HEADER MEMBRANE PROTEIN,IMMUNE SYSTEM 22-MAR-05 1Z6I TITLE CRYSTAL STRUCTURE OF THE ECTODOMAIN OF DROSOPHILA TRANSMEMBRANE TITLE 2 RECEPTOR PGRP-LCA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN-RECOGNITION PROTEIN-LC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN; COMPND 5 SYNONYM: IMMUNE RESPONSE DEFICIENT 7 PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: PGRP-LC, IRD7, PGRPLC; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBAC-HTA KEYWDS MIXED BETA-SHEET, 3/10 HELIX, MEMBRANE PROTEIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR C.-I.CHANG,K.IHARA,Y.CHELLIAH,D.MENGIN-LECREULX,S.WAKATSUKI, AUTHOR 2 J.DEISENHOFER REVDAT 6 13-NOV-24 1Z6I 1 HETSYN REVDAT 5 29-JUL-20 1Z6I 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 13-JUL-11 1Z6I 1 VERSN REVDAT 3 24-FEB-09 1Z6I 1 VERSN REVDAT 2 30-AUG-05 1Z6I 1 JRNL REVDAT 1 19-JUL-05 1Z6I 0 JRNL AUTH C.-I.CHANG,K.IHARA,Y.CHELLIAH,D.MENGIN-LECREULX,S.WAKATSUKI, JRNL AUTH 2 J.DEISENHOFER JRNL TITL STRUCTURE OF THE ECTODOMAIN OF DROSOPHILA JRNL TITL 2 PEPTIDOGLYCAN-RECOGNITION PROTEIN LCA SUGGESTS A MOLECULAR JRNL TITL 3 MECHANISM FOR PATTERN RECOGNITION JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 10279 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 16006509 JRNL DOI 10.1073/PNAS.0504547102 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 7002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.500 REMARK 3 FREE R VALUE TEST SET COUNT : 405 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 505 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.3960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1316 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.272 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1371 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1215 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1864 ; 1.268 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2829 ; 0.803 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 166 ; 6.452 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 206 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1498 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 273 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 252 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1375 ; 0.234 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 804 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 32 ; 0.185 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.205 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 39 ; 0.200 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 832 ; 0.549 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1342 ; 1.082 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 539 ; 1.483 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 522 ; 2.666 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Z6I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 74.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.55800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, PHOSPHATE CITRATE, REMARK 280 PH 4.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 52.89950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.89950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.89950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.89950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.89950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.89950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 52.89950 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 52.89950 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 52.89950 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 52.89950 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 52.89950 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 52.89950 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 52.89950 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 52.89950 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 52.89950 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 52.89950 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 52.89950 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 52.89950 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 79.34925 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 26.44975 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 26.44975 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 79.34925 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 79.34925 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 79.34925 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 26.44975 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 26.44975 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 79.34925 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 26.44975 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 79.34925 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 26.44975 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 79.34925 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 26.44975 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 26.44975 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 26.44975 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 79.34925 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 26.44975 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 79.34925 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 79.34925 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 79.34925 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 26.44975 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 26.44975 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 79.34925 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 79.34925 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 26.44975 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 26.44975 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 26.44975 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 26.44975 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 79.34925 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 26.44975 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 79.34925 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 26.44975 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 79.34925 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 79.34925 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 79.34925 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 372 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 507 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 506 -75.52 -112.98 REMARK 500 ASP A 507 -55.85 100.76 REMARK 500 REMARK 500 REMARK: NULL DBREF 1Z6I A 354 520 UNP Q9GNK5 PGPLC_DROME 354 520 SEQADV 1Z6I ASP A 354 UNP Q9GNK5 ARG 354 CLONING ARTIFACT SEQRES 1 A 167 ASP PHE VAL GLU ARG GLN GLN TRP LEU ALA GLN PRO PRO SEQRES 2 A 167 GLN LYS GLU ILE PRO ASP LEU GLU LEU PRO VAL GLY LEU SEQRES 3 A 167 VAL ILE ALA LEU PRO THR ASN SER GLU ASN CYS SER THR SEQRES 4 A 167 GLN ALA ILE CYS VAL LEU ARG VAL ARG LEU LEU GLN THR SEQRES 5 A 167 TYR ASP ILE GLU SER SER GLN LYS CYS ASP ILE ALA TYR SEQRES 6 A 167 ASN PHE LEU ILE GLY GLY ASP GLY ASN VAL TYR VAL GLY SEQRES 7 A 167 ARG GLY TRP ASN LYS MET GLY ALA HIS MET ASN ASN ILE SEQRES 8 A 167 ASN TYR ASP SER GLN SER LEU SER PHE ALA TYR ILE GLY SEQRES 9 A 167 SER PHE LYS THR ILE GLN PRO SER ALA LYS GLN LEU SER SEQRES 10 A 167 VAL THR ARG LEU LEU LEU GLU ARG GLY VAL LYS LEU GLY SEQRES 11 A 167 LYS ILE ALA PRO SER TYR ARG PHE THR ALA SER SER LYS SEQRES 12 A 167 LEU MET PRO SER VAL THR ASP PHE LYS ALA ASP ALA LEU SEQRES 13 A 167 TYR ALA SER PHE ALA ASN TRP THR HIS TRP SER MODRES 1Z6I ASN A 389 ASN GLYCOSYLATION SITE HET NAG A 999 14 HET SO4 A 201 5 HET SO4 A 202 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG C8 H15 N O6 FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *25(H2 O) HELIX 1 1 THR A 392 SER A 410 1 19 HELIX 2 2 ASN A 443 SER A 448 1 6 HELIX 3 3 SER A 465 LEU A 482 1 18 HELIX 4 4 SER A 494 MET A 498 1 5 HELIX 5 5 VAL A 501 LYS A 505 5 5 HELIX 6 6 ASP A 507 SER A 512 1 6 SHEET 1 A 6 PHE A 355 VAL A 356 0 SHEET 2 A 6 VAL A 428 VAL A 430 1 O VAL A 428 N VAL A 356 SHEET 3 A 6 PHE A 420 ILE A 422 -1 N LEU A 421 O TYR A 429 SHEET 4 A 6 LEU A 451 TYR A 455 1 O ALA A 454 N ILE A 422 SHEET 5 A 6 VAL A 377 PRO A 384 1 N LEU A 383 O TYR A 455 SHEET 6 A 6 ILE A 485 ALA A 493 1 O ALA A 486 N VAL A 377 SSBOND 1 CYS A 390 CYS A 396 1555 1555 2.04 LINK ND2 ASN A 389 C1 NAG A 999 1555 1555 1.45 CISPEP 1 LEU A 375 PRO A 376 0 -5.83 CRYST1 105.799 105.799 105.799 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009452 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009452 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009452 0.00000