HEADER DNA BINDING PROTEIN 01-APR-05 1Z9F TITLE CRYSTAL STRUCTURE OF SINGLE STRANDED DNA-BINDING PROTEIN (TM0604) FROM TITLE 2 THERMOTOGA MARITIMA AT 2.60 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SINGLE-STRAND BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SSB, HELIX-DESTABILIZING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: SSB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TM0604, SINGLE STRANDED DNA-BINDING PROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 20-SEP-23 1Z9F 1 REMARK REVDAT 6 25-JAN-23 1Z9F 1 SEQADV REVDAT 5 13-JUL-11 1Z9F 1 VERSN REVDAT 4 24-FEB-09 1Z9F 1 VERSN REVDAT 3 03-OCT-06 1Z9F 1 JRNL REVDAT 2 03-MAY-05 1Z9F 1 REMARK REVDAT 1 12-APR-05 1Z9F 0 JRNL AUTH M.DIDONATO,S.S.KRISHNA,R.SCHWARZENBACHER,D.MCMULLAN, JRNL AUTH 2 L.JAROSZEWSKI,M.D.MILLER,P.ABDUBEK,S.AGARWALLA,E.AMBING, JRNL AUTH 3 H.AXELROD,T.BIORAC,H.J.CHIU,A.M.DEACON,M.A.ELSLIGER, JRNL AUTH 4 J.FEUERHELM,A.GODZIK,C.GRITTINI,S.K.GRZECHNIK,J.HALE, JRNL AUTH 5 E.HAMPTON,J.HAUGEN,M.HORNSBY,H.E.KLOCK,M.W.KNUTH,E.KOESEMA, JRNL AUTH 6 A.KREUSCH,P.KUHN,S.A.LESLEY,K.MOY,E.NIGOGHOSSIAN,L.OKACH, JRNL AUTH 7 J.PAULSEN,K.QUIJANO,R.REYES,C.RIFE,G.SPRAGGON,R.C.STEVENS, JRNL AUTH 8 H.VAN DEN BEDEM,J.VELASQUEZ,A.WHITE,G.WOLF,Q.XU,K.O.HODGSON, JRNL AUTH 9 J.WOOLEY,I.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF A SINGLE-STRANDED DNA-BINDING PROTEIN JRNL TITL 2 (TM0604) FROM THERMOTOGA MARITIMA AT 2.60 A RESOLUTION. JRNL REF PROTEINS V. 63 256 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 16435371 JRNL DOI 10.1002/PROT.20841 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 68.4 REMARK 3 NUMBER OF REFLECTIONS : 3902 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 420 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 119 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 28.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.1780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 14 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.10000 REMARK 3 B22 (A**2) : 1.84000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.552 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.356 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.229 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.393 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 748 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 738 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1005 ; 1.492 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1679 ; 0.827 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 87 ; 8.732 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 35 ;27.089 ;20.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 136 ;17.262 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;18.607 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 119 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 798 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 182 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 141 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 779 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 355 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 525 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 26 ; 0.205 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.019 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.215 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 84 ; 0.185 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.143 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 477 ; 0.514 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 183 ; 0.099 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 728 ; 0.838 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 317 ; 1.361 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 277 ; 2.125 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): -7.7347 -7.4830 -31.5331 REMARK 3 T TENSOR REMARK 3 T11: -0.3493 T22: 0.2666 REMARK 3 T33: -0.4051 T12: -0.1510 REMARK 3 T13: 0.1164 T23: 0.2192 REMARK 3 L TENSOR REMARK 3 L11: 14.7261 L22: 10.2611 REMARK 3 L33: 7.7716 L12: 2.3477 REMARK 3 L13: -0.1564 L23: -1.2971 REMARK 3 S TENSOR REMARK 3 S11: -0.1941 S12: -1.6644 S13: -1.1986 REMARK 3 S21: 0.9230 S22: -0.1079 S23: 0.7420 REMARK 3 S31: 0.7751 S32: -0.8659 S33: 0.3021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. THE NOMINAL REMARK 3 RESOLUTION IS 2.6 A WITH 739 OBSERVED REMARK 3 REFLECTIONS BETWEEN 2.6-2.3 (39 % COMPLETE FOR THIS REMARK 3 SHELL) INCLUDED IN THE REFINEMENT. REMARK 4 REMARK 4 1Z9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-APR-05. REMARK 100 THE DEPOSITION ID IS D_1000032464. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL, CYLINDRICALLY REMARK 200 BENT, SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4323 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 47.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 68.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32400 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1SRU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25.0% MPD, 0.1M TRIS PH 8.0, VAPOR REMARK 280 DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.70300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 43.21550 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.70300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.21550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.70300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.21550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.70300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 43.21550 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 43.21550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 43.21550 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 43.21550 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 43.21550 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 41.70300 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 41.70300 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 41.70300 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 38.29450 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 41.70300 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 8090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -86.43100 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -86.43100 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 152 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 SER A 24 REMARK 465 GLY A 25 REMARK 465 VAL A 38 REMARK 465 PRO A 39 REMARK 465 ARG A 40 REMARK 465 LYS A 41 REMARK 465 ASN A 42 REMARK 465 ALA A 43 REMARK 465 PRO A 44 REMARK 465 ASP A 45 REMARK 465 ASP A 46 REMARK 465 ALA A 47 REMARK 465 GLN A 48 REMARK 465 TRP A 86 REMARK 465 GLU A 87 REMARK 465 THR A 88 REMARK 465 PRO A 89 REMARK 465 THR A 90 REMARK 465 GLY A 91 REMARK 465 GLU A 92 REMARK 465 ARG A 109 REMARK 465 LYS A 110 REMARK 465 PRO A 111 REMARK 465 ALA A 112 REMARK 465 GLU A 113 REMARK 465 THR A 114 REMARK 465 VAL A 115 REMARK 465 SER A 116 REMARK 465 GLU A 117 REMARK 465 THR A 118 REMARK 465 GLU A 119 REMARK 465 GLU A 120 REMARK 465 GLU A 121 REMARK 465 LEU A 122 REMARK 465 GLU A 123 REMARK 465 ILE A 124 REMARK 465 PRO A 125 REMARK 465 GLU A 126 REMARK 465 GLU A 127 REMARK 465 ASP A 128 REMARK 465 PHE A 129 REMARK 465 SER A 130 REMARK 465 SER A 131 REMARK 465 ASP A 132 REMARK 465 THR A 133 REMARK 465 PHE A 134 REMARK 465 SER A 135 REMARK 465 GLU A 136 REMARK 465 ASP A 137 REMARK 465 GLU A 138 REMARK 465 PRO A 139 REMARK 465 PRO A 140 REMARK 465 PHE A 141 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 54 NE CZ NH1 NH2 REMARK 470 ARG A 60 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 71 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -57.81 172.37 REMARK 500 SER A 2 19.88 104.66 REMARK 500 ARG A 20 85.22 -166.68 REMARK 500 THR A 22 -166.55 -76.31 REMARK 500 MET A 83 70.74 -111.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 22 LEU A 23 146.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 282477 RELATED DB: TARGETDB DBREF 1Z9F A 1 141 UNP Q9WZ73 SSB_THEMA 1 141 SEQADV 1Z9F MET A -11 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F GLY A -10 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F SER A -9 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F ASP A -8 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F LYS A -7 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F ILE A -6 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F HIS A -5 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F HIS A -4 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F HIS A -3 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F HIS A -2 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F HIS A -1 UNP Q9WZ73 EXPRESSION TAG SEQADV 1Z9F HIS A 0 UNP Q9WZ73 EXPRESSION TAG SEQRES 1 A 153 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 A 153 SER PHE PHE ASN LYS ILE ILE LEU ILE GLY ARG LEU VAL SEQRES 3 A 153 ARG ASP PRO GLU GLU ARG TYR THR LEU SER GLY THR PRO SEQRES 4 A 153 VAL THR THR PHE THR ILE ALA VAL ASP ARG VAL PRO ARG SEQRES 5 A 153 LYS ASN ALA PRO ASP ASP ALA GLN THR THR ASP PHE PHE SEQRES 6 A 153 ARG ILE VAL THR PHE GLY ARG LEU ALA GLU PHE ALA ARG SEQRES 7 A 153 THR TYR LEU THR LYS GLY ARG LEU VAL LEU VAL GLU GLY SEQRES 8 A 153 GLU MET ARG MET ARG ARG TRP GLU THR PRO THR GLY GLU SEQRES 9 A 153 LYS ARG VAL SER PRO GLU VAL VAL ALA ASN VAL VAL ARG SEQRES 10 A 153 PHE MET ASP ARG LYS PRO ALA GLU THR VAL SER GLU THR SEQRES 11 A 153 GLU GLU GLU LEU GLU ILE PRO GLU GLU ASP PHE SER SER SEQRES 12 A 153 ASP THR PHE SER GLU ASP GLU PRO PRO PHE FORMUL 2 HOH *14(H2 O) HELIX 1 1 GLY A 59 LEU A 69 1 11 SHEET 1 A 7 GLU A 18 TYR A 21 0 SHEET 2 A 7 PRO A 27 VAL A 35 -1 O THR A 30 N GLU A 18 SHEET 3 A 7 ASP A 51 PHE A 58 -1 O ILE A 55 N PHE A 31 SHEET 4 A 7 SER A 96 PHE A 106 1 O VAL A 99 N VAL A 56 SHEET 5 A 7 LEU A 74 ARG A 84 -1 N ARG A 84 O SER A 96 SHEET 6 A 7 ILE A 7 LEU A 13 -1 N LEU A 9 O VAL A 77 SHEET 7 A 7 PRO A 27 VAL A 35 -1 O ALA A 34 N ARG A 12 CRYST1 76.589 83.406 86.431 90.00 90.00 90.00 F 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013060 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011990 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011570 0.00000