data_1Z4D # _entry.id 1Z4D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1Z4D RCSB RCSB032282 WWPDB D_1000032282 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2006-01-31 _pdbx_database_PDB_obs_spr.pdb_id 2FPM _pdbx_database_PDB_obs_spr.replace_pdb_id 1Z4D _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1T4G 'The same protein.' unspecified PDB 1XU4 'The same protein.' unspecified PDB 1Z4B . unspecified PDB 1Z4C . unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1Z4D _pdbx_database_status.recvd_initial_deposition_date 2005-03-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, Y.' 1 'Qian, X.' 2 'He, Y.' 3 'Luo, Y.' 4 # _citation.id primary _citation.title 'Crystal Structure of Methanococcus voltae RadA in Complex with ADP: Hydrolysis-Induced Conformational Change.' _citation.journal_abbrev Biochemistry _citation.journal_volume 44 _citation.page_first 13753 _citation.page_last 13761 _citation.year 2005 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16229465 _citation.pdbx_database_id_DOI 10.1021/bi051222i # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Qian, X.' 1 primary 'Wu, Y.' 2 primary 'He, Y.' 3 primary 'Luo, Y.' 4 # _cell.entry_id 1Z4D _cell.length_a 83.699 _cell.length_b 83.699 _cell.length_c 105.440 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1Z4D _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA repair and recombination protein radA' 35198.930 1 ? S2G ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 4 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 506.196 1 ? ? ? ? 5 water nat water 18.015 100 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGDNLTDLPGVGPSTAEKLVEAGYIDFMKIATATVGELTDIEGISEKAAAKMIMGARDLCDLGFKSGIDLLKQRSTVWKL STSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIM QMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMAT LNKLADLFNCVVLVTNQVSAKPDAFFGMAEQAIGGHIVGHAATFRFFVRKGKGDKRVAKLYDSPHLPDAEAIFRITEKGI QD ; _entity_poly.pdbx_seq_one_letter_code_can ;MGDNLTDLPGVGPSTAEKLVEAGYIDFMKIATATVGELTDIEGISEKAAAKMIMGARDLCDLGFKSGIDLLKQRSTVWKL STSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIM QMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMAT LNKLADLFNCVVLVTNQVSAKPDAFFGMAEQAIGGHIVGHAATFRFFVRKGKGDKRVAKLYDSPHLPDAEAIFRITEKGI QD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 ASP n 1 4 ASN n 1 5 LEU n 1 6 THR n 1 7 ASP n 1 8 LEU n 1 9 PRO n 1 10 GLY n 1 11 VAL n 1 12 GLY n 1 13 PRO n 1 14 SER n 1 15 THR n 1 16 ALA n 1 17 GLU n 1 18 LYS n 1 19 LEU n 1 20 VAL n 1 21 GLU n 1 22 ALA n 1 23 GLY n 1 24 TYR n 1 25 ILE n 1 26 ASP n 1 27 PHE n 1 28 MET n 1 29 LYS n 1 30 ILE n 1 31 ALA n 1 32 THR n 1 33 ALA n 1 34 THR n 1 35 VAL n 1 36 GLY n 1 37 GLU n 1 38 LEU n 1 39 THR n 1 40 ASP n 1 41 ILE n 1 42 GLU n 1 43 GLY n 1 44 ILE n 1 45 SER n 1 46 GLU n 1 47 LYS n 1 48 ALA n 1 49 ALA n 1 50 ALA n 1 51 LYS n 1 52 MET n 1 53 ILE n 1 54 MET n 1 55 GLY n 1 56 ALA n 1 57 ARG n 1 58 ASP n 1 59 LEU n 1 60 CYS n 1 61 ASP n 1 62 LEU n 1 63 GLY n 1 64 PHE n 1 65 LYS n 1 66 SER n 1 67 GLY n 1 68 ILE n 1 69 ASP n 1 70 LEU n 1 71 LEU n 1 72 LYS n 1 73 GLN n 1 74 ARG n 1 75 SER n 1 76 THR n 1 77 VAL n 1 78 TRP n 1 79 LYS n 1 80 LEU n 1 81 SER n 1 82 THR n 1 83 SER n 1 84 SER n 1 85 SER n 1 86 GLU n 1 87 LEU n 1 88 ASP n 1 89 SER n 1 90 VAL n 1 91 LEU n 1 92 GLY n 1 93 GLY n 1 94 GLY n 1 95 LEU n 1 96 GLU n 1 97 SER n 1 98 GLN n 1 99 SER n 1 100 VAL n 1 101 THR n 1 102 GLU n 1 103 PHE n 1 104 ALA n 1 105 GLY n 1 106 VAL n 1 107 PHE n 1 108 GLY n 1 109 SER n 1 110 GLY n 1 111 LYS n 1 112 THR n 1 113 GLN n 1 114 ILE n 1 115 MET n 1 116 HIS n 1 117 GLN n 1 118 SER n 1 119 CYS n 1 120 VAL n 1 121 ASN n 1 122 LEU n 1 123 GLN n 1 124 ASN n 1 125 PRO n 1 126 GLU n 1 127 PHE n 1 128 LEU n 1 129 PHE n 1 130 TYR n 1 131 ASP n 1 132 GLU n 1 133 GLU n 1 134 ALA n 1 135 VAL n 1 136 SER n 1 137 LYS n 1 138 GLY n 1 139 GLU n 1 140 VAL n 1 141 ALA n 1 142 GLN n 1 143 PRO n 1 144 LYS n 1 145 ALA n 1 146 VAL n 1 147 TYR n 1 148 ILE n 1 149 ASP n 1 150 THR n 1 151 GLU n 1 152 GLY n 1 153 THR n 1 154 PHE n 1 155 ARG n 1 156 PRO n 1 157 GLU n 1 158 ARG n 1 159 ILE n 1 160 MET n 1 161 GLN n 1 162 MET n 1 163 ALA n 1 164 GLU n 1 165 HIS n 1 166 ALA n 1 167 GLY n 1 168 ILE n 1 169 ASP n 1 170 GLY n 1 171 GLN n 1 172 THR n 1 173 VAL n 1 174 LEU n 1 175 ASP n 1 176 ASN n 1 177 THR n 1 178 PHE n 1 179 VAL n 1 180 ALA n 1 181 ARG n 1 182 ALA n 1 183 TYR n 1 184 ASN n 1 185 SER n 1 186 ASP n 1 187 MET n 1 188 GLN n 1 189 MET n 1 190 LEU n 1 191 PHE n 1 192 ALA n 1 193 GLU n 1 194 LYS n 1 195 ILE n 1 196 GLU n 1 197 ASP n 1 198 LEU n 1 199 ILE n 1 200 GLN n 1 201 GLU n 1 202 GLY n 1 203 ASN n 1 204 ASN n 1 205 ILE n 1 206 LYS n 1 207 LEU n 1 208 VAL n 1 209 VAL n 1 210 ILE n 1 211 ASP n 1 212 SER n 1 213 LEU n 1 214 THR n 1 215 SER n 1 216 THR n 1 217 PHE n 1 218 ARG n 1 219 ASN n 1 220 GLU n 1 221 TYR n 1 222 THR n 1 223 GLY n 1 224 ARG n 1 225 GLY n 1 226 LYS n 1 227 LEU n 1 228 ALA n 1 229 GLU n 1 230 ARG n 1 231 GLN n 1 232 GLN n 1 233 LYS n 1 234 LEU n 1 235 GLY n 1 236 ARG n 1 237 HIS n 1 238 MET n 1 239 ALA n 1 240 THR n 1 241 LEU n 1 242 ASN n 1 243 LYS n 1 244 LEU n 1 245 ALA n 1 246 ASP n 1 247 LEU n 1 248 PHE n 1 249 ASN n 1 250 CYS n 1 251 VAL n 1 252 VAL n 1 253 LEU n 1 254 VAL n 1 255 THR n 1 256 ASN n 1 257 GLN n 1 258 VAL n 1 259 SER n 1 260 ALA n 1 261 LYS n 1 262 PRO n 1 263 ASP n 1 264 ALA n 1 265 PHE n 1 266 PHE n 1 267 GLY n 1 268 MET n 1 269 ALA n 1 270 GLU n 1 271 GLN n 1 272 ALA n 1 273 ILE n 1 274 GLY n 1 275 GLY n 1 276 HIS n 1 277 ILE n 1 278 VAL n 1 279 GLY n 1 280 HIS n 1 281 ALA n 1 282 ALA n 1 283 THR n 1 284 PHE n 1 285 ARG n 1 286 PHE n 1 287 PHE n 1 288 VAL n 1 289 ARG n 1 290 LYS n 1 291 GLY n 1 292 LYS n 1 293 GLY n 1 294 ASP n 1 295 LYS n 1 296 ARG n 1 297 VAL n 1 298 ALA n 1 299 LYS n 1 300 LEU n 1 301 TYR n 1 302 ASP n 1 303 SER n 1 304 PRO n 1 305 HIS n 1 306 LEU n 1 307 PRO n 1 308 ASP n 1 309 ALA n 1 310 GLU n 1 311 ALA n 1 312 ILE n 1 313 PHE n 1 314 ARG n 1 315 ILE n 1 316 THR n 1 317 GLU n 1 318 LYS n 1 319 GLY n 1 320 ILE n 1 321 GLN n 1 322 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ARCHAEA _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene radA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanococcus voltae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name bacteria _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-CODONPLUS-RIL _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name SWS _struct_ref.db_code RADA_METVO _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSDNLTDLPGVGPSTAEKLVEAGYIDFMKIATATVGELTDIEGISEKAAAKMIMGARDLCDLGFKSGIDLLKQRSTVWKL STSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIM QMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMAT LNKLADLFNCVVLVTNQVSAKPDAFFGMAEQAIGGHIVGHAATFRFFVRKGKGDKRVAKLYDSPHLPDAEAIFRITEKGI QD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession O73948 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Z4D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 322 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O73948 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 322 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 322 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1Z4D _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 2 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name SWS _struct_ref_seq_dif.pdbx_seq_db_accession_code O73948 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 2 _struct_ref_seq_dif.details ENGINEERED _struct_ref_seq_dif.pdbx_auth_seq_num 2 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ? 'C10 H17 N6 O12 P3' 506.196 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1Z4D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.98 _exptl_crystal.density_percent_sol 58.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.40 _exptl_crystal_grow.pdbx_details '7% PEG 3350, 50 mM Hepes buffer, 50 mM MgCl2, 0.6 M K Ac, pH 7.40, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ENRAF-NONIUS _diffrn_detector.pdbx_collection_date 2004-01-16 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'BRUKERS MIRRORS' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ENRAF-NONIUS _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1Z4D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 2.000 _reflns.number_obs 28217 _reflns.number_all 28273 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.039 _reflns.pdbx_Rsym_value 0.039 _reflns.pdbx_netI_over_av_sigmaI 14.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.1 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.279 _reflns_shell.pdbx_Rsym_value 0.279 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1Z4D _refine.ls_number_reflns_obs 25544 _refine.ls_number_reflns_all 28273 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 90.3 _refine.ls_R_factor_obs 0.221 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.221 _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1249 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'CNS REFINEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1PZN' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2385 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 2521 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 15.00 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.21 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM ? 'X-RAY DIFFRACTION' 2 ANP_XPLOR.PARAM ? 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' 4 ION.PARAM ? 'X-RAY DIFFRACTION' 5 CIS_PEPTIDE.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 1Z4D _struct.title 'RadA recombinase in complex with AMP-PNP and high concentration of K+' _struct.pdbx_descriptor 'DNA repair and recombination protein radA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Z4D _struct_keywords.pdbx_keywords RECOMBINATION _struct_keywords.text 'ATPASE, PROTEIN-ATP COMPLEX, RADA-ADP COMPLEX, CO-FACTORS, POTASSIUM-DEPENDENCE, RECOMBINATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 12 ? ALA A 22 ? GLY A 12 ALA A 22 1 ? 11 HELX_P HELX_P2 2 ASP A 26 ? THR A 32 ? ASP A 26 THR A 32 1 ? 7 HELX_P HELX_P3 3 THR A 34 ? ASP A 40 ? THR A 34 ASP A 40 1 ? 7 HELX_P HELX_P4 4 SER A 45 ? CYS A 60 ? SER A 45 CYS A 60 1 ? 16 HELX_P HELX_P5 5 GLY A 67 ? SER A 75 ? GLY A 67 SER A 75 1 ? 9 HELX_P HELX_P6 6 SER A 84 ? LEU A 91 ? SER A 84 LEU A 91 1 ? 8 HELX_P HELX_P7 7 GLY A 110 ? LEU A 122 ? GLY A 110 LEU A 122 1 ? 13 HELX_P HELX_P8 8 GLN A 123 ? GLU A 126 ? GLN A 123 GLU A 126 5 ? 4 HELX_P HELX_P9 9 SER A 136 ? ALA A 141 ? SER A 136 ALA A 141 5 ? 6 HELX_P HELX_P10 10 ARG A 155 ? ALA A 166 ? ARG A 155 ALA A 166 1 ? 12 HELX_P HELX_P11 11 ASP A 169 ? ASN A 176 ? ASP A 169 ASN A 176 1 ? 8 HELX_P HELX_P12 12 ASN A 184 ? LYS A 194 ? ASN A 184 LYS A 194 1 ? 11 HELX_P HELX_P13 13 LYS A 194 ? GLU A 201 ? LYS A 194 GLU A 201 1 ? 8 HELX_P HELX_P14 14 THR A 214 ? TYR A 221 ? THR A 214 TYR A 221 1 ? 8 HELX_P HELX_P15 15 LYS A 226 ? PHE A 248 ? LYS A 226 PHE A 248 1 ? 23 HELX_P HELX_P16 16 GLY A 274 ? ALA A 282 ? GLY A 274 ALA A 282 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 9 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 95 ? GLU A 96 ? LEU A 95 GLU A 96 A 2 LYS A 79 ? LEU A 80 ? LYS A 79 LEU A 80 A 3 LEU A 128 ? PHE A 129 ? LEU A 128 PHE A 129 B 1 THR A 177 ? ARG A 181 ? THR A 177 ARG A 181 B 2 PRO A 143 ? ASP A 149 ? PRO A 143 ASP A 149 B 3 ASN A 204 ? ASP A 211 ? ASN A 204 ASP A 211 B 4 VAL A 251 ? ASN A 256 ? VAL A 251 ASN A 256 B 5 VAL A 100 ? GLY A 105 ? VAL A 100 GLY A 105 B 6 PHE A 284 ? LYS A 290 ? PHE A 284 LYS A 290 B 7 LYS A 295 ? ASP A 302 ? LYS A 295 ASP A 302 B 8 ALA A 309 ? THR A 316 ? ALA A 309 THR A 316 B 9 GLY A 319 ? GLN A 321 ? GLY A 319 GLN A 321 C 1 VAL A 258 ? SER A 259 ? VAL A 258 SER A 259 C 2 GLN A 271 ? ALA A 272 ? GLN A 271 ALA A 272 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 95 ? O LEU A 95 N LEU A 80 ? N LEU A 80 A 2 3 N LYS A 79 ? N LYS A 79 O PHE A 129 ? O PHE A 129 B 1 2 O PHE A 178 ? O PHE A 178 N TYR A 147 ? N TYR A 147 B 2 3 N ILE A 148 ? N ILE A 148 O VAL A 209 ? O VAL A 209 B 3 4 N VAL A 208 ? N VAL A 208 O LEU A 253 ? O LEU A 253 B 4 5 O VAL A 254 ? O VAL A 254 N PHE A 103 ? N PHE A 103 B 5 6 N GLU A 102 ? N GLU A 102 O PHE A 284 ? O PHE A 284 B 6 7 N PHE A 287 ? N PHE A 287 O LYS A 299 ? O LYS A 299 B 7 8 N ARG A 296 ? N ARG A 296 O PHE A 313 ? O PHE A 313 B 8 9 N THR A 316 ? N THR A 316 O GLY A 319 ? O GLY A 319 C 1 2 N SER A 259 ? N SER A 259 O GLN A 271 ? O GLN A 271 # _database_PDB_matrix.entry_id 1Z4D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Z4D _atom_sites.fract_transf_matrix[1][1] 0.011948 _atom_sites.fract_transf_matrix[1][2] 0.006898 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013796 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009484 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLY 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 ASN 4 4 ? ? ? A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 MET 52 52 52 MET MET A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 MET 54 54 54 MET MET A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 TRP 78 78 78 TRP TRP A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 MET 115 115 115 MET MET A . n A 1 116 HIS 116 116 116 HIS HIS A . n A 1 117 GLN 117 117 117 GLN GLN A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLN 123 123 123 GLN GLN A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 PRO 156 156 156 PRO PRO A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 MET 160 160 160 MET MET A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 MET 162 162 162 MET MET A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 HIS 165 165 165 HIS HIS A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 GLN 171 171 171 GLN GLN A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 TYR 183 183 183 TYR TYR A . n A 1 184 ASN 184 184 184 ASN ASN A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 ASP 186 186 186 ASP ASP A . n A 1 187 MET 187 187 187 MET MET A . n A 1 188 GLN 188 188 188 GLN GLN A . n A 1 189 MET 189 189 189 MET MET A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 PHE 191 191 191 PHE PHE A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 LYS 194 194 194 LYS LYS A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 GLN 200 200 200 GLN GLN A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ASN 203 203 203 ASN ASN A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 ILE 210 210 210 ILE ILE A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 THR 214 214 214 THR THR A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 PHE 217 217 217 PHE PHE A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 ASN 219 219 219 ASN ASN A . n A 1 220 GLU 220 220 220 GLU GLU A . n A 1 221 TYR 221 221 221 TYR TYR A . n A 1 222 THR 222 222 222 THR THR A . n A 1 223 GLY 223 223 223 GLY GLY A . n A 1 224 ARG 224 224 224 ARG ARG A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 LYS 226 226 226 LYS LYS A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 GLN 231 231 231 GLN GLN A . n A 1 232 GLN 232 232 232 GLN GLN A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 ARG 236 236 236 ARG ARG A . n A 1 237 HIS 237 237 237 HIS HIS A . n A 1 238 MET 238 238 238 MET MET A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 THR 240 240 240 THR THR A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 ASN 242 242 242 ASN ASN A . n A 1 243 LYS 243 243 243 LYS LYS A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 ASN 249 249 249 ASN ASN A . n A 1 250 CYS 250 250 250 CYS CYS A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 VAL 254 254 254 VAL VAL A . n A 1 255 THR 255 255 255 THR THR A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 GLN 257 257 257 GLN GLN A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 SER 259 259 259 SER SER A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 LYS 261 261 261 LYS LYS A . n A 1 262 PRO 262 262 ? ? ? A . n A 1 263 ASP 263 263 ? ? ? A . n A 1 264 ALA 264 264 ? ? ? A . n A 1 265 PHE 265 265 ? ? ? A . n A 1 266 PHE 266 266 ? ? ? A . n A 1 267 GLY 267 267 ? ? ? A . n A 1 268 MET 268 268 ? ? ? A . n A 1 269 ALA 269 269 269 ALA ALA A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 GLN 271 271 271 GLN GLN A . n A 1 272 ALA 272 272 272 ALA ALA A . n A 1 273 ILE 273 273 273 ILE ILE A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 GLY 275 275 275 GLY GLY A . n A 1 276 HIS 276 276 276 HIS HIS A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 VAL 278 278 278 VAL VAL A . n A 1 279 GLY 279 279 279 GLY GLY A . n A 1 280 HIS 280 280 280 HIS HIS A . n A 1 281 ALA 281 281 281 ALA ALA A . n A 1 282 ALA 282 282 282 ALA ALA A . n A 1 283 THR 283 283 283 THR THR A . n A 1 284 PHE 284 284 284 PHE PHE A . n A 1 285 ARG 285 285 285 ARG ARG A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 PHE 287 287 287 PHE PHE A . n A 1 288 VAL 288 288 288 VAL VAL A . n A 1 289 ARG 289 289 289 ARG ARG A . n A 1 290 LYS 290 290 290 LYS LYS A . n A 1 291 GLY 291 291 291 GLY GLY A . n A 1 292 LYS 292 292 292 LYS LYS A . n A 1 293 GLY 293 293 293 GLY GLY A . n A 1 294 ASP 294 294 294 ASP ASP A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 ARG 296 296 296 ARG ARG A . n A 1 297 VAL 297 297 297 VAL VAL A . n A 1 298 ALA 298 298 298 ALA ALA A . n A 1 299 LYS 299 299 299 LYS LYS A . n A 1 300 LEU 300 300 300 LEU LEU A . n A 1 301 TYR 301 301 301 TYR TYR A . n A 1 302 ASP 302 302 302 ASP ASP A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 PRO 304 304 304 PRO PRO A . n A 1 305 HIS 305 305 305 HIS HIS A . n A 1 306 LEU 306 306 306 LEU LEU A . n A 1 307 PRO 307 307 307 PRO PRO A . n A 1 308 ASP 308 308 308 ASP ASP A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 GLU 310 310 310 GLU GLU A . n A 1 311 ALA 311 311 311 ALA ALA A . n A 1 312 ILE 312 312 312 ILE ILE A . n A 1 313 PHE 313 313 313 PHE PHE A . n A 1 314 ARG 314 314 314 ARG ARG A . n A 1 315 ILE 315 315 315 ILE ILE A . n A 1 316 THR 316 316 316 THR THR A . n A 1 317 GLU 317 317 317 GLU GLU A . n A 1 318 LYS 318 318 318 LYS LYS A . n A 1 319 GLY 319 319 319 GLY GLY A . n A 1 320 ILE 320 320 320 ILE ILE A . n A 1 321 GLN 321 321 321 GLN GLN A . n A 1 322 ASP 322 322 322 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 501 501 MG MG2 ? . C 2 MG 1 502 502 MG MG2 ? . D 3 K 1 503 503 K K1 ? . E 3 K 1 504 504 K K1 ? . F 3 K 1 506 506 K K1 ? . G 4 ANP 1 401 401 ANP ANP ? . H 5 HOH 1 601 601 HOH TIP ? . H 5 HOH 2 602 602 HOH TIP ? . H 5 HOH 3 603 603 HOH TIP ? . H 5 HOH 4 604 604 HOH TIP ? . H 5 HOH 5 605 605 HOH TIP ? . H 5 HOH 6 606 606 HOH TIP ? . H 5 HOH 7 607 607 HOH TIP ? . H 5 HOH 8 608 608 HOH TIP ? . H 5 HOH 9 609 609 HOH TIP ? . H 5 HOH 10 610 610 HOH TIP ? . H 5 HOH 11 611 611 HOH TIP ? . H 5 HOH 12 612 612 HOH TIP ? . H 5 HOH 13 613 613 HOH TIP ? . H 5 HOH 14 614 614 HOH TIP ? . H 5 HOH 15 615 615 HOH TIP ? . H 5 HOH 16 616 616 HOH TIP ? . H 5 HOH 17 617 617 HOH TIP ? . H 5 HOH 18 618 618 HOH TIP ? . H 5 HOH 19 619 619 HOH TIP ? . H 5 HOH 20 620 620 HOH TIP ? . H 5 HOH 21 621 621 HOH TIP ? . H 5 HOH 22 622 622 HOH TIP ? . H 5 HOH 23 623 623 HOH TIP ? . H 5 HOH 24 624 624 HOH TIP ? . H 5 HOH 25 625 625 HOH TIP ? . H 5 HOH 26 626 626 HOH TIP ? . H 5 HOH 27 627 627 HOH TIP ? . H 5 HOH 28 628 628 HOH TIP ? . H 5 HOH 29 629 629 HOH TIP ? . H 5 HOH 30 630 630 HOH TIP ? . H 5 HOH 31 631 631 HOH TIP ? . H 5 HOH 32 632 632 HOH TIP ? . H 5 HOH 33 633 633 HOH TIP ? . H 5 HOH 34 634 634 HOH TIP ? . H 5 HOH 35 635 635 HOH TIP ? . H 5 HOH 36 636 636 HOH TIP ? . H 5 HOH 37 637 637 HOH TIP ? . H 5 HOH 38 638 638 HOH TIP ? . H 5 HOH 39 639 639 HOH TIP ? . H 5 HOH 40 640 640 HOH TIP ? . H 5 HOH 41 642 642 HOH TIP ? . H 5 HOH 42 643 643 HOH TIP ? . H 5 HOH 43 644 644 HOH TIP ? . H 5 HOH 44 645 645 HOH TIP ? . H 5 HOH 45 646 646 HOH TIP ? . H 5 HOH 46 647 647 HOH TIP ? . H 5 HOH 47 648 648 HOH TIP ? . H 5 HOH 48 649 649 HOH TIP ? . H 5 HOH 49 650 650 HOH TIP ? . H 5 HOH 50 652 652 HOH TIP ? . H 5 HOH 51 653 653 HOH TIP ? . H 5 HOH 52 654 654 HOH TIP ? . H 5 HOH 53 655 655 HOH TIP ? . H 5 HOH 54 656 656 HOH TIP ? . H 5 HOH 55 657 657 HOH TIP ? . H 5 HOH 56 658 658 HOH TIP ? . H 5 HOH 57 659 659 HOH TIP ? . H 5 HOH 58 660 660 HOH TIP ? . H 5 HOH 59 661 661 HOH TIP ? . H 5 HOH 60 662 662 HOH TIP ? . H 5 HOH 61 663 663 HOH TIP ? . H 5 HOH 62 664 664 HOH TIP ? . H 5 HOH 63 666 666 HOH TIP ? . H 5 HOH 64 667 667 HOH TIP ? . H 5 HOH 65 668 668 HOH TIP ? . H 5 HOH 66 670 670 HOH TIP ? . H 5 HOH 67 671 671 HOH TIP ? . H 5 HOH 68 672 672 HOH TIP ? . H 5 HOH 69 673 673 HOH TIP ? . H 5 HOH 70 674 674 HOH TIP ? . H 5 HOH 71 675 675 HOH TIP ? . H 5 HOH 72 676 676 HOH TIP ? . H 5 HOH 73 679 679 HOH TIP ? . H 5 HOH 74 680 680 HOH TIP ? . H 5 HOH 75 682 682 HOH TIP ? . H 5 HOH 76 683 683 HOH TIP ? . H 5 HOH 77 684 684 HOH TIP ? . H 5 HOH 78 685 685 HOH TIP ? . H 5 HOH 79 686 686 HOH TIP ? . H 5 HOH 80 687 687 HOH TIP ? . H 5 HOH 81 688 688 HOH TIP ? . H 5 HOH 82 689 689 HOH TIP ? . H 5 HOH 83 690 690 HOH TIP ? . H 5 HOH 84 691 691 HOH TIP ? . H 5 HOH 85 692 692 HOH TIP ? . H 5 HOH 86 693 693 HOH TIP ? . H 5 HOH 87 694 694 HOH TIP ? . H 5 HOH 88 695 695 HOH TIP ? . H 5 HOH 89 696 696 HOH TIP ? . H 5 HOH 90 697 697 HOH TIP ? . H 5 HOH 91 698 698 HOH TIP ? . H 5 HOH 92 699 699 HOH TIP ? . H 5 HOH 93 701 701 HOH TIP ? . H 5 HOH 94 703 703 HOH TIP ? . H 5 HOH 95 704 704 HOH TIP ? . H 5 HOH 96 705 705 HOH TIP ? . H 5 HOH 97 706 706 HOH TIP ? . H 5 HOH 98 708 708 HOH TIP ? . H 5 HOH 99 709 709 HOH TIP ? . H 5 HOH 100 710 710 HOH TIP ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-10-04 2 'Structure model' 1 1 2006-01-31 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SAINTPLUS 'data collection' . ? 1 PROSCALE 'data reduction' . ? 2 AMoRE 'model building' . ? 3 CNS refinement 1.0 ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 42 ? ? -44.13 -118.61 2 1 SER A 83 ? ? 80.71 -0.30 3 1 SER A 212 ? ? 92.31 90.58 4 1 TYR A 221 ? ? -118.56 63.51 5 1 ARG A 224 ? ? -66.54 14.27 6 1 ASN A 249 ? ? 38.78 54.87 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 . ANP 401 ? "O5'" ? G ANP 1 "O5'" 2 1 N 1 . ANP 401 ? "C5'" ? G ANP 1 "C5'" 3 1 N 1 . ANP 401 ? "C4'" ? G ANP 1 "C4'" 4 1 N 1 . ANP 401 ? "O4'" ? G ANP 1 "O4'" 5 1 N 1 . ANP 401 ? "C3'" ? G ANP 1 "C3'" 6 1 N 1 . ANP 401 ? "O3'" ? G ANP 1 "O3'" 7 1 N 1 . ANP 401 ? "C2'" ? G ANP 1 "C2'" 8 1 N 1 . ANP 401 ? "O2'" ? G ANP 1 "O2'" 9 1 N 1 . ANP 401 ? "C1'" ? G ANP 1 "C1'" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLY 2 ? A GLY 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A ASN 4 ? A ASN 4 5 1 Y 1 A PRO 262 ? A PRO 262 6 1 Y 1 A ASP 263 ? A ASP 263 7 1 Y 1 A ALA 264 ? A ALA 264 8 1 Y 1 A PHE 265 ? A PHE 265 9 1 Y 1 A PHE 266 ? A PHE 266 10 1 Y 1 A GLY 267 ? A GLY 267 11 1 Y 1 A MET 268 ? A MET 268 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'POTASSIUM ION' K 4 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ANP 5 water HOH #