HEADER RECOMBINATION/DNA BINDING 12-MAR-05 1Z3I TITLE STRUCTURE OF THE SWI2/SNF2 CHROMATIN REMODELING DOMAIN OF EUKARYOTIC TITLE 2 RAD54 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIMILAR TO RAD54-LIKE; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: PROTEOLYTIC FRAGMENT; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS RECOMBINATION ATPASE HELICASE, RECOMBINATION-DNA BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.H.THOMA,B.K.CZYZEWSKI,A.A.ALEXEEV,A.V.MAZIN,S.C.KOWALCZYKOWSKI, AUTHOR 2 N.P.PAVLETICH REVDAT 5 14-FEB-24 1Z3I 1 REMARK LINK REVDAT 4 13-JUL-11 1Z3I 1 VERSN REVDAT 3 24-FEB-09 1Z3I 1 VERSN REVDAT 2 12-APR-05 1Z3I 1 JRNL REVDAT 1 05-APR-05 1Z3I 0 JRNL AUTH N.H.THOMA,B.K.CZYZEWSKI,A.A.ALEXEEV,A.V.MAZIN, JRNL AUTH 2 S.C.KOWALCZYKOWSKI,N.P.PAVLETICH JRNL TITL STRUCTURE OF THE SWI2/SNF2 CHROMATIN-REMODELING DOMAIN OF JRNL TITL 2 EUKARYOTIC RAD54. JRNL REF NAT.STRUCT.MOL.BIOL. V. 12 350 2005 JRNL REFN ISSN 1545-9993 JRNL PMID 15806108 JRNL DOI 10.1038/NSMB919 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 29139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1545 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2105 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3270 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5052 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.54000 REMARK 3 B22 (A**2) : 1.54000 REMARK 3 B33 (A**2) : -2.31000 REMARK 3 B12 (A**2) : 0.77000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.461 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.299 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.221 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.423 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5184 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7013 ; 1.236 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 643 ; 5.869 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 227 ;35.469 ;23.612 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 932 ;20.500 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;19.012 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 785 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3841 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2458 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3480 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 141 ; 0.167 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.094 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 52 ; 0.184 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.260 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3267 ; 0.938 ; 1.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5169 ; 1.650 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2107 ; 2.169 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1844 ; 3.601 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Z3I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032251. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-04; NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0; NULL REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 17-ID; 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.041; 1.03909, 1.04013, 1.02635 REMARK 200 MONOCHROMATOR : INSERTION DEVICE; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31235 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, MALONATE, PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K, PH 6.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 102.52300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.19168 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 63.31933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 102.52300 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 59.19168 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 63.31933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 102.52300 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 59.19168 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 63.31933 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 102.52300 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 59.19168 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 63.31933 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 102.52300 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 59.19168 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 63.31933 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 102.52300 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 59.19168 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 63.31933 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 118.38336 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 126.63867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 118.38336 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 126.63867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 118.38336 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 126.63867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 118.38336 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 126.63867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 118.38336 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 126.63867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 118.38336 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 126.63867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 27840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 158290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -771.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU X 92 CG CD1 CD2 REMARK 470 MET X 258 CG SD CE REMARK 470 THR X 433 OG1 CG2 REMARK 470 LYS X 435 CB CG CD CE NZ REMARK 470 ILE X 436 CB CG1 CG2 CD1 REMARK 470 SER X 437 CB OG REMARK 470 SER X 636 OG REMARK 470 SER X 637 OG REMARK 470 VAL X 639 CG1 CG2 REMARK 470 VAL X 640 CG1 CG2 REMARK 470 ASP X 641 CG OD1 OD2 REMARK 470 GLU X 642 CG CD OE1 OE2 REMARK 470 GLU X 643 CG CD OE1 OE2 REMARK 470 GLN X 644 CG CD OE1 NE2 REMARK 470 ASP X 645 CG OD1 OD2 REMARK 470 VAL X 646 CG1 CG2 REMARK 470 GLU X 647 CG CD OE1 OE2 REMARK 470 ARG X 648 CG CD NE CZ NH1 NH2 REMARK 470 ASP X 733 CG OD1 OD2 REMARK 470 GLN X 734 CG CD OE1 NE2 REMARK 470 ARG X 735 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU X 228 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG X 95 -73.78 -133.69 REMARK 500 ARG X 96 159.71 69.98 REMARK 500 ASN X 169 5.97 82.60 REMARK 500 CYS X 201 44.45 71.20 REMARK 500 ASP X 238 101.50 -165.36 REMARK 500 GLN X 256 -133.07 -73.10 REMARK 500 MET X 258 -87.35 74.47 REMARK 500 LYS X 283 73.00 44.47 REMARK 500 PHE X 351 -64.98 -109.03 REMARK 500 ASP X 362 18.12 165.16 REMARK 500 ASP X 365 -47.83 80.13 REMARK 500 TYR X 397 0.68 -158.59 REMARK 500 GLU X 429 51.39 -111.13 REMARK 500 GLN X 432 -109.02 -135.48 REMARK 500 LYS X 435 -106.24 149.37 REMARK 500 ILE X 436 144.93 80.05 REMARK 500 SER X 437 8.55 176.08 REMARK 500 HIS X 453 128.41 179.83 REMARK 500 GLU X 466 105.88 -42.96 REMARK 500 GLN X 477 -38.61 -39.03 REMARK 500 ASP X 538 -83.39 -69.27 REMARK 500 LEU X 576 55.30 -114.12 REMARK 500 ALA X 599 35.63 -92.00 REMARK 500 LEU X 635 44.60 -77.05 REMARK 500 SER X 636 -74.98 43.19 REMARK 500 SER X 637 -108.66 -74.75 REMARK 500 CYS X 638 72.41 57.41 REMARK 500 GLU X 643 -61.19 -171.90 REMARK 500 ASP X 645 -105.89 -76.41 REMARK 500 GLU X 647 39.95 -96.29 REMARK 500 HIS X 649 40.26 -107.84 REMARK 500 PHE X 650 -67.44 -126.59 REMARK 500 SER X 651 166.56 96.83 REMARK 500 PHE X 659 44.43 -104.75 REMARK 500 SER X 667 116.66 -165.74 REMARK 500 LYS X 706 14.72 -61.29 REMARK 500 ASP X 719 -141.51 -128.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN X 900 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS X 670 NE2 REMARK 620 2 CYS X 675 SG 119.3 REMARK 620 3 CYS X 678 SG 106.9 102.9 REMARK 620 4 HIS X 702 ND1 109.1 105.1 113.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN X 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 736 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 737 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 738 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 739 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 740 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 742 DBREF 1Z3I X 92 735 UNP Q7ZV09 Q7ZV09_BRARE 92 735 SEQRES 1 X 644 LEU GLY LEU ARG ARG ALA GLY VAL ARG LYS ALA LEU HIS SEQRES 2 X 644 ASP PRO PHE GLU ASP GLY ALA LEU VAL LEU TYR GLU PRO SEQRES 3 X 644 PRO ALA ILE SER ALA HIS ASP LEU ILE LYS ALA ASP LYS SEQRES 4 X 644 GLU LYS LEU PRO VAL HIS VAL VAL VAL ASP PRO VAL LEU SEQRES 5 X 644 SER LYS VAL LEU ARG PRO HIS GLN ARG GLU GLY VAL LYS SEQRES 6 X 644 PHE LEU TRP ASP CYS VAL THR GLY ARG ARG ILE GLU ASN SEQRES 7 X 644 SER TYR GLY CYS ILE MET ALA ASP GLU MET GLY LEU GLY SEQRES 8 X 644 LYS THR LEU GLN CYS ILE THR LEU ILE TRP THR LEU LEU SEQRES 9 X 644 LYS GLN SER PRO ASP CYS LYS PRO GLU ILE ASP LYS VAL SEQRES 10 X 644 ILE VAL VAL SER PRO SER SER LEU VAL ARG ASN TRP TYR SEQRES 11 X 644 ASN GLU VAL GLY LYS TRP LEU GLY GLY ARG VAL GLN PRO SEQRES 12 X 644 VAL ALA ILE ASP GLY GLY SER LYS ASP GLU ILE ASP SER SEQRES 13 X 644 LYS LEU VAL ASN PHE ILE SER GLN GLN GLY MET ARG ILE SEQRES 14 X 644 PRO THR PRO ILE LEU ILE ILE SER TYR GLU THR PHE ARG SEQRES 15 X 644 LEU HIS ALA GLU VAL LEU HIS LYS GLY LYS VAL GLY LEU SEQRES 16 X 644 VAL ILE CYS ASP GLU GLY HIS ARG LEU LYS ASN SER ASP SEQRES 17 X 644 ASN GLN THR TYR LEU ALA LEU ASN SER MET ASN ALA GLN SEQRES 18 X 644 ARG ARG VAL LEU ILE SER GLY THR PRO ILE GLN ASN ASP SEQRES 19 X 644 LEU LEU GLU TYR PHE SER LEU VAL HIS PHE VAL ASN SER SEQRES 20 X 644 GLY ILE LEU GLY THR ALA GLN GLU PHE LYS LYS ARG PHE SEQRES 21 X 644 GLU ILE PRO ILE LEU LYS GLY ARG ASP ALA ASP ALA SER SEQRES 22 X 644 ASP LYS ASP ARG ALA ALA GLY GLU GLN LYS LEU GLN GLU SEQRES 23 X 644 LEU ILE SER ILE VAL ASN ARG CYS LEU ILE ARG ARG THR SEQRES 24 X 644 SER ASP ILE LEU SER LYS TYR LEU PRO VAL LYS ILE GLU SEQRES 25 X 644 GLN VAL VAL CYS CYS ASN LEU THR PRO LEU GLN LYS GLU SEQRES 26 X 644 LEU TYR LYS LEU PHE LEU LYS GLN ALA LYS PRO VAL GLU SEQRES 27 X 644 SER LEU GLN THR GLY LYS ILE SER VAL SER SER LEU SER SEQRES 28 X 644 SER ILE THR SER LEU LYS LYS LEU CYS ASN HIS PRO ALA SEQRES 29 X 644 LEU ILE TYR GLU LYS CYS LEU THR GLY GLU GLU GLY PHE SEQRES 30 X 644 ASP GLY ALA LEU ASP LEU PHE PRO GLN ASN TYR SER THR SEQRES 31 X 644 LYS ALA VAL GLU PRO GLN LEU SER GLY LYS MET LEU VAL SEQRES 32 X 644 LEU ASP TYR ILE LEU ALA MET THR ARG THR THR THR SER SEQRES 33 X 644 ASP LYS VAL VAL LEU VAL SER ASN TYR THR GLN THR LEU SEQRES 34 X 644 ASP LEU PHE GLU LYS LEU CYS ARG ASN ARG ARG TYR LEU SEQRES 35 X 644 TYR VAL ARG LEU ASP GLY THR MET SER ILE LYS LYS ARG SEQRES 36 X 644 ALA LYS ILE VAL GLU ARG PHE ASN ASN PRO SER SER PRO SEQRES 37 X 644 GLU PHE ILE PHE MET LEU SER SER LYS ALA GLY GLY CYS SEQRES 38 X 644 GLY LEU ASN LEU ILE GLY ALA ASN ARG LEU VAL MET PHE SEQRES 39 X 644 ASP PRO ASP TRP ASN PRO ALA ASN ASP GLU GLN ALA MET SEQRES 40 X 644 ALA ARG VAL TRP ARG ASP GLY GLN LYS LYS THR CYS TYR SEQRES 41 X 644 ILE TYR ARG LEU LEU SER THR GLY THR ILE GLU GLU LYS SEQRES 42 X 644 ILE LEU GLN ARG GLN ALA HIS LYS LYS ALA LEU SER SER SEQRES 43 X 644 CYS VAL VAL ASP GLU GLU GLN ASP VAL GLU ARG HIS PHE SEQRES 44 X 644 SER LEU GLY GLU LEU ARG GLU LEU PHE SER LEU ASN GLU SEQRES 45 X 644 LYS THR LEU SER ASP THR HIS ASP ARG PHE ARG CYS ARG SEQRES 46 X 644 ARG CYS VAL ASN GLY ARG GLN VAL ARG PRO PRO PRO ASP SEQRES 47 X 644 ASP SER ASP CYS THR CYS ASP LEU SER ASN TRP HIS HIS SEQRES 48 X 644 CYS ALA ASP LYS ARG GLY LEU ARG ASP PRO VAL LEU GLN SEQRES 49 X 644 ALA SER TRP ASP ALA ALA VAL SER PHE VAL PHE HIS GLN SEQRES 50 X 644 ARG SER HIS GLU ASP GLN ARG HET ZN X 900 1 HET SO4 X 901 5 HET SO4 X 902 5 HET SO4 X 903 5 HET SO4 X 736 5 HET SO4 X 737 5 HET SO4 X 738 5 HET SO4 X 739 5 HET SO4 X 740 5 HET SO4 X 742 5 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 2 ZN ZN 2+ FORMUL 3 SO4 9(O4 S 2-) HELIX 1 1 SER X 121 ALA X 128 1 8 HELIX 2 2 ASP X 129 LEU X 133 5 5 HELIX 3 3 ASP X 140 LYS X 145 1 6 HELIX 4 4 ARG X 148 THR X 163 1 16 HELIX 5 5 GLY X 182 GLN X 197 1 16 HELIX 6 6 PRO X 213 SER X 215 5 3 HELIX 7 7 LEU X 216 GLY X 229 1 14 HELIX 8 8 GLY X 230 VAL X 232 5 3 HELIX 9 9 SER X 241 SER X 254 1 14 HELIX 10 10 TYR X 269 ALA X 276 1 8 HELIX 11 11 GLU X 291 LEU X 295 5 5 HELIX 12 12 ASP X 299 ASN X 310 1 12 HELIX 13 13 ILE X 322 GLU X 328 5 7 HELIX 14 14 TYR X 329 GLY X 342 1 14 HELIX 15 15 THR X 343 PHE X 351 1 9 HELIX 16 16 PHE X 351 ASP X 360 1 10 HELIX 17 17 ASP X 365 CYS X 385 1 21 HELIX 18 18 THR X 390 TYR X 397 5 8 HELIX 19 19 THR X 411 LYS X 426 1 16 HELIX 20 20 PRO X 427 SER X 430 5 4 HELIX 21 21 VAL X 438 HIS X 453 1 16 HELIX 22 22 PRO X 454 GLY X 464 1 11 HELIX 23 23 GLY X 470 LEU X 474 5 5 HELIX 24 24 GLU X 485 LEU X 488 5 4 HELIX 25 25 SER X 489 THR X 506 1 18 HELIX 26 26 TYR X 516 ARG X 531 1 16 HELIX 27 27 SER X 542 ASN X 555 1 14 HELIX 28 28 LYS X 568 GLY X 570 5 3 HELIX 29 29 ASN X 590 ALA X 599 1 10 HELIX 30 30 THR X 620 LEU X 635 1 16 HELIX 31 31 SER X 651 PHE X 659 1 9 HELIX 32 32 SER X 667 ARG X 674 1 8 HELIX 33 33 ASP X 696 TRP X 700 5 5 HELIX 34 34 ASP X 711 TRP X 718 1 8 SHEET 1 A 2 VAL X 113 TYR X 115 0 SHEET 2 A 2 VAL X 137 VAL X 138 -1 O VAL X 137 N TYR X 115 SHEET 1 B 7 PRO X 234 ILE X 237 0 SHEET 2 B 7 ILE X 264 SER X 268 1 O ILE X 266 N ILE X 237 SHEET 3 B 7 VAL X 208 SER X 212 1 N VAL X 210 O LEU X 265 SHEET 4 B 7 LEU X 286 CYS X 289 1 O LEU X 286 N ILE X 209 SHEET 5 B 7 ARG X 313 ILE X 317 1 O VAL X 315 N VAL X 287 SHEET 6 B 7 GLY X 172 MET X 175 1 N CYS X 173 O LEU X 316 SHEET 7 B 7 LEU X 386 ILE X 387 1 O ILE X 387 N ILE X 174 SHEET 1 C 8 TYR X 534 LEU X 537 0 SHEET 2 C 8 ILE X 562 SER X 566 1 O MET X 564 N LEU X 537 SHEET 3 C 8 LYS X 509 SER X 514 1 N VAL X 510 O PHE X 563 SHEET 4 C 8 ALA X 579 MET X 584 1 O VAL X 583 N VAL X 511 SHEET 5 C 8 CYS X 610 SER X 617 1 O TYR X 613 N MET X 584 SHEET 6 C 8 LYS X 401 CYS X 408 1 N CYS X 408 O LEU X 616 SHEET 7 C 8 VAL X 722 ARG X 729 -1 O PHE X 724 N CYS X 407 SHEET 8 C 8 HIS X 701 CYS X 703 -1 N HIS X 701 O HIS X 727 SHEET 1 D 2 CYS X 678 VAL X 679 0 SHEET 2 D 2 ARG X 682 GLN X 683 -1 O ARG X 682 N VAL X 679 LINK NE2 HIS X 670 ZN ZN X 900 1555 1555 2.05 LINK SG CYS X 675 ZN ZN X 900 1555 1555 2.25 LINK SG CYS X 678 ZN ZN X 900 1555 1555 2.28 LINK ND1 HIS X 702 ZN ZN X 900 1555 1555 1.93 SITE 1 AC1 4 HIS X 670 CYS X 675 CYS X 678 HIS X 702 SITE 1 AC2 4 GLN X 151 GLY X 182 ARG X 603 ASP X 604 SITE 1 AC3 9 GLY X 180 LEU X 181 GLY X 182 LYS X 183 SITE 2 AC3 9 THR X 184 CYS X 572 GLY X 573 ARG X 600 SITE 3 AC3 9 ARG X 603 SITE 1 AC4 4 ALA X 111 LEU X 112 ARG X 152 LYS X 156 SITE 1 AC5 3 ARG X 388 THR X 390 ARG X 676 SITE 1 AC6 6 PRO X 213 SER X 214 SER X 268 TYR X 269 SITE 2 AC6 6 GLU X 270 ARG X 294 SITE 1 AC7 1 ARG X 148 SITE 1 AC8 3 CYS X 695 ASP X 696 ASN X 699 SITE 1 AC9 2 TYR X 115 ARG X 165 SITE 1 BC1 2 GLN X 312 ARG X 313 CRYST1 205.046 205.046 189.958 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004877 0.002816 0.000000 0.00000 SCALE2 0.000000 0.005631 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005264 0.00000