data_1Z8J # _entry.id 1Z8J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Z8J pdb_00001z8j 10.2210/pdb1z8j/pdb RCSB RCSB032432 ? ? WWPDB D_1000032432 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-05-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-02-27 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2021-10-20 7 'Structure model' 1 6 2023-08-23 8 'Structure model' 1 7 2024-03-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Database references' 13 6 'Structure model' 'Structure summary' 14 7 'Structure model' 'Data collection' 15 7 'Structure model' 'Refinement description' 16 8 'Structure model' 'Source and taxonomy' 17 8 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp 2 5 'Structure model' entity 3 5 'Structure model' pdbx_chem_comp_identifier 4 5 'Structure model' pdbx_entity_nonpoly 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site 8 5 'Structure model' struct_site_gen 9 6 'Structure model' chem_comp 10 6 'Structure model' database_2 11 6 'Structure model' struct_ref_seq_dif 12 7 'Structure model' chem_comp_atom 13 7 'Structure model' chem_comp_bond 14 7 'Structure model' pdbx_initial_refinement_model 15 8 'Structure model' entity 16 8 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_chem_comp.name' 2 5 'Structure model' '_chem_comp.type' 3 5 'Structure model' '_entity.pdbx_description' 4 5 'Structure model' '_pdbx_entity_nonpoly.name' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_PDB_ins_code' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_PDB_ins_code' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 23 5 'Structure model' '_pdbx_struct_conn_angle.value' 24 5 'Structure model' '_struct_conn.conn_type_id' 25 5 'Structure model' '_struct_conn.id' 26 5 'Structure model' '_struct_conn.pdbx_dist_value' 27 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 28 5 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 29 5 'Structure model' '_struct_conn.pdbx_ptnr2_PDB_ins_code' 30 5 'Structure model' '_struct_conn.pdbx_role' 31 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 5 'Structure model' '_struct_conn.ptnr1_symmetry' 39 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 46 5 'Structure model' '_struct_conn.ptnr2_symmetry' 47 6 'Structure model' '_chem_comp.pdbx_synonyms' 48 6 'Structure model' '_database_2.pdbx_DOI' 49 6 'Structure model' '_database_2.pdbx_database_accession' 50 6 'Structure model' '_struct_ref_seq_dif.details' 51 8 'Structure model' '_entity.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Z8J _pdbx_database_status.recvd_initial_deposition_date 2005-03-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1Z8I _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bobofchak, K.M.' 1 'Pineda, A.O.' 2 'Mathews, F.S.' 3 'Di Cera, E.' 4 # _citation.id primary _citation.title 'Energetic and structural consequences of perturbing Gly-193 in the oxyanion hole of serine proteases' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 280 _citation.page_first 25644 _citation.page_last 25650 _citation.year 2005 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15890651 _citation.pdbx_database_id_DOI 10.1074/jbc.M503499200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bobofchak, K.M.' 1 ? primary 'Pineda, A.O.' 2 ? primary 'Mathews, F.S.' 3 ? primary 'Di Cera, E.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thrombin light chain' 4646.150 1 3.4.21.5 G193P 'sequence database residues 322-361' ? 2 polymer man 'Thrombin heavy chain' 29820.285 1 3.4.21.5 ? 'sequence database residues 364-622' ? 3 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? 'The peptide was chemically synthesized. It is the inhibitor PPACK which was purchased from Calbiochem.' 4 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 water nat water 18.015 249 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYID TFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYID A ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEPDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEPDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 'SODIUM ION' NA 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 PHE n 1 4 ASN n 1 5 PRO n 1 6 ARG n 1 7 THR n 1 8 PHE n 1 9 GLY n 1 10 SER n 1 11 GLY n 1 12 GLU n 1 13 ALA n 1 14 ASP n 1 15 CYS n 1 16 GLY n 1 17 LEU n 1 18 ARG n 1 19 PRO n 1 20 LEU n 1 21 PHE n 1 22 GLU n 1 23 LYS n 1 24 LYS n 1 25 SER n 1 26 LEU n 1 27 GLU n 1 28 ASP n 1 29 LYS n 1 30 THR n 1 31 GLU n 1 32 ARG n 1 33 GLU n 1 34 LEU n 1 35 LEU n 1 36 GLU n 1 37 SER n 1 38 TYR n 1 39 ILE n 1 40 ASP n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 PRO n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo F2 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'Chinese hamster' 'Cricetulus griseus' 10029 Cricetulus ? kidney ? ? ? plasmid ? ? ? ? ? ? ? vector HPC4-pNUT ? ? ? ? ? 2 1 sample ? ? ? human Homo F2 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'Chinese hamster' 'Cricetulus griseus' 10029 Cricetulus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' PPACK 'C21 H34 Cl N6 O3 1' 453.986 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A N n A 1 2 PHE 2 1 1 PHE PHE A M n A 1 3 PHE 3 1 1 PHE PHE A L n A 1 4 ASN 4 1 1 ASN ASN A K n A 1 5 PRO 5 1 1 PRO PRO A J n A 1 6 ARG 6 1 1 ARG ARG A I n A 1 7 THR 7 1 1 THR THR A H n A 1 8 PHE 8 1 1 PHE PHE A G n A 1 9 GLY 9 1 1 GLY GLY A F n A 1 10 SER 10 1 1 SER SER A E n A 1 11 GLY 11 1 1 GLY GLY A D n A 1 12 GLU 12 1 1 GLU GLU A C n A 1 13 ALA 13 1 1 ALA ALA A B n A 1 14 ASP 14 1 1 ASP ASP A A n A 1 15 CYS 15 1 1 CYS CYS A . n A 1 16 GLY 16 2 2 GLY GLY A . n A 1 17 LEU 17 3 3 LEU LEU A . n A 1 18 ARG 18 4 4 ARG ARG A . n A 1 19 PRO 19 5 5 PRO PRO A . n A 1 20 LEU 20 6 6 LEU LEU A . n A 1 21 PHE 21 7 7 PHE PHE A . n A 1 22 GLU 22 8 8 GLU GLU A . n A 1 23 LYS 23 9 9 LYS LYS A . n A 1 24 LYS 24 10 10 LYS LYS A . n A 1 25 SER 25 11 11 SER SER A . n A 1 26 LEU 26 12 12 LEU LEU A . n A 1 27 GLU 27 13 13 GLU GLU A . n A 1 28 ASP 28 14 14 ASP ASP A . n A 1 29 LYS 29 14 14 LYS LYS A A n A 1 30 THR 30 14 14 THR THR A B n A 1 31 GLU 31 14 14 GLU GLU A C n A 1 32 ARG 32 14 14 ARG ARG A D n A 1 33 GLU 33 14 14 GLU GLU A E n A 1 34 LEU 34 14 14 LEU LEU A F n A 1 35 LEU 35 14 14 LEU LEU A G n A 1 36 GLU 36 14 14 GLU GLU A H n A 1 37 SER 37 14 14 SER SER A I n A 1 38 TYR 38 14 14 TYR TYR A J n A 1 39 ILE 39 14 14 ILE ILE A K n A 1 40 ASP 40 14 14 ASP ASP A L n B 2 1 ILE 1 16 16 ILE ILE B . n B 2 2 VAL 2 17 17 VAL VAL B . n B 2 3 GLU 3 18 18 GLU GLU B . n B 2 4 GLY 4 19 19 GLY GLY B . n B 2 5 SER 5 20 20 SER SER B . n B 2 6 ASP 6 21 21 ASP ASP B . n B 2 7 ALA 7 22 22 ALA ALA B . n B 2 8 GLU 8 23 23 GLU GLU B . n B 2 9 ILE 9 24 24 ILE ILE B . n B 2 10 GLY 10 25 25 GLY GLY B . n B 2 11 MET 11 26 26 MET MET B . n B 2 12 SER 12 27 27 SER SER B . n B 2 13 PRO 13 28 28 PRO PRO B . n B 2 14 TRP 14 29 29 TRP TRP B . n B 2 15 GLN 15 30 30 GLN GLN B . n B 2 16 VAL 16 31 31 VAL VAL B . n B 2 17 MET 17 32 32 MET MET B . n B 2 18 LEU 18 33 33 LEU LEU B . n B 2 19 PHE 19 34 34 PHE PHE B . n B 2 20 ARG 20 35 35 ARG ARG B . n B 2 21 LYS 21 36 36 LYS LYS B . n B 2 22 SER 22 36 36 SER SER B A n B 2 23 PRO 23 37 37 PRO PRO B . n B 2 24 GLN 24 38 38 GLN GLN B . n B 2 25 GLU 25 39 39 GLU GLU B . n B 2 26 LEU 26 40 40 LEU LEU B . n B 2 27 LEU 27 41 41 LEU LEU B . n B 2 28 CYS 28 42 42 CYS CYS B . n B 2 29 GLY 29 43 43 GLY GLY B . n B 2 30 ALA 30 44 44 ALA ALA B . n B 2 31 SER 31 45 45 SER SER B . n B 2 32 LEU 32 46 46 LEU LEU B . n B 2 33 ILE 33 47 47 ILE ILE B . n B 2 34 SER 34 48 48 SER SER B . n B 2 35 ASP 35 49 49 ASP ASP B . n B 2 36 ARG 36 50 50 ARG ARG B . n B 2 37 TRP 37 51 51 TRP TRP B . n B 2 38 VAL 38 52 52 VAL VAL B . n B 2 39 LEU 39 53 53 LEU LEU B . n B 2 40 THR 40 54 54 THR THR B . n B 2 41 ALA 41 55 55 ALA ALA B . n B 2 42 ALA 42 56 56 ALA ALA B . n B 2 43 HIS 43 57 57 HIS HIS B . n B 2 44 CYS 44 58 58 CYS CYS B . n B 2 45 LEU 45 59 59 LEU LEU B . n B 2 46 LEU 46 60 60 LEU LEU B . n B 2 47 TYR 47 60 60 TYR TYR B A n B 2 48 PRO 48 60 60 PRO PRO B B n B 2 49 PRO 49 60 60 PRO PRO B C n B 2 50 TRP 50 60 60 TRP TRP B D n B 2 51 ASP 51 60 60 ASP ASP B E n B 2 52 LYS 52 60 60 LYS LYS B F n B 2 53 ASN 53 60 60 ASN ASN B G n B 2 54 PHE 54 60 60 PHE PHE B H n B 2 55 THR 55 60 60 THR THR B I n B 2 56 GLU 56 61 61 GLU GLU B . n B 2 57 ASN 57 62 62 ASN ASN B . n B 2 58 ASP 58 63 63 ASP ASP B . n B 2 59 LEU 59 64 64 LEU LEU B . n B 2 60 LEU 60 65 65 LEU LEU B . n B 2 61 VAL 61 66 66 VAL VAL B . n B 2 62 ARG 62 67 67 ARG ARG B . n B 2 63 ILE 63 68 68 ILE ILE B . n B 2 64 GLY 64 69 69 GLY GLY B . n B 2 65 LYS 65 70 70 LYS LYS B . n B 2 66 HIS 66 71 71 HIS HIS B . n B 2 67 SER 67 71 ? ? ? B A n B 2 68 ARG 68 71 ? ? ? B B n B 2 69 THR 69 71 ? ? ? B C n B 2 70 ARG 70 71 ? ? ? B D n B 2 71 TYR 71 71 ? ? ? B E n B 2 72 GLU 72 71 ? ? ? B F n B 2 73 ARG 73 77 77 ARG ARG B A n B 2 74 ASN 74 78 78 ASN ASN B . n B 2 75 ILE 75 79 79 ILE ILE B . n B 2 76 GLU 76 80 80 GLU GLU B . n B 2 77 LYS 77 81 81 LYS LYS B . n B 2 78 ILE 78 82 82 ILE ILE B . n B 2 79 SER 79 83 83 SER SER B . n B 2 80 MET 80 84 84 MET MET B . n B 2 81 LEU 81 85 85 LEU LEU B . n B 2 82 GLU 82 86 86 GLU GLU B . n B 2 83 LYS 83 87 87 LYS LYS B . n B 2 84 ILE 84 88 88 ILE ILE B . n B 2 85 TYR 85 89 89 TYR TYR B . n B 2 86 ILE 86 90 90 ILE ILE B . n B 2 87 HIS 87 91 91 HIS HIS B . n B 2 88 PRO 88 92 92 PRO PRO B . n B 2 89 ARG 89 93 93 ARG ARG B . n B 2 90 TYR 90 94 94 TYR TYR B . n B 2 91 ASN 91 95 95 ASN ASN B . n B 2 92 TRP 92 96 96 TRP TRP B . n B 2 93 ARG 93 97 97 ARG ARG B . n B 2 94 GLU 94 97 97 GLU GLU B A n B 2 95 ASN 95 98 98 ASN ASN B . n B 2 96 LEU 96 99 99 LEU LEU B . n B 2 97 ASP 97 100 100 ASP ASP B . n B 2 98 ARG 98 101 101 ARG ARG B . n B 2 99 ASP 99 102 102 ASP ASP B . n B 2 100 ILE 100 103 103 ILE ILE B . n B 2 101 ALA 101 104 104 ALA ALA B . n B 2 102 LEU 102 105 105 LEU LEU B . n B 2 103 MET 103 106 106 MET MET B . n B 2 104 LYS 104 107 107 LYS LYS B . n B 2 105 LEU 105 108 108 LEU LEU B . n B 2 106 LYS 106 109 109 LYS LYS B . n B 2 107 LYS 107 110 110 LYS LYS B . n B 2 108 PRO 108 111 111 PRO PRO B . n B 2 109 VAL 109 112 112 VAL VAL B . n B 2 110 ALA 110 113 113 ALA ALA B . n B 2 111 PHE 111 114 114 PHE PHE B . n B 2 112 SER 112 115 115 SER SER B . n B 2 113 ASP 113 116 116 ASP ASP B . n B 2 114 TYR 114 117 117 TYR TYR B . n B 2 115 ILE 115 118 118 ILE ILE B . n B 2 116 HIS 116 119 119 HIS HIS B . n B 2 117 PRO 117 120 120 PRO PRO B . n B 2 118 VAL 118 121 121 VAL VAL B . n B 2 119 CYS 119 122 122 CYS CYS B . n B 2 120 LEU 120 123 123 LEU LEU B . n B 2 121 PRO 121 124 124 PRO PRO B . n B 2 122 ASP 122 125 125 ASP ASP B . n B 2 123 ARG 123 126 126 ARG ARG B . n B 2 124 GLU 124 127 127 GLU GLU B . n B 2 125 THR 125 128 128 THR THR B . n B 2 126 ALA 126 129 129 ALA ALA B . n B 2 127 ALA 127 129 129 ALA ALA B A n B 2 128 SER 128 129 129 SER SER B B n B 2 129 LEU 129 129 129 LEU LEU B C n B 2 130 LEU 130 130 130 LEU LEU B . n B 2 131 GLN 131 131 131 GLN GLN B . n B 2 132 ALA 132 132 132 ALA ALA B . n B 2 133 GLY 133 133 133 GLY GLY B . n B 2 134 TYR 134 134 134 TYR TYR B . n B 2 135 LYS 135 135 135 LYS LYS B . n B 2 136 GLY 136 136 136 GLY GLY B . n B 2 137 ARG 137 137 137 ARG ARG B . n B 2 138 VAL 138 138 138 VAL VAL B . n B 2 139 THR 139 139 139 THR THR B . n B 2 140 GLY 140 140 140 GLY GLY B . n B 2 141 TRP 141 141 141 TRP TRP B . n B 2 142 GLY 142 142 142 GLY GLY B . n B 2 143 ASN 143 143 143 ASN ASN B . n B 2 144 LEU 144 144 144 LEU LEU B . n B 2 145 LYS 145 145 145 LYS LYS B . n B 2 146 GLU 146 146 146 GLU GLU B . n B 2 147 THR 147 147 147 THR THR B . n B 2 148 TRP 148 147 ? ? ? B A n B 2 149 THR 149 147 ? ? ? B B n B 2 150 ALA 150 147 ? ? ? B C n B 2 151 ASN 151 147 ? ? ? B D n B 2 152 VAL 152 147 ? ? ? B E n B 2 153 GLY 153 147 ? ? ? B F n B 2 154 LYS 154 147 ? ? ? B G n B 2 155 GLY 155 147 ? ? ? B H n B 2 156 GLN 156 151 151 GLN GLN B . n B 2 157 PRO 157 152 152 PRO PRO B . n B 2 158 SER 158 153 153 SER SER B . n B 2 159 VAL 159 154 154 VAL VAL B . n B 2 160 LEU 160 155 155 LEU LEU B . n B 2 161 GLN 161 156 156 GLN GLN B . n B 2 162 VAL 162 157 157 VAL VAL B . n B 2 163 VAL 163 158 158 VAL VAL B . n B 2 164 ASN 164 159 159 ASN ASN B . n B 2 165 LEU 165 160 160 LEU LEU B . n B 2 166 PRO 166 161 161 PRO PRO B . n B 2 167 ILE 167 162 162 ILE ILE B . n B 2 168 VAL 168 163 163 VAL VAL B . n B 2 169 GLU 169 164 164 GLU GLU B . n B 2 170 ARG 170 165 165 ARG ARG B . n B 2 171 PRO 171 166 166 PRO PRO B . n B 2 172 VAL 172 167 167 VAL VAL B . n B 2 173 CYS 173 168 168 CYS CYS B . n B 2 174 LYS 174 169 169 LYS LYS B . n B 2 175 ASP 175 170 170 ASP ASP B . n B 2 176 SER 176 171 171 SER SER B . n B 2 177 THR 177 172 172 THR THR B . n B 2 178 ARG 178 173 173 ARG ARG B . n B 2 179 ILE 179 174 174 ILE ILE B . n B 2 180 ARG 180 175 175 ARG ARG B . n B 2 181 ILE 181 176 176 ILE ILE B . n B 2 182 THR 182 177 177 THR THR B . n B 2 183 ASP 183 178 178 ASP ASP B . n B 2 184 ASN 184 179 179 ASN ASN B . n B 2 185 MET 185 180 180 MET MET B . n B 2 186 PHE 186 181 181 PHE PHE B . n B 2 187 CYS 187 182 182 CYS CYS B . n B 2 188 ALA 188 183 183 ALA ALA B . n B 2 189 GLY 189 184 184 GLY GLY B . n B 2 190 TYR 190 184 184 TYR TYR B A n B 2 191 LYS 191 185 185 LYS LYS B . n B 2 192 PRO 192 186 186 PRO PRO B . n B 2 193 ASP 193 186 186 ASP ASP B A n B 2 194 GLU 194 186 186 GLU GLU B B n B 2 195 GLY 195 186 186 GLY GLY B C n B 2 196 LYS 196 186 186 LYS LYS B D n B 2 197 ARG 197 187 187 ARG ARG B . n B 2 198 GLY 198 188 188 GLY GLY B . n B 2 199 ASP 199 189 189 ASP ASP B . n B 2 200 ALA 200 190 190 ALA ALA B . n B 2 201 CYS 201 191 191 CYS CYS B . n B 2 202 GLU 202 192 192 GLU GLU B . n B 2 203 PRO 203 193 193 PRO PRO B . n B 2 204 ASP 204 194 194 ASP ASP B . n B 2 205 SER 205 195 195 SER SER B . n B 2 206 GLY 206 196 196 GLY GLY B . n B 2 207 GLY 207 197 197 GLY GLY B . n B 2 208 PRO 208 198 198 PRO PRO B . n B 2 209 PHE 209 199 199 PHE PHE B . n B 2 210 VAL 210 200 200 VAL VAL B . n B 2 211 MET 211 201 201 MET MET B . n B 2 212 LYS 212 202 202 LYS LYS B . n B 2 213 SER 213 203 203 SER SER B . n B 2 214 PRO 214 204 204 PRO PRO B . n B 2 215 PHE 215 204 204 PHE PHE B A n B 2 216 ASN 216 204 204 ASN ASN B B n B 2 217 ASN 217 205 205 ASN ASN B . n B 2 218 ARG 218 206 206 ARG ARG B . n B 2 219 TRP 219 207 207 TRP TRP B . n B 2 220 TYR 220 208 208 TYR TYR B . n B 2 221 GLN 221 209 209 GLN GLN B . n B 2 222 MET 222 210 210 MET MET B . n B 2 223 GLY 223 211 211 GLY GLY B . n B 2 224 ILE 224 212 212 ILE ILE B . n B 2 225 VAL 225 213 213 VAL VAL B . n B 2 226 SER 226 214 214 SER SER B . n B 2 227 TRP 227 215 215 TRP TRP B . n B 2 228 GLY 228 216 216 GLY GLY B . n B 2 229 GLU 229 217 217 GLU GLU B . n B 2 230 GLY 230 219 219 GLY GLY B . n B 2 231 CYS 231 220 220 CYS CYS B . n B 2 232 ASP 232 221 221 ASP ASP B A n B 2 233 ARG 233 221 221 ARG ARG B . n B 2 234 ASP 234 222 222 ASP ASP B . n B 2 235 GLY 235 223 223 GLY GLY B . n B 2 236 LYS 236 224 224 LYS LYS B . n B 2 237 TYR 237 225 225 TYR TYR B . n B 2 238 GLY 238 226 226 GLY GLY B . n B 2 239 PHE 239 227 227 PHE PHE B . n B 2 240 TYR 240 228 228 TYR TYR B . n B 2 241 THR 241 229 229 THR THR B . n B 2 242 HIS 242 230 230 HIS HIS B . n B 2 243 VAL 243 231 231 VAL VAL B . n B 2 244 PHE 244 232 232 PHE PHE B . n B 2 245 ARG 245 233 233 ARG ARG B . n B 2 246 LEU 246 234 234 LEU LEU B . n B 2 247 LYS 247 235 235 LYS LYS B . n B 2 248 LYS 248 236 236 LYS LYS B . n B 2 249 TRP 249 237 237 TRP TRP B . n B 2 250 ILE 250 238 238 ILE ILE B . n B 2 251 GLN 251 239 239 GLN GLN B . n B 2 252 LYS 252 240 240 LYS LYS B . n B 2 253 VAL 253 241 241 VAL VAL B . n B 2 254 ILE 254 242 242 ILE ILE B . n B 2 255 ASP 255 243 243 ASP ASP B . n B 2 256 GLN 256 244 244 GLN GLN B . n B 2 257 PHE 257 245 245 PHE PHE B . n B 2 258 GLY 258 246 ? ? ? B . n B 2 259 GLU 259 247 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 15 2 ZN ZN A . D 4 0G6 1 301 301 0G6 DPN B . E 5 NAG 1 600 600 NAG NAG B . F 3 ZN 1 1 1 ZN ZN B . G 3 ZN 1 4 4 ZN ZN B . H 6 NA 1 601 601 NA NA B . I 7 HOH 1 301 301 HOH HOH A . I 7 HOH 2 310 310 HOH HOH A . I 7 HOH 3 331 331 HOH HOH A . I 7 HOH 4 339 339 HOH HOH A . I 7 HOH 5 340 340 HOH HOH A . I 7 HOH 6 342 342 HOH HOH A . I 7 HOH 7 344 344 HOH HOH A . I 7 HOH 8 345 345 HOH HOH A . I 7 HOH 9 348 348 HOH HOH A . I 7 HOH 10 349 349 HOH HOH A . I 7 HOH 11 351 351 HOH HOH A . I 7 HOH 12 352 352 HOH HOH A . I 7 HOH 13 353 353 HOH HOH A . I 7 HOH 14 354 354 HOH HOH A . I 7 HOH 15 358 358 HOH HOH A . I 7 HOH 16 359 359 HOH HOH A . I 7 HOH 17 362 362 HOH HOH A . I 7 HOH 18 363 363 HOH HOH A . I 7 HOH 19 365 365 HOH HOH A . I 7 HOH 20 366 366 HOH HOH A . I 7 HOH 21 373 373 HOH HOH A . I 7 HOH 22 381 381 HOH HOH A . I 7 HOH 23 383 383 HOH HOH A . I 7 HOH 24 409 409 HOH HOH A . I 7 HOH 25 439 439 HOH HOH A . I 7 HOH 26 441 441 HOH HOH A . I 7 HOH 27 442 442 HOH HOH A . I 7 HOH 28 443 443 HOH HOH A . I 7 HOH 29 448 448 HOH HOH A . I 7 HOH 30 449 449 HOH HOH A . I 7 HOH 31 451 451 HOH HOH A . I 7 HOH 32 452 452 HOH HOH A . I 7 HOH 33 455 455 HOH HOH A . I 7 HOH 34 456 456 HOH HOH A . I 7 HOH 35 457 457 HOH HOH A . I 7 HOH 36 458 458 HOH HOH A . I 7 HOH 37 459 459 HOH HOH A . I 7 HOH 38 460 460 HOH HOH A . I 7 HOH 39 461 461 HOH HOH A . I 7 HOH 40 462 462 HOH HOH A . I 7 HOH 41 463 463 HOH HOH A . I 7 HOH 42 465 465 HOH HOH A . I 7 HOH 43 467 467 HOH HOH A . I 7 HOH 44 468 468 HOH HOH A . I 7 HOH 45 516 516 HOH HOH A . I 7 HOH 46 518 518 HOH HOH A . I 7 HOH 47 520 520 HOH HOH A . I 7 HOH 48 528 528 HOH HOH A . I 7 HOH 49 537 537 HOH HOH A . I 7 HOH 50 538 538 HOH HOH A . I 7 HOH 51 539 539 HOH HOH A . I 7 HOH 52 542 542 HOH HOH A . I 7 HOH 53 543 543 HOH HOH A . I 7 HOH 54 547 547 HOH HOH A . I 7 HOH 55 551 551 HOH HOH A . I 7 HOH 56 552 552 HOH HOH A . J 7 HOH 1 302 302 HOH HOH B . J 7 HOH 2 303 303 HOH HOH B . J 7 HOH 3 304 304 HOH HOH B . J 7 HOH 4 305 305 HOH HOH B . J 7 HOH 5 306 306 HOH HOH B . J 7 HOH 6 307 307 HOH HOH B . J 7 HOH 7 308 308 HOH HOH B . J 7 HOH 8 309 309 HOH HOH B . J 7 HOH 9 311 311 HOH HOH B . J 7 HOH 10 312 312 HOH HOH B . J 7 HOH 11 313 313 HOH HOH B . J 7 HOH 12 314 314 HOH HOH B . J 7 HOH 13 315 315 HOH HOH B . J 7 HOH 14 316 316 HOH HOH B . J 7 HOH 15 317 317 HOH HOH B . J 7 HOH 16 318 318 HOH HOH B . J 7 HOH 17 319 319 HOH HOH B . J 7 HOH 18 320 320 HOH HOH B . J 7 HOH 19 321 321 HOH HOH B . J 7 HOH 20 322 322 HOH HOH B . J 7 HOH 21 323 323 HOH HOH B . J 7 HOH 22 324 324 HOH HOH B . J 7 HOH 23 325 325 HOH HOH B . J 7 HOH 24 326 326 HOH HOH B . J 7 HOH 25 327 327 HOH HOH B . J 7 HOH 26 328 328 HOH HOH B . J 7 HOH 27 329 329 HOH HOH B . J 7 HOH 28 330 330 HOH HOH B . J 7 HOH 29 332 332 HOH HOH B . J 7 HOH 30 333 333 HOH HOH B . J 7 HOH 31 334 334 HOH HOH B . J 7 HOH 32 335 335 HOH HOH B . J 7 HOH 33 336 336 HOH HOH B . J 7 HOH 34 337 337 HOH HOH B . J 7 HOH 35 338 338 HOH HOH B . J 7 HOH 36 341 341 HOH HOH B . J 7 HOH 37 343 343 HOH HOH B . J 7 HOH 38 346 346 HOH HOH B . J 7 HOH 39 347 347 HOH HOH B . J 7 HOH 40 350 350 HOH HOH B . J 7 HOH 41 355 355 HOH HOH B . J 7 HOH 42 356 356 HOH HOH B . J 7 HOH 43 357 357 HOH HOH B . J 7 HOH 44 360 360 HOH HOH B . J 7 HOH 45 361 361 HOH HOH B . J 7 HOH 46 364 364 HOH HOH B . J 7 HOH 47 367 367 HOH HOH B . J 7 HOH 48 368 368 HOH HOH B . J 7 HOH 49 369 369 HOH HOH B . J 7 HOH 50 370 370 HOH HOH B . J 7 HOH 51 371 371 HOH HOH B . J 7 HOH 52 372 372 HOH HOH B . J 7 HOH 53 374 374 HOH HOH B . J 7 HOH 54 375 375 HOH HOH B . J 7 HOH 55 376 376 HOH HOH B . J 7 HOH 56 377 377 HOH HOH B . J 7 HOH 57 378 378 HOH HOH B . J 7 HOH 58 379 379 HOH HOH B . J 7 HOH 59 380 380 HOH HOH B . J 7 HOH 60 382 382 HOH HOH B . J 7 HOH 61 384 384 HOH HOH B . J 7 HOH 62 385 385 HOH HOH B . J 7 HOH 63 386 386 HOH HOH B . J 7 HOH 64 387 387 HOH HOH B . J 7 HOH 65 388 388 HOH HOH B . J 7 HOH 66 389 389 HOH HOH B . J 7 HOH 67 390 390 HOH HOH B . J 7 HOH 68 391 391 HOH HOH B . J 7 HOH 69 392 392 HOH HOH B . J 7 HOH 70 393 393 HOH HOH B . J 7 HOH 71 394 394 HOH HOH B . J 7 HOH 72 395 395 HOH HOH B . J 7 HOH 73 396 396 HOH HOH B . J 7 HOH 74 397 397 HOH HOH B . J 7 HOH 75 398 398 HOH HOH B . J 7 HOH 76 399 399 HOH HOH B . J 7 HOH 77 400 400 HOH HOH B . J 7 HOH 78 401 401 HOH HOH B . J 7 HOH 79 402 402 HOH HOH B . J 7 HOH 80 403 403 HOH HOH B . J 7 HOH 81 404 404 HOH HOH B . J 7 HOH 82 405 405 HOH HOH B . J 7 HOH 83 406 406 HOH HOH B . J 7 HOH 84 407 407 HOH HOH B . J 7 HOH 85 408 408 HOH HOH B . J 7 HOH 86 410 410 HOH HOH B . J 7 HOH 87 411 411 HOH HOH B . J 7 HOH 88 412 412 HOH HOH B . J 7 HOH 89 413 413 HOH HOH B . J 7 HOH 90 414 414 HOH HOH B . J 7 HOH 91 415 415 HOH HOH B . J 7 HOH 92 416 416 HOH HOH B . J 7 HOH 93 417 417 HOH HOH B . J 7 HOH 94 418 418 HOH HOH B . J 7 HOH 95 419 419 HOH HOH B . J 7 HOH 96 420 420 HOH HOH B . J 7 HOH 97 421 421 HOH HOH B . J 7 HOH 98 422 422 HOH HOH B . J 7 HOH 99 423 423 HOH HOH B . J 7 HOH 100 424 424 HOH HOH B . J 7 HOH 101 425 425 HOH HOH B . J 7 HOH 102 426 426 HOH HOH B . J 7 HOH 103 427 427 HOH HOH B . J 7 HOH 104 428 428 HOH HOH B . J 7 HOH 105 429 429 HOH HOH B . J 7 HOH 106 430 430 HOH HOH B . J 7 HOH 107 431 431 HOH HOH B . J 7 HOH 108 432 432 HOH HOH B . J 7 HOH 109 433 433 HOH HOH B . J 7 HOH 110 434 434 HOH HOH B . J 7 HOH 111 435 435 HOH HOH B . J 7 HOH 112 436 436 HOH HOH B . J 7 HOH 113 437 437 HOH HOH B . J 7 HOH 114 438 438 HOH HOH B . J 7 HOH 115 440 440 HOH HOH B . J 7 HOH 116 444 444 HOH HOH B . J 7 HOH 117 445 445 HOH HOH B . J 7 HOH 118 446 446 HOH HOH B . J 7 HOH 119 447 447 HOH HOH B . J 7 HOH 120 450 450 HOH HOH B . J 7 HOH 121 453 453 HOH HOH B . J 7 HOH 122 454 454 HOH HOH B . J 7 HOH 123 464 464 HOH HOH B . J 7 HOH 124 466 466 HOH HOH B . J 7 HOH 125 469 469 HOH HOH B . J 7 HOH 126 470 470 HOH HOH B . J 7 HOH 127 471 471 HOH HOH B . J 7 HOH 128 472 472 HOH HOH B . J 7 HOH 129 473 473 HOH HOH B . J 7 HOH 130 474 474 HOH HOH B . J 7 HOH 131 475 475 HOH HOH B . J 7 HOH 132 476 476 HOH HOH B . J 7 HOH 133 477 477 HOH HOH B . J 7 HOH 134 478 478 HOH HOH B . J 7 HOH 135 479 479 HOH HOH B . J 7 HOH 136 480 480 HOH HOH B . J 7 HOH 137 481 481 HOH HOH B . J 7 HOH 138 482 482 HOH HOH B . J 7 HOH 139 483 483 HOH HOH B . J 7 HOH 140 484 484 HOH HOH B . J 7 HOH 141 486 486 HOH HOH B . J 7 HOH 142 487 487 HOH HOH B . J 7 HOH 143 488 488 HOH HOH B . J 7 HOH 144 490 490 HOH HOH B . J 7 HOH 145 491 491 HOH HOH B . J 7 HOH 146 492 492 HOH HOH B . J 7 HOH 147 493 493 HOH HOH B . J 7 HOH 148 494 494 HOH HOH B . J 7 HOH 149 495 495 HOH HOH B . J 7 HOH 150 496 496 HOH HOH B . J 7 HOH 151 497 497 HOH HOH B . J 7 HOH 152 498 498 HOH HOH B . J 7 HOH 153 499 499 HOH HOH B . J 7 HOH 154 500 500 HOH HOH B . J 7 HOH 155 501 501 HOH HOH B . J 7 HOH 156 502 502 HOH HOH B . J 7 HOH 157 503 503 HOH HOH B . J 7 HOH 158 504 504 HOH HOH B . J 7 HOH 159 505 505 HOH HOH B . J 7 HOH 160 506 506 HOH HOH B . J 7 HOH 161 507 507 HOH HOH B . J 7 HOH 162 508 508 HOH HOH B . J 7 HOH 163 509 509 HOH HOH B . J 7 HOH 164 510 510 HOH HOH B . J 7 HOH 165 511 511 HOH HOH B . J 7 HOH 166 512 512 HOH HOH B . J 7 HOH 167 513 513 HOH HOH B . J 7 HOH 168 514 514 HOH HOH B . J 7 HOH 169 515 515 HOH HOH B . J 7 HOH 170 517 517 HOH HOH B . J 7 HOH 171 519 519 HOH HOH B . J 7 HOH 172 521 521 HOH HOH B . J 7 HOH 173 525 525 HOH HOH B . J 7 HOH 174 526 526 HOH HOH B . J 7 HOH 175 527 527 HOH HOH B . J 7 HOH 176 529 529 HOH HOH B . J 7 HOH 177 530 530 HOH HOH B . J 7 HOH 178 531 531 HOH HOH B . J 7 HOH 179 532 532 HOH HOH B . J 7 HOH 180 533 533 HOH HOH B . J 7 HOH 181 534 534 HOH HOH B . J 7 HOH 182 535 535 HOH HOH B . J 7 HOH 183 536 536 HOH HOH B . J 7 HOH 184 541 541 HOH HOH B . J 7 HOH 185 544 544 HOH HOH B . J 7 HOH 186 545 545 HOH HOH B . J 7 HOH 187 546 546 HOH HOH B . J 7 HOH 188 548 548 HOH HOH B . J 7 HOH 189 549 549 HOH HOH B . J 7 HOH 190 550 550 HOH HOH B . J 7 HOH 191 553 553 HOH HOH B . J 7 HOH 192 554 554 HOH HOH B . J 7 HOH 193 555 555 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 1Z8J _cell.length_a 49.710 _cell.length_b 73.550 _cell.length_c 90.100 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1Z8J _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1Z8J _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_percent_sol 47.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_details '20% PEG 8000, 0.1 M sodium cacodylate, 0.2 M zinc acetate, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 148 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-08-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.entry_id 1Z8J _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.0 _reflns.number_obs 22987 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 18.2 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.1 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1Z8J _refine.ls_number_reflns_obs 22486 _refine.ls_number_reflns_all 22981 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 618450.61 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 97.9 _refine.ls_R_factor_obs 0.205 _refine.ls_R_factor_all 0.205 _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free 0.246 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.0 _refine.ls_number_reflns_R_free 1116 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 36.9 _refine.aniso_B[1][1] 0.28 _refine.aniso_B[2][2] -12.30 _refine.aniso_B[3][3] 12.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.383062 _refine.solvent_model_param_bsol 54.5268 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1SHH' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1Z8J _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.19 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2295 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 2592 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.5 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.22 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work 3440 _refine_ls_shell.R_factor_R_work 0.251 _refine_ls_shell.percent_reflns_obs 96.6 _refine_ls_shell.R_factor_R_free 0.286 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 183 _refine_ls_shell.number_reflns_obs 2453 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP-DAMINO.PARAM PROTEIN-DAMINO.TOP 'X-RAY DIFFRACTION' 2 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 CH2.PARAM NAG.TOP 'X-RAY DIFFRACTION' 5 NAG.PARAM CH2.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1Z8J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1Z8J _struct.title 'Crystal structure of the thrombin mutant G193P bound to PPACK' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Z8J _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'serine protease, oxyanion hole, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 3 ? G N N 3 ? H N N 6 ? I N N 7 ? J N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYID 322 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1Z8J A 1 N 40 L P00734 322 ? 361 ? 1 14 2 2 1Z8J B 1 ? 259 ? P00734 364 ? 622 ? 16 247 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 1Z8J _struct_ref_seq_dif.mon_id PRO _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 203 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00734 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 566 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 193 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4860 ? 1 MORE -99 ? 1 'SSA (A^2)' 12810 ? 2 'ABSA (A^2)' 2210 ? 2 MORE -73 ? 2 'SSA (A^2)' 15460 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J 2 2 A,C,I 2 1 B,D,E,F,G,H,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_565 x+1/2,-y+3/2,-z 1.0000000000 0.0000000000 0.0000000000 24.8550000000 0.0000000000 -1.0000000000 0.0000000000 110.3250000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 4 K GLY A 9 F ASN A 1 GLY A 1 1 ? 6 HELX_P HELX_P2 2 PHE A 21 ? SER A 25 ? PHE A 7 SER A 11 5 ? 5 HELX_P HELX_P3 3 THR A 30 B ILE A 39 K THR A 14 ILE A 14 1 ? 10 HELX_P HELX_P4 4 ALA B 41 ? CYS B 44 ? ALA B 55 CYS B 58 5 ? 4 HELX_P HELX_P5 5 PRO B 48 B ASP B 51 E PRO B 60 ASP B 60 5 ? 4 HELX_P HELX_P6 6 THR B 55 I ASN B 57 ? THR B 60 ASN B 62 5 ? 3 HELX_P HELX_P7 7 ASP B 122 ? ALA B 127 A ASP B 125 ALA B 129 1 ? 6 HELX_P HELX_P8 8 GLU B 169 ? SER B 176 ? GLU B 164 SER B 171 1 ? 8 HELX_P HELX_P9 9 LEU B 246 ? PHE B 257 ? LEU B 234 PHE B 245 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 15 SG ? ? ? 1_555 B CYS 119 SG ? ? A CYS 1 B CYS 122 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? B CYS 42 B CYS 58 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? B CYS 168 B CYS 182 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? B CYS 191 B CYS 220 1_555 ? ? ? ? ? ? ? 2.034 ? ? covale1 covale one ? B HIS 43 NE2 ? ? ? 1_555 D 0G6 . C3 ? ? B HIS 57 B 0G6 301 1_555 ? ? ? ? ? ? ? 1.521 ? ? covale2 covale one ? B ASN 53 ND2 ? G ? 1_555 E NAG . C1 ? ? B ASN 60 B NAG 600 1_555 ? ? ? ? ? ? ? 1.695 ? N-Glycosylation covale3 covale none ? B SER 205 OG ? ? ? 1_555 D 0G6 . C2 ? ? B SER 195 B 0G6 301 1_555 ? ? ? ? ? ? ? 1.673 ? ? metalc1 metalc ? ? A ASP 14 OD2 ? A ? 1_555 C ZN . ZN ? ? A ASP 1 A ZN 15 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc2 metalc ? ? A GLU 33 OE1 ? E ? 3_645 F ZN . ZN ? ? A GLU 14 B ZN 1 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc3 metalc ? ? A GLU 33 OE2 ? E ? 3_645 F ZN . ZN ? ? A GLU 14 B ZN 1 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc4 metalc ? ? C ZN . ZN ? ? ? 1_555 I HOH . O ? ? A ZN 15 A HOH 349 1_555 ? ? ? ? ? ? ? 2.152 ? ? metalc5 metalc ? ? C ZN . ZN ? ? ? 1_555 B HIS 116 NE2 ? ? A ZN 15 B HIS 119 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc6 metalc ? ? C ZN . ZN ? ? ? 1_555 B GLU 124 OE1 ? ? A ZN 15 B GLU 127 4_465 ? ? ? ? ? ? ? 2.089 ? ? metalc7 metalc ? ? F ZN . ZN ? ? ? 1_555 J HOH . O ? ? B ZN 1 B HOH 360 3_645 ? ? ? ? ? ? ? 2.268 ? ? metalc8 metalc ? ? F ZN . ZN ? ? ? 1_555 J HOH . O ? ? B ZN 1 B HOH 444 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc9 metalc ? ? F ZN . ZN ? ? ? 1_555 J HOH . O ? ? B ZN 1 B HOH 445 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc10 metalc ? ? G ZN . ZN ? ? ? 1_555 B GLU 94 OE2 ? A B ZN 4 B GLU 97 3_655 ? ? ? ? ? ? ? 1.980 ? ? metalc11 metalc ? ? G ZN . ZN ? ? ? 1_555 J HOH . O ? ? B ZN 4 B HOH 320 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc12 metalc ? ? G ZN . ZN ? ? ? 1_555 J HOH . O ? ? B ZN 4 B HOH 379 1_555 ? ? ? ? ? ? ? 2.247 ? ? metalc13 metalc ? ? B ARG 233 O ? ? ? 1_555 H NA . NA ? ? B ARG 221 B NA 601 1_555 ? ? ? ? ? ? ? 2.434 ? ? metalc14 metalc ? ? B LYS 236 O ? ? ? 1_555 H NA . NA ? ? B LYS 224 B NA 601 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc15 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? B HOH 313 B NA 601 1_555 ? ? ? ? ? ? ? 2.321 ? ? metalc16 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? B HOH 328 B NA 601 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc17 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? B HOH 330 B NA 601 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc18 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? B HOH 333 B NA 601 1_555 ? ? ? ? ? ? ? 2.604 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 14 ? A ASP 1 A 1_555 ZN ? C ZN . ? A ZN 15 ? 1_555 O ? I HOH . ? A HOH 349 ? 1_555 107.3 ? 2 OD2 ? A ASP 14 ? A ASP 1 A 1_555 ZN ? C ZN . ? A ZN 15 ? 1_555 NE2 ? B HIS 116 ? B HIS 119 ? 1_555 108.2 ? 3 O ? I HOH . ? A HOH 349 ? 1_555 ZN ? C ZN . ? A ZN 15 ? 1_555 NE2 ? B HIS 116 ? B HIS 119 ? 1_555 130.5 ? 4 OD2 ? A ASP 14 ? A ASP 1 A 1_555 ZN ? C ZN . ? A ZN 15 ? 1_555 OE1 ? B GLU 124 ? B GLU 127 ? 4_465 89.4 ? 5 O ? I HOH . ? A HOH 349 ? 1_555 ZN ? C ZN . ? A ZN 15 ? 1_555 OE1 ? B GLU 124 ? B GLU 127 ? 4_465 107.9 ? 6 NE2 ? B HIS 116 ? B HIS 119 ? 1_555 ZN ? C ZN . ? A ZN 15 ? 1_555 OE1 ? B GLU 124 ? B GLU 127 ? 4_465 105.9 ? 7 OE1 ? A GLU 33 ? A GLU 14 E 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 OE2 ? A GLU 33 ? A GLU 14 E 3_645 53.4 ? 8 OE1 ? A GLU 33 ? A GLU 14 E 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 360 ? 3_645 99.3 ? 9 OE2 ? A GLU 33 ? A GLU 14 E 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 360 ? 3_645 144.5 ? 10 OE1 ? A GLU 33 ? A GLU 14 E 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 444 ? 1_555 112.6 ? 11 OE2 ? A GLU 33 ? A GLU 14 E 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 444 ? 1_555 88.1 ? 12 O ? J HOH . ? B HOH 360 ? 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 444 ? 1_555 126.2 ? 13 OE1 ? A GLU 33 ? A GLU 14 E 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 445 ? 1_555 114.5 ? 14 OE2 ? A GLU 33 ? A GLU 14 E 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 445 ? 1_555 77.6 ? 15 O ? J HOH . ? B HOH 360 ? 3_645 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 445 ? 1_555 98.9 ? 16 O ? J HOH . ? B HOH 444 ? 1_555 ZN ? F ZN . ? B ZN 1 ? 1_555 O ? J HOH . ? B HOH 445 ? 1_555 105.0 ? 17 OE2 ? B GLU 94 ? B GLU 97 A 3_655 ZN ? G ZN . ? B ZN 4 ? 1_555 O ? J HOH . ? B HOH 320 ? 1_555 120.9 ? 18 OE2 ? B GLU 94 ? B GLU 97 A 3_655 ZN ? G ZN . ? B ZN 4 ? 1_555 O ? J HOH . ? B HOH 379 ? 1_555 81.7 ? 19 O ? J HOH . ? B HOH 320 ? 1_555 ZN ? G ZN . ? B ZN 4 ? 1_555 O ? J HOH . ? B HOH 379 ? 1_555 84.2 ? 20 O ? B ARG 233 ? B ARG 221 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? B LYS 236 ? B LYS 224 ? 1_555 93.0 ? 21 O ? B ARG 233 ? B ARG 221 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 313 ? 1_555 164.5 ? 22 O ? B LYS 236 ? B LYS 224 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 313 ? 1_555 73.4 ? 23 O ? B ARG 233 ? B ARG 221 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 328 ? 1_555 93.7 ? 24 O ? B LYS 236 ? B LYS 224 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 328 ? 1_555 88.1 ? 25 O ? J HOH . ? B HOH 313 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 328 ? 1_555 93.3 ? 26 O ? B ARG 233 ? B ARG 221 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 330 ? 1_555 88.0 ? 27 O ? B LYS 236 ? B LYS 224 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 330 ? 1_555 95.2 ? 28 O ? J HOH . ? B HOH 313 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 330 ? 1_555 85.9 ? 29 O ? J HOH . ? B HOH 328 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 330 ? 1_555 176.2 ? 30 O ? B ARG 233 ? B ARG 221 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 333 ? 1_555 99.1 ? 31 O ? B LYS 236 ? B LYS 224 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 333 ? 1_555 167.9 ? 32 O ? J HOH . ? B HOH 313 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 333 ? 1_555 94.4 ? 33 O ? J HOH . ? B HOH 328 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 333 ? 1_555 92.7 ? 34 O ? J HOH . ? B HOH 330 ? 1_555 NA ? H NA . ? B NA 601 ? 1_555 O ? J HOH . ? B HOH 333 ? 1_555 83.7 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 22 B . A SER 36 B PRO 23 B ? PRO 37 B 1 -0.16 2 GLU 202 B . ? GLU 192 B PRO 203 B ? PRO 193 B 1 0.49 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER B 20 ASP B 21 A 2 GLN B 161 ? VAL B 168 ? GLN B 156 VAL B 163 A 3 MET B 185 ? ALA B 188 ? MET B 180 ALA B 183 A 4 GLY B 238 ? HIS B 242 ? GLY B 226 HIS B 230 A 5 TRP B 219 ? TRP B 227 ? TRP B 207 TRP B 215 A 6 PRO B 208 ? LYS B 212 ? PRO B 198 LYS B 202 A 7 LYS B 135 ? GLY B 140 ? LYS B 135 GLY B 140 A 8 GLN B 161 ? VAL B 168 ? GLN B 156 VAL B 163 B 1 GLN B 15 ? ARG B 20 ? GLN B 30 ARG B 35 B 2 GLU B 25 ? LEU B 32 ? GLU B 39 LEU B 46 B 3 TRP B 37 ? THR B 40 ? TRP B 51 THR B 54 B 4 ALA B 101 ? LEU B 105 ? ALA B 104 LEU B 108 B 5 LYS B 77 ? ILE B 86 ? LYS B 81 ILE B 90 B 6 LEU B 59 ? ILE B 63 ? LEU B 64 ILE B 68 B 7 GLN B 15 ? ARG B 20 ? GLN B 30 ARG B 35 C 1 LEU B 46 ? TYR B 47 A LEU B 60 TYR B 60 C 2 LYS B 52 F ASN B 53 G LYS B 60 ASN B 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER B 20 O VAL B 162 ? O VAL B 157 A 2 3 N VAL B 168 ? N VAL B 163 O CYS B 187 ? O CYS B 182 A 3 4 N PHE B 186 ? N PHE B 181 O TYR B 240 ? O TYR B 228 A 4 5 O PHE B 239 ? O PHE B 227 N TRP B 227 ? N TRP B 215 A 5 6 O TYR B 220 ? O TYR B 208 N MET B 211 ? N MET B 201 A 6 7 O VAL B 210 ? O VAL B 200 N ARG B 137 ? N ARG B 137 A 7 8 N GLY B 136 ? N GLY B 136 O LEU B 165 ? O LEU B 160 B 1 2 N ARG B 20 ? N ARG B 35 O GLU B 25 ? O GLU B 39 B 2 3 N SER B 31 ? N SER B 45 O LEU B 39 ? O LEU B 53 B 3 4 N THR B 40 ? N THR B 54 O ALA B 101 ? O ALA B 104 B 4 5 O LYS B 104 ? O LYS B 107 N GLU B 82 ? N GLU B 86 B 5 6 O LYS B 77 ? O LYS B 81 N ILE B 63 ? N ILE B 68 B 6 7 O LEU B 60 ? O LEU B 65 N PHE B 19 ? N PHE B 34 C 1 2 N TYR B 47 A N TYR B 60 O LYS B 52 F O LYS B 60 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 451 ? ? O A HOH 452 ? ? 1.08 2 1 O B HOH 435 ? ? O B HOH 436 ? ? 1.96 3 1 NE B ARG 165 ? ? O B HOH 484 ? ? 2.11 4 1 O B HOH 346 ? ? O B HOH 386 ? ? 2.14 5 1 NZ B LYS 70 ? ? O B HOH 501 ? ? 2.15 6 1 O6 B NAG 600 ? ? O B HOH 519 ? ? 2.16 7 1 O A HOH 349 ? ? O A HOH 465 ? ? 2.18 8 1 O B HOH 432 ? ? O B HOH 435 ? ? 2.18 9 1 NH2 B ARG 35 ? ? O B HOH 403 ? ? 2.19 10 1 OE2 B GLU 39 ? ? O B HOH 385 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 537 ? ? 1_555 O A HOH 547 ? ? 4_465 0.48 2 1 O A HOH 528 ? ? 1_555 O A HOH 538 ? ? 4_565 0.56 3 1 O A HOH 552 ? ? 1_555 O B HOH 533 ? ? 1_655 0.59 4 1 O B HOH 515 ? ? 1_555 O B HOH 517 ? ? 1_655 1.54 5 1 O A HOH 518 ? ? 1_555 O B HOH 533 ? ? 1_655 1.99 6 1 N A THR 1 N ? 1_555 O A HOH 547 ? ? 4_465 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASN _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 K _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 J _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 J _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.00 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.70 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 7 ? ? -131.71 -88.07 2 1 ILE A 14 K ? -67.07 86.93 3 1 TYR B 60 A ? -160.45 80.92 4 1 ASN B 60 G ? -159.89 65.70 5 1 ASN B 78 ? ? -166.02 -47.80 6 1 GLU B 97 A ? -108.53 -84.90 7 1 PRO B 193 ? ? -102.89 54.85 8 1 GLN B 244 ? ? -74.27 -76.26 # _pdbx_molecule_features.prd_id PRD_000020 _pdbx_molecule_features.name D-Phe-Pro-Arg-CH2Cl _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000020 _pdbx_molecule.asym_id D # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 53 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 60 _pdbx_struct_mod_residue.PDB_ins_code G _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_entry_details.entry_id 1Z8J _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE INHIBITOR IS COVALENTLY CONNECTED TO ACTIVE_SITE RESIDUES: 1) VIA A HEMIKETAL GROUP TO OG SER B 195, 2) VIA A METHYLENE GROUP TO NE2 HIS B 57. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B SER 71 A B SER 67 2 1 Y 1 B ARG 71 B B ARG 68 3 1 Y 1 B THR 71 C B THR 69 4 1 Y 1 B ARG 71 D B ARG 70 5 1 Y 1 B TYR 71 E B TYR 71 6 1 Y 1 B GLU 71 F B GLU 72 7 1 Y 1 B TRP 147 A B TRP 148 8 1 Y 1 B THR 147 B B THR 149 9 1 Y 1 B ALA 147 C B ALA 150 10 1 Y 1 B ASN 147 D B ASN 151 11 1 Y 1 B VAL 147 E B VAL 152 12 1 Y 1 B GLY 147 F B GLY 153 13 1 Y 1 B LYS 147 G B LYS 154 14 1 Y 1 B GLY 147 H B GLY 155 15 1 Y 1 B GLY 246 ? B GLY 258 16 1 Y 1 B GLU 247 ? B GLU 259 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0G6 N N N N 1 0G6 CA C N R 2 0G6 C C N N 3 0G6 O O N N 4 0G6 CB C N N 5 0G6 CG C Y N 6 0G6 CD1 C Y N 7 0G6 CD2 C Y N 8 0G6 CE1 C Y N 9 0G6 CE2 C Y N 10 0G6 CZ C Y N 11 0G6 N1 N N N 12 0G6 CA1 C N S 13 0G6 C1 C N N 14 0G6 O1 O N N 15 0G6 CB1 C N N 16 0G6 CG1 C N N 17 0G6 CD C N N 18 0G6 N2 N N N 19 0G6 CA2 C N S 20 0G6 C2 C N S 21 0G6 O2 O N N 22 0G6 CB2 C N N 23 0G6 CG2 C N N 24 0G6 CD3 C N N 25 0G6 NE N N N 26 0G6 CZ1 C N N 27 0G6 NH1 N N N 28 0G6 NH2 N N N 29 0G6 C3 C N N 30 0G6 CL CL N N 31 0G6 H H N N 32 0G6 H2 H N N 33 0G6 HA H N N 34 0G6 HB2 H N N 35 0G6 HB3 H N N 36 0G6 HD1 H N N 37 0G6 HD2 H N N 38 0G6 HE1 H N N 39 0G6 HE2 H N N 40 0G6 HZ H N N 41 0G6 HA1 H N N 42 0G6 HB21 H N N 43 0G6 HB31 H N N 44 0G6 HG2 H N N 45 0G6 HG3 H N N 46 0G6 HD21 H N N 47 0G6 HD3 H N N 48 0G6 H1 H N N 49 0G6 HA2 H N N 50 0G6 HB22 H N N 51 0G6 HB32 H N N 52 0G6 HG21 H N N 53 0G6 HG31 H N N 54 0G6 HD22 H N N 55 0G6 HD31 H N N 56 0G6 HE H N N 57 0G6 HH11 H N N 58 0G6 HH12 H N N 59 0G6 HH21 H N N 60 0G6 HH22 H N N 61 0G6 H11 H N N 62 0G6 H21 H N N 63 0G6 H33 H N N 64 0G6 H34 H N N 65 ALA N N N N 66 ALA CA C N S 67 ALA C C N N 68 ALA O O N N 69 ALA CB C N N 70 ALA OXT O N N 71 ALA H H N N 72 ALA H2 H N N 73 ALA HA H N N 74 ALA HB1 H N N 75 ALA HB2 H N N 76 ALA HB3 H N N 77 ALA HXT H N N 78 ARG N N N N 79 ARG CA C N S 80 ARG C C N N 81 ARG O O N N 82 ARG CB C N N 83 ARG CG C N N 84 ARG CD C N N 85 ARG NE N N N 86 ARG CZ C N N 87 ARG NH1 N N N 88 ARG NH2 N N N 89 ARG OXT O N N 90 ARG H H N N 91 ARG H2 H N N 92 ARG HA H N N 93 ARG HB2 H N N 94 ARG HB3 H N N 95 ARG HG2 H N N 96 ARG HG3 H N N 97 ARG HD2 H N N 98 ARG HD3 H N N 99 ARG HE H N N 100 ARG HH11 H N N 101 ARG HH12 H N N 102 ARG HH21 H N N 103 ARG HH22 H N N 104 ARG HXT H N N 105 ASN N N N N 106 ASN CA C N S 107 ASN C C N N 108 ASN O O N N 109 ASN CB C N N 110 ASN CG C N N 111 ASN OD1 O N N 112 ASN ND2 N N N 113 ASN OXT O N N 114 ASN H H N N 115 ASN H2 H N N 116 ASN HA H N N 117 ASN HB2 H N N 118 ASN HB3 H N N 119 ASN HD21 H N N 120 ASN HD22 H N N 121 ASN HXT H N N 122 ASP N N N N 123 ASP CA C N S 124 ASP C C N N 125 ASP O O N N 126 ASP CB C N N 127 ASP CG C N N 128 ASP OD1 O N N 129 ASP OD2 O N N 130 ASP OXT O N N 131 ASP H H N N 132 ASP H2 H N N 133 ASP HA H N N 134 ASP HB2 H N N 135 ASP HB3 H N N 136 ASP HD2 H N N 137 ASP HXT H N N 138 CYS N N N N 139 CYS CA C N R 140 CYS C C N N 141 CYS O O N N 142 CYS CB C N N 143 CYS SG S N N 144 CYS OXT O N N 145 CYS H H N N 146 CYS H2 H N N 147 CYS HA H N N 148 CYS HB2 H N N 149 CYS HB3 H N N 150 CYS HG H N N 151 CYS HXT H N N 152 GLN N N N N 153 GLN CA C N S 154 GLN C C N N 155 GLN O O N N 156 GLN CB C N N 157 GLN CG C N N 158 GLN CD C N N 159 GLN OE1 O N N 160 GLN NE2 N N N 161 GLN OXT O N N 162 GLN H H N N 163 GLN H2 H N N 164 GLN HA H N N 165 GLN HB2 H N N 166 GLN HB3 H N N 167 GLN HG2 H N N 168 GLN HG3 H N N 169 GLN HE21 H N N 170 GLN HE22 H N N 171 GLN HXT H N N 172 GLU N N N N 173 GLU CA C N S 174 GLU C C N N 175 GLU O O N N 176 GLU CB C N N 177 GLU CG C N N 178 GLU CD C N N 179 GLU OE1 O N N 180 GLU OE2 O N N 181 GLU OXT O N N 182 GLU H H N N 183 GLU H2 H N N 184 GLU HA H N N 185 GLU HB2 H N N 186 GLU HB3 H N N 187 GLU HG2 H N N 188 GLU HG3 H N N 189 GLU HE2 H N N 190 GLU HXT H N N 191 GLY N N N N 192 GLY CA C N N 193 GLY C C N N 194 GLY O O N N 195 GLY OXT O N N 196 GLY H H N N 197 GLY H2 H N N 198 GLY HA2 H N N 199 GLY HA3 H N N 200 GLY HXT H N N 201 HIS N N N N 202 HIS CA C N S 203 HIS C C N N 204 HIS O O N N 205 HIS CB C N N 206 HIS CG C Y N 207 HIS ND1 N Y N 208 HIS CD2 C Y N 209 HIS CE1 C Y N 210 HIS NE2 N Y N 211 HIS OXT O N N 212 HIS H H N N 213 HIS H2 H N N 214 HIS HA H N N 215 HIS HB2 H N N 216 HIS HB3 H N N 217 HIS HD1 H N N 218 HIS HD2 H N N 219 HIS HE1 H N N 220 HIS HE2 H N N 221 HIS HXT H N N 222 HOH O O N N 223 HOH H1 H N N 224 HOH H2 H N N 225 ILE N N N N 226 ILE CA C N S 227 ILE C C N N 228 ILE O O N N 229 ILE CB C N S 230 ILE CG1 C N N 231 ILE CG2 C N N 232 ILE CD1 C N N 233 ILE OXT O N N 234 ILE H H N N 235 ILE H2 H N N 236 ILE HA H N N 237 ILE HB H N N 238 ILE HG12 H N N 239 ILE HG13 H N N 240 ILE HG21 H N N 241 ILE HG22 H N N 242 ILE HG23 H N N 243 ILE HD11 H N N 244 ILE HD12 H N N 245 ILE HD13 H N N 246 ILE HXT H N N 247 LEU N N N N 248 LEU CA C N S 249 LEU C C N N 250 LEU O O N N 251 LEU CB C N N 252 LEU CG C N N 253 LEU CD1 C N N 254 LEU CD2 C N N 255 LEU OXT O N N 256 LEU H H N N 257 LEU H2 H N N 258 LEU HA H N N 259 LEU HB2 H N N 260 LEU HB3 H N N 261 LEU HG H N N 262 LEU HD11 H N N 263 LEU HD12 H N N 264 LEU HD13 H N N 265 LEU HD21 H N N 266 LEU HD22 H N N 267 LEU HD23 H N N 268 LEU HXT H N N 269 LYS N N N N 270 LYS CA C N S 271 LYS C C N N 272 LYS O O N N 273 LYS CB C N N 274 LYS CG C N N 275 LYS CD C N N 276 LYS CE C N N 277 LYS NZ N N N 278 LYS OXT O N N 279 LYS H H N N 280 LYS H2 H N N 281 LYS HA H N N 282 LYS HB2 H N N 283 LYS HB3 H N N 284 LYS HG2 H N N 285 LYS HG3 H N N 286 LYS HD2 H N N 287 LYS HD3 H N N 288 LYS HE2 H N N 289 LYS HE3 H N N 290 LYS HZ1 H N N 291 LYS HZ2 H N N 292 LYS HZ3 H N N 293 LYS HXT H N N 294 MET N N N N 295 MET CA C N S 296 MET C C N N 297 MET O O N N 298 MET CB C N N 299 MET CG C N N 300 MET SD S N N 301 MET CE C N N 302 MET OXT O N N 303 MET H H N N 304 MET H2 H N N 305 MET HA H N N 306 MET HB2 H N N 307 MET HB3 H N N 308 MET HG2 H N N 309 MET HG3 H N N 310 MET HE1 H N N 311 MET HE2 H N N 312 MET HE3 H N N 313 MET HXT H N N 314 NA NA NA N N 315 NAG C1 C N R 316 NAG C2 C N R 317 NAG C3 C N R 318 NAG C4 C N S 319 NAG C5 C N R 320 NAG C6 C N N 321 NAG C7 C N N 322 NAG C8 C N N 323 NAG N2 N N N 324 NAG O1 O N N 325 NAG O3 O N N 326 NAG O4 O N N 327 NAG O5 O N N 328 NAG O6 O N N 329 NAG O7 O N N 330 NAG H1 H N N 331 NAG H2 H N N 332 NAG H3 H N N 333 NAG H4 H N N 334 NAG H5 H N N 335 NAG H61 H N N 336 NAG H62 H N N 337 NAG H81 H N N 338 NAG H82 H N N 339 NAG H83 H N N 340 NAG HN2 H N N 341 NAG HO1 H N N 342 NAG HO3 H N N 343 NAG HO4 H N N 344 NAG HO6 H N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PRO N N N N 369 PRO CA C N S 370 PRO C C N N 371 PRO O O N N 372 PRO CB C N N 373 PRO CG C N N 374 PRO CD C N N 375 PRO OXT O N N 376 PRO H H N N 377 PRO HA H N N 378 PRO HB2 H N N 379 PRO HB3 H N N 380 PRO HG2 H N N 381 PRO HG3 H N N 382 PRO HD2 H N N 383 PRO HD3 H N N 384 PRO HXT H N N 385 SER N N N N 386 SER CA C N S 387 SER C C N N 388 SER O O N N 389 SER CB C N N 390 SER OG O N N 391 SER OXT O N N 392 SER H H N N 393 SER H2 H N N 394 SER HA H N N 395 SER HB2 H N N 396 SER HB3 H N N 397 SER HG H N N 398 SER HXT H N N 399 THR N N N N 400 THR CA C N S 401 THR C C N N 402 THR O O N N 403 THR CB C N R 404 THR OG1 O N N 405 THR CG2 C N N 406 THR OXT O N N 407 THR H H N N 408 THR H2 H N N 409 THR HA H N N 410 THR HB H N N 411 THR HG1 H N N 412 THR HG21 H N N 413 THR HG22 H N N 414 THR HG23 H N N 415 THR HXT H N N 416 TRP N N N N 417 TRP CA C N S 418 TRP C C N N 419 TRP O O N N 420 TRP CB C N N 421 TRP CG C Y N 422 TRP CD1 C Y N 423 TRP CD2 C Y N 424 TRP NE1 N Y N 425 TRP CE2 C Y N 426 TRP CE3 C Y N 427 TRP CZ2 C Y N 428 TRP CZ3 C Y N 429 TRP CH2 C Y N 430 TRP OXT O N N 431 TRP H H N N 432 TRP H2 H N N 433 TRP HA H N N 434 TRP HB2 H N N 435 TRP HB3 H N N 436 TRP HD1 H N N 437 TRP HE1 H N N 438 TRP HE3 H N N 439 TRP HZ2 H N N 440 TRP HZ3 H N N 441 TRP HH2 H N N 442 TRP HXT H N N 443 TYR N N N N 444 TYR CA C N S 445 TYR C C N N 446 TYR O O N N 447 TYR CB C N N 448 TYR CG C Y N 449 TYR CD1 C Y N 450 TYR CD2 C Y N 451 TYR CE1 C Y N 452 TYR CE2 C Y N 453 TYR CZ C Y N 454 TYR OH O N N 455 TYR OXT O N N 456 TYR H H N N 457 TYR H2 H N N 458 TYR HA H N N 459 TYR HB2 H N N 460 TYR HB3 H N N 461 TYR HD1 H N N 462 TYR HD2 H N N 463 TYR HE1 H N N 464 TYR HE2 H N N 465 TYR HH H N N 466 TYR HXT H N N 467 VAL N N N N 468 VAL CA C N S 469 VAL C C N N 470 VAL O O N N 471 VAL CB C N N 472 VAL CG1 C N N 473 VAL CG2 C N N 474 VAL OXT O N N 475 VAL H H N N 476 VAL H2 H N N 477 VAL HA H N N 478 VAL HB H N N 479 VAL HG11 H N N 480 VAL HG12 H N N 481 VAL HG13 H N N 482 VAL HG21 H N N 483 VAL HG22 H N N 484 VAL HG23 H N N 485 VAL HXT H N N 486 ZN ZN ZN N N 487 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0G6 N CA sing N N 1 0G6 N H sing N N 2 0G6 N H2 sing N N 3 0G6 CA C sing N N 4 0G6 CA CB sing N N 5 0G6 CA HA sing N N 6 0G6 C O doub N N 7 0G6 C N1 sing N N 8 0G6 CB CG sing N N 9 0G6 CB HB2 sing N N 10 0G6 CB HB3 sing N N 11 0G6 CG CD1 doub Y N 12 0G6 CG CD2 sing Y N 13 0G6 CD1 CE1 sing Y N 14 0G6 CD1 HD1 sing N N 15 0G6 CD2 CE2 doub Y N 16 0G6 CD2 HD2 sing N N 17 0G6 CE1 CZ doub Y N 18 0G6 CE1 HE1 sing N N 19 0G6 CE2 CZ sing Y N 20 0G6 CE2 HE2 sing N N 21 0G6 CZ HZ sing N N 22 0G6 N1 CA1 sing N N 23 0G6 N1 CD sing N N 24 0G6 CA1 C1 sing N N 25 0G6 CA1 CB1 sing N N 26 0G6 CA1 HA1 sing N N 27 0G6 C1 O1 doub N N 28 0G6 C1 N2 sing N N 29 0G6 CB1 CG1 sing N N 30 0G6 CB1 HB21 sing N N 31 0G6 CB1 HB31 sing N N 32 0G6 CG1 CD sing N N 33 0G6 CG1 HG2 sing N N 34 0G6 CG1 HG3 sing N N 35 0G6 CD HD21 sing N N 36 0G6 CD HD3 sing N N 37 0G6 N2 CA2 sing N N 38 0G6 N2 H1 sing N N 39 0G6 CA2 C2 sing N N 40 0G6 CA2 CB2 sing N N 41 0G6 CA2 HA2 sing N N 42 0G6 C2 O2 sing N N 43 0G6 C2 C3 sing N N 44 0G6 CB2 CG2 sing N N 45 0G6 CB2 HB22 sing N N 46 0G6 CB2 HB32 sing N N 47 0G6 CG2 CD3 sing N N 48 0G6 CG2 HG21 sing N N 49 0G6 CG2 HG31 sing N N 50 0G6 CD3 NE sing N N 51 0G6 CD3 HD22 sing N N 52 0G6 CD3 HD31 sing N N 53 0G6 NE CZ1 sing N N 54 0G6 NE HE sing N N 55 0G6 CZ1 NH1 sing N N 56 0G6 CZ1 NH2 doub N N 57 0G6 NH1 HH11 sing N N 58 0G6 NH1 HH12 sing N N 59 0G6 NH2 HH21 sing N N 60 0G6 NH2 HH22 sing N N 61 0G6 C3 H11 sing N N 62 0G6 C3 H21 sing N N 63 0G6 CL C3 sing N N 64 0G6 C2 H33 sing N N 65 0G6 O2 H34 sing N N 66 ALA N CA sing N N 67 ALA N H sing N N 68 ALA N H2 sing N N 69 ALA CA C sing N N 70 ALA CA CB sing N N 71 ALA CA HA sing N N 72 ALA C O doub N N 73 ALA C OXT sing N N 74 ALA CB HB1 sing N N 75 ALA CB HB2 sing N N 76 ALA CB HB3 sing N N 77 ALA OXT HXT sing N N 78 ARG N CA sing N N 79 ARG N H sing N N 80 ARG N H2 sing N N 81 ARG CA C sing N N 82 ARG CA CB sing N N 83 ARG CA HA sing N N 84 ARG C O doub N N 85 ARG C OXT sing N N 86 ARG CB CG sing N N 87 ARG CB HB2 sing N N 88 ARG CB HB3 sing N N 89 ARG CG CD sing N N 90 ARG CG HG2 sing N N 91 ARG CG HG3 sing N N 92 ARG CD NE sing N N 93 ARG CD HD2 sing N N 94 ARG CD HD3 sing N N 95 ARG NE CZ sing N N 96 ARG NE HE sing N N 97 ARG CZ NH1 sing N N 98 ARG CZ NH2 doub N N 99 ARG NH1 HH11 sing N N 100 ARG NH1 HH12 sing N N 101 ARG NH2 HH21 sing N N 102 ARG NH2 HH22 sing N N 103 ARG OXT HXT sing N N 104 ASN N CA sing N N 105 ASN N H sing N N 106 ASN N H2 sing N N 107 ASN CA C sing N N 108 ASN CA CB sing N N 109 ASN CA HA sing N N 110 ASN C O doub N N 111 ASN C OXT sing N N 112 ASN CB CG sing N N 113 ASN CB HB2 sing N N 114 ASN CB HB3 sing N N 115 ASN CG OD1 doub N N 116 ASN CG ND2 sing N N 117 ASN ND2 HD21 sing N N 118 ASN ND2 HD22 sing N N 119 ASN OXT HXT sing N N 120 ASP N CA sing N N 121 ASP N H sing N N 122 ASP N H2 sing N N 123 ASP CA C sing N N 124 ASP CA CB sing N N 125 ASP CA HA sing N N 126 ASP C O doub N N 127 ASP C OXT sing N N 128 ASP CB CG sing N N 129 ASP CB HB2 sing N N 130 ASP CB HB3 sing N N 131 ASP CG OD1 doub N N 132 ASP CG OD2 sing N N 133 ASP OD2 HD2 sing N N 134 ASP OXT HXT sing N N 135 CYS N CA sing N N 136 CYS N H sing N N 137 CYS N H2 sing N N 138 CYS CA C sing N N 139 CYS CA CB sing N N 140 CYS CA HA sing N N 141 CYS C O doub N N 142 CYS C OXT sing N N 143 CYS CB SG sing N N 144 CYS CB HB2 sing N N 145 CYS CB HB3 sing N N 146 CYS SG HG sing N N 147 CYS OXT HXT sing N N 148 GLN N CA sing N N 149 GLN N H sing N N 150 GLN N H2 sing N N 151 GLN CA C sing N N 152 GLN CA CB sing N N 153 GLN CA HA sing N N 154 GLN C O doub N N 155 GLN C OXT sing N N 156 GLN CB CG sing N N 157 GLN CB HB2 sing N N 158 GLN CB HB3 sing N N 159 GLN CG CD sing N N 160 GLN CG HG2 sing N N 161 GLN CG HG3 sing N N 162 GLN CD OE1 doub N N 163 GLN CD NE2 sing N N 164 GLN NE2 HE21 sing N N 165 GLN NE2 HE22 sing N N 166 GLN OXT HXT sing N N 167 GLU N CA sing N N 168 GLU N H sing N N 169 GLU N H2 sing N N 170 GLU CA C sing N N 171 GLU CA CB sing N N 172 GLU CA HA sing N N 173 GLU C O doub N N 174 GLU C OXT sing N N 175 GLU CB CG sing N N 176 GLU CB HB2 sing N N 177 GLU CB HB3 sing N N 178 GLU CG CD sing N N 179 GLU CG HG2 sing N N 180 GLU CG HG3 sing N N 181 GLU CD OE1 doub N N 182 GLU CD OE2 sing N N 183 GLU OE2 HE2 sing N N 184 GLU OXT HXT sing N N 185 GLY N CA sing N N 186 GLY N H sing N N 187 GLY N H2 sing N N 188 GLY CA C sing N N 189 GLY CA HA2 sing N N 190 GLY CA HA3 sing N N 191 GLY C O doub N N 192 GLY C OXT sing N N 193 GLY OXT HXT sing N N 194 HIS N CA sing N N 195 HIS N H sing N N 196 HIS N H2 sing N N 197 HIS CA C sing N N 198 HIS CA CB sing N N 199 HIS CA HA sing N N 200 HIS C O doub N N 201 HIS C OXT sing N N 202 HIS CB CG sing N N 203 HIS CB HB2 sing N N 204 HIS CB HB3 sing N N 205 HIS CG ND1 sing Y N 206 HIS CG CD2 doub Y N 207 HIS ND1 CE1 doub Y N 208 HIS ND1 HD1 sing N N 209 HIS CD2 NE2 sing Y N 210 HIS CD2 HD2 sing N N 211 HIS CE1 NE2 sing Y N 212 HIS CE1 HE1 sing N N 213 HIS NE2 HE2 sing N N 214 HIS OXT HXT sing N N 215 HOH O H1 sing N N 216 HOH O H2 sing N N 217 ILE N CA sing N N 218 ILE N H sing N N 219 ILE N H2 sing N N 220 ILE CA C sing N N 221 ILE CA CB sing N N 222 ILE CA HA sing N N 223 ILE C O doub N N 224 ILE C OXT sing N N 225 ILE CB CG1 sing N N 226 ILE CB CG2 sing N N 227 ILE CB HB sing N N 228 ILE CG1 CD1 sing N N 229 ILE CG1 HG12 sing N N 230 ILE CG1 HG13 sing N N 231 ILE CG2 HG21 sing N N 232 ILE CG2 HG22 sing N N 233 ILE CG2 HG23 sing N N 234 ILE CD1 HD11 sing N N 235 ILE CD1 HD12 sing N N 236 ILE CD1 HD13 sing N N 237 ILE OXT HXT sing N N 238 LEU N CA sing N N 239 LEU N H sing N N 240 LEU N H2 sing N N 241 LEU CA C sing N N 242 LEU CA CB sing N N 243 LEU CA HA sing N N 244 LEU C O doub N N 245 LEU C OXT sing N N 246 LEU CB CG sing N N 247 LEU CB HB2 sing N N 248 LEU CB HB3 sing N N 249 LEU CG CD1 sing N N 250 LEU CG CD2 sing N N 251 LEU CG HG sing N N 252 LEU CD1 HD11 sing N N 253 LEU CD1 HD12 sing N N 254 LEU CD1 HD13 sing N N 255 LEU CD2 HD21 sing N N 256 LEU CD2 HD22 sing N N 257 LEU CD2 HD23 sing N N 258 LEU OXT HXT sing N N 259 LYS N CA sing N N 260 LYS N H sing N N 261 LYS N H2 sing N N 262 LYS CA C sing N N 263 LYS CA CB sing N N 264 LYS CA HA sing N N 265 LYS C O doub N N 266 LYS C OXT sing N N 267 LYS CB CG sing N N 268 LYS CB HB2 sing N N 269 LYS CB HB3 sing N N 270 LYS CG CD sing N N 271 LYS CG HG2 sing N N 272 LYS CG HG3 sing N N 273 LYS CD CE sing N N 274 LYS CD HD2 sing N N 275 LYS CD HD3 sing N N 276 LYS CE NZ sing N N 277 LYS CE HE2 sing N N 278 LYS CE HE3 sing N N 279 LYS NZ HZ1 sing N N 280 LYS NZ HZ2 sing N N 281 LYS NZ HZ3 sing N N 282 LYS OXT HXT sing N N 283 MET N CA sing N N 284 MET N H sing N N 285 MET N H2 sing N N 286 MET CA C sing N N 287 MET CA CB sing N N 288 MET CA HA sing N N 289 MET C O doub N N 290 MET C OXT sing N N 291 MET CB CG sing N N 292 MET CB HB2 sing N N 293 MET CB HB3 sing N N 294 MET CG SD sing N N 295 MET CG HG2 sing N N 296 MET CG HG3 sing N N 297 MET SD CE sing N N 298 MET CE HE1 sing N N 299 MET CE HE2 sing N N 300 MET CE HE3 sing N N 301 MET OXT HXT sing N N 302 NAG C1 C2 sing N N 303 NAG C1 O1 sing N N 304 NAG C1 O5 sing N N 305 NAG C1 H1 sing N N 306 NAG C2 C3 sing N N 307 NAG C2 N2 sing N N 308 NAG C2 H2 sing N N 309 NAG C3 C4 sing N N 310 NAG C3 O3 sing N N 311 NAG C3 H3 sing N N 312 NAG C4 C5 sing N N 313 NAG C4 O4 sing N N 314 NAG C4 H4 sing N N 315 NAG C5 C6 sing N N 316 NAG C5 O5 sing N N 317 NAG C5 H5 sing N N 318 NAG C6 O6 sing N N 319 NAG C6 H61 sing N N 320 NAG C6 H62 sing N N 321 NAG C7 C8 sing N N 322 NAG C7 N2 sing N N 323 NAG C7 O7 doub N N 324 NAG C8 H81 sing N N 325 NAG C8 H82 sing N N 326 NAG C8 H83 sing N N 327 NAG N2 HN2 sing N N 328 NAG O1 HO1 sing N N 329 NAG O3 HO3 sing N N 330 NAG O4 HO4 sing N N 331 NAG O6 HO6 sing N N 332 PHE N CA sing N N 333 PHE N H sing N N 334 PHE N H2 sing N N 335 PHE CA C sing N N 336 PHE CA CB sing N N 337 PHE CA HA sing N N 338 PHE C O doub N N 339 PHE C OXT sing N N 340 PHE CB CG sing N N 341 PHE CB HB2 sing N N 342 PHE CB HB3 sing N N 343 PHE CG CD1 doub Y N 344 PHE CG CD2 sing Y N 345 PHE CD1 CE1 sing Y N 346 PHE CD1 HD1 sing N N 347 PHE CD2 CE2 doub Y N 348 PHE CD2 HD2 sing N N 349 PHE CE1 CZ doub Y N 350 PHE CE1 HE1 sing N N 351 PHE CE2 CZ sing Y N 352 PHE CE2 HE2 sing N N 353 PHE CZ HZ sing N N 354 PHE OXT HXT sing N N 355 PRO N CA sing N N 356 PRO N CD sing N N 357 PRO N H sing N N 358 PRO CA C sing N N 359 PRO CA CB sing N N 360 PRO CA HA sing N N 361 PRO C O doub N N 362 PRO C OXT sing N N 363 PRO CB CG sing N N 364 PRO CB HB2 sing N N 365 PRO CB HB3 sing N N 366 PRO CG CD sing N N 367 PRO CG HG2 sing N N 368 PRO CG HG3 sing N N 369 PRO CD HD2 sing N N 370 PRO CD HD3 sing N N 371 PRO OXT HXT sing N N 372 SER N CA sing N N 373 SER N H sing N N 374 SER N H2 sing N N 375 SER CA C sing N N 376 SER CA CB sing N N 377 SER CA HA sing N N 378 SER C O doub N N 379 SER C OXT sing N N 380 SER CB OG sing N N 381 SER CB HB2 sing N N 382 SER CB HB3 sing N N 383 SER OG HG sing N N 384 SER OXT HXT sing N N 385 THR N CA sing N N 386 THR N H sing N N 387 THR N H2 sing N N 388 THR CA C sing N N 389 THR CA CB sing N N 390 THR CA HA sing N N 391 THR C O doub N N 392 THR C OXT sing N N 393 THR CB OG1 sing N N 394 THR CB CG2 sing N N 395 THR CB HB sing N N 396 THR OG1 HG1 sing N N 397 THR CG2 HG21 sing N N 398 THR CG2 HG22 sing N N 399 THR CG2 HG23 sing N N 400 THR OXT HXT sing N N 401 TRP N CA sing N N 402 TRP N H sing N N 403 TRP N H2 sing N N 404 TRP CA C sing N N 405 TRP CA CB sing N N 406 TRP CA HA sing N N 407 TRP C O doub N N 408 TRP C OXT sing N N 409 TRP CB CG sing N N 410 TRP CB HB2 sing N N 411 TRP CB HB3 sing N N 412 TRP CG CD1 doub Y N 413 TRP CG CD2 sing Y N 414 TRP CD1 NE1 sing Y N 415 TRP CD1 HD1 sing N N 416 TRP CD2 CE2 doub Y N 417 TRP CD2 CE3 sing Y N 418 TRP NE1 CE2 sing Y N 419 TRP NE1 HE1 sing N N 420 TRP CE2 CZ2 sing Y N 421 TRP CE3 CZ3 doub Y N 422 TRP CE3 HE3 sing N N 423 TRP CZ2 CH2 doub Y N 424 TRP CZ2 HZ2 sing N N 425 TRP CZ3 CH2 sing Y N 426 TRP CZ3 HZ3 sing N N 427 TRP CH2 HH2 sing N N 428 TRP OXT HXT sing N N 429 TYR N CA sing N N 430 TYR N H sing N N 431 TYR N H2 sing N N 432 TYR CA C sing N N 433 TYR CA CB sing N N 434 TYR CA HA sing N N 435 TYR C O doub N N 436 TYR C OXT sing N N 437 TYR CB CG sing N N 438 TYR CB HB2 sing N N 439 TYR CB HB3 sing N N 440 TYR CG CD1 doub Y N 441 TYR CG CD2 sing Y N 442 TYR CD1 CE1 sing Y N 443 TYR CD1 HD1 sing N N 444 TYR CD2 CE2 doub Y N 445 TYR CD2 HD2 sing N N 446 TYR CE1 CZ doub Y N 447 TYR CE1 HE1 sing N N 448 TYR CE2 CZ sing Y N 449 TYR CE2 HE2 sing N N 450 TYR CZ OH sing N N 451 TYR OH HH sing N N 452 TYR OXT HXT sing N N 453 VAL N CA sing N N 454 VAL N H sing N N 455 VAL N H2 sing N N 456 VAL CA C sing N N 457 VAL CA CB sing N N 458 VAL CA HA sing N N 459 VAL C O doub N N 460 VAL C OXT sing N N 461 VAL CB CG1 sing N N 462 VAL CB CG2 sing N N 463 VAL CB HB sing N N 464 VAL CG1 HG11 sing N N 465 VAL CG1 HG12 sing N N 466 VAL CG1 HG13 sing N N 467 VAL CG2 HG21 sing N N 468 VAL CG2 HG22 sing N N 469 VAL CG2 HG23 sing N N 470 VAL OXT HXT sing N N 471 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1SHH _pdbx_initial_refinement_model.details 'PDB ENTRY 1SHH' # _atom_sites.entry_id 1Z8J _atom_sites.fract_transf_matrix[1][1] 0.020117 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013596 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011099 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S ZN # loop_