HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 13-APR-05 1ZD0 TITLE CRYSTAL STRUCTURE OF PFU-542154 CONSERVED HYPOTHETICAL PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PF0523; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 GENE: PF0523; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24 DBAM KEYWDS STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, SOUTHEAST KEYWDS 2 COLLABORATORY FOR STRUCTURAL GENOMICS, SECSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.E.HABEL,Z.J.LIU,P.S.HORANYI,Q.J.T.FLORENCE,W.TEMPEL,W.ZHOU,L.CHEN, AUTHOR 2 D.LEE,J.NGUYEN,S.H.CHANG,P.BERETON,M.IZUMI,F.E.JENNY JR.,F.L.POOLE AUTHOR 3 II,C.SHAH,F.J.SUGAR,M.W.W.ADAMS,J.P.ROSE,B.C.WANG,SOUTHEAST AUTHOR 4 COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) REVDAT 4 11-OCT-17 1ZD0 1 REMARK REVDAT 3 24-FEB-09 1ZD0 1 VERSN REVDAT 2 31-MAY-05 1ZD0 1 TITLE JRNL REVDAT 1 17-MAY-05 1ZD0 0 JRNL AUTH J.E.HABEL,Z.J.LIU,P.S.HORANYI,Q.J.T.FLORENCE,W.TEMPEL, JRNL AUTH 2 W.ZHOU,L.CHEN,D.LEE,J.NGUYEN,S.H.CHANG,P.BERETON,M.IZUMI, JRNL AUTH 3 F.E.JENNY JR.,F.L.POOLE II,C.SHAH,F.J.SUGAR,M.W.W.ADAMS, JRNL AUTH 4 J.P.ROSE,B.C.WANG JRNL TITL CRYSTAL STRUCTURE OF PFU-542154 CONSERVED HYPOTHETICAL JRNL TITL 2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 15838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 797 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 918 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1074 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : 0.20000 REMARK 3 B12 (A**2) : -0.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.790 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1156 ; 0.016 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1557 ; 1.422 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 140 ; 6.240 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 52 ;46.929 ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 234 ;14.450 ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;20.471 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 192 ; 0.100 ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): 815 ; 0.006 ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 587 ; 0.233 ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 821 ; 0.304 ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 88 ; 0.151 ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.027 ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.276 ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.114 ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 738 ; 0.981 ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1160 ; 1.470 ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 470 ; 2.129 ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 397 ; 3.010 ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ARP/WARP AND MOLPROBITY WERE ALSO USED REMARK 3 IN THE REFINEMENT REMARK 4 REMARK 4 1ZD0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-05. REMARK 100 THE DEPOSITION ID IS D_1000032585. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-04; 05-JAN-05; 04-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 100; 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N; N REMARK 200 RADIATION SOURCE : APS; ROTATING ANODE; ROTATING REMARK 200 ANODE REMARK 200 BEAMLINE : 22-ID; NULL; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; RIGAKU MICROMAX-007; REMARK 200 RIGAKU FR-D REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97; 2.29; 2.29 REMARK 200 MONOCHROMATOR : NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; RIGAKU RAXIS IV; REMARK 200 RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15870 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.21000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH; SINGLE REMARK 200 WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAS REMARK 200 SOFTWARE USED: SOLVE 2.03, RESOLVE 2.03 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM ACETATE AND PEG 3350, PH REMARK 280 7.7, MODIFIED MICROBATCH, TEMPERATURE 293K. MAGNESIUM ACETATE, REMARK 280 METHANOL, AND PEG 3350, PH 7.7, MODIFIED MICROBATCH, TEMPERATURE REMARK 280 293K. MAGNESIUM ACETATE, METHANOL, AND PEG 3350, PH 7.7, REMARK 280 MODIFIED MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.56667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.13333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.13333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.56667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 414 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 ILE A 145 REMARK 465 ILE A 146 REMARK 465 GLU A 147 REMARK 465 ALA A 148 REMARK 465 LEU A 149 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 10 CB CG CD OE1 OE2 REMARK 470 ILE A 11 CB CG1 CG2 CD1 REMARK 470 ARG A 12 CD NE CZ NH1 NH2 REMARK 470 LYS A 14 CE NZ REMARK 470 LYS A 32 CE NZ REMARK 470 ARG A 67 CD NE CZ NH1 NH2 REMARK 470 LYS A 88 NZ REMARK 470 LYS A 92 CE NZ REMARK 470 LYS A 93 CD CE NZ REMARK 470 LYS A 97 CD CE NZ REMARK 470 GLU A 108 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C ALA A 144 UNK UNX A 407 1.53 REMARK 500 CA HIS A 4 UNK UNX A 401 1.69 REMARK 500 NZ LYS A 138 UNK UNX A 410 1.97 REMARK 500 ND2 ASN A 45 UNK UNX A 413 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 119 CB SER A 119 OG 0.182 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 10 20.48 94.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 467 O REMARK 620 2 HOH A 468 O 86.8 REMARK 620 3 HOH A 487 O 91.0 80.7 REMARK 620 4 ASN A 45 OD1 90.9 175.9 96.0 REMARK 620 5 HOH A 428 O 89.7 96.4 176.9 87.0 REMARK 620 6 HOH A 427 O 174.6 88.7 85.2 93.4 93.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MOH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MOH A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MOH A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PFU-542154-001 RELATED DB: TARGETDB DBREF 1ZD0 A 9 149 GB 18976895 NP_578252 2 142 SEQADV 1ZD0 ALA A 0 GB 18976895 CLONING ARTIFACT SEQADV 1ZD0 HIS A 1 GB 18976895 EXPRESSION TAG SEQADV 1ZD0 HIS A 2 GB 18976895 EXPRESSION TAG SEQADV 1ZD0 HIS A 3 GB 18976895 EXPRESSION TAG SEQADV 1ZD0 HIS A 4 GB 18976895 EXPRESSION TAG SEQADV 1ZD0 HIS A 5 GB 18976895 EXPRESSION TAG SEQADV 1ZD0 HIS A 6 GB 18976895 EXPRESSION TAG SEQADV 1ZD0 GLY A 7 GB 18976895 CLONING ARTIFACT SEQADV 1ZD0 SER A 8 GB 18976895 CLONING ARTIFACT SEQRES 1 A 150 ALA HIS HIS HIS HIS HIS HIS GLY SER LEU GLU ILE ARG SEQRES 2 A 150 THR LYS VAL GLY GLU ILE CYS ILE SER LYS VAL TRP LEU SEQRES 3 A 150 THR ASP GLU GLN ILE ASN LYS LEU PHE ASP ARG PHE LYS SEQRES 4 A 150 GLY ASP TYR GLN VAL VAL ASN ALA GLU CYS ALA ASP LYS SEQRES 5 A 150 VAL ILE PHE ALA THR ILE ILE ALA ILE LYS ALA VAL LYS SEQRES 6 A 150 GLU GLY ARG SER ILE ALA LYS THR VAL PRO GLY GLU ILE SEQRES 7 A 150 LEU VAL ARG LEU SER GLY ASN ARG GLN ILE LYS GLU ALA SEQRES 8 A 150 ILE LYS LYS VAL GLY ALA LYS GLU GLY GLU ASN TYR ILE SEQRES 9 A 150 VAL THR PHE GLY GLU ASN ALA SER ALA LEU LEU GLN LYS SEQRES 10 A 150 ILE LEU SER THR LEU GLU ILE LYS GLU LEU GLU LEU GLU SEQRES 11 A 150 ARG CYS ASP LEU GLU TYR ALA LYS LYS ALA PHE GLU ASP SEQRES 12 A 150 ILE ALA ILE ILE GLU ALA LEU HET MG A 200 1 HET UNX A 401 1 HET UNX A 402 1 HET UNX A 403 1 HET UNX A 404 1 HET UNX A 405 1 HET UNX A 406 1 HET UNX A 407 1 HET UNX A 408 1 HET UNX A 409 1 HET UNX A 410 1 HET UNX A 411 1 HET UNX A 412 1 HET UNX A 413 1 HET MOH A 301 2 HET MOH A 302 2 HET MOH A 303 2 HETNAM MG MAGNESIUM ION HETNAM UNX UNKNOWN ATOM OR ION HETNAM MOH METHANOL FORMUL 2 MG MG 2+ FORMUL 3 UNX 13(X) FORMUL 16 MOH 3(C H4 O) FORMUL 19 HOH *93(H2 O) HELIX 1 1 THR A 26 PHE A 37 1 12 HELIX 2 2 CYS A 48 GLU A 65 1 18 HELIX 3 3 THR A 72 GLY A 83 1 12 HELIX 4 4 GLN A 86 GLY A 95 1 10 HELIX 5 5 ASN A 109 LEU A 121 1 13 HELIX 6 6 ASP A 132 ALA A 144 1 13 SHEET 1 A 4 TYR A 41 VAL A 44 0 SHEET 2 A 4 GLY A 99 PHE A 106 -1 O TYR A 102 N VAL A 44 SHEET 3 A 4 ILE A 18 LEU A 25 -1 N VAL A 23 O ASN A 101 SHEET 4 A 4 LYS A 124 LEU A 126 -1 O LEU A 126 N LYS A 22 SSBOND 1 CYS A 48 CYS A 131 1555 1555 2.08 LINK MG MG A 200 O HOH A 467 1555 1555 1.96 LINK MG MG A 200 O HOH A 468 1555 1555 2.04 LINK MG MG A 200 O HOH A 487 1555 1555 2.15 LINK MG MG A 200 OD1 ASN A 45 1555 1555 2.03 LINK MG MG A 200 O HOH A 428 1555 1555 2.00 LINK MG MG A 200 O HOH A 427 1555 1555 2.22 CISPEP 1 LEU A 9 GLU A 10 0 26.04 SITE 1 AC1 6 ASN A 45 HOH A 427 HOH A 428 HOH A 467 SITE 2 AC1 6 HOH A 468 HOH A 487 SITE 1 AC2 3 HIS A 4 HIS A 5 ARG A 85 SITE 1 AC3 3 GLU A 28 ASN A 31 UNX A 409 SITE 1 AC4 2 GLU A 65 UNX A 405 SITE 1 AC5 2 GLU A 65 UNX A 405 SITE 1 AC6 3 LYS A 61 UNX A 403 UNX A 404 SITE 1 AC7 2 LYS A 61 ALA A 144 SITE 1 AC8 3 GLU A 28 LYS A 32 UNX A 402 SITE 1 AC9 2 LYS A 138 HOH A 497 SITE 1 BC1 2 ARG A 67 ILE A 69 SITE 1 BC2 2 GLU A 134 HOH A 500 SITE 1 BC3 6 ASN A 45 LYS A 93 VAL A 94 GLY A 95 SITE 2 BC3 6 MOH A 301 HOH A 493 SITE 1 BC4 4 ASN A 45 GLU A 47 LYS A 93 UNX A 413 SITE 1 BC5 2 GLY A 107 GLU A 122 SITE 1 BC6 5 THR A 13 LYS A 14 LYS A 138 GLU A 141 SITE 2 BC6 5 ASP A 142 CRYST1 53.460 53.460 85.700 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018700 0.010800 0.000000 0.00000 SCALE2 0.000000 0.021600 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011700 0.00000