data_1ZAY # _entry.id 1ZAY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZAY pdb_00001zay 10.2210/pdb1zay/pdb NDB PD0109 ? ? RCSB RCSB007336 ? ? WWPDB D_1000007336 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZAY _pdbx_database_status.recvd_initial_deposition_date 1998-12-16 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zheleznova, E.E.' 1 'Brennan, R.G.' 2 # _citation.id primary _citation.title 'The Roles of Exocyclic Groups in the Central Base-Pair Step in Modulating the Affinity of PurR for its Operator' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zheleznova, E.E.' 1 ? primary 'Brennan, R.G.' 2 ? # _cell.entry_id 1ZAY _cell.length_a 176.449 _cell.length_b 95.187 _cell.length_c 81.777 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZAY _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*AP*CP*GP*AP*AP*AP*AP*TP*(1AP)P*TP*TP*TP*TP*CP*GP*T)-3') ; 5224.436 1 ? ? ? ? 2 polymer man 'PROTEIN (PURINE REPRESSOR)' 38091.594 1 ? ? ? ? 3 non-polymer syn HYPOXANTHINE 136.111 1 ? ? ? ? 4 water nat water 18.015 25 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name PURR # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DA)(DA)(DC)(DG)(DA)(DA)(DA)(DA)(DT)(1AP)(DT)(DT)(DT)(DT)(DC)(DG)(DT)' AACGAAAATATTTTCGT M ? 2 'polypeptide(L)' no no ;ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAV EKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDN AFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEV HPRLIERRSVADGPFRDYRR ; ;ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAV EKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDN AFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEV HPRLIERRSVADGPFRDYRR ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DA n 1 8 DA n 1 9 DT n 1 10 1AP n 1 11 DT n 1 12 DT n 1 13 DT n 1 14 DT n 1 15 DC n 1 16 DG n 1 17 DT n 2 1 ALA n 2 2 THR n 2 3 ILE n 2 4 LYS n 2 5 ASP n 2 6 VAL n 2 7 ALA n 2 8 LYS n 2 9 ARG n 2 10 ALA n 2 11 ASN n 2 12 VAL n 2 13 SER n 2 14 THR n 2 15 THR n 2 16 THR n 2 17 VAL n 2 18 SER n 2 19 HIS n 2 20 VAL n 2 21 ILE n 2 22 ASN n 2 23 LYS n 2 24 THR n 2 25 ARG n 2 26 PHE n 2 27 VAL n 2 28 ALA n 2 29 GLU n 2 30 GLU n 2 31 THR n 2 32 ARG n 2 33 ASN n 2 34 ALA n 2 35 VAL n 2 36 TRP n 2 37 ALA n 2 38 ALA n 2 39 ILE n 2 40 LYS n 2 41 GLU n 2 42 LEU n 2 43 HIS n 2 44 TYR n 2 45 SER n 2 46 PRO n 2 47 SER n 2 48 ALA n 2 49 VAL n 2 50 ALA n 2 51 ARG n 2 52 SER n 2 53 LEU n 2 54 LYS n 2 55 VAL n 2 56 ASN n 2 57 HIS n 2 58 THR n 2 59 LYS n 2 60 SER n 2 61 ILE n 2 62 GLY n 2 63 LEU n 2 64 LEU n 2 65 ALA n 2 66 THR n 2 67 SER n 2 68 SER n 2 69 GLU n 2 70 ALA n 2 71 ALA n 2 72 TYR n 2 73 PHE n 2 74 ALA n 2 75 GLU n 2 76 ILE n 2 77 ILE n 2 78 GLU n 2 79 ALA n 2 80 VAL n 2 81 GLU n 2 82 LYS n 2 83 ASN n 2 84 CYS n 2 85 PHE n 2 86 GLN n 2 87 LYS n 2 88 GLY n 2 89 TYR n 2 90 THR n 2 91 LEU n 2 92 ILE n 2 93 LEU n 2 94 GLY n 2 95 ASN n 2 96 ALA n 2 97 TRP n 2 98 ASN n 2 99 ASN n 2 100 LEU n 2 101 GLU n 2 102 LYS n 2 103 GLN n 2 104 ARG n 2 105 ALA n 2 106 TYR n 2 107 LEU n 2 108 SER n 2 109 MET n 2 110 MET n 2 111 ALA n 2 112 GLN n 2 113 LYS n 2 114 ARG n 2 115 VAL n 2 116 ASP n 2 117 GLY n 2 118 LEU n 2 119 LEU n 2 120 VAL n 2 121 MET n 2 122 CYS n 2 123 SER n 2 124 GLU n 2 125 TYR n 2 126 PRO n 2 127 GLU n 2 128 PRO n 2 129 LEU n 2 130 LEU n 2 131 ALA n 2 132 MET n 2 133 LEU n 2 134 GLU n 2 135 GLU n 2 136 TYR n 2 137 ARG n 2 138 HIS n 2 139 ILE n 2 140 PRO n 2 141 MET n 2 142 VAL n 2 143 VAL n 2 144 MET n 2 145 ASP n 2 146 TRP n 2 147 GLY n 2 148 GLU n 2 149 ALA n 2 150 LYS n 2 151 ALA n 2 152 ASP n 2 153 PHE n 2 154 THR n 2 155 ASP n 2 156 ALA n 2 157 VAL n 2 158 ILE n 2 159 ASP n 2 160 ASN n 2 161 ALA n 2 162 PHE n 2 163 GLU n 2 164 GLY n 2 165 GLY n 2 166 TYR n 2 167 MET n 2 168 ALA n 2 169 GLY n 2 170 ARG n 2 171 TYR n 2 172 LEU n 2 173 ILE n 2 174 GLU n 2 175 ARG n 2 176 GLY n 2 177 HIS n 2 178 ARG n 2 179 GLU n 2 180 ILE n 2 181 GLY n 2 182 VAL n 2 183 ILE n 2 184 PRO n 2 185 GLY n 2 186 PRO n 2 187 LEU n 2 188 GLU n 2 189 ARG n 2 190 ASN n 2 191 THR n 2 192 GLY n 2 193 ALA n 2 194 GLY n 2 195 ARG n 2 196 LEU n 2 197 ALA n 2 198 GLY n 2 199 PHE n 2 200 MET n 2 201 LYS n 2 202 ALA n 2 203 MET n 2 204 GLU n 2 205 GLU n 2 206 ALA n 2 207 MET n 2 208 ILE n 2 209 LYS n 2 210 VAL n 2 211 PRO n 2 212 GLU n 2 213 SER n 2 214 TRP n 2 215 ILE n 2 216 VAL n 2 217 GLN n 2 218 GLY n 2 219 ASP n 2 220 PHE n 2 221 GLU n 2 222 PRO n 2 223 GLU n 2 224 SER n 2 225 GLY n 2 226 TYR n 2 227 ARG n 2 228 ALA n 2 229 MET n 2 230 GLN n 2 231 GLN n 2 232 ILE n 2 233 LEU n 2 234 SER n 2 235 GLN n 2 236 PRO n 2 237 HIS n 2 238 ARG n 2 239 PRO n 2 240 THR n 2 241 ALA n 2 242 VAL n 2 243 PHE n 2 244 CYS n 2 245 GLY n 2 246 GLY n 2 247 ASP n 2 248 ILE n 2 249 MET n 2 250 ALA n 2 251 MET n 2 252 GLY n 2 253 ALA n 2 254 LEU n 2 255 CYS n 2 256 ALA n 2 257 ALA n 2 258 ASP n 2 259 GLU n 2 260 MET n 2 261 GLY n 2 262 LEU n 2 263 ARG n 2 264 VAL n 2 265 PRO n 2 266 GLN n 2 267 ASP n 2 268 VAL n 2 269 SER n 2 270 LEU n 2 271 ILE n 2 272 GLY n 2 273 TYR n 2 274 ASP n 2 275 ASN n 2 276 VAL n 2 277 ARG n 2 278 ASN n 2 279 ALA n 2 280 ARG n 2 281 TYR n 2 282 PHE n 2 283 THR n 2 284 PRO n 2 285 ALA n 2 286 LEU n 2 287 THR n 2 288 THR n 2 289 ILE n 2 290 HIS n 2 291 GLN n 2 292 PRO n 2 293 LYS n 2 294 ASP n 2 295 SER n 2 296 LEU n 2 297 GLY n 2 298 GLU n 2 299 THR n 2 300 ALA n 2 301 PHE n 2 302 ASN n 2 303 MET n 2 304 LEU n 2 305 LEU n 2 306 ASP n 2 307 ARG n 2 308 ILE n 2 309 VAL n 2 310 ASN n 2 311 LYS n 2 312 ARG n 2 313 GLU n 2 314 GLU n 2 315 PRO n 2 316 GLN n 2 317 SER n 2 318 ILE n 2 319 GLU n 2 320 VAL n 2 321 HIS n 2 322 PRO n 2 323 ARG n 2 324 LEU n 2 325 ILE n 2 326 GLU n 2 327 ARG n 2 328 ARG n 2 329 SER n 2 330 VAL n 2 331 ALA n 2 332 ASP n 2 333 GLY n 2 334 PRO n 2 335 PHE n 2 336 ARG n 2 337 ASP n 2 338 TYR n 2 339 ARG n 2 340 ARG n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP PURR_ECOLI 2 ? ? P0ACP7 ? 2 PDB 1ZAY 1 ? ? 1ZAY ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZAY A 1 ? 340 ? P0ACP7 1 ? 340 ? 2 341 2 2 1ZAY M 1 ? 17 ? 1ZAY 699 ? 715 ? 699 715 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1AP 'DNA linking' n '2,6-DIAMINOPURINE NUCLEOTIDE' ? 'C10 H15 N6 O6 P' 346.236 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HPA non-polymer . HYPOXANTHINE ? 'C5 H4 N4 O' 136.111 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ZAY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.96 _exptl_crystal.density_percent_sol 68.97 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'pH 7.5, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1ZAY _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 60.0 _reflns.d_resolution_high 2.7 _reflns.number_obs 17098 _reflns.number_all ? _reflns.percent_possible_obs 88 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0710000 _reflns.pdbx_netI_over_sigmaI 14.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.0 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 75 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ZAY _refine.ls_number_reflns_obs 17098 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 88 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1800000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1PNR' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'TNT BCORREL' _refine.pdbx_stereochemistry_target_values 'TNT CDX_PROTGEO' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2652 _refine_hist.pdbx_number_atoms_nucleic_acid 347 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 3034 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? t_angle_deg 1.114 ? ? ? 'X-RAY DIFFRACTION' ? t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_gen_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_it ? ? ? ? 'X-RAY DIFFRACTION' ? t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1ZAY _pdbx_refine.R_factor_all_no_cutoff 0.1800000 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1ZAY _struct.title 'PURINE REPRESSOR-HYPOXANTHINE-MODIFIED-PURF-OPERATOR COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZAY _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'COMPLEX (DNA-BINDING REGULATION-MODIFIED DNA), TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE B 3 ? ALA B 10 ? ILE A 4 ALA A 11 1 ? 8 HELX_P HELX_P2 2 THR B 14 ? ASN B 22 ? THR A 15 ASN A 23 1 ? 9 HELX_P HELX_P3 3 GLU B 29 ? GLU B 41 ? GLU A 30 GLU A 42 1 ? 13 HELX_P HELX_P4 4 ALA B 48 ? VAL B 55 ? ALA A 49 VAL A 56 1 ? 8 HELX_P HELX_P5 5 ALA B 71 ? GLN B 86 ? ALA A 72 GLN A 87 1 ? 16 HELX_P HELX_P6 6 LEU B 100 ? LYS B 113 ? LEU A 101 LYS A 114 1 ? 14 HELX_P HELX_P7 7 GLU B 127 ? GLU B 135 ? GLU A 128 GLU A 136 1 ? 9 HELX_P HELX_P8 8 ALA B 161 ? ARG B 175 ? ALA A 162 ARG A 176 1 ? 15 HELX_P HELX_P9 9 ASN B 190 ? ALA B 206 ? ASN A 191 ALA A 207 1 ? 17 HELX_P HELX_P10 10 GLU B 212 ? TRP B 214 ? GLU A 213 TRP A 215 5 ? 3 HELX_P HELX_P11 11 PRO B 222 ? LEU B 233 ? PRO A 223 LEU A 234 1 ? 12 HELX_P HELX_P12 12 ASP B 247 ? GLU B 259 ? ASP A 248 GLU A 260 1 ? 13 HELX_P HELX_P13 13 ALA B 279 ? TYR B 281 ? ALA A 280 TYR A 282 5 ? 3 HELX_P HELX_P14 14 LYS B 293 ? VAL B 309 ? LYS A 294 VAL A 310 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DT 9 "O3'" ? ? ? 1_555 A 1AP 10 P ? ? M DT 707 M 1AP 708 1_555 ? ? ? ? ? ? ? 1.617 ? ? covale2 covale one ? A 1AP 10 "O3'" ? ? ? 1_555 A DT 11 P ? ? M 1AP 708 M DT 709 1_555 ? ? ? ? ? ? ? 1.606 ? ? hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 A DT 17 N3 ? ? M DA 700 M DT 715 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 A DT 17 O4 ? ? M DA 700 M DT 715 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 16 N1 ? ? M DC 701 M DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 16 O6 ? ? M DC 701 M DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 16 N2 ? ? M DC 701 M DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 15 N3 ? ? M DG 702 M DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 15 O2 ? ? M DG 702 M DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 15 N4 ? ? M DG 702 M DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 14 N3 ? ? M DA 703 M DT 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 14 O4 ? ? M DA 703 M DT 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 13 N3 ? ? M DA 704 M DT 711 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 13 O4 ? ? M DA 704 M DT 711 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 12 N3 ? ? M DA 705 M DT 710 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 12 O4 ? ? M DA 705 M DT 710 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 8 N1 ? ? ? 1_555 A DT 11 N3 ? ? M DA 706 M DT 709 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N6 ? ? ? 1_555 A DT 11 O4 ? ? M DA 706 M DT 709 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 9 O2 ? ? ? 1_555 A 1AP 10 N2 ? ? M DT 707 M 1AP 708 4_555 ? ? ? ? ? ? 'DT-1AP MISPAIR' ? ? ? hydrog18 hydrog ? ? A 1AP 10 N1 ? ? ? 1_555 A DT 9 O4 ? ? M 1AP 708 M DT 707 4_555 ? ? ? ? ? ? '1AP-DT MISPAIR' ? ? ? hydrog19 hydrog ? ? A DT 11 N3 ? ? ? 1_555 A DA 8 N1 ? ? M DT 709 M DA 706 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 11 O4 ? ? ? 1_555 A DA 8 N6 ? ? M DT 709 M DA 706 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 12 N3 ? ? ? 1_555 A DA 7 N1 ? ? M DT 710 M DA 705 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 12 O4 ? ? ? 1_555 A DA 7 N6 ? ? M DT 710 M DA 705 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 13 N3 ? ? ? 1_555 A DA 6 N1 ? ? M DT 711 M DA 704 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 13 O4 ? ? ? 1_555 A DA 6 N6 ? ? M DT 711 M DA 704 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 14 N3 ? ? ? 1_555 A DA 5 N1 ? ? M DT 712 M DA 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 14 O4 ? ? ? 1_555 A DA 5 N6 ? ? M DT 712 M DA 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 15 N3 ? ? ? 1_555 A DG 4 N1 ? ? M DC 713 M DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 15 N4 ? ? ? 1_555 A DG 4 O6 ? ? M DC 713 M DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 15 O2 ? ? ? 1_555 A DG 4 N2 ? ? M DC 713 M DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 3 N3 ? ? M DG 714 M DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 3 O2 ? ? M DG 714 M DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 3 N4 ? ? M DG 714 M DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 17 N3 ? ? ? 1_555 A DA 2 N1 ? ? M DT 715 M DA 700 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 17 O4 ? ? ? 1_555 A DA 2 N6 ? ? M DT 715 M DA 700 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 264 B . ? VAL 265 A PRO 265 B ? PRO 266 A 1 2.94 2 THR 283 B . ? THR 284 A PRO 284 B ? PRO 285 A 1 1.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR B 90 ? ASN B 95 ? THR A 91 ASN A 96 A 2 SER B 60 ? ALA B 65 ? SER A 61 ALA A 66 A 3 GLY B 117 ? VAL B 120 ? GLY A 118 VAL A 121 A 4 MET B 141 ? VAL B 143 ? MET A 142 VAL A 144 B 1 ASP B 155 ? ILE B 158 ? ASP A 156 ILE A 159 B 2 GLN B 316 ? GLU B 319 ? GLN A 317 GLU A 320 C 1 ILE B 180 ? ILE B 183 ? ILE A 181 ILE A 184 C 2 ALA B 241 ? CYS B 244 ? ALA A 242 CYS A 245 C 3 SER B 269 ? ASP B 274 ? SER A 270 ASP A 275 C 4 THR B 287 ? HIS B 290 ? THR A 288 HIS A 291 C 5 ARG B 323 ? ILE B 325 ? ARG A 324 ILE A 326 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR B 90 ? O THR A 91 N ILE B 61 ? N ILE A 62 A 2 3 O GLY B 62 ? O GLY A 63 N GLY B 117 ? N GLY A 118 A 3 4 O LEU B 118 ? O LEU A 119 N VAL B 142 ? N VAL A 143 B 1 2 O ALA B 156 ? O ALA A 157 N GLN B 316 ? N GLN A 317 C 1 2 O GLY B 181 ? O GLY A 182 N ALA B 241 ? N ALA A 242 C 2 3 O VAL B 242 ? O VAL A 243 N SER B 269 ? N SER A 270 C 3 4 O GLY B 272 ? O GLY A 273 N THR B 287 ? N THR A 288 C 4 5 O THR B 288 ? O THR A 289 N ILE B 325 ? N ILE A 326 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id HPA _struct_site.pdbx_auth_seq_id 599 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE HPA A 599' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 TYR B 72 ? TYR A 73 . ? 1_555 ? 2 AC1 8 PHE B 73 ? PHE A 74 . ? 1_555 ? 3 AC1 8 ARG B 189 ? ARG A 190 . ? 1_555 ? 4 AC1 8 THR B 191 ? THR A 192 . ? 1_555 ? 5 AC1 8 ARG B 195 ? ARG A 196 . ? 1_555 ? 6 AC1 8 PHE B 220 ? PHE A 221 . ? 1_555 ? 7 AC1 8 ASP B 274 ? ASP A 275 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 817 . ? 1_555 ? # _database_PDB_matrix.entry_id 1ZAY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ZAY _atom_sites.fract_transf_matrix[1][1] 0.005667 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010506 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012228 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 699 699 DA A M . n A 1 2 DA 2 700 700 DA A M . n A 1 3 DC 3 701 701 DC C M . n A 1 4 DG 4 702 702 DG G M . n A 1 5 DA 5 703 703 DA A M . n A 1 6 DA 6 704 704 DA A M . n A 1 7 DA 7 705 705 DA A M . n A 1 8 DA 8 706 706 DA A M . n A 1 9 DT 9 707 707 DT T M . n A 1 10 1AP 10 708 708 1AP 1AP M . n A 1 11 DT 11 709 709 DT T M . n A 1 12 DT 12 710 710 DT T M . n A 1 13 DT 13 711 711 DT T M . n A 1 14 DT 14 712 712 DT T M . n A 1 15 DC 15 713 713 DC C M . n A 1 16 DG 16 714 714 DG G M . n A 1 17 DT 17 715 715 DT T M . n B 2 1 ALA 1 2 ? ? ? A . n B 2 2 THR 2 3 3 THR THR A . n B 2 3 ILE 3 4 4 ILE ILE A . n B 2 4 LYS 4 5 5 LYS LYS A . n B 2 5 ASP 5 6 6 ASP ASP A . n B 2 6 VAL 6 7 7 VAL VAL A . n B 2 7 ALA 7 8 8 ALA ALA A . n B 2 8 LYS 8 9 9 LYS LYS A . n B 2 9 ARG 9 10 10 ARG ARG A . n B 2 10 ALA 10 11 11 ALA ALA A . n B 2 11 ASN 11 12 12 ASN ASN A . n B 2 12 VAL 12 13 13 VAL VAL A . n B 2 13 SER 13 14 14 SER SER A . n B 2 14 THR 14 15 15 THR THR A . n B 2 15 THR 15 16 16 THR THR A . n B 2 16 THR 16 17 17 THR THR A . n B 2 17 VAL 17 18 18 VAL VAL A . n B 2 18 SER 18 19 19 SER SER A . n B 2 19 HIS 19 20 20 HIS HIS A . n B 2 20 VAL 20 21 21 VAL VAL A . n B 2 21 ILE 21 22 22 ILE ILE A . n B 2 22 ASN 22 23 23 ASN ASN A . n B 2 23 LYS 23 24 24 LYS LYS A . n B 2 24 THR 24 25 25 THR THR A . n B 2 25 ARG 25 26 26 ARG ARG A . n B 2 26 PHE 26 27 27 PHE PHE A . n B 2 27 VAL 27 28 28 VAL VAL A . n B 2 28 ALA 28 29 29 ALA ALA A . n B 2 29 GLU 29 30 30 GLU GLU A . n B 2 30 GLU 30 31 31 GLU GLU A . n B 2 31 THR 31 32 32 THR THR A . n B 2 32 ARG 32 33 33 ARG ARG A . n B 2 33 ASN 33 34 34 ASN ASN A . n B 2 34 ALA 34 35 35 ALA ALA A . n B 2 35 VAL 35 36 36 VAL VAL A . n B 2 36 TRP 36 37 37 TRP TRP A . n B 2 37 ALA 37 38 38 ALA ALA A . n B 2 38 ALA 38 39 39 ALA ALA A . n B 2 39 ILE 39 40 40 ILE ILE A . n B 2 40 LYS 40 41 41 LYS LYS A . n B 2 41 GLU 41 42 42 GLU GLU A . n B 2 42 LEU 42 43 43 LEU LEU A . n B 2 43 HIS 43 44 44 HIS HIS A . n B 2 44 TYR 44 45 45 TYR TYR A . n B 2 45 SER 45 46 46 SER SER A . n B 2 46 PRO 46 47 47 PRO PRO A . n B 2 47 SER 47 48 48 SER SER A . n B 2 48 ALA 48 49 49 ALA ALA A . n B 2 49 VAL 49 50 50 VAL VAL A . n B 2 50 ALA 50 51 51 ALA ALA A . n B 2 51 ARG 51 52 52 ARG ARG A . n B 2 52 SER 52 53 53 SER SER A . n B 2 53 LEU 53 54 54 LEU LEU A . n B 2 54 LYS 54 55 55 LYS LYS A . n B 2 55 VAL 55 56 56 VAL VAL A . n B 2 56 ASN 56 57 57 ASN ASN A . n B 2 57 HIS 57 58 58 HIS HIS A . n B 2 58 THR 58 59 59 THR THR A . n B 2 59 LYS 59 60 60 LYS LYS A . n B 2 60 SER 60 61 61 SER SER A . n B 2 61 ILE 61 62 62 ILE ILE A . n B 2 62 GLY 62 63 63 GLY GLY A . n B 2 63 LEU 63 64 64 LEU LEU A . n B 2 64 LEU 64 65 65 LEU LEU A . n B 2 65 ALA 65 66 66 ALA ALA A . n B 2 66 THR 66 67 67 THR THR A . n B 2 67 SER 67 68 68 SER SER A . n B 2 68 SER 68 69 69 SER SER A . n B 2 69 GLU 69 70 70 GLU GLU A . n B 2 70 ALA 70 71 71 ALA ALA A . n B 2 71 ALA 71 72 72 ALA ALA A . n B 2 72 TYR 72 73 73 TYR TYR A . n B 2 73 PHE 73 74 74 PHE PHE A . n B 2 74 ALA 74 75 75 ALA ALA A . n B 2 75 GLU 75 76 76 GLU GLU A . n B 2 76 ILE 76 77 77 ILE ILE A . n B 2 77 ILE 77 78 78 ILE ILE A . n B 2 78 GLU 78 79 79 GLU GLU A . n B 2 79 ALA 79 80 80 ALA ALA A . n B 2 80 VAL 80 81 81 VAL VAL A . n B 2 81 GLU 81 82 82 GLU GLU A . n B 2 82 LYS 82 83 83 LYS LYS A . n B 2 83 ASN 83 84 84 ASN ASN A . n B 2 84 CYS 84 85 85 CYS CYS A . n B 2 85 PHE 85 86 86 PHE PHE A . n B 2 86 GLN 86 87 87 GLN GLN A . n B 2 87 LYS 87 88 88 LYS LYS A . n B 2 88 GLY 88 89 89 GLY GLY A . n B 2 89 TYR 89 90 90 TYR TYR A . n B 2 90 THR 90 91 91 THR THR A . n B 2 91 LEU 91 92 92 LEU LEU A . n B 2 92 ILE 92 93 93 ILE ILE A . n B 2 93 LEU 93 94 94 LEU LEU A . n B 2 94 GLY 94 95 95 GLY GLY A . n B 2 95 ASN 95 96 96 ASN ASN A . n B 2 96 ALA 96 97 97 ALA ALA A . n B 2 97 TRP 97 98 98 TRP TRP A . n B 2 98 ASN 98 99 99 ASN ASN A . n B 2 99 ASN 99 100 100 ASN ASN A . n B 2 100 LEU 100 101 101 LEU LEU A . n B 2 101 GLU 101 102 102 GLU GLU A . n B 2 102 LYS 102 103 103 LYS LYS A . n B 2 103 GLN 103 104 104 GLN GLN A . n B 2 104 ARG 104 105 105 ARG ARG A . n B 2 105 ALA 105 106 106 ALA ALA A . n B 2 106 TYR 106 107 107 TYR TYR A . n B 2 107 LEU 107 108 108 LEU LEU A . n B 2 108 SER 108 109 109 SER SER A . n B 2 109 MET 109 110 110 MET MET A . n B 2 110 MET 110 111 111 MET MET A . n B 2 111 ALA 111 112 112 ALA ALA A . n B 2 112 GLN 112 113 113 GLN GLN A . n B 2 113 LYS 113 114 114 LYS LYS A . n B 2 114 ARG 114 115 115 ARG ARG A . n B 2 115 VAL 115 116 116 VAL VAL A . n B 2 116 ASP 116 117 117 ASP ASP A . n B 2 117 GLY 117 118 118 GLY GLY A . n B 2 118 LEU 118 119 119 LEU LEU A . n B 2 119 LEU 119 120 120 LEU LEU A . n B 2 120 VAL 120 121 121 VAL VAL A . n B 2 121 MET 121 122 122 MET MET A . n B 2 122 CYS 122 123 123 CYS CYS A . n B 2 123 SER 123 124 124 SER SER A . n B 2 124 GLU 124 125 125 GLU GLU A . n B 2 125 TYR 125 126 126 TYR TYR A . n B 2 126 PRO 126 127 127 PRO PRO A . n B 2 127 GLU 127 128 128 GLU GLU A . n B 2 128 PRO 128 129 129 PRO PRO A . n B 2 129 LEU 129 130 130 LEU LEU A . n B 2 130 LEU 130 131 131 LEU LEU A . n B 2 131 ALA 131 132 132 ALA ALA A . n B 2 132 MET 132 133 133 MET MET A . n B 2 133 LEU 133 134 134 LEU LEU A . n B 2 134 GLU 134 135 135 GLU GLU A . n B 2 135 GLU 135 136 136 GLU GLU A . n B 2 136 TYR 136 137 137 TYR TYR A . n B 2 137 ARG 137 138 138 ARG ARG A . n B 2 138 HIS 138 139 139 HIS HIS A . n B 2 139 ILE 139 140 140 ILE ILE A . n B 2 140 PRO 140 141 141 PRO PRO A . n B 2 141 MET 141 142 142 MET MET A . n B 2 142 VAL 142 143 143 VAL VAL A . n B 2 143 VAL 143 144 144 VAL VAL A . n B 2 144 MET 144 145 145 MET MET A . n B 2 145 ASP 145 146 146 ASP ASP A . n B 2 146 TRP 146 147 147 TRP TRP A . n B 2 147 GLY 147 148 148 GLY GLY A . n B 2 148 GLU 148 149 149 GLU GLU A . n B 2 149 ALA 149 150 150 ALA ALA A . n B 2 150 LYS 150 151 151 LYS LYS A . n B 2 151 ALA 151 152 152 ALA ALA A . n B 2 152 ASP 152 153 153 ASP ASP A . n B 2 153 PHE 153 154 154 PHE PHE A . n B 2 154 THR 154 155 155 THR THR A . n B 2 155 ASP 155 156 156 ASP ASP A . n B 2 156 ALA 156 157 157 ALA ALA A . n B 2 157 VAL 157 158 158 VAL VAL A . n B 2 158 ILE 158 159 159 ILE ILE A . n B 2 159 ASP 159 160 160 ASP ASP A . n B 2 160 ASN 160 161 161 ASN ASN A . n B 2 161 ALA 161 162 162 ALA ALA A . n B 2 162 PHE 162 163 163 PHE PHE A . n B 2 163 GLU 163 164 164 GLU GLU A . n B 2 164 GLY 164 165 165 GLY GLY A . n B 2 165 GLY 165 166 166 GLY GLY A . n B 2 166 TYR 166 167 167 TYR TYR A . n B 2 167 MET 167 168 168 MET MET A . n B 2 168 ALA 168 169 169 ALA ALA A . n B 2 169 GLY 169 170 170 GLY GLY A . n B 2 170 ARG 170 171 171 ARG ARG A . n B 2 171 TYR 171 172 172 TYR TYR A . n B 2 172 LEU 172 173 173 LEU LEU A . n B 2 173 ILE 173 174 174 ILE ILE A . n B 2 174 GLU 174 175 175 GLU GLU A . n B 2 175 ARG 175 176 176 ARG ARG A . n B 2 176 GLY 176 177 177 GLY GLY A . n B 2 177 HIS 177 178 178 HIS HIS A . n B 2 178 ARG 178 179 179 ARG ARG A . n B 2 179 GLU 179 180 180 GLU GLU A . n B 2 180 ILE 180 181 181 ILE ILE A . n B 2 181 GLY 181 182 182 GLY GLY A . n B 2 182 VAL 182 183 183 VAL VAL A . n B 2 183 ILE 183 184 184 ILE ILE A . n B 2 184 PRO 184 185 185 PRO PRO A . n B 2 185 GLY 185 186 186 GLY GLY A . n B 2 186 PRO 186 187 187 PRO PRO A . n B 2 187 LEU 187 188 188 LEU LEU A . n B 2 188 GLU 188 189 189 GLU GLU A . n B 2 189 ARG 189 190 190 ARG ARG A . n B 2 190 ASN 190 191 191 ASN ASN A . n B 2 191 THR 191 192 192 THR THR A . n B 2 192 GLY 192 193 193 GLY GLY A . n B 2 193 ALA 193 194 194 ALA ALA A . n B 2 194 GLY 194 195 195 GLY GLY A . n B 2 195 ARG 195 196 196 ARG ARG A . n B 2 196 LEU 196 197 197 LEU LEU A . n B 2 197 ALA 197 198 198 ALA ALA A . n B 2 198 GLY 198 199 199 GLY GLY A . n B 2 199 PHE 199 200 200 PHE PHE A . n B 2 200 MET 200 201 201 MET MET A . n B 2 201 LYS 201 202 202 LYS LYS A . n B 2 202 ALA 202 203 203 ALA ALA A . n B 2 203 MET 203 204 204 MET MET A . n B 2 204 GLU 204 205 205 GLU GLU A . n B 2 205 GLU 205 206 206 GLU GLU A . n B 2 206 ALA 206 207 207 ALA ALA A . n B 2 207 MET 207 208 208 MET MET A . n B 2 208 ILE 208 209 209 ILE ILE A . n B 2 209 LYS 209 210 210 LYS LYS A . n B 2 210 VAL 210 211 211 VAL VAL A . n B 2 211 PRO 211 212 212 PRO PRO A . n B 2 212 GLU 212 213 213 GLU GLU A . n B 2 213 SER 213 214 214 SER SER A . n B 2 214 TRP 214 215 215 TRP TRP A . n B 2 215 ILE 215 216 216 ILE ILE A . n B 2 216 VAL 216 217 217 VAL VAL A . n B 2 217 GLN 217 218 218 GLN GLN A . n B 2 218 GLY 218 219 219 GLY GLY A . n B 2 219 ASP 219 220 220 ASP ASP A . n B 2 220 PHE 220 221 221 PHE PHE A . n B 2 221 GLU 221 222 222 GLU GLU A . n B 2 222 PRO 222 223 223 PRO PRO A . n B 2 223 GLU 223 224 224 GLU GLU A . n B 2 224 SER 224 225 225 SER SER A . n B 2 225 GLY 225 226 226 GLY GLY A . n B 2 226 TYR 226 227 227 TYR TYR A . n B 2 227 ARG 227 228 228 ARG ARG A . n B 2 228 ALA 228 229 229 ALA ALA A . n B 2 229 MET 229 230 230 MET MET A . n B 2 230 GLN 230 231 231 GLN GLN A . n B 2 231 GLN 231 232 232 GLN GLN A . n B 2 232 ILE 232 233 233 ILE ILE A . n B 2 233 LEU 233 234 234 LEU LEU A . n B 2 234 SER 234 235 235 SER SER A . n B 2 235 GLN 235 236 236 GLN GLN A . n B 2 236 PRO 236 237 237 PRO PRO A . n B 2 237 HIS 237 238 238 HIS HIS A . n B 2 238 ARG 238 239 239 ARG ARG A . n B 2 239 PRO 239 240 240 PRO PRO A . n B 2 240 THR 240 241 241 THR THR A . n B 2 241 ALA 241 242 242 ALA ALA A . n B 2 242 VAL 242 243 243 VAL VAL A . n B 2 243 PHE 243 244 244 PHE PHE A . n B 2 244 CYS 244 245 245 CYS CYS A . n B 2 245 GLY 245 246 246 GLY GLY A . n B 2 246 GLY 246 247 247 GLY GLY A . n B 2 247 ASP 247 248 248 ASP ASP A . n B 2 248 ILE 248 249 249 ILE ILE A . n B 2 249 MET 249 250 250 MET MET A . n B 2 250 ALA 250 251 251 ALA ALA A . n B 2 251 MET 251 252 252 MET MET A . n B 2 252 GLY 252 253 253 GLY GLY A . n B 2 253 ALA 253 254 254 ALA ALA A . n B 2 254 LEU 254 255 255 LEU LEU A . n B 2 255 CYS 255 256 256 CYS CYS A . n B 2 256 ALA 256 257 257 ALA ALA A . n B 2 257 ALA 257 258 258 ALA ALA A . n B 2 258 ASP 258 259 259 ASP ASP A . n B 2 259 GLU 259 260 260 GLU GLU A . n B 2 260 MET 260 261 261 MET MET A . n B 2 261 GLY 261 262 262 GLY GLY A . n B 2 262 LEU 262 263 263 LEU LEU A . n B 2 263 ARG 263 264 264 ARG ARG A . n B 2 264 VAL 264 265 265 VAL VAL A . n B 2 265 PRO 265 266 266 PRO PRO A . n B 2 266 GLN 266 267 267 GLN GLN A . n B 2 267 ASP 267 268 268 ASP ASP A . n B 2 268 VAL 268 269 269 VAL VAL A . n B 2 269 SER 269 270 270 SER SER A . n B 2 270 LEU 270 271 271 LEU LEU A . n B 2 271 ILE 271 272 272 ILE ILE A . n B 2 272 GLY 272 273 273 GLY GLY A . n B 2 273 TYR 273 274 274 TYR TYR A . n B 2 274 ASP 274 275 275 ASP ASP A . n B 2 275 ASN 275 276 276 ASN ASN A . n B 2 276 VAL 276 277 277 VAL VAL A . n B 2 277 ARG 277 278 278 ARG ARG A . n B 2 278 ASN 278 279 279 ASN ASN A . n B 2 279 ALA 279 280 280 ALA ALA A . n B 2 280 ARG 280 281 281 ARG ARG A . n B 2 281 TYR 281 282 282 TYR TYR A . n B 2 282 PHE 282 283 283 PHE PHE A . n B 2 283 THR 283 284 284 THR THR A . n B 2 284 PRO 284 285 285 PRO PRO A . n B 2 285 ALA 285 286 286 ALA ALA A . n B 2 286 LEU 286 287 287 LEU LEU A . n B 2 287 THR 287 288 288 THR THR A . n B 2 288 THR 288 289 289 THR THR A . n B 2 289 ILE 289 290 290 ILE ILE A . n B 2 290 HIS 290 291 291 HIS HIS A . n B 2 291 GLN 291 292 292 GLN GLN A . n B 2 292 PRO 292 293 293 PRO PRO A . n B 2 293 LYS 293 294 294 LYS LYS A . n B 2 294 ASP 294 295 295 ASP ASP A . n B 2 295 SER 295 296 296 SER SER A . n B 2 296 LEU 296 297 297 LEU LEU A . n B 2 297 GLY 297 298 298 GLY GLY A . n B 2 298 GLU 298 299 299 GLU GLU A . n B 2 299 THR 299 300 300 THR THR A . n B 2 300 ALA 300 301 301 ALA ALA A . n B 2 301 PHE 301 302 302 PHE PHE A . n B 2 302 ASN 302 303 303 ASN ASN A . n B 2 303 MET 303 304 304 MET MET A . n B 2 304 LEU 304 305 305 LEU LEU A . n B 2 305 LEU 305 306 306 LEU LEU A . n B 2 306 ASP 306 307 307 ASP ASP A . n B 2 307 ARG 307 308 308 ARG ARG A . n B 2 308 ILE 308 309 309 ILE ILE A . n B 2 309 VAL 309 310 310 VAL VAL A . n B 2 310 ASN 310 311 311 ASN ASN A . n B 2 311 LYS 311 312 312 LYS LYS A . n B 2 312 ARG 312 313 313 ARG ARG A . n B 2 313 GLU 313 314 314 GLU GLU A . n B 2 314 GLU 314 315 315 GLU GLU A . n B 2 315 PRO 315 316 316 PRO PRO A . n B 2 316 GLN 316 317 317 GLN GLN A . n B 2 317 SER 317 318 318 SER SER A . n B 2 318 ILE 318 319 319 ILE ILE A . n B 2 319 GLU 319 320 320 GLU GLU A . n B 2 320 VAL 320 321 321 VAL VAL A . n B 2 321 HIS 321 322 322 HIS HIS A . n B 2 322 PRO 322 323 323 PRO PRO A . n B 2 323 ARG 323 324 324 ARG ARG A . n B 2 324 LEU 324 325 325 LEU LEU A . n B 2 325 ILE 325 326 326 ILE ILE A . n B 2 326 GLU 326 327 327 GLU GLU A . n B 2 327 ARG 327 328 328 ARG ARG A . n B 2 328 ARG 328 329 329 ARG ARG A . n B 2 329 SER 329 330 330 SER SER A . n B 2 330 VAL 330 331 331 VAL VAL A . n B 2 331 ALA 331 332 332 ALA ALA A . n B 2 332 ASP 332 333 333 ASP ASP A . n B 2 333 GLY 333 334 334 GLY GLY A . n B 2 334 PRO 334 335 335 PRO PRO A . n B 2 335 PHE 335 336 336 PHE PHE A . n B 2 336 ARG 336 337 337 ARG ARG A . n B 2 337 ASP 337 338 338 ASP ASP A . n B 2 338 TYR 338 339 339 TYR TYR A . n B 2 339 ARG 339 340 340 ARG ARG A . n B 2 340 ARG 340 341 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HPA 1 599 599 HPA HPA A . D 4 HOH 1 801 801 HOH HOH A . D 4 HOH 2 802 802 HOH HOH A . D 4 HOH 3 803 803 HOH HOH A . D 4 HOH 4 804 804 HOH HOH A . D 4 HOH 5 805 805 HOH HOH A . D 4 HOH 6 806 806 HOH HOH A . D 4 HOH 7 807 807 HOH HOH A . D 4 HOH 8 808 808 HOH HOH A . D 4 HOH 9 809 809 HOH HOH A . D 4 HOH 10 810 810 HOH HOH A . D 4 HOH 11 811 811 HOH HOH A . D 4 HOH 12 812 812 HOH HOH A . D 4 HOH 13 813 813 HOH HOH A . D 4 HOH 14 814 814 HOH HOH A . D 4 HOH 15 815 815 HOH HOH A . D 4 HOH 16 816 816 HOH HOH A . D 4 HOH 17 817 817 HOH HOH A . D 4 HOH 18 818 818 HOH HOH A . D 4 HOH 19 819 819 HOH HOH A . D 4 HOH 20 820 820 HOH HOH A . D 4 HOH 21 821 821 HOH HOH A . D 4 HOH 22 822 822 HOH HOH A . D 4 HOH 23 823 823 HOH HOH A . D 4 HOH 24 824 824 HOH HOH A . D 4 HOH 25 825 825 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 1AP _pdbx_struct_mod_residue.label_seq_id 10 _pdbx_struct_mod_residue.auth_asym_id M _pdbx_struct_mod_residue.auth_comp_id 1AP _pdbx_struct_mod_residue.auth_seq_id 708 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DA _pdbx_struct_mod_residue.details '2,6-DIAMINOPURINE NUCLEOTIDE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 811 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-12-16 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_dist_value' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal TNT refinement . ? 1 bioteX 'data reduction' . ? 2 bioteX 'data scaling' . ? 3 TNT phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A GLU 222 ? ? N A PRO 223 ? ? CD A PRO 223 ? ? 108.50 128.40 -19.90 2.10 Y 2 1 C A GLN 236 ? ? N A PRO 237 ? ? CD A PRO 237 ? ? 107.85 128.40 -20.55 2.10 Y 3 1 C A GLU 315 ? ? N A PRO 316 ? ? CD A PRO 316 ? ? 115.70 128.40 -12.70 2.10 Y 4 1 NE A ARG 340 ? ? CZ A ARG 340 ? ? NH2 A ARG 340 ? ? 124.17 120.30 3.87 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 44 ? ? 69.13 78.33 2 1 ASN A 57 ? ? 67.47 63.07 3 1 HIS A 58 ? ? 169.57 138.36 4 1 SER A 124 ? ? 70.28 -71.82 5 1 ARG A 179 ? ? -150.51 -20.48 6 1 PRO A 187 ? ? -37.45 137.77 7 1 PHE A 221 ? ? 80.49 -4.31 8 1 SER A 235 ? ? -76.76 26.38 9 1 PRO A 237 ? ? -28.63 -69.31 10 1 ASP A 275 ? ? 135.49 -49.94 11 1 ASN A 276 ? ? 64.17 62.12 12 1 PRO A 293 ? ? -68.43 91.33 13 1 ASN A 311 ? ? -68.08 18.55 14 1 LYS A 312 ? ? 35.87 42.75 15 1 ARG A 328 ? ? -112.00 -133.38 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 2 ? B ALA 1 2 1 Y 1 A ARG 341 ? B ARG 340 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1AP N1 N Y N 1 1AP C2 C Y N 2 1AP C4 C Y N 3 1AP C5 C Y N 4 1AP C6 C Y N 5 1AP C8 C Y N 6 1AP N2 N N N 7 1AP N3 N Y N 8 1AP N9 N Y N 9 1AP N7 N Y N 10 1AP N6 N N N 11 1AP P P N N 12 1AP OP1 O N N 13 1AP OP2 O N N 14 1AP "O5'" O N N 15 1AP "C5'" C N N 16 1AP "C4'" C N R 17 1AP "O4'" O N N 18 1AP "C1'" C N R 19 1AP "C2'" C N N 20 1AP "C3'" C N S 21 1AP "O3'" O N N 22 1AP OP3 O N N 23 1AP H81 H N N 24 1AP HN21 H N N 25 1AP HN22 H N N 26 1AP HN61 H N N 27 1AP HN62 H N N 28 1AP H1P H N N 29 1AP H52 H N N 30 1AP H51 H N N 31 1AP H4 H N N 32 1AP H11 H N N 33 1AP H21 H N N 34 1AP H22 H N N 35 1AP H31 H N N 36 1AP HO31 H N N 37 1AP H3P H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 DA OP3 O N N 126 DA P P N N 127 DA OP1 O N N 128 DA OP2 O N N 129 DA "O5'" O N N 130 DA "C5'" C N N 131 DA "C4'" C N R 132 DA "O4'" O N N 133 DA "C3'" C N S 134 DA "O3'" O N N 135 DA "C2'" C N N 136 DA "C1'" C N R 137 DA N9 N Y N 138 DA C8 C Y N 139 DA N7 N Y N 140 DA C5 C Y N 141 DA C6 C Y N 142 DA N6 N N N 143 DA N1 N Y N 144 DA C2 C Y N 145 DA N3 N Y N 146 DA C4 C Y N 147 DA HOP3 H N N 148 DA HOP2 H N N 149 DA "H5'" H N N 150 DA "H5''" H N N 151 DA "H4'" H N N 152 DA "H3'" H N N 153 DA "HO3'" H N N 154 DA "H2'" H N N 155 DA "H2''" H N N 156 DA "H1'" H N N 157 DA H8 H N N 158 DA H61 H N N 159 DA H62 H N N 160 DA H2 H N N 161 DC OP3 O N N 162 DC P P N N 163 DC OP1 O N N 164 DC OP2 O N N 165 DC "O5'" O N N 166 DC "C5'" C N N 167 DC "C4'" C N R 168 DC "O4'" O N N 169 DC "C3'" C N S 170 DC "O3'" O N N 171 DC "C2'" C N N 172 DC "C1'" C N R 173 DC N1 N N N 174 DC C2 C N N 175 DC O2 O N N 176 DC N3 N N N 177 DC C4 C N N 178 DC N4 N N N 179 DC C5 C N N 180 DC C6 C N N 181 DC HOP3 H N N 182 DC HOP2 H N N 183 DC "H5'" H N N 184 DC "H5''" H N N 185 DC "H4'" H N N 186 DC "H3'" H N N 187 DC "HO3'" H N N 188 DC "H2'" H N N 189 DC "H2''" H N N 190 DC "H1'" H N N 191 DC H41 H N N 192 DC H42 H N N 193 DC H5 H N N 194 DC H6 H N N 195 DG OP3 O N N 196 DG P P N N 197 DG OP1 O N N 198 DG OP2 O N N 199 DG "O5'" O N N 200 DG "C5'" C N N 201 DG "C4'" C N R 202 DG "O4'" O N N 203 DG "C3'" C N S 204 DG "O3'" O N N 205 DG "C2'" C N N 206 DG "C1'" C N R 207 DG N9 N Y N 208 DG C8 C Y N 209 DG N7 N Y N 210 DG C5 C Y N 211 DG C6 C N N 212 DG O6 O N N 213 DG N1 N N N 214 DG C2 C N N 215 DG N2 N N N 216 DG N3 N N N 217 DG C4 C Y N 218 DG HOP3 H N N 219 DG HOP2 H N N 220 DG "H5'" H N N 221 DG "H5''" H N N 222 DG "H4'" H N N 223 DG "H3'" H N N 224 DG "HO3'" H N N 225 DG "H2'" H N N 226 DG "H2''" H N N 227 DG "H1'" H N N 228 DG H8 H N N 229 DG H1 H N N 230 DG H21 H N N 231 DG H22 H N N 232 DT OP3 O N N 233 DT P P N N 234 DT OP1 O N N 235 DT OP2 O N N 236 DT "O5'" O N N 237 DT "C5'" C N N 238 DT "C4'" C N R 239 DT "O4'" O N N 240 DT "C3'" C N S 241 DT "O3'" O N N 242 DT "C2'" C N N 243 DT "C1'" C N R 244 DT N1 N N N 245 DT C2 C N N 246 DT O2 O N N 247 DT N3 N N N 248 DT C4 C N N 249 DT O4 O N N 250 DT C5 C N N 251 DT C7 C N N 252 DT C6 C N N 253 DT HOP3 H N N 254 DT HOP2 H N N 255 DT "H5'" H N N 256 DT "H5''" H N N 257 DT "H4'" H N N 258 DT "H3'" H N N 259 DT "HO3'" H N N 260 DT "H2'" H N N 261 DT "H2''" H N N 262 DT "H1'" H N N 263 DT H3 H N N 264 DT H71 H N N 265 DT H72 H N N 266 DT H73 H N N 267 DT H6 H N N 268 GLN N N N N 269 GLN CA C N S 270 GLN C C N N 271 GLN O O N N 272 GLN CB C N N 273 GLN CG C N N 274 GLN CD C N N 275 GLN OE1 O N N 276 GLN NE2 N N N 277 GLN OXT O N N 278 GLN H H N N 279 GLN H2 H N N 280 GLN HA H N N 281 GLN HB2 H N N 282 GLN HB3 H N N 283 GLN HG2 H N N 284 GLN HG3 H N N 285 GLN HE21 H N N 286 GLN HE22 H N N 287 GLN HXT H N N 288 GLU N N N N 289 GLU CA C N S 290 GLU C C N N 291 GLU O O N N 292 GLU CB C N N 293 GLU CG C N N 294 GLU CD C N N 295 GLU OE1 O N N 296 GLU OE2 O N N 297 GLU OXT O N N 298 GLU H H N N 299 GLU H2 H N N 300 GLU HA H N N 301 GLU HB2 H N N 302 GLU HB3 H N N 303 GLU HG2 H N N 304 GLU HG3 H N N 305 GLU HE2 H N N 306 GLU HXT H N N 307 GLY N N N N 308 GLY CA C N N 309 GLY C C N N 310 GLY O O N N 311 GLY OXT O N N 312 GLY H H N N 313 GLY H2 H N N 314 GLY HA2 H N N 315 GLY HA3 H N N 316 GLY HXT H N N 317 HIS N N N N 318 HIS CA C N S 319 HIS C C N N 320 HIS O O N N 321 HIS CB C N N 322 HIS CG C Y N 323 HIS ND1 N Y N 324 HIS CD2 C Y N 325 HIS CE1 C Y N 326 HIS NE2 N Y N 327 HIS OXT O N N 328 HIS H H N N 329 HIS H2 H N N 330 HIS HA H N N 331 HIS HB2 H N N 332 HIS HB3 H N N 333 HIS HD1 H N N 334 HIS HD2 H N N 335 HIS HE1 H N N 336 HIS HE2 H N N 337 HIS HXT H N N 338 HOH O O N N 339 HOH H1 H N N 340 HOH H2 H N N 341 HPA N1 N Y N 342 HPA C2 C Y N 343 HPA N3 N Y N 344 HPA C4 C Y N 345 HPA C5 C Y N 346 HPA C6 C Y N 347 HPA O6 O N N 348 HPA N7 N Y N 349 HPA C8 C Y N 350 HPA N9 N Y N 351 HPA HN1 H N N 352 HPA H2 H N N 353 HPA HN7 H N N 354 HPA H8 H N N 355 ILE N N N N 356 ILE CA C N S 357 ILE C C N N 358 ILE O O N N 359 ILE CB C N S 360 ILE CG1 C N N 361 ILE CG2 C N N 362 ILE CD1 C N N 363 ILE OXT O N N 364 ILE H H N N 365 ILE H2 H N N 366 ILE HA H N N 367 ILE HB H N N 368 ILE HG12 H N N 369 ILE HG13 H N N 370 ILE HG21 H N N 371 ILE HG22 H N N 372 ILE HG23 H N N 373 ILE HD11 H N N 374 ILE HD12 H N N 375 ILE HD13 H N N 376 ILE HXT H N N 377 LEU N N N N 378 LEU CA C N S 379 LEU C C N N 380 LEU O O N N 381 LEU CB C N N 382 LEU CG C N N 383 LEU CD1 C N N 384 LEU CD2 C N N 385 LEU OXT O N N 386 LEU H H N N 387 LEU H2 H N N 388 LEU HA H N N 389 LEU HB2 H N N 390 LEU HB3 H N N 391 LEU HG H N N 392 LEU HD11 H N N 393 LEU HD12 H N N 394 LEU HD13 H N N 395 LEU HD21 H N N 396 LEU HD22 H N N 397 LEU HD23 H N N 398 LEU HXT H N N 399 LYS N N N N 400 LYS CA C N S 401 LYS C C N N 402 LYS O O N N 403 LYS CB C N N 404 LYS CG C N N 405 LYS CD C N N 406 LYS CE C N N 407 LYS NZ N N N 408 LYS OXT O N N 409 LYS H H N N 410 LYS H2 H N N 411 LYS HA H N N 412 LYS HB2 H N N 413 LYS HB3 H N N 414 LYS HG2 H N N 415 LYS HG3 H N N 416 LYS HD2 H N N 417 LYS HD3 H N N 418 LYS HE2 H N N 419 LYS HE3 H N N 420 LYS HZ1 H N N 421 LYS HZ2 H N N 422 LYS HZ3 H N N 423 LYS HXT H N N 424 MET N N N N 425 MET CA C N S 426 MET C C N N 427 MET O O N N 428 MET CB C N N 429 MET CG C N N 430 MET SD S N N 431 MET CE C N N 432 MET OXT O N N 433 MET H H N N 434 MET H2 H N N 435 MET HA H N N 436 MET HB2 H N N 437 MET HB3 H N N 438 MET HG2 H N N 439 MET HG3 H N N 440 MET HE1 H N N 441 MET HE2 H N N 442 MET HE3 H N N 443 MET HXT H N N 444 PHE N N N N 445 PHE CA C N S 446 PHE C C N N 447 PHE O O N N 448 PHE CB C N N 449 PHE CG C Y N 450 PHE CD1 C Y N 451 PHE CD2 C Y N 452 PHE CE1 C Y N 453 PHE CE2 C Y N 454 PHE CZ C Y N 455 PHE OXT O N N 456 PHE H H N N 457 PHE H2 H N N 458 PHE HA H N N 459 PHE HB2 H N N 460 PHE HB3 H N N 461 PHE HD1 H N N 462 PHE HD2 H N N 463 PHE HE1 H N N 464 PHE HE2 H N N 465 PHE HZ H N N 466 PHE HXT H N N 467 PRO N N N N 468 PRO CA C N S 469 PRO C C N N 470 PRO O O N N 471 PRO CB C N N 472 PRO CG C N N 473 PRO CD C N N 474 PRO OXT O N N 475 PRO H H N N 476 PRO HA H N N 477 PRO HB2 H N N 478 PRO HB3 H N N 479 PRO HG2 H N N 480 PRO HG3 H N N 481 PRO HD2 H N N 482 PRO HD3 H N N 483 PRO HXT H N N 484 SER N N N N 485 SER CA C N S 486 SER C C N N 487 SER O O N N 488 SER CB C N N 489 SER OG O N N 490 SER OXT O N N 491 SER H H N N 492 SER H2 H N N 493 SER HA H N N 494 SER HB2 H N N 495 SER HB3 H N N 496 SER HG H N N 497 SER HXT H N N 498 THR N N N N 499 THR CA C N S 500 THR C C N N 501 THR O O N N 502 THR CB C N R 503 THR OG1 O N N 504 THR CG2 C N N 505 THR OXT O N N 506 THR H H N N 507 THR H2 H N N 508 THR HA H N N 509 THR HB H N N 510 THR HG1 H N N 511 THR HG21 H N N 512 THR HG22 H N N 513 THR HG23 H N N 514 THR HXT H N N 515 TRP N N N N 516 TRP CA C N S 517 TRP C C N N 518 TRP O O N N 519 TRP CB C N N 520 TRP CG C Y N 521 TRP CD1 C Y N 522 TRP CD2 C Y N 523 TRP NE1 N Y N 524 TRP CE2 C Y N 525 TRP CE3 C Y N 526 TRP CZ2 C Y N 527 TRP CZ3 C Y N 528 TRP CH2 C Y N 529 TRP OXT O N N 530 TRP H H N N 531 TRP H2 H N N 532 TRP HA H N N 533 TRP HB2 H N N 534 TRP HB3 H N N 535 TRP HD1 H N N 536 TRP HE1 H N N 537 TRP HE3 H N N 538 TRP HZ2 H N N 539 TRP HZ3 H N N 540 TRP HH2 H N N 541 TRP HXT H N N 542 TYR N N N N 543 TYR CA C N S 544 TYR C C N N 545 TYR O O N N 546 TYR CB C N N 547 TYR CG C Y N 548 TYR CD1 C Y N 549 TYR CD2 C Y N 550 TYR CE1 C Y N 551 TYR CE2 C Y N 552 TYR CZ C Y N 553 TYR OH O N N 554 TYR OXT O N N 555 TYR H H N N 556 TYR H2 H N N 557 TYR HA H N N 558 TYR HB2 H N N 559 TYR HB3 H N N 560 TYR HD1 H N N 561 TYR HD2 H N N 562 TYR HE1 H N N 563 TYR HE2 H N N 564 TYR HH H N N 565 TYR HXT H N N 566 VAL N N N N 567 VAL CA C N S 568 VAL C C N N 569 VAL O O N N 570 VAL CB C N N 571 VAL CG1 C N N 572 VAL CG2 C N N 573 VAL OXT O N N 574 VAL H H N N 575 VAL H2 H N N 576 VAL HA H N N 577 VAL HB H N N 578 VAL HG11 H N N 579 VAL HG12 H N N 580 VAL HG13 H N N 581 VAL HG21 H N N 582 VAL HG22 H N N 583 VAL HG23 H N N 584 VAL HXT H N N 585 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1AP N1 C2 sing Y N 1 1AP N1 C6 doub Y N 2 1AP C2 N2 sing N N 3 1AP C2 N3 doub Y N 4 1AP C4 C5 doub Y N 5 1AP C4 N3 sing Y N 6 1AP C4 N9 sing Y N 7 1AP C5 C6 sing Y N 8 1AP C5 N7 sing Y N 9 1AP C6 N6 sing N N 10 1AP C8 N9 sing Y N 11 1AP C8 N7 doub Y N 12 1AP C8 H81 sing N N 13 1AP N2 HN21 sing N N 14 1AP N2 HN22 sing N N 15 1AP N9 "C1'" sing N N 16 1AP N6 HN61 sing N N 17 1AP N6 HN62 sing N N 18 1AP P OP1 sing N N 19 1AP P OP2 doub N N 20 1AP P "O5'" sing N N 21 1AP P OP3 sing N N 22 1AP OP1 H1P sing N N 23 1AP "O5'" "C5'" sing N N 24 1AP "C5'" "C4'" sing N N 25 1AP "C5'" H52 sing N N 26 1AP "C5'" H51 sing N N 27 1AP "C4'" "O4'" sing N N 28 1AP "C4'" "C3'" sing N N 29 1AP "C4'" H4 sing N N 30 1AP "O4'" "C1'" sing N N 31 1AP "C1'" "C2'" sing N N 32 1AP "C1'" H11 sing N N 33 1AP "C2'" "C3'" sing N N 34 1AP "C2'" H21 sing N N 35 1AP "C2'" H22 sing N N 36 1AP "C3'" "O3'" sing N N 37 1AP "C3'" H31 sing N N 38 1AP "O3'" HO31 sing N N 39 1AP OP3 H3P sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 HPA N1 C2 sing Y N 341 HPA N1 C6 sing Y N 342 HPA N1 HN1 sing N N 343 HPA C2 N3 doub Y N 344 HPA C2 H2 sing N N 345 HPA N3 C4 sing Y N 346 HPA C4 C5 doub Y N 347 HPA C4 N9 sing Y N 348 HPA C5 C6 sing Y N 349 HPA C5 N7 sing Y N 350 HPA C6 O6 doub N N 351 HPA N7 C8 sing Y N 352 HPA N7 HN7 sing N N 353 HPA C8 N9 doub Y N 354 HPA C8 H8 sing N N 355 ILE N CA sing N N 356 ILE N H sing N N 357 ILE N H2 sing N N 358 ILE CA C sing N N 359 ILE CA CB sing N N 360 ILE CA HA sing N N 361 ILE C O doub N N 362 ILE C OXT sing N N 363 ILE CB CG1 sing N N 364 ILE CB CG2 sing N N 365 ILE CB HB sing N N 366 ILE CG1 CD1 sing N N 367 ILE CG1 HG12 sing N N 368 ILE CG1 HG13 sing N N 369 ILE CG2 HG21 sing N N 370 ILE CG2 HG22 sing N N 371 ILE CG2 HG23 sing N N 372 ILE CD1 HD11 sing N N 373 ILE CD1 HD12 sing N N 374 ILE CD1 HD13 sing N N 375 ILE OXT HXT sing N N 376 LEU N CA sing N N 377 LEU N H sing N N 378 LEU N H2 sing N N 379 LEU CA C sing N N 380 LEU CA CB sing N N 381 LEU CA HA sing N N 382 LEU C O doub N N 383 LEU C OXT sing N N 384 LEU CB CG sing N N 385 LEU CB HB2 sing N N 386 LEU CB HB3 sing N N 387 LEU CG CD1 sing N N 388 LEU CG CD2 sing N N 389 LEU CG HG sing N N 390 LEU CD1 HD11 sing N N 391 LEU CD1 HD12 sing N N 392 LEU CD1 HD13 sing N N 393 LEU CD2 HD21 sing N N 394 LEU CD2 HD22 sing N N 395 LEU CD2 HD23 sing N N 396 LEU OXT HXT sing N N 397 LYS N CA sing N N 398 LYS N H sing N N 399 LYS N H2 sing N N 400 LYS CA C sing N N 401 LYS CA CB sing N N 402 LYS CA HA sing N N 403 LYS C O doub N N 404 LYS C OXT sing N N 405 LYS CB CG sing N N 406 LYS CB HB2 sing N N 407 LYS CB HB3 sing N N 408 LYS CG CD sing N N 409 LYS CG HG2 sing N N 410 LYS CG HG3 sing N N 411 LYS CD CE sing N N 412 LYS CD HD2 sing N N 413 LYS CD HD3 sing N N 414 LYS CE NZ sing N N 415 LYS CE HE2 sing N N 416 LYS CE HE3 sing N N 417 LYS NZ HZ1 sing N N 418 LYS NZ HZ2 sing N N 419 LYS NZ HZ3 sing N N 420 LYS OXT HXT sing N N 421 MET N CA sing N N 422 MET N H sing N N 423 MET N H2 sing N N 424 MET CA C sing N N 425 MET CA CB sing N N 426 MET CA HA sing N N 427 MET C O doub N N 428 MET C OXT sing N N 429 MET CB CG sing N N 430 MET CB HB2 sing N N 431 MET CB HB3 sing N N 432 MET CG SD sing N N 433 MET CG HG2 sing N N 434 MET CG HG3 sing N N 435 MET SD CE sing N N 436 MET CE HE1 sing N N 437 MET CE HE2 sing N N 438 MET CE HE3 sing N N 439 MET OXT HXT sing N N 440 PHE N CA sing N N 441 PHE N H sing N N 442 PHE N H2 sing N N 443 PHE CA C sing N N 444 PHE CA CB sing N N 445 PHE CA HA sing N N 446 PHE C O doub N N 447 PHE C OXT sing N N 448 PHE CB CG sing N N 449 PHE CB HB2 sing N N 450 PHE CB HB3 sing N N 451 PHE CG CD1 doub Y N 452 PHE CG CD2 sing Y N 453 PHE CD1 CE1 sing Y N 454 PHE CD1 HD1 sing N N 455 PHE CD2 CE2 doub Y N 456 PHE CD2 HD2 sing N N 457 PHE CE1 CZ doub Y N 458 PHE CE1 HE1 sing N N 459 PHE CE2 CZ sing Y N 460 PHE CE2 HE2 sing N N 461 PHE CZ HZ sing N N 462 PHE OXT HXT sing N N 463 PRO N CA sing N N 464 PRO N CD sing N N 465 PRO N H sing N N 466 PRO CA C sing N N 467 PRO CA CB sing N N 468 PRO CA HA sing N N 469 PRO C O doub N N 470 PRO C OXT sing N N 471 PRO CB CG sing N N 472 PRO CB HB2 sing N N 473 PRO CB HB3 sing N N 474 PRO CG CD sing N N 475 PRO CG HG2 sing N N 476 PRO CG HG3 sing N N 477 PRO CD HD2 sing N N 478 PRO CD HD3 sing N N 479 PRO OXT HXT sing N N 480 SER N CA sing N N 481 SER N H sing N N 482 SER N H2 sing N N 483 SER CA C sing N N 484 SER CA CB sing N N 485 SER CA HA sing N N 486 SER C O doub N N 487 SER C OXT sing N N 488 SER CB OG sing N N 489 SER CB HB2 sing N N 490 SER CB HB3 sing N N 491 SER OG HG sing N N 492 SER OXT HXT sing N N 493 THR N CA sing N N 494 THR N H sing N N 495 THR N H2 sing N N 496 THR CA C sing N N 497 THR CA CB sing N N 498 THR CA HA sing N N 499 THR C O doub N N 500 THR C OXT sing N N 501 THR CB OG1 sing N N 502 THR CB CG2 sing N N 503 THR CB HB sing N N 504 THR OG1 HG1 sing N N 505 THR CG2 HG21 sing N N 506 THR CG2 HG22 sing N N 507 THR CG2 HG23 sing N N 508 THR OXT HXT sing N N 509 TRP N CA sing N N 510 TRP N H sing N N 511 TRP N H2 sing N N 512 TRP CA C sing N N 513 TRP CA CB sing N N 514 TRP CA HA sing N N 515 TRP C O doub N N 516 TRP C OXT sing N N 517 TRP CB CG sing N N 518 TRP CB HB2 sing N N 519 TRP CB HB3 sing N N 520 TRP CG CD1 doub Y N 521 TRP CG CD2 sing Y N 522 TRP CD1 NE1 sing Y N 523 TRP CD1 HD1 sing N N 524 TRP CD2 CE2 doub Y N 525 TRP CD2 CE3 sing Y N 526 TRP NE1 CE2 sing Y N 527 TRP NE1 HE1 sing N N 528 TRP CE2 CZ2 sing Y N 529 TRP CE3 CZ3 doub Y N 530 TRP CE3 HE3 sing N N 531 TRP CZ2 CH2 doub Y N 532 TRP CZ2 HZ2 sing N N 533 TRP CZ3 CH2 sing Y N 534 TRP CZ3 HZ3 sing N N 535 TRP CH2 HH2 sing N N 536 TRP OXT HXT sing N N 537 TYR N CA sing N N 538 TYR N H sing N N 539 TYR N H2 sing N N 540 TYR CA C sing N N 541 TYR CA CB sing N N 542 TYR CA HA sing N N 543 TYR C O doub N N 544 TYR C OXT sing N N 545 TYR CB CG sing N N 546 TYR CB HB2 sing N N 547 TYR CB HB3 sing N N 548 TYR CG CD1 doub Y N 549 TYR CG CD2 sing Y N 550 TYR CD1 CE1 sing Y N 551 TYR CD1 HD1 sing N N 552 TYR CD2 CE2 doub Y N 553 TYR CD2 HD2 sing N N 554 TYR CE1 CZ doub Y N 555 TYR CE1 HE1 sing N N 556 TYR CE2 CZ sing Y N 557 TYR CE2 HE2 sing N N 558 TYR CZ OH sing N N 559 TYR OH HH sing N N 560 TYR OXT HXT sing N N 561 VAL N CA sing N N 562 VAL N H sing N N 563 VAL N H2 sing N N 564 VAL CA C sing N N 565 VAL CA CB sing N N 566 VAL CA HA sing N N 567 VAL C O doub N N 568 VAL C OXT sing N N 569 VAL CB CG1 sing N N 570 VAL CB CG2 sing N N 571 VAL CB HB sing N N 572 VAL CG1 HG11 sing N N 573 VAL CG1 HG12 sing N N 574 VAL CG1 HG13 sing N N 575 VAL CG2 HG21 sing N N 576 VAL CG2 HG22 sing N N 577 VAL CG2 HG23 sing N N 578 VAL OXT HXT sing N N 579 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1ZAY 'double helix' 1ZAY 'b-form double helix' 1ZAY 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 A DT 17 4_555 -0.321 0.200 -0.689 -21.123 4.979 -2.851 1 M_DA700:DT715_M M 700 ? M 715 ? 20 1 1 A DC 3 1_555 A DG 16 4_555 0.024 0.122 0.081 8.005 -13.469 8.173 2 M_DC701:DG714_M M 701 ? M 714 ? 19 1 1 A DG 4 1_555 A DC 15 4_555 0.446 -0.340 -0.162 0.101 1.077 -2.153 3 M_DG702:DC713_M M 702 ? M 713 ? 19 1 1 A DA 5 1_555 A DT 14 4_555 0.366 -0.383 -0.448 1.383 -24.263 1.365 4 M_DA703:DT712_M M 703 ? M 712 ? 20 1 1 A DA 6 1_555 A DT 13 4_555 -0.171 0.021 0.198 7.947 -5.886 4.801 5 M_DA704:DT711_M M 704 ? M 711 ? 20 1 1 A DA 7 1_555 A DT 12 4_555 0.400 0.026 0.290 8.460 -18.651 4.158 6 M_DA705:DT710_M M 705 ? M 710 ? 20 1 1 A DA 8 1_555 A DT 11 4_555 0.859 -0.330 0.656 16.999 -15.148 2.120 7 M_DA706:DT709_M M 706 ? M 709 ? 20 1 1 A DT 9 1_555 A 1AP 10 4_555 -0.432 -0.246 -0.376 12.411 -1.950 -7.295 8 M_DT707:1AP708_M M 707 ? M 708 ? ? 1 1 A 1AP 10 1_555 A DT 9 4_555 0.432 -0.246 -0.376 -12.411 -1.950 -7.295 9 M_1AP708:DT707_M M 708 ? M 707 ? ? 1 1 A DT 11 1_555 A DA 8 4_555 -0.859 -0.330 0.656 -16.999 -15.148 2.120 10 M_DT709:DA706_M M 709 ? M 706 ? 20 1 1 A DT 12 1_555 A DA 7 4_555 -0.400 0.026 0.290 -8.460 -18.651 4.158 11 M_DT710:DA705_M M 710 ? M 705 ? 20 1 1 A DT 13 1_555 A DA 6 4_555 0.171 0.021 0.198 -7.947 -5.886 4.801 12 M_DT711:DA704_M M 711 ? M 704 ? 20 1 1 A DT 14 1_555 A DA 5 4_555 -0.366 -0.383 -0.448 -1.383 -24.263 1.365 13 M_DT712:DA703_M M 712 ? M 703 ? 20 1 1 A DC 15 1_555 A DG 4 4_555 -0.446 -0.340 -0.162 -0.101 1.077 -2.153 14 M_DC713:DG702_M M 713 ? M 702 ? 19 1 1 A DG 16 1_555 A DC 3 4_555 -0.024 0.122 0.081 -8.005 -13.469 8.173 15 M_DG714:DC701_M M 714 ? M 701 ? 19 1 1 A DT 17 1_555 A DA 2 4_555 0.321 0.200 -0.689 21.123 4.979 -2.851 16 M_DT715:DA700_M M 715 ? M 700 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 A DT 17 4_555 A DC 3 1_555 A DG 16 4_555 0.205 -0.640 2.713 -8.501 7.500 23.214 -3.090 -2.337 2.195 17.371 19.689 25.800 1 MM_DA700DC701:DG714DT715_MM M 700 ? M 715 ? M 701 ? M 714 ? 1 A DC 3 1_555 A DG 16 4_555 A DG 4 1_555 A DC 15 4_555 -1.361 -0.171 3.787 0.172 -4.466 38.753 0.369 2.062 3.777 -6.703 -0.257 39.000 2 MM_DC701DG702:DC713DG714_MM M 701 ? M 714 ? M 702 ? M 713 ? 1 A DG 4 1_555 A DC 15 4_555 A DA 5 1_555 A DT 14 4_555 -1.026 0.793 3.451 2.096 2.737 35.116 0.881 2.021 3.436 4.522 -3.463 35.280 3 MM_DG702DA703:DT712DC713_MM M 702 ? M 713 ? M 703 ? M 712 ? 1 A DA 5 1_555 A DT 14 4_555 A DA 6 1_555 A DT 13 4_555 1.127 0.461 3.164 -4.423 1.196 31.369 0.636 -2.834 2.996 2.197 8.126 31.694 4 MM_DA703DA704:DT711DT712_MM M 703 ? M 712 ? M 704 ? M 711 ? 1 A DA 6 1_555 A DT 13 4_555 A DA 7 1_555 A DT 12 4_555 -0.420 0.449 3.407 -0.350 0.877 38.783 0.564 0.588 3.420 1.320 0.528 38.794 5 MM_DA704DA705:DT710DT711_MM M 704 ? M 711 ? M 705 ? M 710 ? 1 A DA 7 1_555 A DT 12 4_555 A DA 8 1_555 A DT 11 4_555 0.282 -0.514 3.179 -6.792 3.787 36.811 -1.270 -1.285 3.016 5.915 10.610 37.596 6 MM_DA705DA706:DT709DT710_MM M 705 ? M 710 ? M 706 ? M 709 ? 1 A DA 8 1_555 A DT 11 4_555 A DT 9 1_555 A 1AP 10 4_555 -0.778 -0.614 3.688 6.394 0.603 25.296 -1.541 3.638 3.377 1.349 -14.308 26.086 7 MM_DA706DT707:1AP708DT709_MM M 706 ? M 709 ? M 707 ? M 708 ? 1 A DT 9 1_555 A 1AP 10 4_555 A 1AP 10 1_555 A DT 9 4_555 0.000 1.260 5.194 0.000 43.437 21.635 -4.935 0.000 3.502 64.770 0.000 48.292 8 MM_DT7071AP708:DT7071AP708_MM M 707 ? M 708 ? M 708 ? M 707 ? 1 A 1AP 10 1_555 A DT 9 4_555 A DT 11 1_555 A DA 8 4_555 0.778 -0.614 3.688 -6.394 0.603 25.296 -1.541 -3.638 3.377 1.349 14.308 26.086 9 MM_1AP708DT709:DA706DT707_MM M 708 ? M 707 ? M 709 ? M 706 ? 1 A DT 11 1_555 A DA 8 4_555 A DT 12 1_555 A DA 7 4_555 -0.282 -0.514 3.179 6.792 3.787 36.811 -1.270 1.285 3.016 5.915 -10.610 37.596 10 MM_DT709DT710:DA705DA706_MM M 709 ? M 706 ? M 710 ? M 705 ? 1 A DT 12 1_555 A DA 7 4_555 A DT 13 1_555 A DA 6 4_555 0.420 0.449 3.407 0.350 0.877 38.783 0.564 -0.588 3.420 1.320 -0.528 38.794 11 MM_DT710DT711:DA704DA705_MM M 710 ? M 705 ? M 711 ? M 704 ? 1 A DT 13 1_555 A DA 6 4_555 A DT 14 1_555 A DA 5 4_555 -1.127 0.461 3.164 4.423 1.196 31.369 0.636 2.834 2.996 2.197 -8.126 31.694 12 MM_DT711DT712:DA703DA704_MM M 711 ? M 704 ? M 712 ? M 703 ? 1 A DT 14 1_555 A DA 5 4_555 A DC 15 1_555 A DG 4 4_555 1.026 0.793 3.451 -2.096 2.737 35.116 0.881 -2.021 3.436 4.522 3.463 35.280 13 MM_DT712DC713:DG702DA703_MM M 712 ? M 703 ? M 713 ? M 702 ? 1 A DC 15 1_555 A DG 4 4_555 A DG 16 1_555 A DC 3 4_555 1.361 -0.171 3.787 -0.171 -4.466 38.753 0.369 -2.062 3.777 -6.703 0.257 39.000 14 MM_DC713DG714:DC701DG702_MM M 713 ? M 702 ? M 714 ? M 701 ? 1 A DG 16 1_555 A DC 3 4_555 A DT 17 1_555 A DA 2 4_555 -0.205 -0.640 2.713 8.501 7.500 23.214 -3.090 2.337 2.195 17.371 -19.689 25.800 15 MM_DG714DT715:DA700DC701_MM M 714 ? M 701 ? M 715 ? M 700 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 HYPOXANTHINE HPA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PNR _pdbx_initial_refinement_model.details 'PDB ENTRY 1PNR' #