HEADER SIGNALING PROTEIN 10-APR-05 1ZC4 TITLE CRYSTAL STRUCTURE OF THE RAL-BINDING DOMAIN OF EXO84 IN COMPLEX WITH TITLE 2 THE ACTIVE RALA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAL-A; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: EXOCYST COMPLEX PROTEIN EXO84; COMPND 8 CHAIN: B, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RALA, RAL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-2T; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 13 ORGANISM_COMMON: NORWAY RAT; SOURCE 14 ORGANISM_TAXID: 10116; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PGEX-2T KEYWDS EXOCYTOSIS, SMALL GTPASE, GTP-BINDING PROTEIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.JIN,J.R.JUNUTULA,H.T.MATERN,K.E.ERVIN,R.H.SCHELLER,A.T.BRUNGER REVDAT 5 14-FEB-24 1ZC4 1 REMARK REVDAT 4 20-OCT-21 1ZC4 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1ZC4 1 VERSN REVDAT 2 28-JUN-05 1ZC4 1 JRNL REVDAT 1 14-JUN-05 1ZC4 0 JRNL AUTH R.JIN,J.R.JUNUTULA,H.T.MATERN,K.E.ERVIN,R.H.SCHELLER, JRNL AUTH 2 A.T.BRUNGER JRNL TITL EXO84 AND SEC5 ARE COMPETITIVE REGULATORY SEC6/8 EFFECTORS JRNL TITL 2 TO THE RALA GTPASE. JRNL REF EMBO J. V. 24 2064 2005 JRNL REFN ISSN 0261-4189 JRNL PMID 15920473 JRNL DOI 10.1038/SJ.EMBOJ.7600699 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 499774.250 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 27186 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2732 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3837 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 419 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4676 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 153 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.31000 REMARK 3 B22 (A**2) : -6.66000 REMARK 3 B33 (A**2) : 5.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.85000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.36 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.310 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.850 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.500 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.270 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 29.94 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : GNP.PAR REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : GNP.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZC4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-05. REMARK 100 THE DEPOSITION ID IS D_1000032553. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-04; 15-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL11-1; BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945; 0.97927, 0.97900, REMARK 200 0.89194 REMARK 200 MONOCHROMATOR : SI(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28917 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-22% PEG3350, 0.1-0.2 M AMMONIUM REMARK 280 SULFATE, 0.1 M BIS-TRIS, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.69450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A COMPLEX BETWEEN RAL AND EXO84- REMARK 300 RBD. THE INTERACTION AS SEEN IN THE ASYMMETRIC UNIT IS ONLY A REMARK 300 CRYSTAL CONTACT. A FUNCTIONAL COMPLEX IS FORMED BETWEEN SYMMETRY REMARK 300 RELATED CHAINS A AND D, OR CHAINS B AND C. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 9 REMARK 465 ASN A 10 REMARK 465 LEU B 167 REMARK 465 GLU B 168 REMARK 465 THR B 169 REMARK 465 PRO B 170 REMARK 465 GLU B 284 REMARK 465 GLU B 285 REMARK 465 ALA B 286 REMARK 465 GLN C 9 REMARK 465 ASN C 10 REMARK 465 LEU D 167 REMARK 465 GLU D 168 REMARK 465 THR D 169 REMARK 465 PRO D 170 REMARK 465 GLU D 284 REMARK 465 GLU D 285 REMARK 465 ALA D 286 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG B 213 CB CG CD NE CZ NH1 NH2 REMARK 480 ARG D 213 CB CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 236 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 PRO D 236 C - N - CD ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 22 173.17 -53.86 REMARK 500 LYS A 47 -77.92 -97.26 REMARK 500 ALA A 48 111.71 -164.76 REMARK 500 ASP A 182 24.02 -70.11 REMARK 500 LEU B 191 -117.92 -112.60 REMARK 500 MET B 215 109.89 -44.66 REMARK 500 ASN B 235 105.65 -174.79 REMARK 500 PRO B 236 -69.13 14.90 REMARK 500 PRO B 237 11.29 -68.08 REMARK 500 MET B 246 90.00 -158.66 REMARK 500 PHE B 247 140.35 -33.95 REMARK 500 LYS C 47 -76.70 -103.61 REMARK 500 ALA C 48 115.41 -165.80 REMARK 500 ASN C 119 40.12 -96.07 REMARK 500 LEU C 131 53.11 -93.22 REMARK 500 ASN C 163 16.09 57.66 REMARK 500 LEU D 191 -107.85 -104.21 REMARK 500 ASP D 201 10.67 -142.99 REMARK 500 ARG D 212 -73.24 -28.50 REMARK 500 MET D 215 98.51 -43.66 REMARK 500 ASN D 235 97.94 -175.09 REMARK 500 PRO D 236 -75.19 23.47 REMARK 500 PRO D 237 6.21 -68.93 REMARK 500 MET D 246 115.57 -164.13 REMARK 500 PHE D 247 129.42 -39.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 28 OG REMARK 620 2 THR A 46 OG1 89.4 REMARK 620 3 GNP A 400 O2G 165.6 90.0 REMARK 620 4 GNP A 400 O2B 92.2 168.0 85.6 REMARK 620 5 HOH A 406 O 106.1 100.2 88.1 90.8 REMARK 620 6 HOH A 444 O 92.3 85.0 73.4 83.1 160.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 300 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 28 OG REMARK 620 2 THR C 46 OG1 85.8 REMARK 620 3 GNP C 500 O2G 169.0 86.6 REMARK 620 4 GNP C 500 O2B 92.1 163.8 93.0 REMARK 620 5 HOH C 549 O 84.7 78.7 86.1 85.2 REMARK 620 6 HOH C 550 O 99.2 102.8 90.2 93.4 175.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP C 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZC3 RELATED DB: PDB DBREF 1ZC4 A 9 183 UNP P11233 RALA_HUMAN 9 183 DBREF 1ZC4 C 9 183 UNP P11233 RALA_HUMAN 9 183 DBREF 1ZC4 B 167 286 UNP O54924 O54924_RAT 167 286 DBREF 1ZC4 D 167 286 UNP O54924 O54924_RAT 167 286 SEQADV 1ZC4 LEU A 72 UNP P11233 GLN 72 ENGINEERED MUTATION SEQADV 1ZC4 LEU C 72 UNP P11233 GLN 72 ENGINEERED MUTATION SEQRES 1 A 175 GLN ASN SER LEU ALA LEU HIS LYS VAL ILE MET VAL GLY SEQRES 2 A 175 SER GLY GLY VAL GLY LYS SER ALA LEU THR LEU GLN PHE SEQRES 3 A 175 MET TYR ASP GLU PHE VAL GLU ASP TYR GLU PRO THR LYS SEQRES 4 A 175 ALA ASP SER TYR ARG LYS LYS VAL VAL LEU ASP GLY GLU SEQRES 5 A 175 GLU VAL GLN ILE ASP ILE LEU ASP THR ALA GLY LEU GLU SEQRES 6 A 175 ASP TYR ALA ALA ILE ARG ASP ASN TYR PHE ARG SER GLY SEQRES 7 A 175 GLU GLY PHE LEU CYS VAL PHE SER ILE THR GLU MET GLU SEQRES 8 A 175 SER PHE ALA ALA THR ALA ASP PHE ARG GLU GLN ILE LEU SEQRES 9 A 175 ARG VAL LYS GLU ASP GLU ASN VAL PRO PHE LEU LEU VAL SEQRES 10 A 175 GLY ASN LYS SER ASP LEU GLU ASP LYS ARG GLN VAL SER SEQRES 11 A 175 VAL GLU GLU ALA LYS ASN ARG ALA GLU GLN TRP ASN VAL SEQRES 12 A 175 ASN TYR VAL GLU THR SER ALA LYS THR ARG ALA ASN VAL SEQRES 13 A 175 ASP LYS VAL PHE PHE ASP LEU MET ARG GLU ILE ARG ALA SEQRES 14 A 175 ARG LYS MET GLU ASP SER SEQRES 1 B 120 LEU GLU THR PRO GLY GLN TYR LEU VAL TYR ASN GLY ASP SEQRES 2 B 120 LEU VAL GLU TYR GLU ALA ASP HIS MET ALA GLN LEU GLN SEQRES 3 B 120 ARG VAL HIS GLY PHE LEU MET ASN ASP CYS LEU LEU VAL SEQRES 4 B 120 ALA THR TRP LEU PRO GLN ARG ARG GLY MET TYR ARG TYR SEQRES 5 B 120 ASN ALA LEU TYR PRO LEU ASP ARG LEU ALA VAL VAL ASN SEQRES 6 B 120 VAL LYS ASP ASN PRO PRO MET LYS ASP MET PHE LYS LEU SEQRES 7 B 120 LEU MET PHE PRO GLU SER ARG ILE PHE GLN ALA GLU ASN SEQRES 8 B 120 ALA LYS ILE LYS ARG GLU TRP LEU GLU VAL LEU GLU GLU SEQRES 9 B 120 THR LYS ARG ALA LEU SER ASP LYS ARG ARG ARG GLU GLN SEQRES 10 B 120 GLU GLU ALA SEQRES 1 C 175 GLN ASN SER LEU ALA LEU HIS LYS VAL ILE MET VAL GLY SEQRES 2 C 175 SER GLY GLY VAL GLY LYS SER ALA LEU THR LEU GLN PHE SEQRES 3 C 175 MET TYR ASP GLU PHE VAL GLU ASP TYR GLU PRO THR LYS SEQRES 4 C 175 ALA ASP SER TYR ARG LYS LYS VAL VAL LEU ASP GLY GLU SEQRES 5 C 175 GLU VAL GLN ILE ASP ILE LEU ASP THR ALA GLY LEU GLU SEQRES 6 C 175 ASP TYR ALA ALA ILE ARG ASP ASN TYR PHE ARG SER GLY SEQRES 7 C 175 GLU GLY PHE LEU CYS VAL PHE SER ILE THR GLU MET GLU SEQRES 8 C 175 SER PHE ALA ALA THR ALA ASP PHE ARG GLU GLN ILE LEU SEQRES 9 C 175 ARG VAL LYS GLU ASP GLU ASN VAL PRO PHE LEU LEU VAL SEQRES 10 C 175 GLY ASN LYS SER ASP LEU GLU ASP LYS ARG GLN VAL SER SEQRES 11 C 175 VAL GLU GLU ALA LYS ASN ARG ALA GLU GLN TRP ASN VAL SEQRES 12 C 175 ASN TYR VAL GLU THR SER ALA LYS THR ARG ALA ASN VAL SEQRES 13 C 175 ASP LYS VAL PHE PHE ASP LEU MET ARG GLU ILE ARG ALA SEQRES 14 C 175 ARG LYS MET GLU ASP SER SEQRES 1 D 120 LEU GLU THR PRO GLY GLN TYR LEU VAL TYR ASN GLY ASP SEQRES 2 D 120 LEU VAL GLU TYR GLU ALA ASP HIS MET ALA GLN LEU GLN SEQRES 3 D 120 ARG VAL HIS GLY PHE LEU MET ASN ASP CYS LEU LEU VAL SEQRES 4 D 120 ALA THR TRP LEU PRO GLN ARG ARG GLY MET TYR ARG TYR SEQRES 5 D 120 ASN ALA LEU TYR PRO LEU ASP ARG LEU ALA VAL VAL ASN SEQRES 6 D 120 VAL LYS ASP ASN PRO PRO MET LYS ASP MET PHE LYS LEU SEQRES 7 D 120 LEU MET PHE PRO GLU SER ARG ILE PHE GLN ALA GLU ASN SEQRES 8 D 120 ALA LYS ILE LYS ARG GLU TRP LEU GLU VAL LEU GLU GLU SEQRES 9 D 120 THR LYS ARG ALA LEU SER ASP LYS ARG ARG ARG GLU GLN SEQRES 10 D 120 GLU GLU ALA HET MG A 200 1 HET GNP A 400 32 HET MG C 300 1 HET GNP C 500 32 HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER FORMUL 5 MG 2(MG 2+) FORMUL 6 GNP 2(C10 H17 N6 O13 P3) FORMUL 9 HOH *153(H2 O) HELIX 1 1 GLY A 26 ASP A 37 1 12 HELIX 2 2 TYR A 75 SER A 85 1 11 HELIX 3 3 GLU A 97 ALA A 103 1 7 HELIX 4 4 ALA A 103 GLU A 116 1 14 HELIX 5 5 LYS A 128 ARG A 135 5 8 HELIX 6 6 SER A 138 ASN A 150 1 13 HELIX 7 7 ASN A 163 ASP A 182 1 20 HELIX 8 8 ASN B 257 ARG B 281 1 25 HELIX 9 9 GLY C 26 ASP C 37 1 12 HELIX 10 10 TYR C 75 SER C 85 1 11 HELIX 11 11 GLU C 97 ALA C 103 1 7 HELIX 12 12 ALA C 103 GLU C 116 1 14 HELIX 13 13 LEU C 131 ARG C 135 5 5 HELIX 14 14 SER C 138 ASN C 150 1 13 HELIX 15 15 ASN C 163 SER C 183 1 21 HELIX 16 16 ASN D 257 GLN D 283 1 27 SHEET 1 A13 TYR A 153 GLU A 155 0 SHEET 2 A13 PHE A 122 ASN A 127 1 N GLY A 126 O VAL A 154 SHEET 3 A13 GLY A 88 SER A 94 1 N CYS A 91 O VAL A 125 SHEET 4 A13 LEU A 14 VAL A 20 1 N VAL A 20 O VAL A 92 SHEET 5 A13 GLU A 60 THR A 69 1 O ASP A 65 N VAL A 17 SHEET 6 A13 ALA A 48 LEU A 57 -1 N VAL A 55 O VAL A 62 SHEET 7 A13 ALA D 228 VAL D 232 1 O ASN D 231 N ALA A 48 SHEET 8 A13 MET D 241 MET D 246 -1 O LYS D 243 N VAL D 230 SHEET 9 A13 GLU D 249 GLN D 254 -1 O ARG D 251 N LEU D 244 SHEET 10 A13 LEU D 174 TYR D 183 -1 N VAL D 181 O GLN D 254 SHEET 11 A13 GLN D 190 MET D 199 -1 O LEU D 198 N TYR D 176 SHEET 12 A13 CYS D 202 LEU D 209 -1 O LEU D 204 N PHE D 197 SHEET 13 A13 TYR D 216 PRO D 223 -1 O TYR D 222 N LEU D 203 SHEET 1 B13 TYR B 216 PRO B 223 0 SHEET 2 B13 CYS B 202 LEU B 209 -1 N LEU B 203 O TYR B 222 SHEET 3 B13 ALA B 189 MET B 199 -1 N PHE B 197 O LEU B 204 SHEET 4 B13 LEU B 174 GLU B 184 -1 N TYR B 176 O LEU B 198 SHEET 5 B13 GLU B 249 GLN B 254 -1 O ILE B 252 N TYR B 183 SHEET 6 B13 MET B 241 MET B 246 -1 N PHE B 242 O PHE B 253 SHEET 7 B13 ALA B 228 VAL B 232 -1 N VAL B 230 O LYS B 243 SHEET 8 B13 ALA C 48 LEU C 57 1 O ALA C 48 N ASN B 231 SHEET 9 B13 GLU C 60 THR C 69 -1 O GLU C 60 N LEU C 57 SHEET 10 B13 LEU C 14 VAL C 20 1 N VAL C 17 O ASP C 65 SHEET 11 B13 GLY C 88 SER C 94 1 O VAL C 92 N VAL C 20 SHEET 12 B13 PHE C 122 ASN C 127 1 O ASN C 127 N PHE C 93 SHEET 13 B13 ASN C 152 GLU C 155 1 O ASN C 152 N LEU C 124 LINK OG SER A 28 MG MG A 200 1555 1555 1.91 LINK OG1 THR A 46 MG MG A 200 1555 1555 2.00 LINK MG MG A 200 O2G GNP A 400 1555 1555 2.19 LINK MG MG A 200 O2B GNP A 400 1555 1555 2.11 LINK MG MG A 200 O HOH A 406 1555 1555 2.07 LINK MG MG A 200 O HOH A 444 1555 1555 2.13 LINK OG SER C 28 MG MG C 300 1555 1555 2.00 LINK OG1 THR C 46 MG MG C 300 1555 1555 2.06 LINK MG MG C 300 O2G GNP C 500 1555 1555 2.00 LINK MG MG C 300 O2B GNP C 500 1555 1555 2.08 LINK MG MG C 300 O HOH C 549 1555 1555 1.98 LINK MG MG C 300 O HOH C 550 1555 1555 2.08 CISPEP 1 PHE B 247 PRO B 248 0 0.22 CISPEP 2 PHE D 247 PRO D 248 0 0.17 SITE 1 AC1 5 SER A 28 THR A 46 GNP A 400 HOH A 406 SITE 2 AC1 5 HOH A 444 SITE 1 AC2 5 SER C 28 THR C 46 GNP C 500 HOH C 549 SITE 2 AC2 5 HOH C 550 SITE 1 AC3 24 GLY A 24 VAL A 25 GLY A 26 LYS A 27 SITE 2 AC3 24 SER A 28 ALA A 29 PHE A 39 VAL A 40 SITE 3 AC3 24 GLU A 41 ASP A 42 TYR A 43 THR A 46 SITE 4 AC3 24 GLY A 71 ASN A 127 LYS A 128 ASP A 130 SITE 5 AC3 24 LEU A 131 SER A 157 ALA A 158 LYS A 159 SITE 6 AC3 24 MG A 200 HOH A 406 HOH A 424 HOH A 444 SITE 1 AC4 24 GLY C 23 GLY C 24 VAL C 25 GLY C 26 SITE 2 AC4 24 LYS C 27 SER C 28 ALA C 29 PHE C 39 SITE 3 AC4 24 VAL C 40 GLU C 41 ASP C 42 TYR C 43 SITE 4 AC4 24 GLU C 44 THR C 46 GLY C 71 ASN C 127 SITE 5 AC4 24 LYS C 128 ASP C 130 SER C 157 ALA C 158 SITE 6 AC4 24 LYS C 159 MG C 300 HOH C 549 HOH C 550 CRYST1 52.912 113.389 70.680 90.00 102.77 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018899 0.000000 0.004285 0.00000 SCALE2 0.000000 0.008819 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014507 0.00000