 HET MSE B 528 8 HET MSE B 532 8 HET MSE B 589 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HOH *43(H2 O) HELIX 1 1 ARG A 516 LEU A 521 1 6 HELIX 2 2 LYS A 522 GLN A 531 1 10 HELIX 3 3 LYS A 536 LYS A 541 5 6 HELIX 4 4 THR A 553 CYS A 558 1 6 HELIX 5 5 ARG B 516 LEU B 521 1 6 HELIX 6 6 LYS B 522 GLN B 531 1 10 HELIX 7 7 LYS B 536 LYS B 542 5 7 HELIX 8 8 THR B 553 CYS B 558 1 6 SHEET 1 A 4 GLU A 488 TYR A 489 0 SHEET 2 A 4 PHE A 494 ALA A 497 -1 O VAL A 496 N GLU A 488 SHEET 3 A 4 PHE A 500 ASP A 503 -1 O ILE A 502 N LEU A 495 SHEET 4 A 4 LYS A 508 ILE A 510 -1 O LYS A 508 N ASP A 503 SHEET 1 B 5 ILE A 547 LEU A 549 0 SHEET 2 B 5 VAL A 605 ASP A 610 1 O TYR A 607 N ILE A 547 SHEET 3 B 5 THR A 590 LEU A 599 -1 N ILE A 598 O GLN A 606 SHEET 4 B 5 ILE A 561 ARG A 567 -1 N PHE A 565 O VAL A 591 SHEET 5 B 5 LEU A 573 HIS A 574 -1 O HIS A 574 N LEU A 566 SHEET 1 C 4 GLU B 488 TYR B 489 0 SHEET 2 C 4 PHE B 494 ALA B 497 -1 O VAL B 496 N GLU B 488 SHEET 3 C 4 PHE B 500 ASP B 503 -1 O ILE B 502 N LEU B 495 SHEET 4 C 4 LYS B 508 ILE B 510 -1 O LYS B 508 N ASP B 503 SHEET 1 D 5 ILE B 547 LEU B 549 0 SHEET 2 D 5 VAL B 605 ASP B 610 1 O TYR B 607 N ILE B 547 SHEET 3 D 5 THR B 590 LEU B 599 -1 N VAL B 596 O LEU B 608 SHEET 4 D 5 ILE B 561 ARG B 567 -1 N LYS B 563 O ALA B 593 SHEET 5 D 5 LEU B 573 HIS B 574 -1 O HIS B 574 N LEU B 566 LINK C ALA A 527 N MSE A 528 1555 1555 1.34 LINK C MSE A 528 N ILE A 529 1555 1555 1.33 LINK C GLN A 531 N MSE A 532 1555 1555 1.32 LINK C MSE A 532 N ASN A 533 1555 1555 1.33 LINK C MSE A 589 N THR A 590 1555 1555 1.33 LINK C ALA B 527 N MSE B 528 1555 1555 1.34 LINK C MSE B 528 N ILE B 529 1555 1555 1.33 LINK C GLN B 531 N MSE B 532 1555 1555 1.33 LINK C MSE B 532 N ASN B 533 1555 1555 1.33 LINK C MSE B 589 N THR B 590 1555 1555 1.33 CRYST1 60.928 60.928 159.257 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016413 0.009476 0.000000 0.00000 SCALE2 0.000000 0.018952 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006279 0.00000