HEADER LIGASE 07-APR-05 1ZAU TITLE ADENYLATION DOMAIN OF NAD+ DEPENDENT DNA LIGASE FROM M.TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ADENYLATION DOMAIN (RESIDUES 1-328); COMPND 5 SYNONYM: POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]; COMPND 6 EC: 6.5.1.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: LIGA, LIG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE60 KEYWDS NAD+ DEPENDENT DNA LIGASE, AMP, M.TUBERCULOSIS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.K.SRIVASTAVA,R.RAMACHANDRAN REVDAT 5 14-FEB-24 1ZAU 1 REMARK REVDAT 4 11-OCT-17 1ZAU 1 REMARK REVDAT 3 24-FEB-09 1ZAU 1 VERSN REVDAT 2 30-AUG-05 1ZAU 1 JRNL REVDAT 1 05-JUL-05 1ZAU 0 JRNL AUTH S.K.SRIVASTAVA,R.P.TRIPATHI,R.RAMACHANDRAN JRNL TITL NAD+-DEPENDENT DNA LIGASE (RV3014C) FROM MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS: CRYSTAL STRUCTURE OF THE ADENYLATION DOMAIN JRNL TITL 3 AND IDENTIFICATION OF NOVEL INHIBITORS JRNL REF J.BIOL.CHEM. V. 280 30273 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15901723 JRNL DOI 10.1074/JBC.M503780200 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 8364 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : R-FREE REMARK 3 FREE R VALUE TEST SET SELECTION : 10% OF THE REFLECTIONS REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.314 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 974 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2271 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM SIGMAA (A) : 0.62 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.54 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.56 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.540 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZAU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-05. REMARK 100 THE DEPOSITION ID IS D_1000032509. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10337 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.15300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAD, NACL, NA-HEPES, AMMONIUM REMARK 280 SULPHATE, PH 7.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.46667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 138.93333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 104.20000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 173.66667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.73333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 69.46667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 138.93333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 173.66667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 104.20000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 34.73333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 5 REMARK 465 ALA A 6 REMARK 465 ASP A 7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 24 CG1 CG2 REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 31 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE A 38 CG1 CG2 CD1 REMARK 470 GLU A 46 CG CD OE1 OE2 REMARK 470 ARG A 50 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 57 CG CD OE1 NE2 REMARK 470 LEU A 61 CG CD1 CD2 REMARK 470 ARG A 62 CG CD NE CZ NH1 NH2 REMARK 470 THR A 63 OG1 CG2 REMARK 470 LEU A 70 CG CD1 CD2 REMARK 470 VAL A 71 CB CG1 CG2 REMARK 470 ASP A 84 CG OD1 OD2 REMARK 470 PHE A 96 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 101 CG CD1 CD2 REMARK 470 TRP A 104 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 104 CZ3 CH2 REMARK 470 ILE A 108 CG1 CG2 CD1 REMARK 470 GLU A 111 CG CD OE1 OE2 REMARK 470 VAL A 112 CG1 CG2 REMARK 470 ILE A 124 CG1 CG2 CD1 REMARK 470 VAL A 127 CG1 CG2 REMARK 470 LEU A 129 CG CD1 CD2 REMARK 470 SER A 130 OG REMARK 470 VAL A 132 CG1 CG2 REMARK 470 LEU A 138 CG CD1 CD2 REMARK 470 THR A 139 OG1 CG2 REMARK 470 ARG A 140 CG CD NE CZ NH1 NH2 REMARK 470 SER A 142 OG REMARK 470 ARG A 148 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 158 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 163 CG1 CG2 REMARK 470 THR A 168 OG1 CG2 REMARK 470 ASP A 171 CG OD1 OD2 REMARK 470 ASP A 172 CG OD1 OD2 REMARK 470 GLU A 177 CG CD OE1 OE2 REMARK 470 ARG A 188 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 189 CG CD1 CD2 REMARK 470 ASP A 191 CG OD1 OD2 REMARK 470 GLN A 193 CG CD OE1 NE2 REMARK 470 SER A 198 OG REMARK 470 VAL A 200 CG1 CG2 REMARK 470 GLU A 201 CG CD OE1 OE2 REMARK 470 SER A 213 OG REMARK 470 ARG A 228 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 230 CG CD NE CZ NH1 NH2 REMARK 470 CYS A 235 SG REMARK 470 ARG A 245 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 249 CG CD1 CD2 REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 259 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 259 CZ3 CH2 REMARK 470 SER A 264 OG REMARK 470 GLU A 265 CG CD OE1 OE2 REMARK 470 THR A 267 OG1 CG2 REMARK 470 THR A 268 OG1 CG2 REMARK 470 ASP A 272 CG OD1 OD2 REMARK 470 ARG A 277 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 279 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 280 CG1 CG2 CD1 REMARK 470 ASP A 281 CG OD1 OD2 REMARK 470 GLU A 285 CG CD OE1 OE2 REMARK 470 HIS A 286 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 289 CG CD OE1 OE2 REMARK 470 VAL A 290 CG1 CG2 REMARK 470 ASP A 291 CG OD1 OD2 REMARK 470 HIS A 292 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 294 CG1 CG2 CD1 REMARK 470 VAL A 299 CG1 CG2 REMARK 470 VAL A 301 CG1 CG2 REMARK 470 GLU A 303 CG CD OE1 OE2 REMARK 470 ARG A 309 CG CD NE CZ NH1 NH2 REMARK 470 SER A 312 OG REMARK 470 SER A 314 OG REMARK 470 ILE A 321 CG1 CG2 CD1 REMARK 470 LYS A 324 CG CD CE NZ REMARK 470 TYR A 325 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 15 43.07 -65.19 REMARK 500 GLN A 16 -48.38 -172.72 REMARK 500 TRP A 17 -96.39 -55.97 REMARK 500 TYR A 32 -146.19 -62.17 REMARK 500 VAL A 33 84.63 -36.46 REMARK 500 ARG A 34 -34.46 159.20 REMARK 500 ALA A 36 97.33 -161.68 REMARK 500 ILE A 39 -144.15 -75.92 REMARK 500 ASP A 41 -41.55 -16.06 REMARK 500 GLU A 52 -81.79 -53.74 REMARK 500 LEU A 54 27.94 -75.71 REMARK 500 GLU A 60 44.81 -76.16 REMARK 500 LEU A 61 41.98 -173.66 REMARK 500 PRO A 64 -1.86 -57.40 REMARK 500 THR A 68 -88.27 -80.99 REMARK 500 LEU A 70 -58.68 -179.74 REMARK 500 VAL A 71 67.92 -66.04 REMARK 500 ALA A 74 -136.22 -92.85 REMARK 500 ASP A 79 29.61 -154.88 REMARK 500 PHE A 80 71.06 24.10 REMARK 500 PRO A 82 109.21 -43.04 REMARK 500 HIS A 85 -135.71 -102.25 REMARK 500 LEU A 86 -40.15 -147.93 REMARK 500 GLU A 87 -79.97 -93.77 REMARK 500 ARG A 88 -24.76 174.38 REMARK 500 MET A 89 81.22 42.19 REMARK 500 SER A 91 -141.65 -89.43 REMARK 500 ASP A 93 -173.63 -64.04 REMARK 500 ASP A 99 -9.21 -57.37 REMARK 500 TRP A 104 -30.36 -32.63 REMARK 500 ALA A 110 -88.35 -69.25 REMARK 500 VAL A 112 -30.87 168.93 REMARK 500 ALA A 116 1.36 -159.47 REMARK 500 HIS A 117 112.26 75.95 REMARK 500 GLU A 135 74.80 54.57 REMARK 500 ALA A 161 -89.83 -61.01 REMARK 500 ASP A 162 -23.38 -31.88 REMARK 500 ASP A 171 -156.81 71.60 REMARK 500 GLU A 177 25.66 -72.40 REMARK 500 VAL A 178 -78.42 -168.90 REMARK 500 LEU A 179 91.38 54.85 REMARK 500 ALA A 197 -39.59 -37.09 REMARK 500 LEU A 199 -102.12 -170.27 REMARK 500 VAL A 200 -26.12 78.78 REMARK 500 GLU A 201 -106.78 172.16 REMARK 500 GLU A 202 42.53 27.11 REMARK 500 LYS A 204 -127.85 -133.39 REMARK 500 ALA A 208 -74.26 -65.37 REMARK 500 ARG A 211 -39.20 -39.13 REMARK 500 ALA A 214 -75.33 -69.35 REMARK 500 REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 AMP A 400 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 400 DBREF 1ZAU A 1 328 UNP P63973 DNLJ_MYCTU 1 328 SEQRES 1 A 328 MET SER SER PRO ASP ALA ASP GLN THR ALA PRO GLU VAL SEQRES 2 A 328 LEU ARG GLN TRP GLN ALA LEU ALA GLU GLU VAL ARG GLU SEQRES 3 A 328 HIS GLN PHE ARG TYR TYR VAL ARG ASP ALA PRO ILE ILE SEQRES 4 A 328 SER ASP ALA GLU PHE ASP GLU LEU LEU ARG ARG LEU GLU SEQRES 5 A 328 ALA LEU GLU GLU GLN HIS PRO GLU LEU ARG THR PRO ASP SEQRES 6 A 328 SER PRO THR GLN LEU VAL GLY GLY ALA GLY PHE ALA THR SEQRES 7 A 328 ASP PHE GLU PRO VAL ASP HIS LEU GLU ARG MET LEU SER SEQRES 8 A 328 LEU ASP ASN ALA PHE THR ALA ASP GLU LEU ALA ALA TRP SEQRES 9 A 328 ALA GLY ARG ILE HIS ALA GLU VAL GLY ASP ALA ALA HIS SEQRES 10 A 328 TYR LEU CYS GLU LEU LYS ILE ASP GLY VAL ALA LEU SER SEQRES 11 A 328 LEU VAL TYR ARG GLU GLY ARG LEU THR ARG ALA SER THR SEQRES 12 A 328 ARG GLY ASP GLY ARG THR GLY GLU ASP VAL THR LEU ASN SEQRES 13 A 328 ALA ARG THR ILE ALA ASP VAL PRO GLU ARG LEU THR PRO SEQRES 14 A 328 GLY ASP ASP TYR PRO VAL PRO GLU VAL LEU GLU VAL ARG SEQRES 15 A 328 GLY GLU VAL PHE PHE ARG LEU ASP ASP PHE GLN ALA LEU SEQRES 16 A 328 ASN ALA SER LEU VAL GLU GLU GLY LYS ALA PRO PHE ALA SEQRES 17 A 328 ASN PRO ARG ASN SER ALA ALA GLY SER LEU ARG GLN LYS SEQRES 18 A 328 ASP PRO ALA VAL THR ALA ARG ARG ARG LEU ARG MET ILE SEQRES 19 A 328 CYS HIS GLY LEU GLY HIS VAL GLU GLY PHE ARG PRO ALA SEQRES 20 A 328 THR LEU HIS GLN ALA TYR LEU ALA LEU ARG ALA TRP GLY SEQRES 21 A 328 LEU PRO VAL SER GLU HIS THR THR LEU ALA THR ASP LEU SEQRES 22 A 328 ALA GLY VAL ARG GLU ARG ILE ASP TYR TRP GLY GLU HIS SEQRES 23 A 328 ARG HIS GLU VAL ASP HIS GLU ILE ASP GLY VAL VAL VAL SEQRES 24 A 328 LYS VAL ASP GLU VAL ALA LEU GLN ARG ARG LEU GLY SER SEQRES 25 A 328 THR SER ARG ALA PRO ARG TRP ALA ILE ALA TYR LYS TYR SEQRES 26 A 328 PRO PRO GLU HET AMP A 400 22 HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 HOH *4(H2 O) HELIX 1 1 THR A 9 ARG A 15 1 7 HELIX 2 2 GLN A 16 TYR A 32 1 17 HELIX 3 3 ASP A 41 GLN A 57 1 17 HELIX 4 4 THR A 97 ARG A 107 1 11 HELIX 5 5 ILE A 108 ALA A 110 5 3 HELIX 6 6 ARG A 134 ARG A 137 5 4 HELIX 7 7 VAL A 153 ILE A 160 1 8 HELIX 8 8 ARG A 188 SER A 198 1 11 HELIX 9 9 ASN A 209 ARG A 219 1 11 HELIX 10 10 ASP A 222 ARG A 229 1 8 HELIX 11 11 THR A 248 ALA A 258 1 11 HELIX 12 12 THR A 271 TRP A 283 1 13 HELIX 13 13 GLU A 303 ARG A 308 1 6 SHEET 1 A 2 VAL A 83 ASP A 84 0 SHEET 2 A 2 THR A 149 GLY A 150 -1 O GLY A 150 N VAL A 83 SHEET 1 B 3 TYR A 118 ILE A 124 0 SHEET 2 B 3 ILE A 294 VAL A 301 -1 O LYS A 300 N LEU A 119 SHEET 3 B 3 TYR A 323 LYS A 324 -1 O TYR A 323 N VAL A 297 SHEET 1 C 2 VAL A 127 VAL A 132 0 SHEET 2 C 2 GLU A 180 VAL A 185 -1 O VAL A 181 N LEU A 131 SITE 1 AC1 12 LEU A 90 SER A 91 LEU A 92 ASN A 94 SITE 2 AC1 12 GLU A 121 LEU A 122 LYS A 123 ILE A 124 SITE 3 AC1 12 ALA A 128 GLU A 184 HIS A 236 LYS A 300 CRYST1 95.800 95.800 208.400 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010438 0.006027 0.000000 0.00000 SCALE2 0.000000 0.012053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004798 0.00000