data_1ZBP # _entry.id 1ZBP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1ZBP RCSB RCSB032538 WWPDB D_1000032538 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id VpR44 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZBP _pdbx_database_status.recvd_initial_deposition_date 2005-04-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Forouhar, F.' 1 'Yong, W.' 2 'Vorobiev, S.M.' 3 'Ciao, M.' 4 'Acton, T.B.' 5 'Montelione, G.T.' 6 'Hunt, J.F.' 7 'Tong, L.' 8 'Northeast Structural Genomics Consortium (NESG)' 9 # _citation.id primary _citation.title 'Functional insights from structural genomics.' _citation.journal_abbrev J.STRUCT.FUNCT.GENOM. _citation.journal_volume 8 _citation.page_first 37 _citation.page_last 44 _citation.year 2007 _citation.journal_id_ASTM ? _citation.country NE _citation.journal_id_ISSN 1345-711X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17588214 _citation.pdbx_database_id_DOI 10.1007/s10969-007-9018-3 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Forouhar, F.' 1 primary 'Kuzin, A.' 2 primary 'Seetharaman, J.' 3 primary 'Lee, I.' 4 primary 'Zhou, W.' 5 primary 'Abashidze, M.' 6 primary 'Chen, Y.' 7 primary 'Yong, W.' 8 primary 'Janjua, H.' 9 primary 'Fang, Y.' 10 primary 'Wang, D.' 11 primary 'Cunningham, K.' 12 primary 'Xiao, R.' 13 primary 'Acton, T.B.' 14 primary 'Pichersky, E.' 15 primary 'Klessig, D.F.' 16 primary 'Porter, C.W.' 17 primary 'Montelione, G.T.' 18 primary 'Tong, L.' 19 # _cell.entry_id 1ZBP _cell.length_a 97.407 _cell.length_b 97.407 _cell.length_c 104.994 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZBP _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein VPA1032' 30829.947 1 ? ? ? ? 2 water nat water 18.015 44 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MTQWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQL(MSE)QSIKLFPEYLPGASQLRHLVK AAQARKDFAQGAATAKVLGENEELTKSLVSFNLS(MSE)VSQDYEQVSELALQIEELRQEKGFLANDTSFSDVRDIDDRL GGYIELFSTAGNYFLVPIASINTLEIKSATSLLESVWRPVEFDIDGLGEGEGH(MSE)P(MSE)TYVDSESDAQKLGRET DWKQIADKEVYLGLGLKCWLVGE(MSE)ALPISDLQNLQVIKELALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MTQWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQA RKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLANDTSFSDVRDIDDRLGGYIELFS TAGNYFLVPIASINTLEIKSATSLLESVWRPVEFDIDGLGEGEGHMPMTYVDSESDAQKLGRETDWKQIADKEVYLGLGL KCWLVGEMALPISDLQNLQVIKELALEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier VpR44 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLN n 1 4 TRP n 1 5 LYS n 1 6 ASN n 1 7 ALA n 1 8 LEU n 1 9 SER n 1 10 GLU n 1 11 GLY n 1 12 GLN n 1 13 LEU n 1 14 GLN n 1 15 GLN n 1 16 ALA n 1 17 LEU n 1 18 GLU n 1 19 LEU n 1 20 LEU n 1 21 ILE n 1 22 GLU n 1 23 ALA n 1 24 ILE n 1 25 LYS n 1 26 ALA n 1 27 SER n 1 28 PRO n 1 29 LYS n 1 30 ASP n 1 31 ALA n 1 32 SER n 1 33 LEU n 1 34 ARG n 1 35 SER n 1 36 SER n 1 37 PHE n 1 38 ILE n 1 39 GLU n 1 40 LEU n 1 41 LEU n 1 42 CYS n 1 43 ILE n 1 44 ASP n 1 45 GLY n 1 46 ASP n 1 47 PHE n 1 48 GLU n 1 49 ARG n 1 50 ALA n 1 51 ASP n 1 52 GLU n 1 53 GLN n 1 54 LEU n 1 55 MSE n 1 56 GLN n 1 57 SER n 1 58 ILE n 1 59 LYS n 1 60 LEU n 1 61 PHE n 1 62 PRO n 1 63 GLU n 1 64 TYR n 1 65 LEU n 1 66 PRO n 1 67 GLY n 1 68 ALA n 1 69 SER n 1 70 GLN n 1 71 LEU n 1 72 ARG n 1 73 HIS n 1 74 LEU n 1 75 VAL n 1 76 LYS n 1 77 ALA n 1 78 ALA n 1 79 GLN n 1 80 ALA n 1 81 ARG n 1 82 LYS n 1 83 ASP n 1 84 PHE n 1 85 ALA n 1 86 GLN n 1 87 GLY n 1 88 ALA n 1 89 ALA n 1 90 THR n 1 91 ALA n 1 92 LYS n 1 93 VAL n 1 94 LEU n 1 95 GLY n 1 96 GLU n 1 97 ASN n 1 98 GLU n 1 99 GLU n 1 100 LEU n 1 101 THR n 1 102 LYS n 1 103 SER n 1 104 LEU n 1 105 VAL n 1 106 SER n 1 107 PHE n 1 108 ASN n 1 109 LEU n 1 110 SER n 1 111 MSE n 1 112 VAL n 1 113 SER n 1 114 GLN n 1 115 ASP n 1 116 TYR n 1 117 GLU n 1 118 GLN n 1 119 VAL n 1 120 SER n 1 121 GLU n 1 122 LEU n 1 123 ALA n 1 124 LEU n 1 125 GLN n 1 126 ILE n 1 127 GLU n 1 128 GLU n 1 129 LEU n 1 130 ARG n 1 131 GLN n 1 132 GLU n 1 133 LYS n 1 134 GLY n 1 135 PHE n 1 136 LEU n 1 137 ALA n 1 138 ASN n 1 139 ASP n 1 140 THR n 1 141 SER n 1 142 PHE n 1 143 SER n 1 144 ASP n 1 145 VAL n 1 146 ARG n 1 147 ASP n 1 148 ILE n 1 149 ASP n 1 150 ASP n 1 151 ARG n 1 152 LEU n 1 153 GLY n 1 154 GLY n 1 155 TYR n 1 156 ILE n 1 157 GLU n 1 158 LEU n 1 159 PHE n 1 160 SER n 1 161 THR n 1 162 ALA n 1 163 GLY n 1 164 ASN n 1 165 TYR n 1 166 PHE n 1 167 LEU n 1 168 VAL n 1 169 PRO n 1 170 ILE n 1 171 ALA n 1 172 SER n 1 173 ILE n 1 174 ASN n 1 175 THR n 1 176 LEU n 1 177 GLU n 1 178 ILE n 1 179 LYS n 1 180 SER n 1 181 ALA n 1 182 THR n 1 183 SER n 1 184 LEU n 1 185 LEU n 1 186 GLU n 1 187 SER n 1 188 VAL n 1 189 TRP n 1 190 ARG n 1 191 PRO n 1 192 VAL n 1 193 GLU n 1 194 PHE n 1 195 ASP n 1 196 ILE n 1 197 ASP n 1 198 GLY n 1 199 LEU n 1 200 GLY n 1 201 GLU n 1 202 GLY n 1 203 GLU n 1 204 GLY n 1 205 HIS n 1 206 MSE n 1 207 PRO n 1 208 MSE n 1 209 THR n 1 210 TYR n 1 211 VAL n 1 212 ASP n 1 213 SER n 1 214 GLU n 1 215 SER n 1 216 ASP n 1 217 ALA n 1 218 GLN n 1 219 LYS n 1 220 LEU n 1 221 GLY n 1 222 ARG n 1 223 GLU n 1 224 THR n 1 225 ASP n 1 226 TRP n 1 227 LYS n 1 228 GLN n 1 229 ILE n 1 230 ALA n 1 231 ASP n 1 232 LYS n 1 233 GLU n 1 234 VAL n 1 235 TYR n 1 236 LEU n 1 237 GLY n 1 238 LEU n 1 239 GLY n 1 240 LEU n 1 241 LYS n 1 242 CYS n 1 243 TRP n 1 244 LEU n 1 245 VAL n 1 246 GLY n 1 247 GLU n 1 248 MSE n 1 249 ALA n 1 250 LEU n 1 251 PRO n 1 252 ILE n 1 253 SER n 1 254 ASP n 1 255 LEU n 1 256 GLN n 1 257 ASN n 1 258 LEU n 1 259 GLN n 1 260 VAL n 1 261 ILE n 1 262 LYS n 1 263 GLU n 1 264 LEU n 1 265 ALA n 1 266 LEU n 1 267 GLU n 1 268 HIS n 1 269 HIS n 1 270 HIS n 1 271 HIS n 1 272 HIS n 1 273 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Vibrio _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Vibrio parahaemolyticus' _entity_src_gen.gene_src_strain 'RIMD 2210633' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio parahaemolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 223926 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pET21 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name BL21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q87HD3_VIBPA _struct_ref.pdbx_db_accession Q87HD3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTQWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQA RKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLANDTSFSDVRDIDDRLGGYIELFS TAGNYFLVPIASINTLEIKSATSLLESVWRPVEFDIDGLGEGEGHMPMTYVDSESDAQKLGRETDWKQIADKEVYLGLGL KCWLVGEMALPISDLQNLQVIKELA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1ZBP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 265 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q87HD3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 265 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 265 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1ZBP MSE A 55 ? UNP Q87HD3 MET 55 'MODIFIED RESIDUE' 55 1 1 1ZBP MSE A 111 ? UNP Q87HD3 MET 111 'MODIFIED RESIDUE' 111 2 1 1ZBP MSE A 206 ? UNP Q87HD3 MET 206 'MODIFIED RESIDUE' 206 3 1 1ZBP MSE A 208 ? UNP Q87HD3 MET 208 'MODIFIED RESIDUE' 208 4 1 1ZBP MSE A 248 ? UNP Q87HD3 MET 248 'MODIFIED RESIDUE' 248 5 1 1ZBP LEU A 266 ? UNP Q87HD3 ? ? 'CLONING ARTIFACT' 266 6 1 1ZBP GLU A 267 ? UNP Q87HD3 ? ? 'CLONING ARTIFACT' 267 7 1 1ZBP HIS A 268 ? UNP Q87HD3 ? ? 'EXPRESSION TAG' 268 8 1 1ZBP HIS A 269 ? UNP Q87HD3 ? ? 'EXPRESSION TAG' 269 9 1 1ZBP HIS A 270 ? UNP Q87HD3 ? ? 'EXPRESSION TAG' 270 10 1 1ZBP HIS A 271 ? UNP Q87HD3 ? ? 'EXPRESSION TAG' 271 11 1 1ZBP HIS A 272 ? UNP Q87HD3 ? ? 'EXPRESSION TAG' 272 12 1 1ZBP HIS A 273 ? UNP Q87HD3 ? ? 'EXPRESSION TAG' 273 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ZBP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.23 _exptl_crystal.density_percent_sol 61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '100 mM sodium cacodylate, 20% PEG8K, 200 mM magnesium acetate, 5 mM DTT, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-03-15 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97916 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97916 # _reflns.entry_id 1ZBP _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.4 _reflns.number_obs 28733 _reflns.number_all 28906 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_Rsym_value 0.036 _reflns.pdbx_netI_over_sigmaI 17 _reflns.B_iso_Wilson_estimate 34.1 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.365 _reflns_shell.pdbx_Rsym_value 0.314 _reflns_shell.meanI_over_sigI_obs 3.71 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1ZBP _refine.ls_number_reflns_obs 26121 _refine.ls_number_reflns_all 2906 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 356841.50 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.06 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 90.4 _refine.ls_R_factor_obs 0.239 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.239 _refine.ls_R_factor_R_free 0.292 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.4 _refine.ls_number_reflns_R_free 2464 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 46.7 _refine.aniso_B[1][1] 3.78 _refine.aniso_B[2][2] 3.78 _refine.aniso_B[3][3] -7.56 _refine.aniso_B[1][2] 5.39 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.321776 _refine.solvent_model_param_bsol 31.6572 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model OVERALL _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ZBP _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.30 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.45 _refine_analyze.Luzzati_sigma_a_free 0.39 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2082 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 2126 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 25.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.75 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.55 _refine_ls_shell.number_reflns_R_work 3164 _refine_ls_shell.R_factor_R_work 0.299 _refine_ls_shell.percent_reflns_obs 70.9 _refine_ls_shell.R_factor_R_free 0.354 _refine_ls_shell.R_factor_R_free_error 0.020 _refine_ls_shell.percent_reflns_R_free 9.3 _refine_ls_shell.number_reflns_R_free 325 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1ZBP _struct.title 'X-Ray Crystal Structure of Protein VPA1032 from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR44' _struct.pdbx_descriptor 'hypothetical protein VPA1032' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZBP _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;alpha-beta protein, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 3 ? LEU A 8 ? GLN A 3 LEU A 8 1 ? 6 HELX_P HELX_P2 2 GLN A 12 ? ALA A 26 ? GLN A 12 ALA A 26 1 ? 15 HELX_P HELX_P3 3 ASP A 30 ? GLY A 45 ? ASP A 30 GLY A 45 1 ? 16 HELX_P HELX_P4 4 ASP A 46 ? PHE A 61 ? ASP A 46 PHE A 61 1 ? 16 HELX_P HELX_P5 5 TYR A 64 ? ALA A 85 ? TYR A 64 ALA A 85 1 ? 22 HELX_P HELX_P6 6 ASN A 97 ? GLN A 114 ? ASN A 97 GLN A 114 1 ? 18 HELX_P HELX_P7 7 ASP A 115 ? ARG A 130 ? ASP A 115 ARG A 130 1 ? 16 HELX_P HELX_P8 8 LEU A 184 ? SER A 187 ? LEU A 184 SER A 187 5 ? 4 HELX_P HELX_P9 9 SER A 215 ? LEU A 220 ? SER A 215 LEU A 220 1 ? 6 HELX_P HELX_P10 10 SER A 253 ? LEU A 255 ? SER A 253 LEU A 255 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 54 C ? ? ? 1_555 A MSE 55 N ? ? A LEU 54 A MSE 55 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 55 C ? ? ? 1_555 A GLN 56 N ? ? A MSE 55 A GLN 56 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A SER 110 C ? ? ? 1_555 A MSE 111 N ? ? A SER 110 A MSE 111 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 111 C ? ? ? 1_555 A VAL 112 N ? ? A MSE 111 A VAL 112 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A HIS 205 C ? ? ? 1_555 A MSE 206 N ? ? A HIS 205 A MSE 206 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 206 C ? ? ? 1_555 A PRO 207 N ? ? A MSE 206 A PRO 207 1_555 ? ? ? ? ? ? ? 1.341 ? covale7 covale ? ? A PRO 207 C ? ? ? 1_555 A MSE 208 N ? ? A PRO 207 A MSE 208 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? A MSE 208 C ? ? ? 1_555 A THR 209 N ? ? A MSE 208 A THR 209 1_555 ? ? ? ? ? ? ? 1.330 ? covale9 covale ? ? A GLU 247 C ? ? ? 1_555 A MSE 248 N ? ? A GLU 247 A MSE 248 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale ? ? A MSE 248 C ? ? ? 1_555 A ALA 249 N ? ? A MSE 248 A ALA 249 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 6 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 91 ? LYS A 92 ? ALA A 91 LYS A 92 A 2 TYR A 165 ? PRO A 169 ? TYR A 165 PRO A 169 A 3 TYR A 155 ? PHE A 159 ? TYR A 155 PHE A 159 B 1 THR A 140 ? PHE A 142 ? THR A 140 PHE A 142 B 2 PHE A 135 ? ALA A 137 ? PHE A 135 ALA A 137 B 3 ASN A 257 ? VAL A 260 ? ASN A 257 VAL A 260 B 4 ILE A 173 ? ILE A 178 ? ILE A 173 ILE A 178 B 5 TRP A 189 ? ILE A 196 ? TRP A 189 ILE A 196 B 6 GLY A 200 ? PRO A 207 ? GLY A 200 PRO A 207 C 1 VAL A 145 ? ASP A 147 ? VAL A 145 ASP A 147 C 2 CYS A 242 ? VAL A 245 ? CYS A 242 VAL A 245 C 3 MSE A 248 ? PRO A 251 ? MSE A 248 PRO A 251 D 1 THR A 224 ? GLN A 228 ? THR A 224 GLN A 228 D 2 TYR A 235 ? GLY A 239 ? TYR A 235 GLY A 239 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 91 ? N ALA A 91 O TYR A 165 ? O TYR A 165 A 2 3 O PHE A 166 ? O PHE A 166 N LEU A 158 ? N LEU A 158 B 1 2 O THR A 140 ? O THR A 140 N ALA A 137 ? N ALA A 137 B 2 3 N LEU A 136 ? N LEU A 136 O GLN A 259 ? O GLN A 259 B 3 4 O VAL A 260 ? O VAL A 260 N ASN A 174 ? N ASN A 174 B 4 5 N GLU A 177 ? N GLU A 177 O GLU A 193 ? O GLU A 193 B 5 6 N VAL A 192 ? N VAL A 192 O GLY A 204 ? O GLY A 204 C 1 2 N ARG A 146 ? N ARG A 146 O LEU A 244 ? O LEU A 244 C 2 3 N TRP A 243 ? N TRP A 243 O LEU A 250 ? O LEU A 250 D 1 2 N ASP A 225 ? N ASP A 225 O LEU A 238 ? O LEU A 238 # _database_PDB_matrix.entry_id 1ZBP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ZBP _atom_sites.fract_transf_matrix[1][1] 0.010266 _atom_sites.fract_transf_matrix[1][2] 0.005927 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011854 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009524 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 TRP 4 4 4 TRP TRP A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 MSE 55 55 55 MSE MSE A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 MSE 111 111 111 MSE MSE A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 GLN 131 131 131 GLN GLN A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 ARG 151 151 151 ARG ARG A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 TYR 155 155 155 TYR TYR A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 THR 161 161 161 THR THR A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 TYR 165 165 165 TYR TYR A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 SER 172 172 172 SER SER A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 TRP 189 189 189 TRP TRP A . n A 1 190 ARG 190 190 190 ARG ARG A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 PHE 194 194 194 PHE PHE A . n A 1 195 ASP 195 195 195 ASP ASP A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 HIS 205 205 205 HIS HIS A . n A 1 206 MSE 206 206 206 MSE MSE A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 MSE 208 208 208 MSE MSE A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 TYR 210 210 210 TYR TYR A . n A 1 211 VAL 211 211 211 VAL VAL A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 LYS 219 219 219 LYS LYS A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 THR 224 224 224 THR THR A . n A 1 225 ASP 225 225 225 ASP ASP A . n A 1 226 TRP 226 226 226 TRP TRP A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 GLN 228 228 228 GLN GLN A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 LYS 232 232 232 LYS LYS A . n A 1 233 GLU 233 233 233 GLU GLU A . n A 1 234 VAL 234 234 234 VAL VAL A . n A 1 235 TYR 235 235 235 TYR TYR A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 LYS 241 241 241 LYS LYS A . n A 1 242 CYS 242 242 242 CYS CYS A . n A 1 243 TRP 243 243 243 TRP TRP A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 VAL 245 245 245 VAL VAL A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 MSE 248 248 248 MSE MSE A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 ILE 252 252 252 ILE ILE A . n A 1 253 SER 253 253 253 SER SER A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 GLN 256 256 256 GLN GLN A . n A 1 257 ASN 257 257 257 ASN ASN A . n A 1 258 LEU 258 258 258 LEU LEU A . n A 1 259 GLN 259 259 259 GLN GLN A . n A 1 260 VAL 260 260 260 VAL VAL A . n A 1 261 ILE 261 261 261 ILE ILE A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 GLU 263 263 263 GLU GLU A . n A 1 264 LEU 264 264 264 LEU LEU A . n A 1 265 ALA 265 265 265 ALA ALA A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 GLU 267 267 267 GLU GLU A . n A 1 268 HIS 268 268 ? ? ? A . n A 1 269 HIS 269 269 ? ? ? A . n A 1 270 HIS 270 270 ? ? ? A . n A 1 271 HIS 271 271 ? ? ? A . n A 1 272 HIS 272 272 ? ? ? A . n A 1 273 HIS 273 273 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 274 1 HOH HOH A . B 2 HOH 2 275 2 HOH HOH A . B 2 HOH 3 276 3 HOH HOH A . B 2 HOH 4 277 4 HOH HOH A . B 2 HOH 5 278 5 HOH HOH A . B 2 HOH 6 279 6 HOH HOH A . B 2 HOH 7 280 7 HOH HOH A . B 2 HOH 8 281 8 HOH HOH A . B 2 HOH 9 282 9 HOH HOH A . B 2 HOH 10 283 10 HOH HOH A . B 2 HOH 11 284 11 HOH HOH A . B 2 HOH 12 285 12 HOH HOH A . B 2 HOH 13 286 13 HOH HOH A . B 2 HOH 14 287 14 HOH HOH A . B 2 HOH 15 288 15 HOH HOH A . B 2 HOH 16 289 16 HOH HOH A . B 2 HOH 17 290 17 HOH HOH A . B 2 HOH 18 291 18 HOH HOH A . B 2 HOH 19 292 19 HOH HOH A . B 2 HOH 20 293 20 HOH HOH A . B 2 HOH 21 294 21 HOH HOH A . B 2 HOH 22 295 22 HOH HOH A . B 2 HOH 23 296 23 HOH HOH A . B 2 HOH 24 297 24 HOH HOH A . B 2 HOH 25 298 25 HOH HOH A . B 2 HOH 26 299 26 HOH HOH A . B 2 HOH 27 300 27 HOH HOH A . B 2 HOH 28 301 28 HOH HOH A . B 2 HOH 29 302 29 HOH HOH A . B 2 HOH 30 303 30 HOH HOH A . B 2 HOH 31 304 31 HOH HOH A . B 2 HOH 32 305 32 HOH HOH A . B 2 HOH 33 306 33 HOH HOH A . B 2 HOH 34 307 34 HOH HOH A . B 2 HOH 35 308 35 HOH HOH A . B 2 HOH 36 309 36 HOH HOH A . B 2 HOH 37 310 37 HOH HOH A . B 2 HOH 38 311 38 HOH HOH A . B 2 HOH 39 312 39 HOH HOH A . B 2 HOH 40 313 40 HOH HOH A . B 2 HOH 41 314 41 HOH HOH A . B 2 HOH 42 315 42 HOH HOH A . B 2 HOH 43 316 43 HOH HOH A . B 2 HOH 44 317 44 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 55 A MSE 55 ? MET SELENOMETHIONINE 2 A MSE 111 A MSE 111 ? MET SELENOMETHIONINE 3 A MSE 206 A MSE 206 ? MET SELENOMETHIONINE 4 A MSE 208 A MSE 208 ? MET SELENOMETHIONINE 5 A MSE 248 A MSE 248 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SnB phasing . ? 4 SOLVE phasing . ? 5 RESOLVE phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 27 ? ? -170.24 66.49 2 1 ALA A 85 ? ? -61.22 7.03 3 1 GLN A 86 ? ? -153.88 -64.55 4 1 ALA A 89 ? ? -159.69 25.81 5 1 VAL A 93 ? ? -91.02 45.02 6 1 TYR A 116 ? ? -65.35 0.88 7 1 ASP A 195 ? ? -163.69 91.19 8 1 LEU A 199 ? ? -140.26 -16.01 9 1 ILE A 229 ? ? -54.06 -89.65 10 1 ALA A 230 ? ? -115.32 -99.43 11 1 GLU A 233 ? ? -98.72 30.27 12 1 LEU A 264 ? ? -39.79 102.21 13 1 ALA A 265 ? ? 153.12 -20.35 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A HIS 268 ? A HIS 268 3 1 Y 1 A HIS 269 ? A HIS 269 4 1 Y 1 A HIS 270 ? A HIS 270 5 1 Y 1 A HIS 271 ? A HIS 271 6 1 Y 1 A HIS 272 ? A HIS 272 7 1 Y 1 A HIS 273 ? A HIS 273 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #