HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-APR-05 1ZC6 TITLE CRYSTAL STRUCTURE OF PUTATIVE N-ACETYLGLUCOSAMINE KINASE FROM TITLE 2 CHROMOBACTERIUM VIOLACEUM. NORTHEAST STRUCTURAL GENOMICS TARGET TITLE 3 CVR23. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE N-ACETYLGLUCOSAMINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHROMOBACTERIUM VIOLACEUM; SOURCE 3 ORGANISM_TAXID: 243365; SOURCE 4 STRAIN: ATCC 12472; SOURCE 5 GENE: CV2896; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET21 KEYWDS N-ACETYLGLUCOSAMINE KINASE, NESG, Q7NU07_CHRVO, CVR23, STRUCTURAL KEYWDS 2 GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL KEYWDS 3 GENOMICS CONSORTIUM, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR S.M.VOROBIEV,A.KUZIN,F.FOROUHAR,M.ABASHIDZE,T.B.ACTON,R.XIAO,L.-C.MA, AUTHOR 2 G.T.MONTELIONE,L.TONG,J.F.HUNT,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG) REVDAT 3 13-JUL-11 1ZC6 1 VERSN REVDAT 2 24-FEB-09 1ZC6 1 VERSN REVDAT 1 10-MAY-05 1ZC6 0 JRNL AUTH S.M.VOROBIEV,A.KUZIN,F.FOROUHAR,M.ABASHIDZE,T.B.ACTON, JRNL AUTH 2 R.XIAO,L.-C.MA,G.T.MONTELIONE,L.TONG,J.F.HUNT JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE N-ACETYLGLUCOSAMINE KINASE JRNL TITL 2 FROM CHROMOBACTERIUM VIOLACEUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 291990.990 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 85106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3353 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 11791 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE : 0.3870 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 409 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.019 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4182 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 84 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.53000 REMARK 3 B22 (A**2) : -3.53000 REMARK 3 B33 (A**2) : 7.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.35 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.38 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.88 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 31.14 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZC6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-05. REMARK 100 THE RCSB ID CODE IS RCSB032555. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9876 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90884 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 10.100 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : 0.86300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15-0.25 M MAGNESIUM CHLORIDE, 15-20% REMARK 280 PEG 3350, 0.1 M MES , PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 89.12250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 58.83150 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 89.12250 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 58.83150 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 89.12250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 58.83150 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 89.12250 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 58.83150 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 89.12250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 58.83150 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 89.12250 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 58.83150 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 89.12250 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 58.83150 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 89.12250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 89.12250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 58.83150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 465 GLN A 4 REMARK 465 THR A 5 REMARK 465 MSE A 6 REMARK 465 ASN A 7 REMARK 465 ARG A 293 REMARK 465 PRO A 294 REMARK 465 SER A 295 REMARK 465 THR A 296 REMARK 465 ARG A 297 REMARK 465 LEU A 298 REMARK 465 GLU A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 465 HIS A 304 REMARK 465 HIS A 305 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 296 REMARK 465 ARG B 297 REMARK 465 LEU B 298 REMARK 465 GLU B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 465 HIS B 302 REMARK 465 HIS B 303 REMARK 465 HIS B 304 REMARK 465 HIS B 305 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 3 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 ARG B 293 CG CD NE CZ NH1 NH2 REMARK 470 SER B 295 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 88 129.27 -21.20 REMARK 500 ARG A 89 -4.63 80.10 REMARK 500 GLN A 90 -84.00 -120.14 REMARK 500 ASP A 247 72.07 -152.01 REMARK 500 ASN B 7 70.44 56.01 REMARK 500 SER B 43 18.77 -141.38 REMARK 500 TYR B 152 -69.52 -17.05 REMARK 500 ASP B 247 79.22 -150.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 152 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 TYR B 152 24.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CVR23 RELATED DB: TARGETDB DBREF 1ZC6 A 1 297 UNP Q7NU07 Q7NU07_CHRVO 1 297 DBREF 1ZC6 B 1 297 UNP Q7NU07 Q7NU07_CHRVO 1 297 SEQADV 1ZC6 MSE A 6 UNP Q7NU07 MET 6 MODIFIED RESIDUE SEQADV 1ZC6 MSE A 37 UNP Q7NU07 MET 37 MODIFIED RESIDUE SEQADV 1ZC6 MSE A 173 UNP Q7NU07 MET 173 MODIFIED RESIDUE SEQADV 1ZC6 MSE A 199 UNP Q7NU07 MET 199 MODIFIED RESIDUE SEQADV 1ZC6 MSE A 199 UNP Q7NU07 MET 200 MODIFIED RESIDUE SEQADV 1ZC6 LEU A 298 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 GLU A 299 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS A 300 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS A 301 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS A 302 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS A 303 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS A 304 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS A 305 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 MSE B 6 UNP Q7NU07 MET 6 MODIFIED RESIDUE SEQADV 1ZC6 MSE B 37 UNP Q7NU07 MET 37 MODIFIED RESIDUE SEQADV 1ZC6 MSE B 173 UNP Q7NU07 MET 173 MODIFIED RESIDUE SEQADV 1ZC6 MSE B 199 UNP Q7NU07 MET 199 MODIFIED RESIDUE SEQADV 1ZC6 MSE B 199 UNP Q7NU07 MET 200 MODIFIED RESIDUE SEQADV 1ZC6 LEU B 298 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 GLU B 299 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS B 300 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS B 301 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS B 302 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS B 303 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS B 304 UNP Q7NU07 CLONING ARTIFACT SEQADV 1ZC6 HIS B 305 UNP Q7NU07 CLONING ARTIFACT SEQRES 1 A 305 MET ALA ARG GLN THR MSE ASN PRO SER ILE ARG TYR LEU SEQRES 2 A 305 ILE GLY VAL ASP GLY GLY GLY THR GLY THR ARG ILE ARG SEQRES 3 A 305 LEU HIS ALA SER ASP GLY THR PRO LEU ALA MSE ALA GLU SEQRES 4 A 305 GLY GLY ALA SER ALA LEU SER GLN GLY ILE ALA LYS SER SEQRES 5 A 305 TRP GLN ALA VAL LEU SER THR LEU GLU ALA ALA PHE GLN SEQRES 6 A 305 GLN ALA GLY LEU PRO ALA ALA PRO ALA SER ALA CYS ALA SEQRES 7 A 305 ILE GLY LEU GLY LEU SER GLY VAL HIS ASN ARG GLN TRP SEQRES 8 A 305 ALA GLY GLU PHE GLU SER GLN ALA PRO GLY PHE ALA ARG SEQRES 9 A 305 LEU SER LEU ALA THR ASP GLY TYR THR THR LEU LEU GLY SEQRES 10 A 305 ALA HIS GLY GLY GLN PRO GLY ILE ILE VAL ALA LEU GLY SEQRES 11 A 305 THR GLY SER ILE GLY GLU ALA LEU TYR PRO ASP GLY SER SEQRES 12 A 305 HIS ARG GLU ALA GLY GLY TRP GLY TYR PRO SER GLY ASP SEQRES 13 A 305 GLU ALA SER GLY ALA TRP LEU GLY GLN ARG ALA ALA GLN SEQRES 14 A 305 LEU THR GLN MSE ALA LEU ASP GLY ARG HIS SER HIS SER SEQRES 15 A 305 PRO LEU THR ARG ALA VAL LEU ASP PHE VAL GLY GLY ASP SEQRES 16 A 305 TRP GLN ALA MSE MSE ALA TRP ASN GLY ARG ALA THR PRO SEQRES 17 A 305 ALA GLN PHE ALA ARG LEU ALA PRO LEU VAL LEU SER ALA SEQRES 18 A 305 ALA ARG VAL ASP PRO GLU ALA ASP ALA LEU LEU ARG GLN SEQRES 19 A 305 ALA GLY GLU ASP ALA TRP ALA ILE ALA ARG ALA LEU ASP SEQRES 20 A 305 PRO GLN ASP GLU LEU PRO VAL ALA LEU CYS GLY GLY LEU SEQRES 21 A 305 GLY GLN ALA LEU ARG ASP TRP LEU PRO PRO GLY PHE ARG SEQRES 22 A 305 GLN ARG LEU VAL ALA PRO GLN GLY ASP SER ALA GLN GLY SEQRES 23 A 305 ALA LEU LEU LEU LEU GLN ARG PRO SER THR ARG LEU GLU SEQRES 24 A 305 HIS HIS HIS HIS HIS HIS SEQRES 1 B 305 MET ALA ARG GLN THR MSE ASN PRO SER ILE ARG TYR LEU SEQRES 2 B 305 ILE GLY VAL ASP GLY GLY GLY THR GLY THR ARG ILE ARG SEQRES 3 B 305 LEU HIS ALA SER ASP GLY THR PRO LEU ALA MSE ALA GLU SEQRES 4 B 305 GLY GLY ALA SER ALA LEU SER GLN GLY ILE ALA LYS SER SEQRES 5 B 305 TRP GLN ALA VAL LEU SER THR LEU GLU ALA ALA PHE GLN SEQRES 6 B 305 GLN ALA GLY LEU PRO ALA ALA PRO ALA SER ALA CYS ALA SEQRES 7 B 305 ILE GLY LEU GLY LEU SER GLY VAL HIS ASN ARG GLN TRP SEQRES 8 B 305 ALA GLY GLU PHE GLU SER GLN ALA PRO GLY PHE ALA ARG SEQRES 9 B 305 LEU SER LEU ALA THR ASP GLY TYR THR THR LEU LEU GLY SEQRES 10 B 305 ALA HIS GLY GLY GLN PRO GLY ILE ILE VAL ALA LEU GLY SEQRES 11 B 305 THR GLY SER ILE GLY GLU ALA LEU TYR PRO ASP GLY SER SEQRES 12 B 305 HIS ARG GLU ALA GLY GLY TRP GLY TYR PRO SER GLY ASP SEQRES 13 B 305 GLU ALA SER GLY ALA TRP LEU GLY GLN ARG ALA ALA GLN SEQRES 14 B 305 LEU THR GLN MSE ALA LEU ASP GLY ARG HIS SER HIS SER SEQRES 15 B 305 PRO LEU THR ARG ALA VAL LEU ASP PHE VAL GLY GLY ASP SEQRES 16 B 305 TRP GLN ALA MSE MSE ALA TRP ASN GLY ARG ALA THR PRO SEQRES 17 B 305 ALA GLN PHE ALA ARG LEU ALA PRO LEU VAL LEU SER ALA SEQRES 18 B 305 ALA ARG VAL ASP PRO GLU ALA ASP ALA LEU LEU ARG GLN SEQRES 19 B 305 ALA GLY GLU ASP ALA TRP ALA ILE ALA ARG ALA LEU ASP SEQRES 20 B 305 PRO GLN ASP GLU LEU PRO VAL ALA LEU CYS GLY GLY LEU SEQRES 21 B 305 GLY GLN ALA LEU ARG ASP TRP LEU PRO PRO GLY PHE ARG SEQRES 22 B 305 GLN ARG LEU VAL ALA PRO GLN GLY ASP SER ALA GLN GLY SEQRES 23 B 305 ALA LEU LEU LEU LEU GLN ARG PRO SER THR ARG LEU GLU SEQRES 24 B 305 HIS HIS HIS HIS HIS HIS MODRES 1ZC6 MSE A 37 MET SELENOMETHIONINE MODRES 1ZC6 MSE A 173 MET SELENOMETHIONINE MODRES 1ZC6 MSE A 199 MET SELENOMETHIONINE MODRES 1ZC6 MSE A 200 MET SELENOMETHIONINE MODRES 1ZC6 MSE B 6 MET SELENOMETHIONINE MODRES 1ZC6 MSE B 37 MET SELENOMETHIONINE MODRES 1ZC6 MSE B 173 MET SELENOMETHIONINE MODRES 1ZC6 MSE B 199 MET SELENOMETHIONINE MODRES 1ZC6 MSE B 200 MET SELENOMETHIONINE HET MSE A 37 8 HET MSE A 173 8 HET MSE A 199 8 HET MSE A 200 8 HET MSE B 6 8 HET MSE B 37 8 HET MSE B 173 8 HET MSE B 199 8 HET MSE B 200 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 3 HOH *84(H2 O) HELIX 1 1 ALA A 44 GLN A 47 5 4 HELIX 2 2 GLY A 48 ALA A 67 1 20 HELIX 3 3 PRO A 73 SER A 75 5 3 HELIX 4 4 GLN A 90 GLN A 98 1 9 HELIX 5 5 THR A 109 HIS A 119 1 11 HELIX 6 6 SER A 159 ASP A 176 1 18 HELIX 7 7 SER A 182 GLY A 193 1 12 HELIX 8 8 ASP A 195 ARG A 205 1 11 HELIX 9 9 THR A 207 ARG A 213 1 7 HELIX 10 10 LEU A 214 ALA A 222 1 9 HELIX 11 11 ASP A 225 ASP A 247 1 23 HELIX 12 12 GLY A 258 LEU A 264 1 7 HELIX 13 13 ARG A 265 LEU A 268 5 4 HELIX 14 14 PRO A 269 LEU A 276 1 8 HELIX 15 15 ASP A 282 LEU A 291 1 10 HELIX 16 16 ALA B 44 GLN B 47 5 4 HELIX 17 17 GLY B 48 ALA B 67 1 20 HELIX 18 18 PRO B 73 SER B 75 5 3 HELIX 19 19 ASN B 88 GLN B 98 1 11 HELIX 20 20 ASP B 110 HIS B 119 1 10 HELIX 21 21 SER B 159 ASP B 176 1 18 HELIX 22 22 SER B 182 GLY B 193 1 12 HELIX 23 23 ASP B 195 ARG B 205 1 11 HELIX 24 24 THR B 207 ARG B 213 1 7 HELIX 25 25 LEU B 214 ALA B 222 1 9 HELIX 26 26 ASP B 225 ASP B 247 1 23 HELIX 27 27 GLY B 258 LEU B 264 1 7 HELIX 28 28 ARG B 265 LEU B 268 5 4 HELIX 29 29 PRO B 269 GLN B 274 1 6 HELIX 30 30 ASP B 282 LEU B 291 1 10 SHEET 1 A 5 PRO A 34 GLY A 40 0 SHEET 2 A 5 THR A 23 ALA A 29 -1 N LEU A 27 O ALA A 36 SHEET 3 A 5 TYR A 12 GLY A 18 -1 N LEU A 13 O HIS A 28 SHEET 4 A 5 CYS A 77 LEU A 83 1 O ALA A 78 N ILE A 14 SHEET 5 A 5 ARG A 104 ALA A 108 1 O SER A 106 N LEU A 81 SHEET 1 B 4 HIS A 144 ALA A 147 0 SHEET 2 B 4 SER A 133 LEU A 138 -1 N GLY A 135 O ALA A 147 SHEET 3 B 4 GLY A 124 LEU A 129 -1 N ALA A 128 O ILE A 134 SHEET 4 B 4 VAL A 254 CYS A 257 1 O CYS A 257 N VAL A 127 SHEET 1 C 5 PRO B 34 GLY B 40 0 SHEET 2 C 5 GLY B 22 ALA B 29 -1 N ILE B 25 O ALA B 38 SHEET 3 C 5 TYR B 12 GLY B 19 -1 N ASP B 17 O ARG B 24 SHEET 4 C 5 CYS B 77 LEU B 83 1 O GLY B 82 N VAL B 16 SHEET 5 C 5 ARG B 104 THR B 109 1 O ARG B 104 N ILE B 79 SHEET 1 D 4 HIS B 144 GLY B 148 0 SHEET 2 D 4 SER B 133 LEU B 138 -1 N ALA B 137 O ARG B 145 SHEET 3 D 4 GLY B 124 LEU B 129 -1 N ALA B 128 O ILE B 134 SHEET 4 D 4 VAL B 254 CYS B 257 1 O CYS B 257 N LEU B 129 LINK C ALA A 36 N MSE A 37 1555 1555 1.33 LINK C MSE A 37 N ALA A 38 1555 1555 1.33 LINK C GLN A 172 N MSE A 173 1555 1555 1.33 LINK C MSE A 173 N ALA A 174 1555 1555 1.33 LINK C ALA A 198 N MSE A 199 1555 1555 1.33 LINK C MSE A 199 N MSE A 200 1555 1555 1.33 LINK C MSE A 200 N ALA A 201 1555 1555 1.33 LINK C THR B 5 N MSE B 6 1555 1555 1.33 LINK C MSE B 6 N ASN B 7 1555 1555 1.33 LINK C ALA B 36 N MSE B 37 1555 1555 1.33 LINK C MSE B 37 N ALA B 38 1555 1555 1.33 LINK C GLN B 172 N MSE B 173 1555 1555 1.34 LINK C MSE B 173 N ALA B 174 1555 1555 1.33 LINK C ALA B 198 N MSE B 199 1555 1555 1.33 LINK C MSE B 199 N MSE B 200 1555 1555 1.33 LINK C MSE B 200 N ALA B 201 1555 1555 1.33 CISPEP 1 TYR A 152 PRO A 153 0 -0.20 CRYST1 178.245 178.245 117.663 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005610 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008499 0.00000