data_1ZHN # _entry.id 1ZHN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZHN pdb_00001zhn 10.2210/pdb1zhn/pdb RCSB RCSB032734 ? ? WWPDB D_1000032734 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1CD1 'Mouse CD1d with no ligand' unspecified PDB 1GZP 'Human CD1b bound to PI' unspecified PDB 1GZQ 'Human CD1b bound to GM1' unspecified PDB 1ONQ 'Human CD1a bound to sulfatide self ligand' unspecified # _pdbx_database_status.entry_id 1ZHN _pdbx_database_status.status_code REL _pdbx_database_status.recvd_initial_deposition_date 2005-04-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Giabbai, B.' 1 'Sidobre, S.' 2 'Crispin, M.M.D.' 3 'Sanchez Ruiz, Y.' 4 'Bachi, A.' 5 'Kronenberg, M.' 6 'Wilson, I.A.' 7 'Degano, M.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of mouse CD1d bound to the self ligand phosphatidylcholine: a molecular basis for NKT cell activation' J.Immunol. 175 977 984 2005 JOIMA3 US 0022-1767 0952 ? 16002697 ? 1 'Crystal structure of mouse CD1: An MHC-like fold with a large hydrophobic binding groove' Science 277 339 345 1997 SCIEAS US 0036-8075 0038 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Giabbai, B.' 1 ? primary 'Sidobre, S.' 2 ? primary 'Crispin, M.M.D.' 3 ? primary 'Sanchez Ruiz, Y.' 4 ? primary 'Bachi, A.' 5 ? primary 'Kronenberg, M.' 6 ? primary 'Wilson, I.A.' 7 ? primary 'Degano, M.' 8 ? 1 'Zeng, Z.' 9 ? 1 'Castano, A.R.' 10 ? 1 'Segelke, B.W.' 11 ? 1 'Stura, E.A.' 12 ? 1 'Peterson, P.A.' 13 ? 1 'Wilson, I.A.' 14 ? # _cell.entry_id 1ZHN _cell.length_a 41.798 _cell.length_b 106.909 _cell.length_c 110.060 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZHN _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.cell_setting orthorhombic _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD1d1 antigen' 31131.100 1 ? ? ? 'Self phospholipid copurified with protein' 2 polymer man beta-2-microglobulin 11704.359 1 ? ? ? ? 3 branched man 'alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose' 367.349 1 ? ? ? ? 4 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1056.964 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 non-polymer syn '7-[(DODECANOYLOXY)METHYL]-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-3,5,8-TRIOXA-4-PHOSPHADOTRIACONTAN-1-AMINIUM 4-OXIDE' 804.172 1 ? ? ? ? 7 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 8 water nat water 18.015 50 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'T-cell surface glycoprotein CD1d1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVK MMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLND TCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWY LQATLDVEAGEEAGLACRVKHSSLGGQDIILYW ; ;NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVK MMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLND TCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWY LQATLDVEAGEEAGLACRVKHSSLGGQDIILYW ; A ? 2 'polypeptide(L)' no no ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHDSMAEPKTVYWDRDM ; ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHDSMAEPKTVYWDRDM ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 TYR n 1 3 THR n 1 4 PHE n 1 5 ARG n 1 6 CYS n 1 7 LEU n 1 8 GLN n 1 9 MET n 1 10 SER n 1 11 SER n 1 12 PHE n 1 13 ALA n 1 14 ASN n 1 15 ARG n 1 16 SER n 1 17 TRP n 1 18 SER n 1 19 ARG n 1 20 THR n 1 21 ASP n 1 22 SER n 1 23 VAL n 1 24 VAL n 1 25 TRP n 1 26 LEU n 1 27 GLY n 1 28 ASP n 1 29 LEU n 1 30 GLN n 1 31 THR n 1 32 HIS n 1 33 ARG n 1 34 TRP n 1 35 SER n 1 36 ASN n 1 37 ASP n 1 38 SER n 1 39 ALA n 1 40 THR n 1 41 ILE n 1 42 SER n 1 43 PHE n 1 44 THR n 1 45 LYS n 1 46 PRO n 1 47 TRP n 1 48 SER n 1 49 GLN n 1 50 GLY n 1 51 LYS n 1 52 LEU n 1 53 SER n 1 54 ASN n 1 55 GLN n 1 56 GLN n 1 57 TRP n 1 58 GLU n 1 59 LYS n 1 60 LEU n 1 61 GLN n 1 62 HIS n 1 63 MET n 1 64 PHE n 1 65 GLN n 1 66 VAL n 1 67 TYR n 1 68 ARG n 1 69 VAL n 1 70 SER n 1 71 PHE n 1 72 THR n 1 73 ARG n 1 74 ASP n 1 75 ILE n 1 76 GLN n 1 77 GLU n 1 78 LEU n 1 79 VAL n 1 80 LYS n 1 81 MET n 1 82 MET n 1 83 SER n 1 84 PRO n 1 85 LYS n 1 86 GLU n 1 87 ASP n 1 88 TYR n 1 89 PRO n 1 90 ILE n 1 91 GLU n 1 92 ILE n 1 93 GLN n 1 94 LEU n 1 95 SER n 1 96 ALA n 1 97 GLY n 1 98 CYS n 1 99 GLU n 1 100 MET n 1 101 TYR n 1 102 PRO n 1 103 GLY n 1 104 ASN n 1 105 ALA n 1 106 SER n 1 107 GLU n 1 108 SER n 1 109 PHE n 1 110 LEU n 1 111 HIS n 1 112 VAL n 1 113 ALA n 1 114 PHE n 1 115 GLN n 1 116 GLY n 1 117 LYS n 1 118 TYR n 1 119 VAL n 1 120 VAL n 1 121 ARG n 1 122 PHE n 1 123 TRP n 1 124 GLY n 1 125 THR n 1 126 SER n 1 127 TRP n 1 128 GLN n 1 129 THR n 1 130 VAL n 1 131 PRO n 1 132 GLY n 1 133 ALA n 1 134 PRO n 1 135 SER n 1 136 TRP n 1 137 LEU n 1 138 ASP n 1 139 LEU n 1 140 PRO n 1 141 ILE n 1 142 LYS n 1 143 VAL n 1 144 LEU n 1 145 ASN n 1 146 ALA n 1 147 ASP n 1 148 GLN n 1 149 GLY n 1 150 THR n 1 151 SER n 1 152 ALA n 1 153 THR n 1 154 VAL n 1 155 GLN n 1 156 MET n 1 157 LEU n 1 158 LEU n 1 159 ASN n 1 160 ASP n 1 161 THR n 1 162 CYS n 1 163 PRO n 1 164 LEU n 1 165 PHE n 1 166 VAL n 1 167 ARG n 1 168 GLY n 1 169 LEU n 1 170 LEU n 1 171 GLU n 1 172 ALA n 1 173 GLY n 1 174 LYS n 1 175 SER n 1 176 ASP n 1 177 LEU n 1 178 GLU n 1 179 LYS n 1 180 GLN n 1 181 GLU n 1 182 LYS n 1 183 PRO n 1 184 VAL n 1 185 ALA n 1 186 TRP n 1 187 LEU n 1 188 SER n 1 189 SER n 1 190 VAL n 1 191 PRO n 1 192 SER n 1 193 SER n 1 194 ALA n 1 195 HIS n 1 196 GLY n 1 197 HIS n 1 198 ARG n 1 199 GLN n 1 200 LEU n 1 201 VAL n 1 202 CYS n 1 203 HIS n 1 204 VAL n 1 205 SER n 1 206 GLY n 1 207 PHE n 1 208 TYR n 1 209 PRO n 1 210 LYS n 1 211 PRO n 1 212 VAL n 1 213 TRP n 1 214 VAL n 1 215 MET n 1 216 TRP n 1 217 MET n 1 218 ARG n 1 219 GLY n 1 220 ASP n 1 221 GLN n 1 222 GLU n 1 223 GLN n 1 224 GLN n 1 225 GLY n 1 226 THR n 1 227 HIS n 1 228 ARG n 1 229 GLY n 1 230 ASP n 1 231 PHE n 1 232 LEU n 1 233 PRO n 1 234 ASN n 1 235 ALA n 1 236 ASP n 1 237 GLU n 1 238 THR n 1 239 TRP n 1 240 TYR n 1 241 LEU n 1 242 GLN n 1 243 ALA n 1 244 THR n 1 245 LEU n 1 246 ASP n 1 247 VAL n 1 248 GLU n 1 249 ALA n 1 250 GLY n 1 251 GLU n 1 252 GLU n 1 253 ALA n 1 254 GLY n 1 255 LEU n 1 256 ALA n 1 257 CYS n 1 258 ARG n 1 259 VAL n 1 260 LYS n 1 261 HIS n 1 262 SER n 1 263 SER n 1 264 LEU n 1 265 GLY n 1 266 GLY n 1 267 GLN n 1 268 ASP n 1 269 ILE n 1 270 ILE n 1 271 LEU n 1 272 TYR n 1 273 TRP n 2 1 ILE n 2 2 GLN n 2 3 LYS n 2 4 THR n 2 5 PRO n 2 6 GLN n 2 7 ILE n 2 8 GLN n 2 9 VAL n 2 10 TYR n 2 11 SER n 2 12 ARG n 2 13 HIS n 2 14 PRO n 2 15 PRO n 2 16 GLU n 2 17 ASN n 2 18 GLY n 2 19 LYS n 2 20 PRO n 2 21 ASN n 2 22 ILE n 2 23 LEU n 2 24 ASN n 2 25 CYS n 2 26 TYR n 2 27 VAL n 2 28 THR n 2 29 GLN n 2 30 PHE n 2 31 HIS n 2 32 PRO n 2 33 PRO n 2 34 HIS n 2 35 ILE n 2 36 GLU n 2 37 ILE n 2 38 GLN n 2 39 MET n 2 40 LEU n 2 41 LYS n 2 42 ASN n 2 43 GLY n 2 44 LYS n 2 45 LYS n 2 46 ILE n 2 47 PRO n 2 48 LYS n 2 49 VAL n 2 50 GLU n 2 51 MET n 2 52 SER n 2 53 ASP n 2 54 MET n 2 55 SER n 2 56 PHE n 2 57 SER n 2 58 LYS n 2 59 ASP n 2 60 TRP n 2 61 SER n 2 62 PHE n 2 63 TYR n 2 64 ILE n 2 65 LEU n 2 66 ALA n 2 67 HIS n 2 68 THR n 2 69 GLU n 2 70 PHE n 2 71 THR n 2 72 PRO n 2 73 THR n 2 74 GLU n 2 75 THR n 2 76 ASP n 2 77 THR n 2 78 TYR n 2 79 ALA n 2 80 CYS n 2 81 ARG n 2 82 VAL n 2 83 LYS n 2 84 HIS n 2 85 ASP n 2 86 SER n 2 87 MET n 2 88 ALA n 2 89 GLU n 2 90 PRO n 2 91 LYS n 2 92 THR n 2 93 VAL n 2 94 TYR n 2 95 TRP n 2 96 ASP n 2 97 ARG n 2 98 ASP n 2 99 MET n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'house mouse' Mus ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? 'fruit fly' 'Drosophila melanogaster' 7227 Drosophila ? ? ? ? ? ? ? 'S2 cells' ? ? ? ? ? ? pRmHa-3 ? ? ? ? ? 2 1 sample ? ? ? 'house mouse' Mus ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? 'fruit fly' 'Drosophila melanogaster' 7227 Drosophila ? ? ? ? ? ? ? 'S2 cells' ? ? ? ? ? ? pRmHa-3 ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 1 GB BAB22206 12832671 25 ;NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVK MMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLND TCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWY LQATLDVEAGEEAGLACRVKHSSLGGQDIILYW ; ? 2 2 UNP B2MG_MOUSE P01887 21 ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHDSMAEPKTVYWDRDM ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZHN A 1 ? 273 ? 12832671 25 ? 297 ? 7 279 2 2 1ZHN B 1 ? 99 ? P01887 21 ? 119 ? 1 99 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PC6 non-polymer . '7-[(DODECANOYLOXY)METHYL]-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-3,5,8-TRIOXA-4-PHOSPHADOTRIACONTAN-1-AMINIUM 4-OXIDE' ? 'C45 H90 N O8 P' 804.172 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ZHN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.9 _exptl_crystal.density_percent_sol 57.7 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_details '100 mM Tris, 200 mM NH4(SO4)2, 25% PEG 4000, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-05-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Mirrors _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 1ZHN _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.80 _reflns.d_resolution_low 76.70 _reflns.number_all 12734 _reflns.number_obs 12734 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.056 _reflns.pdbx_netI_over_sigmaI 8.4 _reflns.B_iso_Wilson_estimate 39.3 _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 96.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.29 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1810 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1ZHN _refine.ls_number_reflns_obs 11481 _refine.ls_number_reflns_all 11481 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 76.70 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 98.15 _refine.ls_R_factor_obs 0.22174 _refine.ls_R_factor_all 0.22174 _refine.ls_R_factor_R_work 0.21632 _refine.ls_R_factor_R_free 0.28097 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.1 _refine.ls_number_reflns_R_free 1018 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.896 _refine.correlation_coeff_Fo_to_Fc_free 0.838 _refine.B_iso_mean 25.724 _refine.aniso_B[1][1] -1.34 _refine.aniso_B[2][2] -1.16 _refine.aniso_B[3][3] 2.50 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1CD1 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.430 _refine.overall_SU_ML 0.309 _refine.overall_SU_B 16.190 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2987 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 170 _refine_hist.number_atoms_solvent 50 _refine_hist.number_atoms_total 3207 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 76.70 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.021 ? 3255 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2836 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.473 1.971 ? 4423 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.766 3.000 ? 6614 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.160 5.000 ? 366 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.718 24.178 ? 146 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.958 15.000 ? 514 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.189 15.000 ? 15 'X-RAY DIFFRACTION' ? r_chiral_restr 0.078 0.200 ? 481 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 3423 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 629 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 687 'X-RAY DIFFRACTION' ? r_nbd_other 0.186 0.200 ? 3012 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.189 0.200 ? 1537 'X-RAY DIFFRACTION' ? r_nbtor_other 0.089 0.200 ? 2029 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.178 0.200 ? 86 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.110 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.204 0.200 ? 42 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.170 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.688 1.500 ? 2385 'X-RAY DIFFRACTION' ? r_mcbond_other 0.067 1.500 ? 742 'X-RAY DIFFRACTION' ? r_mcangle_it 0.773 2.000 ? 2989 'X-RAY DIFFRACTION' ? r_scbond_it 0.957 3.000 ? 1665 'X-RAY DIFFRACTION' ? r_scangle_it 1.722 4.500 ? 1434 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.873 _refine_ls_shell.number_reflns_R_work 792 _refine_ls_shell.R_factor_R_work 0.302 _refine_ls_shell.percent_reflns_obs 95.57 _refine_ls_shell.R_factor_R_free 0.385 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1ZHN _struct.title 'Crystal Structure of mouse CD1d bound to the self ligand phosphatidylcholine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZHN _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM, MEMBRANE PROTEIN' _struct_keywords.text 'MHC fold; antigen binding domain; Ig fold, IMMUNE SYSTEM, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 8 ? # _struct_biol.id 1 _struct_biol.details ;The biological assembly is a heterodimeric CD1d/beta-2microglobulin complex bound to one PC molecule, as found in the crystal asymmetric unit ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 53 ? MET A 81 ? SER A 59 MET A 87 1 ? 29 HELX_P HELX_P2 2 PRO A 134 ? TRP A 136 ? PRO A 140 TRP A 142 5 ? 3 HELX_P HELX_P3 3 LEU A 137 ? ASP A 147 ? LEU A 143 ASP A 153 1 ? 11 HELX_P HELX_P4 4 ASP A 147 ? ASP A 160 ? ASP A 153 ASP A 166 1 ? 14 HELX_P HELX_P5 5 ASP A 160 ? GLY A 173 ? ASP A 166 GLY A 179 1 ? 14 HELX_P HELX_P6 6 GLY A 173 ? GLU A 178 ? GLY A 179 GLU A 184 1 ? 6 HELX_P HELX_P7 7 HIS A 261 ? GLY A 265 ? HIS A 267 GLY A 271 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 98 SG ? ? ? 1_555 A CYS 162 SG ? ? A CYS 104 A CYS 168 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf2 disulf ? ? A CYS 202 SG ? ? ? 1_555 A CYS 257 SG ? ? A CYS 208 A CYS 263 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 80 SG ? ? B CYS 25 B CYS 80 1_555 ? ? ? ? ? ? ? 2.028 ? ? covale1 covale one ? E NAG . C1 ? ? ? 1_555 A ASN 36 ND2 ? ? A NAG 2 A ASN 42 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale2 covale one ? A ASN 14 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 20 C NAG 1 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale3 covale one ? A ASN 159 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 165 D NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale4 covale both ? C NAG . O6 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 2 1_555 ? ? ? ? ? ? ? 1.446 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale6 covale both ? D NAG . O6 ? ? ? 1_555 D FUC . C1 ? ? D NAG 1 D FUC 6 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale7 covale both ? D NAG . O4 ? ? ? 1_555 D MAN . C1 ? ? D NAG 2 D MAN 3 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale8 covale both ? D MAN . O3 ? ? ? 1_555 D MAN . C1 ? ? D MAN 3 D MAN 4 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale9 covale both ? D MAN . O6 ? ? ? 1_555 D MAN . C1 ? ? D MAN 3 D MAN 5 1_555 ? ? ? ? ? ? ? 1.446 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 208 A . ? TYR 214 A PRO 209 A ? PRO 215 A 1 -1.45 2 HIS 31 B . ? HIS 31 B PRO 32 B ? PRO 32 B 1 5.13 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 42 ? PHE A 43 ? SER A 48 PHE A 49 A 2 LEU A 29 ? TRP A 34 ? LEU A 35 TRP A 40 A 3 SER A 18 ? LEU A 26 ? SER A 24 LEU A 32 A 4 TYR A 2 ? PHE A 12 ? TYR A 8 PHE A 18 A 5 GLU A 91 ? TYR A 101 ? GLU A 97 TYR A 107 A 6 ALA A 105 ? PHE A 114 ? ALA A 111 PHE A 120 A 7 LYS A 117 ? TRP A 123 ? LYS A 123 TRP A 129 A 8 SER A 126 ? THR A 129 ? SER A 132 THR A 135 B 1 VAL A 184 ? PRO A 191 ? VAL A 190 PRO A 197 B 2 HIS A 197 ? PHE A 207 ? HIS A 203 PHE A 213 B 3 TRP A 239 ? GLU A 248 ? TRP A 245 GLU A 254 B 4 HIS A 227 ? ARG A 228 ? HIS A 233 ARG A 234 C 1 VAL A 184 ? PRO A 191 ? VAL A 190 PRO A 197 C 2 HIS A 197 ? PHE A 207 ? HIS A 203 PHE A 213 C 3 TRP A 239 ? GLU A 248 ? TRP A 245 GLU A 254 C 4 LEU A 232 ? PRO A 233 ? LEU A 238 PRO A 239 D 1 GLN A 221 ? GLU A 222 ? GLN A 227 GLU A 228 D 2 TRP A 213 ? ARG A 218 ? TRP A 219 ARG A 224 D 3 LEU A 255 ? LYS A 260 ? LEU A 261 LYS A 266 D 4 ILE A 269 ? TYR A 272 ? ILE A 275 TYR A 278 E 1 GLN B 6 ? SER B 11 ? GLN B 6 SER B 11 E 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 E 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 E 4 GLU B 50 ? MET B 51 ? GLU B 50 MET B 51 F 1 GLN B 6 ? SER B 11 ? GLN B 6 SER B 11 F 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 F 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 F 4 SER B 55 ? PHE B 56 ? SER B 55 PHE B 56 G 1 LYS B 44 ? LYS B 45 ? LYS B 44 LYS B 45 G 2 GLU B 36 ? LYS B 41 ? GLU B 36 LYS B 41 G 3 TYR B 78 ? LYS B 83 ? TYR B 78 LYS B 83 G 4 LYS B 91 ? TYR B 94 ? LYS B 91 TYR B 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 42 ? O SER A 48 N ARG A 33 ? N ARG A 39 A 2 3 O LEU A 29 ? O LEU A 35 N LEU A 26 ? N LEU A 32 A 3 4 O ARG A 19 ? O ARG A 25 N SER A 11 ? N SER A 17 A 4 5 N CYS A 6 ? N CYS A 12 O ALA A 96 ? O ALA A 102 A 5 6 N GLY A 97 ? N GLY A 103 O PHE A 109 ? O PHE A 115 A 6 7 N VAL A 112 ? N VAL A 118 O VAL A 120 ? O VAL A 126 A 7 8 N TRP A 123 ? N TRP A 129 O SER A 126 ? O SER A 132 B 1 2 N SER A 188 ? N SER A 194 O VAL A 201 ? O VAL A 207 B 2 3 N ARG A 198 ? N ARG A 204 O VAL A 247 ? O VAL A 253 B 3 4 O THR A 244 ? O THR A 250 N HIS A 227 ? N HIS A 233 C 1 2 N SER A 188 ? N SER A 194 O VAL A 201 ? O VAL A 207 C 2 3 N ARG A 198 ? N ARG A 204 O VAL A 247 ? O VAL A 253 C 3 4 O TYR A 240 ? O TYR A 246 N LEU A 232 ? N LEU A 238 D 1 2 O GLN A 221 ? O GLN A 227 N ARG A 218 ? N ARG A 224 D 2 3 N MET A 217 ? N MET A 223 O ALA A 256 ? O ALA A 262 D 3 4 N VAL A 259 ? N VAL A 265 O ILE A 269 ? O ILE A 275 E 1 2 N GLN B 8 ? N GLN B 8 O TYR B 26 ? O TYR B 26 E 2 3 N CYS B 25 ? N CYS B 25 O ALA B 66 ? O ALA B 66 E 3 4 O HIS B 67 ? O HIS B 67 N GLU B 50 ? N GLU B 50 F 1 2 N GLN B 8 ? N GLN B 8 O TYR B 26 ? O TYR B 26 F 2 3 N CYS B 25 ? N CYS B 25 O ALA B 66 ? O ALA B 66 F 3 4 O TYR B 63 ? O TYR B 63 N SER B 55 ? N SER B 55 G 1 2 O LYS B 44 ? O LYS B 44 N LYS B 41 ? N LYS B 41 G 2 3 N GLN B 38 ? N GLN B 38 O ARG B 81 ? O ARG B 81 G 3 4 N VAL B 82 ? N VAL B 82 O LYS B 91 ? O LYS B 91 # _atom_sites.entry_id 1ZHN _atom_sites.fract_transf_matrix[1][1] 0.023925 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009354 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009086 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG C 1 HAS WRONG CHIRALITY AT ATOM C1' 2 'MAN D 3 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 7 7 ASN ASN A . n A 1 2 TYR 2 8 8 TYR TYR A . n A 1 3 THR 3 9 9 THR THR A . n A 1 4 PHE 4 10 10 PHE PHE A . n A 1 5 ARG 5 11 11 ARG ARG A . n A 1 6 CYS 6 12 12 CYS CYS A . n A 1 7 LEU 7 13 13 LEU LEU A . n A 1 8 GLN 8 14 14 GLN GLN A . n A 1 9 MET 9 15 15 MET MET A . n A 1 10 SER 10 16 16 SER SER A . n A 1 11 SER 11 17 17 SER SER A . n A 1 12 PHE 12 18 18 PHE PHE A . n A 1 13 ALA 13 19 19 ALA ALA A . n A 1 14 ASN 14 20 20 ASN ASN A . n A 1 15 ARG 15 21 21 ARG ARG A . n A 1 16 SER 16 22 22 SER SER A . n A 1 17 TRP 17 23 23 TRP TRP A . n A 1 18 SER 18 24 24 SER SER A . n A 1 19 ARG 19 25 25 ARG ARG A . n A 1 20 THR 20 26 26 THR THR A . n A 1 21 ASP 21 27 27 ASP ASP A . n A 1 22 SER 22 28 28 SER SER A . n A 1 23 VAL 23 29 29 VAL VAL A . n A 1 24 VAL 24 30 30 VAL VAL A . n A 1 25 TRP 25 31 31 TRP TRP A . n A 1 26 LEU 26 32 32 LEU LEU A . n A 1 27 GLY 27 33 33 GLY GLY A . n A 1 28 ASP 28 34 34 ASP ASP A . n A 1 29 LEU 29 35 35 LEU LEU A . n A 1 30 GLN 30 36 36 GLN GLN A . n A 1 31 THR 31 37 37 THR THR A . n A 1 32 HIS 32 38 38 HIS HIS A . n A 1 33 ARG 33 39 39 ARG ARG A . n A 1 34 TRP 34 40 40 TRP TRP A . n A 1 35 SER 35 41 41 SER SER A . n A 1 36 ASN 36 42 42 ASN ASN A . n A 1 37 ASP 37 43 43 ASP ASP A . n A 1 38 SER 38 44 44 SER SER A . n A 1 39 ALA 39 45 45 ALA ALA A . n A 1 40 THR 40 46 46 THR THR A . n A 1 41 ILE 41 47 47 ILE ILE A . n A 1 42 SER 42 48 48 SER SER A . n A 1 43 PHE 43 49 49 PHE PHE A . n A 1 44 THR 44 50 50 THR THR A . n A 1 45 LYS 45 51 51 LYS LYS A . n A 1 46 PRO 46 52 52 PRO PRO A . n A 1 47 TRP 47 53 53 TRP TRP A . n A 1 48 SER 48 54 54 SER SER A . n A 1 49 GLN 49 55 55 GLN GLN A . n A 1 50 GLY 50 56 56 GLY GLY A . n A 1 51 LYS 51 57 57 LYS LYS A . n A 1 52 LEU 52 58 58 LEU LEU A . n A 1 53 SER 53 59 59 SER SER A . n A 1 54 ASN 54 60 60 ASN ASN A . n A 1 55 GLN 55 61 61 GLN GLN A . n A 1 56 GLN 56 62 62 GLN GLN A . n A 1 57 TRP 57 63 63 TRP TRP A . n A 1 58 GLU 58 64 64 GLU GLU A . n A 1 59 LYS 59 65 65 LYS LYS A . n A 1 60 LEU 60 66 66 LEU LEU A . n A 1 61 GLN 61 67 67 GLN GLN A . n A 1 62 HIS 62 68 68 HIS HIS A . n A 1 63 MET 63 69 69 MET MET A . n A 1 64 PHE 64 70 70 PHE PHE A . n A 1 65 GLN 65 71 71 GLN GLN A . n A 1 66 VAL 66 72 72 VAL VAL A . n A 1 67 TYR 67 73 73 TYR TYR A . n A 1 68 ARG 68 74 74 ARG ARG A . n A 1 69 VAL 69 75 75 VAL VAL A . n A 1 70 SER 70 76 76 SER SER A . n A 1 71 PHE 71 77 77 PHE PHE A . n A 1 72 THR 72 78 78 THR THR A . n A 1 73 ARG 73 79 79 ARG ARG A . n A 1 74 ASP 74 80 80 ASP ASP A . n A 1 75 ILE 75 81 81 ILE ILE A . n A 1 76 GLN 76 82 82 GLN GLN A . n A 1 77 GLU 77 83 83 GLU GLU A . n A 1 78 LEU 78 84 84 LEU LEU A . n A 1 79 VAL 79 85 85 VAL VAL A . n A 1 80 LYS 80 86 86 LYS LYS A . n A 1 81 MET 81 87 87 MET MET A . n A 1 82 MET 82 88 88 MET MET A . n A 1 83 SER 83 89 89 SER SER A . n A 1 84 PRO 84 90 90 PRO PRO A . n A 1 85 LYS 85 91 91 LYS LYS A . n A 1 86 GLU 86 92 92 GLU GLU A . n A 1 87 ASP 87 93 ? ? ? A . n A 1 88 TYR 88 94 ? ? ? A . n A 1 89 PRO 89 95 ? ? ? A . n A 1 90 ILE 90 96 96 ILE ILE A . n A 1 91 GLU 91 97 97 GLU GLU A . n A 1 92 ILE 92 98 98 ILE ILE A . n A 1 93 GLN 93 99 99 GLN GLN A . n A 1 94 LEU 94 100 100 LEU LEU A . n A 1 95 SER 95 101 101 SER SER A . n A 1 96 ALA 96 102 102 ALA ALA A . n A 1 97 GLY 97 103 103 GLY GLY A . n A 1 98 CYS 98 104 104 CYS CYS A . n A 1 99 GLU 99 105 105 GLU GLU A . n A 1 100 MET 100 106 106 MET MET A . n A 1 101 TYR 101 107 107 TYR TYR A . n A 1 102 PRO 102 108 108 PRO PRO A . n A 1 103 GLY 103 109 109 GLY GLY A . n A 1 104 ASN 104 110 110 ASN ASN A . n A 1 105 ALA 105 111 111 ALA ALA A . n A 1 106 SER 106 112 112 SER SER A . n A 1 107 GLU 107 113 113 GLU GLU A . n A 1 108 SER 108 114 114 SER SER A . n A 1 109 PHE 109 115 115 PHE PHE A . n A 1 110 LEU 110 116 116 LEU LEU A . n A 1 111 HIS 111 117 117 HIS HIS A . n A 1 112 VAL 112 118 118 VAL VAL A . n A 1 113 ALA 113 119 119 ALA ALA A . n A 1 114 PHE 114 120 120 PHE PHE A . n A 1 115 GLN 115 121 121 GLN GLN A . n A 1 116 GLY 116 122 122 GLY GLY A . n A 1 117 LYS 117 123 123 LYS LYS A . n A 1 118 TYR 118 124 124 TYR TYR A . n A 1 119 VAL 119 125 125 VAL VAL A . n A 1 120 VAL 120 126 126 VAL VAL A . n A 1 121 ARG 121 127 127 ARG ARG A . n A 1 122 PHE 122 128 128 PHE PHE A . n A 1 123 TRP 123 129 129 TRP TRP A . n A 1 124 GLY 124 130 130 GLY GLY A . n A 1 125 THR 125 131 131 THR THR A . n A 1 126 SER 126 132 132 SER SER A . n A 1 127 TRP 127 133 133 TRP TRP A . n A 1 128 GLN 128 134 134 GLN GLN A . n A 1 129 THR 129 135 135 THR THR A . n A 1 130 VAL 130 136 136 VAL VAL A . n A 1 131 PRO 131 137 137 PRO PRO A . n A 1 132 GLY 132 138 138 GLY GLY A . n A 1 133 ALA 133 139 139 ALA ALA A . n A 1 134 PRO 134 140 140 PRO PRO A . n A 1 135 SER 135 141 141 SER SER A . n A 1 136 TRP 136 142 142 TRP TRP A . n A 1 137 LEU 137 143 143 LEU LEU A . n A 1 138 ASP 138 144 144 ASP ASP A . n A 1 139 LEU 139 145 145 LEU LEU A . n A 1 140 PRO 140 146 146 PRO PRO A . n A 1 141 ILE 141 147 147 ILE ILE A . n A 1 142 LYS 142 148 148 LYS LYS A . n A 1 143 VAL 143 149 149 VAL VAL A . n A 1 144 LEU 144 150 150 LEU LEU A . n A 1 145 ASN 145 151 151 ASN ASN A . n A 1 146 ALA 146 152 152 ALA ALA A . n A 1 147 ASP 147 153 153 ASP ASP A . n A 1 148 GLN 148 154 154 GLN GLN A . n A 1 149 GLY 149 155 155 GLY GLY A . n A 1 150 THR 150 156 156 THR THR A . n A 1 151 SER 151 157 157 SER SER A . n A 1 152 ALA 152 158 158 ALA ALA A . n A 1 153 THR 153 159 159 THR THR A . n A 1 154 VAL 154 160 160 VAL VAL A . n A 1 155 GLN 155 161 161 GLN GLN A . n A 1 156 MET 156 162 162 MET MET A . n A 1 157 LEU 157 163 163 LEU LEU A . n A 1 158 LEU 158 164 164 LEU LEU A . n A 1 159 ASN 159 165 165 ASN ASN A . n A 1 160 ASP 160 166 166 ASP ASP A . n A 1 161 THR 161 167 167 THR THR A . n A 1 162 CYS 162 168 168 CYS CYS A . n A 1 163 PRO 163 169 169 PRO PRO A . n A 1 164 LEU 164 170 170 LEU LEU A . n A 1 165 PHE 165 171 171 PHE PHE A . n A 1 166 VAL 166 172 172 VAL VAL A . n A 1 167 ARG 167 173 173 ARG ARG A . n A 1 168 GLY 168 174 174 GLY GLY A . n A 1 169 LEU 169 175 175 LEU LEU A . n A 1 170 LEU 170 176 176 LEU LEU A . n A 1 171 GLU 171 177 177 GLU GLU A . n A 1 172 ALA 172 178 178 ALA ALA A . n A 1 173 GLY 173 179 179 GLY GLY A . n A 1 174 LYS 174 180 180 LYS LYS A . n A 1 175 SER 175 181 181 SER SER A . n A 1 176 ASP 176 182 182 ASP ASP A . n A 1 177 LEU 177 183 183 LEU LEU A . n A 1 178 GLU 178 184 184 GLU GLU A . n A 1 179 LYS 179 185 185 LYS LYS A . n A 1 180 GLN 180 186 186 GLN GLN A . n A 1 181 GLU 181 187 187 GLU GLU A . n A 1 182 LYS 182 188 188 LYS LYS A . n A 1 183 PRO 183 189 189 PRO PRO A . n A 1 184 VAL 184 190 190 VAL VAL A . n A 1 185 ALA 185 191 191 ALA ALA A . n A 1 186 TRP 186 192 192 TRP TRP A . n A 1 187 LEU 187 193 193 LEU LEU A . n A 1 188 SER 188 194 194 SER SER A . n A 1 189 SER 189 195 195 SER SER A . n A 1 190 VAL 190 196 196 VAL VAL A . n A 1 191 PRO 191 197 197 PRO PRO A . n A 1 192 SER 192 198 198 SER SER A . n A 1 193 SER 193 199 199 SER SER A . n A 1 194 ALA 194 200 200 ALA ALA A . n A 1 195 HIS 195 201 201 HIS HIS A . n A 1 196 GLY 196 202 202 GLY GLY A . n A 1 197 HIS 197 203 203 HIS HIS A . n A 1 198 ARG 198 204 204 ARG ARG A . n A 1 199 GLN 199 205 205 GLN GLN A . n A 1 200 LEU 200 206 206 LEU LEU A . n A 1 201 VAL 201 207 207 VAL VAL A . n A 1 202 CYS 202 208 208 CYS CYS A . n A 1 203 HIS 203 209 209 HIS HIS A . n A 1 204 VAL 204 210 210 VAL VAL A . n A 1 205 SER 205 211 211 SER SER A . n A 1 206 GLY 206 212 212 GLY GLY A . n A 1 207 PHE 207 213 213 PHE PHE A . n A 1 208 TYR 208 214 214 TYR TYR A . n A 1 209 PRO 209 215 215 PRO PRO A . n A 1 210 LYS 210 216 216 LYS LYS A . n A 1 211 PRO 211 217 217 PRO PRO A . n A 1 212 VAL 212 218 218 VAL VAL A . n A 1 213 TRP 213 219 219 TRP TRP A . n A 1 214 VAL 214 220 220 VAL VAL A . n A 1 215 MET 215 221 221 MET MET A . n A 1 216 TRP 216 222 222 TRP TRP A . n A 1 217 MET 217 223 223 MET MET A . n A 1 218 ARG 218 224 224 ARG ARG A . n A 1 219 GLY 219 225 225 GLY GLY A . n A 1 220 ASP 220 226 226 ASP ASP A . n A 1 221 GLN 221 227 227 GLN GLN A . n A 1 222 GLU 222 228 228 GLU GLU A . n A 1 223 GLN 223 229 229 GLN GLN A . n A 1 224 GLN 224 230 230 GLN GLN A . n A 1 225 GLY 225 231 231 GLY GLY A . n A 1 226 THR 226 232 232 THR THR A . n A 1 227 HIS 227 233 233 HIS HIS A . n A 1 228 ARG 228 234 234 ARG ARG A . n A 1 229 GLY 229 235 235 GLY GLY A . n A 1 230 ASP 230 236 236 ASP ASP A . n A 1 231 PHE 231 237 237 PHE PHE A . n A 1 232 LEU 232 238 238 LEU LEU A . n A 1 233 PRO 233 239 239 PRO PRO A . n A 1 234 ASN 234 240 240 ASN ASN A . n A 1 235 ALA 235 241 241 ALA ALA A . n A 1 236 ASP 236 242 242 ASP ASP A . n A 1 237 GLU 237 243 243 GLU GLU A . n A 1 238 THR 238 244 244 THR THR A . n A 1 239 TRP 239 245 245 TRP TRP A . n A 1 240 TYR 240 246 246 TYR TYR A . n A 1 241 LEU 241 247 247 LEU LEU A . n A 1 242 GLN 242 248 248 GLN GLN A . n A 1 243 ALA 243 249 249 ALA ALA A . n A 1 244 THR 244 250 250 THR THR A . n A 1 245 LEU 245 251 251 LEU LEU A . n A 1 246 ASP 246 252 252 ASP ASP A . n A 1 247 VAL 247 253 253 VAL VAL A . n A 1 248 GLU 248 254 254 GLU GLU A . n A 1 249 ALA 249 255 255 ALA ALA A . n A 1 250 GLY 250 256 256 GLY GLY A . n A 1 251 GLU 251 257 257 GLU GLU A . n A 1 252 GLU 252 258 258 GLU GLU A . n A 1 253 ALA 253 259 259 ALA ALA A . n A 1 254 GLY 254 260 260 GLY GLY A . n A 1 255 LEU 255 261 261 LEU LEU A . n A 1 256 ALA 256 262 262 ALA ALA A . n A 1 257 CYS 257 263 263 CYS CYS A . n A 1 258 ARG 258 264 264 ARG ARG A . n A 1 259 VAL 259 265 265 VAL VAL A . n A 1 260 LYS 260 266 266 LYS LYS A . n A 1 261 HIS 261 267 267 HIS HIS A . n A 1 262 SER 262 268 268 SER SER A . n A 1 263 SER 263 269 269 SER SER A . n A 1 264 LEU 264 270 270 LEU LEU A . n A 1 265 GLY 265 271 271 GLY GLY A . n A 1 266 GLY 266 272 272 GLY GLY A . n A 1 267 GLN 267 273 273 GLN GLN A . n A 1 268 ASP 268 274 274 ASP ASP A . n A 1 269 ILE 269 275 275 ILE ILE A . n A 1 270 ILE 270 276 276 ILE ILE A . n A 1 271 LEU 271 277 277 LEU LEU A . n A 1 272 TYR 272 278 278 TYR TYR A . n A 1 273 TRP 273 279 279 TRP TRP A . n B 2 1 ILE 1 1 1 ILE ILE B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 LYS 3 3 3 LYS LYS B . n B 2 4 THR 4 4 4 THR THR B . n B 2 5 PRO 5 5 5 PRO PRO B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 ILE 7 7 7 ILE ILE B . n B 2 8 GLN 8 8 8 GLN GLN B . n B 2 9 VAL 9 9 9 VAL VAL B . n B 2 10 TYR 10 10 10 TYR TYR B . n B 2 11 SER 11 11 11 SER SER B . n B 2 12 ARG 12 12 12 ARG ARG B . n B 2 13 HIS 13 13 13 HIS HIS B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 ASN 17 17 17 ASN ASN B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 LYS 19 19 19 LYS LYS B . n B 2 20 PRO 20 20 20 PRO PRO B . n B 2 21 ASN 21 21 21 ASN ASN B . n B 2 22 ILE 22 22 22 ILE ILE B . n B 2 23 LEU 23 23 23 LEU LEU B . n B 2 24 ASN 24 24 24 ASN ASN B . n B 2 25 CYS 25 25 25 CYS CYS B . n B 2 26 TYR 26 26 26 TYR TYR B . n B 2 27 VAL 27 27 27 VAL VAL B . n B 2 28 THR 28 28 28 THR THR B . n B 2 29 GLN 29 29 29 GLN GLN B . n B 2 30 PHE 30 30 30 PHE PHE B . n B 2 31 HIS 31 31 31 HIS HIS B . n B 2 32 PRO 32 32 32 PRO PRO B . n B 2 33 PRO 33 33 33 PRO PRO B . n B 2 34 HIS 34 34 34 HIS HIS B . n B 2 35 ILE 35 35 35 ILE ILE B . n B 2 36 GLU 36 36 36 GLU GLU B . n B 2 37 ILE 37 37 37 ILE ILE B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 MET 39 39 39 MET MET B . n B 2 40 LEU 40 40 40 LEU LEU B . n B 2 41 LYS 41 41 41 LYS LYS B . n B 2 42 ASN 42 42 42 ASN ASN B . n B 2 43 GLY 43 43 43 GLY GLY B . n B 2 44 LYS 44 44 44 LYS LYS B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 ILE 46 46 46 ILE ILE B . n B 2 47 PRO 47 47 47 PRO PRO B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 VAL 49 49 49 VAL VAL B . n B 2 50 GLU 50 50 50 GLU GLU B . n B 2 51 MET 51 51 51 MET MET B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 ASP 53 53 53 ASP ASP B . n B 2 54 MET 54 54 54 MET MET B . n B 2 55 SER 55 55 55 SER SER B . n B 2 56 PHE 56 56 56 PHE PHE B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 LYS 58 58 58 LYS LYS B . n B 2 59 ASP 59 59 59 ASP ASP B . n B 2 60 TRP 60 60 60 TRP TRP B . n B 2 61 SER 61 61 61 SER SER B . n B 2 62 PHE 62 62 62 PHE PHE B . n B 2 63 TYR 63 63 63 TYR TYR B . n B 2 64 ILE 64 64 64 ILE ILE B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 ALA 66 66 66 ALA ALA B . n B 2 67 HIS 67 67 67 HIS HIS B . n B 2 68 THR 68 68 68 THR THR B . n B 2 69 GLU 69 69 69 GLU GLU B . n B 2 70 PHE 70 70 70 PHE PHE B . n B 2 71 THR 71 71 71 THR THR B . n B 2 72 PRO 72 72 72 PRO PRO B . n B 2 73 THR 73 73 73 THR THR B . n B 2 74 GLU 74 74 74 GLU GLU B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 ASP 76 76 76 ASP ASP B . n B 2 77 THR 77 77 77 THR THR B . n B 2 78 TYR 78 78 78 TYR TYR B . n B 2 79 ALA 79 79 79 ALA ALA B . n B 2 80 CYS 80 80 80 CYS CYS B . n B 2 81 ARG 81 81 81 ARG ARG B . n B 2 82 VAL 82 82 82 VAL VAL B . n B 2 83 LYS 83 83 83 LYS LYS B . n B 2 84 HIS 84 84 84 HIS HIS B . n B 2 85 ASP 85 85 85 ASP ASP B . n B 2 86 SER 86 86 86 SER SER B . n B 2 87 MET 87 87 87 MET MET B . n B 2 88 ALA 88 88 88 ALA ALA B . n B 2 89 GLU 89 89 89 GLU GLU B . n B 2 90 PRO 90 90 90 PRO PRO B . n B 2 91 LYS 91 91 91 LYS LYS B . n B 2 92 THR 92 92 92 THR THR B . n B 2 93 VAL 93 93 93 VAL VAL B . n B 2 94 TYR 94 94 94 TYR TYR B . n B 2 95 TRP 95 95 95 TRP TRP B . n B 2 96 ASP 96 96 96 ASP ASP B . n B 2 97 ARG 97 97 97 ARG ARG B . n B 2 98 ASP 98 98 98 ASP ASP B . n B 2 99 MET 99 99 99 MET MET B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 2 2 NAG NAG A . F 6 PC6 1 1 1 PC6 PC6 A . G 7 GOL 1 2002 2002 GOL GOL B . H 8 HOH 1 288 3 HOH HOH A . H 8 HOH 2 289 6 HOH HOH A . H 8 HOH 3 290 8 HOH HOH A . H 8 HOH 4 291 12 HOH HOH A . H 8 HOH 5 292 18 HOH HOH A . H 8 HOH 6 293 20 HOH HOH A . H 8 HOH 7 294 22 HOH HOH A . H 8 HOH 8 295 24 HOH HOH A . H 8 HOH 9 296 28 HOH HOH A . H 8 HOH 10 297 30 HOH HOH A . H 8 HOH 11 298 31 HOH HOH A . H 8 HOH 12 299 32 HOH HOH A . H 8 HOH 13 300 36 HOH HOH A . H 8 HOH 14 301 37 HOH HOH A . H 8 HOH 15 302 38 HOH HOH A . H 8 HOH 16 303 45 HOH HOH A . H 8 HOH 17 304 48 HOH HOH A . H 8 HOH 18 305 49 HOH HOH A . H 8 HOH 19 306 50 HOH HOH A . H 8 HOH 20 307 51 HOH HOH A . H 8 HOH 21 308 52 HOH HOH A . H 8 HOH 22 309 53 HOH HOH A . H 8 HOH 23 310 54 HOH HOH A . H 8 HOH 24 311 55 HOH HOH A . H 8 HOH 25 312 57 HOH HOH A . H 8 HOH 26 313 58 HOH HOH A . H 8 HOH 27 314 59 HOH HOH A . H 8 HOH 28 315 61 HOH HOH A . H 8 HOH 29 316 63 HOH HOH A . H 8 HOH 30 317 66 HOH HOH A . H 8 HOH 31 318 67 HOH HOH A . H 8 HOH 32 319 68 HOH HOH A . H 8 HOH 33 320 69 HOH HOH A . I 8 HOH 1 2003 2 HOH HOH B . I 8 HOH 2 2004 4 HOH HOH B . I 8 HOH 3 2005 13 HOH HOH B . I 8 HOH 4 2006 15 HOH HOH B . I 8 HOH 5 2007 17 HOH HOH B . I 8 HOH 6 2008 21 HOH HOH B . I 8 HOH 7 2009 25 HOH HOH B . I 8 HOH 8 2010 27 HOH HOH B . I 8 HOH 9 2011 29 HOH HOH B . I 8 HOH 10 2012 33 HOH HOH B . I 8 HOH 11 2013 35 HOH HOH B . I 8 HOH 12 2014 40 HOH HOH B . I 8 HOH 13 2015 41 HOH HOH B . I 8 HOH 14 2016 46 HOH HOH B . I 8 HOH 15 2017 56 HOH HOH B . I 8 HOH 16 2018 62 HOH HOH B . I 8 HOH 17 2019 64 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 14 A ASN 20 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 36 A ASN 42 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 159 A ASN 165 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7160 ? 1 MORE 5 ? 1 'SSA (A^2)' 19160 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-08-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Refinement description' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' database_PDB_caveat 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' pdbx_validate_chiral 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' chem_comp_atom 21 5 'Structure model' chem_comp_bond 22 5 'Structure model' database_2 23 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_chem_comp.name' 15 4 'Structure model' '_chem_comp.type' 16 4 'Structure model' '_entity.formula_weight' 17 4 'Structure model' '_entity.pdbx_description' 18 4 'Structure model' '_entity.pdbx_number_of_molecules' 19 4 'Structure model' '_entity.type' 20 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 21 4 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 22 4 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.pdbx_role' 26 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 40 5 'Structure model' '_chem_comp.pdbx_synonyms' 41 5 'Structure model' '_database_2.pdbx_DOI' 42 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' . ? 2 MOLREP phasing . ? 3 REFMAC refinement 5.2 ? 4 CCP4 'data scaling' '(SCALA)' ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 289 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 293 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 34 ? ? CG A ASP 34 ? ? OD2 A ASP 34 ? ? 124.32 118.30 6.02 0.90 N 2 1 CB B ASP 98 ? ? CG B ASP 98 ? ? OD2 B ASP 98 ? ? 123.92 118.30 5.62 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 20 ? ? -127.54 -145.81 2 1 SER A 89 ? ? 47.70 -144.53 3 1 LYS A 91 ? ? 178.84 107.58 4 1 LEU A 116 ? ? -161.54 115.23 5 1 VAL A 125 ? ? -130.99 -36.81 6 1 ASP A 166 ? ? -105.64 -66.49 7 1 HIS B 31 ? ? -175.41 136.46 8 1 LYS B 48 ? ? -95.30 30.49 9 1 TRP B 60 ? ? 72.48 -15.88 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 SER _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 89 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 90 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 145.34 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? C NAG 1 ? 'WRONG HAND' . 2 1 C1 ? D MAN 3 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 93 ? A ASP 87 2 1 Y 1 A TYR 94 ? A TYR 88 3 1 Y 1 A PRO 95 ? A PRO 89 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FUC C1 C N R 88 FUC C2 C N S 89 FUC C3 C N R 90 FUC C4 C N S 91 FUC C5 C N S 92 FUC C6 C N N 93 FUC O1 O N N 94 FUC O2 O N N 95 FUC O3 O N N 96 FUC O4 O N N 97 FUC O5 O N N 98 FUC H1 H N N 99 FUC H2 H N N 100 FUC H3 H N N 101 FUC H4 H N N 102 FUC H5 H N N 103 FUC H61 H N N 104 FUC H62 H N N 105 FUC H63 H N N 106 FUC HO1 H N N 107 FUC HO2 H N N 108 FUC HO3 H N N 109 FUC HO4 H N N 110 GLN N N N N 111 GLN CA C N S 112 GLN C C N N 113 GLN O O N N 114 GLN CB C N N 115 GLN CG C N N 116 GLN CD C N N 117 GLN OE1 O N N 118 GLN NE2 N N N 119 GLN OXT O N N 120 GLN H H N N 121 GLN H2 H N N 122 GLN HA H N N 123 GLN HB2 H N N 124 GLN HB3 H N N 125 GLN HG2 H N N 126 GLN HG3 H N N 127 GLN HE21 H N N 128 GLN HE22 H N N 129 GLN HXT H N N 130 GLU N N N N 131 GLU CA C N S 132 GLU C C N N 133 GLU O O N N 134 GLU CB C N N 135 GLU CG C N N 136 GLU CD C N N 137 GLU OE1 O N N 138 GLU OE2 O N N 139 GLU OXT O N N 140 GLU H H N N 141 GLU H2 H N N 142 GLU HA H N N 143 GLU HB2 H N N 144 GLU HB3 H N N 145 GLU HG2 H N N 146 GLU HG3 H N N 147 GLU HE2 H N N 148 GLU HXT H N N 149 GLY N N N N 150 GLY CA C N N 151 GLY C C N N 152 GLY O O N N 153 GLY OXT O N N 154 GLY H H N N 155 GLY H2 H N N 156 GLY HA2 H N N 157 GLY HA3 H N N 158 GLY HXT H N N 159 GOL C1 C N N 160 GOL O1 O N N 161 GOL C2 C N N 162 GOL O2 O N N 163 GOL C3 C N N 164 GOL O3 O N N 165 GOL H11 H N N 166 GOL H12 H N N 167 GOL HO1 H N N 168 GOL H2 H N N 169 GOL HO2 H N N 170 GOL H31 H N N 171 GOL H32 H N N 172 GOL HO3 H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 HOH O O N N 195 HOH H1 H N N 196 HOH H2 H N N 197 ILE N N N N 198 ILE CA C N S 199 ILE C C N N 200 ILE O O N N 201 ILE CB C N S 202 ILE CG1 C N N 203 ILE CG2 C N N 204 ILE CD1 C N N 205 ILE OXT O N N 206 ILE H H N N 207 ILE H2 H N N 208 ILE HA H N N 209 ILE HB H N N 210 ILE HG12 H N N 211 ILE HG13 H N N 212 ILE HG21 H N N 213 ILE HG22 H N N 214 ILE HG23 H N N 215 ILE HD11 H N N 216 ILE HD12 H N N 217 ILE HD13 H N N 218 ILE HXT H N N 219 LEU N N N N 220 LEU CA C N S 221 LEU C C N N 222 LEU O O N N 223 LEU CB C N N 224 LEU CG C N N 225 LEU CD1 C N N 226 LEU CD2 C N N 227 LEU OXT O N N 228 LEU H H N N 229 LEU H2 H N N 230 LEU HA H N N 231 LEU HB2 H N N 232 LEU HB3 H N N 233 LEU HG H N N 234 LEU HD11 H N N 235 LEU HD12 H N N 236 LEU HD13 H N N 237 LEU HD21 H N N 238 LEU HD22 H N N 239 LEU HD23 H N N 240 LEU HXT H N N 241 LYS N N N N 242 LYS CA C N S 243 LYS C C N N 244 LYS O O N N 245 LYS CB C N N 246 LYS CG C N N 247 LYS CD C N N 248 LYS CE C N N 249 LYS NZ N N N 250 LYS OXT O N N 251 LYS H H N N 252 LYS H2 H N N 253 LYS HA H N N 254 LYS HB2 H N N 255 LYS HB3 H N N 256 LYS HG2 H N N 257 LYS HG3 H N N 258 LYS HD2 H N N 259 LYS HD3 H N N 260 LYS HE2 H N N 261 LYS HE3 H N N 262 LYS HZ1 H N N 263 LYS HZ2 H N N 264 LYS HZ3 H N N 265 LYS HXT H N N 266 MAN C1 C N S 267 MAN C2 C N S 268 MAN C3 C N S 269 MAN C4 C N S 270 MAN C5 C N R 271 MAN C6 C N N 272 MAN O1 O N N 273 MAN O2 O N N 274 MAN O3 O N N 275 MAN O4 O N N 276 MAN O5 O N N 277 MAN O6 O N N 278 MAN H1 H N N 279 MAN H2 H N N 280 MAN H3 H N N 281 MAN H4 H N N 282 MAN H5 H N N 283 MAN H61 H N N 284 MAN H62 H N N 285 MAN HO1 H N N 286 MAN HO2 H N N 287 MAN HO3 H N N 288 MAN HO4 H N N 289 MAN HO6 H N N 290 MET N N N N 291 MET CA C N S 292 MET C C N N 293 MET O O N N 294 MET CB C N N 295 MET CG C N N 296 MET SD S N N 297 MET CE C N N 298 MET OXT O N N 299 MET H H N N 300 MET H2 H N N 301 MET HA H N N 302 MET HB2 H N N 303 MET HB3 H N N 304 MET HG2 H N N 305 MET HG3 H N N 306 MET HE1 H N N 307 MET HE2 H N N 308 MET HE3 H N N 309 MET HXT H N N 310 NAG C1 C N R 311 NAG C2 C N R 312 NAG C3 C N R 313 NAG C4 C N S 314 NAG C5 C N R 315 NAG C6 C N N 316 NAG C7 C N N 317 NAG C8 C N N 318 NAG N2 N N N 319 NAG O1 O N N 320 NAG O3 O N N 321 NAG O4 O N N 322 NAG O5 O N N 323 NAG O6 O N N 324 NAG O7 O N N 325 NAG H1 H N N 326 NAG H2 H N N 327 NAG H3 H N N 328 NAG H4 H N N 329 NAG H5 H N N 330 NAG H61 H N N 331 NAG H62 H N N 332 NAG H81 H N N 333 NAG H82 H N N 334 NAG H83 H N N 335 NAG HN2 H N N 336 NAG HO1 H N N 337 NAG HO3 H N N 338 NAG HO4 H N N 339 NAG HO6 H N N 340 PC6 OP2 O N N 341 PC6 P P N N 342 PC6 OP3 O N N 343 PC6 OP4 O N N 344 PC6 CE1 C N N 345 PC6 CE2 C N N 346 PC6 NM3 N N N 347 PC6 CM3 C N N 348 PC6 CM2 C N N 349 PC6 CM1 C N N 350 PC6 OP1 O N N 351 PC6 C39 C N N 352 PC6 C38 C N R 353 PC6 C40 C N N 354 PC6 O40 O N N 355 PC6 C26 C N N 356 PC6 O26 O N N 357 PC6 C27 C N N 358 PC6 C28 C N N 359 PC6 C29 C N N 360 PC6 C30 C N N 361 PC6 C31 C N N 362 PC6 C32 C N N 363 PC6 C33 C N N 364 PC6 C34 C N N 365 PC6 C35 C N N 366 PC6 C36 C N N 367 PC6 C37 C N N 368 PC6 O38 O N N 369 PC6 C1 C N N 370 PC6 O1 O N N 371 PC6 C2 C N N 372 PC6 C3 C N N 373 PC6 C4 C N N 374 PC6 C5 C N N 375 PC6 C6 C N N 376 PC6 C7 C N N 377 PC6 C8 C N N 378 PC6 C9 C N N 379 PC6 C10 C N N 380 PC6 C11 C N N 381 PC6 C12 C N N 382 PC6 C13 C N N 383 PC6 C14 C N N 384 PC6 C15 C N N 385 PC6 C16 C N N 386 PC6 C17 C N N 387 PC6 C18 C N N 388 PC6 C19 C N N 389 PC6 C20 C N N 390 PC6 C21 C N N 391 PC6 C22 C N N 392 PC6 C23 C N N 393 PC6 C24 C N N 394 PC6 C25 C N N 395 PC6 HE11 H N N 396 PC6 HE12 H N N 397 PC6 HE21 H N N 398 PC6 HE22 H N N 399 PC6 HM31 H N N 400 PC6 HM32 H N N 401 PC6 HM33 H N N 402 PC6 HM21 H N N 403 PC6 HM22 H N N 404 PC6 HM23 H N N 405 PC6 HM11 H N N 406 PC6 HM12 H N N 407 PC6 HM13 H N N 408 PC6 H391 H N N 409 PC6 H392 H N N 410 PC6 H38 H N N 411 PC6 H401 H N N 412 PC6 H402 H N N 413 PC6 H271 H N N 414 PC6 H272 H N N 415 PC6 H281 H N N 416 PC6 H282 H N N 417 PC6 H291 H N N 418 PC6 H292 H N N 419 PC6 H301 H N N 420 PC6 H302 H N N 421 PC6 H311 H N N 422 PC6 H312 H N N 423 PC6 H321 H N N 424 PC6 H322 H N N 425 PC6 H331 H N N 426 PC6 H332 H N N 427 PC6 H341 H N N 428 PC6 H342 H N N 429 PC6 H351 H N N 430 PC6 H352 H N N 431 PC6 H361 H N N 432 PC6 H362 H N N 433 PC6 H371 H N N 434 PC6 H372 H N N 435 PC6 H373 H N N 436 PC6 H21 H N N 437 PC6 H22 H N N 438 PC6 H31 H N N 439 PC6 H32 H N N 440 PC6 H41 H N N 441 PC6 H42 H N N 442 PC6 H51 H N N 443 PC6 H52 H N N 444 PC6 H61 H N N 445 PC6 H62 H N N 446 PC6 H71 H N N 447 PC6 H72 H N N 448 PC6 H81 H N N 449 PC6 H82 H N N 450 PC6 H91 H N N 451 PC6 H92 H N N 452 PC6 H101 H N N 453 PC6 H102 H N N 454 PC6 H111 H N N 455 PC6 H112 H N N 456 PC6 H121 H N N 457 PC6 H122 H N N 458 PC6 H131 H N N 459 PC6 H132 H N N 460 PC6 H141 H N N 461 PC6 H142 H N N 462 PC6 H151 H N N 463 PC6 H152 H N N 464 PC6 H161 H N N 465 PC6 H162 H N N 466 PC6 H171 H N N 467 PC6 H172 H N N 468 PC6 H181 H N N 469 PC6 H182 H N N 470 PC6 H191 H N N 471 PC6 H192 H N N 472 PC6 H201 H N N 473 PC6 H202 H N N 474 PC6 H211 H N N 475 PC6 H212 H N N 476 PC6 H221 H N N 477 PC6 H222 H N N 478 PC6 H231 H N N 479 PC6 H232 H N N 480 PC6 H241 H N N 481 PC6 H242 H N N 482 PC6 H251 H N N 483 PC6 H252 H N N 484 PC6 H253 H N N 485 PHE N N N N 486 PHE CA C N S 487 PHE C C N N 488 PHE O O N N 489 PHE CB C N N 490 PHE CG C Y N 491 PHE CD1 C Y N 492 PHE CD2 C Y N 493 PHE CE1 C Y N 494 PHE CE2 C Y N 495 PHE CZ C Y N 496 PHE OXT O N N 497 PHE H H N N 498 PHE H2 H N N 499 PHE HA H N N 500 PHE HB2 H N N 501 PHE HB3 H N N 502 PHE HD1 H N N 503 PHE HD2 H N N 504 PHE HE1 H N N 505 PHE HE2 H N N 506 PHE HZ H N N 507 PHE HXT H N N 508 PRO N N N N 509 PRO CA C N S 510 PRO C C N N 511 PRO O O N N 512 PRO CB C N N 513 PRO CG C N N 514 PRO CD C N N 515 PRO OXT O N N 516 PRO H H N N 517 PRO HA H N N 518 PRO HB2 H N N 519 PRO HB3 H N N 520 PRO HG2 H N N 521 PRO HG3 H N N 522 PRO HD2 H N N 523 PRO HD3 H N N 524 PRO HXT H N N 525 SER N N N N 526 SER CA C N S 527 SER C C N N 528 SER O O N N 529 SER CB C N N 530 SER OG O N N 531 SER OXT O N N 532 SER H H N N 533 SER H2 H N N 534 SER HA H N N 535 SER HB2 H N N 536 SER HB3 H N N 537 SER HG H N N 538 SER HXT H N N 539 THR N N N N 540 THR CA C N S 541 THR C C N N 542 THR O O N N 543 THR CB C N R 544 THR OG1 O N N 545 THR CG2 C N N 546 THR OXT O N N 547 THR H H N N 548 THR H2 H N N 549 THR HA H N N 550 THR HB H N N 551 THR HG1 H N N 552 THR HG21 H N N 553 THR HG22 H N N 554 THR HG23 H N N 555 THR HXT H N N 556 TRP N N N N 557 TRP CA C N S 558 TRP C C N N 559 TRP O O N N 560 TRP CB C N N 561 TRP CG C Y N 562 TRP CD1 C Y N 563 TRP CD2 C Y N 564 TRP NE1 N Y N 565 TRP CE2 C Y N 566 TRP CE3 C Y N 567 TRP CZ2 C Y N 568 TRP CZ3 C Y N 569 TRP CH2 C Y N 570 TRP OXT O N N 571 TRP H H N N 572 TRP H2 H N N 573 TRP HA H N N 574 TRP HB2 H N N 575 TRP HB3 H N N 576 TRP HD1 H N N 577 TRP HE1 H N N 578 TRP HE3 H N N 579 TRP HZ2 H N N 580 TRP HZ3 H N N 581 TRP HH2 H N N 582 TRP HXT H N N 583 TYR N N N N 584 TYR CA C N S 585 TYR C C N N 586 TYR O O N N 587 TYR CB C N N 588 TYR CG C Y N 589 TYR CD1 C Y N 590 TYR CD2 C Y N 591 TYR CE1 C Y N 592 TYR CE2 C Y N 593 TYR CZ C Y N 594 TYR OH O N N 595 TYR OXT O N N 596 TYR H H N N 597 TYR H2 H N N 598 TYR HA H N N 599 TYR HB2 H N N 600 TYR HB3 H N N 601 TYR HD1 H N N 602 TYR HD2 H N N 603 TYR HE1 H N N 604 TYR HE2 H N N 605 TYR HH H N N 606 TYR HXT H N N 607 VAL N N N N 608 VAL CA C N S 609 VAL C C N N 610 VAL O O N N 611 VAL CB C N N 612 VAL CG1 C N N 613 VAL CG2 C N N 614 VAL OXT O N N 615 VAL H H N N 616 VAL H2 H N N 617 VAL HA H N N 618 VAL HB H N N 619 VAL HG11 H N N 620 VAL HG12 H N N 621 VAL HG13 H N N 622 VAL HG21 H N N 623 VAL HG22 H N N 624 VAL HG23 H N N 625 VAL HXT H N N 626 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GLN N CA sing N N 106 GLN N H sing N N 107 GLN N H2 sing N N 108 GLN CA C sing N N 109 GLN CA CB sing N N 110 GLN CA HA sing N N 111 GLN C O doub N N 112 GLN C OXT sing N N 113 GLN CB CG sing N N 114 GLN CB HB2 sing N N 115 GLN CB HB3 sing N N 116 GLN CG CD sing N N 117 GLN CG HG2 sing N N 118 GLN CG HG3 sing N N 119 GLN CD OE1 doub N N 120 GLN CD NE2 sing N N 121 GLN NE2 HE21 sing N N 122 GLN NE2 HE22 sing N N 123 GLN OXT HXT sing N N 124 GLU N CA sing N N 125 GLU N H sing N N 126 GLU N H2 sing N N 127 GLU CA C sing N N 128 GLU CA CB sing N N 129 GLU CA HA sing N N 130 GLU C O doub N N 131 GLU C OXT sing N N 132 GLU CB CG sing N N 133 GLU CB HB2 sing N N 134 GLU CB HB3 sing N N 135 GLU CG CD sing N N 136 GLU CG HG2 sing N N 137 GLU CG HG3 sing N N 138 GLU CD OE1 doub N N 139 GLU CD OE2 sing N N 140 GLU OE2 HE2 sing N N 141 GLU OXT HXT sing N N 142 GLY N CA sing N N 143 GLY N H sing N N 144 GLY N H2 sing N N 145 GLY CA C sing N N 146 GLY CA HA2 sing N N 147 GLY CA HA3 sing N N 148 GLY C O doub N N 149 GLY C OXT sing N N 150 GLY OXT HXT sing N N 151 GOL C1 O1 sing N N 152 GOL C1 C2 sing N N 153 GOL C1 H11 sing N N 154 GOL C1 H12 sing N N 155 GOL O1 HO1 sing N N 156 GOL C2 O2 sing N N 157 GOL C2 C3 sing N N 158 GOL C2 H2 sing N N 159 GOL O2 HO2 sing N N 160 GOL C3 O3 sing N N 161 GOL C3 H31 sing N N 162 GOL C3 H32 sing N N 163 GOL O3 HO3 sing N N 164 HIS N CA sing N N 165 HIS N H sing N N 166 HIS N H2 sing N N 167 HIS CA C sing N N 168 HIS CA CB sing N N 169 HIS CA HA sing N N 170 HIS C O doub N N 171 HIS C OXT sing N N 172 HIS CB CG sing N N 173 HIS CB HB2 sing N N 174 HIS CB HB3 sing N N 175 HIS CG ND1 sing Y N 176 HIS CG CD2 doub Y N 177 HIS ND1 CE1 doub Y N 178 HIS ND1 HD1 sing N N 179 HIS CD2 NE2 sing Y N 180 HIS CD2 HD2 sing N N 181 HIS CE1 NE2 sing Y N 182 HIS CE1 HE1 sing N N 183 HIS NE2 HE2 sing N N 184 HIS OXT HXT sing N N 185 HOH O H1 sing N N 186 HOH O H2 sing N N 187 ILE N CA sing N N 188 ILE N H sing N N 189 ILE N H2 sing N N 190 ILE CA C sing N N 191 ILE CA CB sing N N 192 ILE CA HA sing N N 193 ILE C O doub N N 194 ILE C OXT sing N N 195 ILE CB CG1 sing N N 196 ILE CB CG2 sing N N 197 ILE CB HB sing N N 198 ILE CG1 CD1 sing N N 199 ILE CG1 HG12 sing N N 200 ILE CG1 HG13 sing N N 201 ILE CG2 HG21 sing N N 202 ILE CG2 HG22 sing N N 203 ILE CG2 HG23 sing N N 204 ILE CD1 HD11 sing N N 205 ILE CD1 HD12 sing N N 206 ILE CD1 HD13 sing N N 207 ILE OXT HXT sing N N 208 LEU N CA sing N N 209 LEU N H sing N N 210 LEU N H2 sing N N 211 LEU CA C sing N N 212 LEU CA CB sing N N 213 LEU CA HA sing N N 214 LEU C O doub N N 215 LEU C OXT sing N N 216 LEU CB CG sing N N 217 LEU CB HB2 sing N N 218 LEU CB HB3 sing N N 219 LEU CG CD1 sing N N 220 LEU CG CD2 sing N N 221 LEU CG HG sing N N 222 LEU CD1 HD11 sing N N 223 LEU CD1 HD12 sing N N 224 LEU CD1 HD13 sing N N 225 LEU CD2 HD21 sing N N 226 LEU CD2 HD22 sing N N 227 LEU CD2 HD23 sing N N 228 LEU OXT HXT sing N N 229 LYS N CA sing N N 230 LYS N H sing N N 231 LYS N H2 sing N N 232 LYS CA C sing N N 233 LYS CA CB sing N N 234 LYS CA HA sing N N 235 LYS C O doub N N 236 LYS C OXT sing N N 237 LYS CB CG sing N N 238 LYS CB HB2 sing N N 239 LYS CB HB3 sing N N 240 LYS CG CD sing N N 241 LYS CG HG2 sing N N 242 LYS CG HG3 sing N N 243 LYS CD CE sing N N 244 LYS CD HD2 sing N N 245 LYS CD HD3 sing N N 246 LYS CE NZ sing N N 247 LYS CE HE2 sing N N 248 LYS CE HE3 sing N N 249 LYS NZ HZ1 sing N N 250 LYS NZ HZ2 sing N N 251 LYS NZ HZ3 sing N N 252 LYS OXT HXT sing N N 253 MAN C1 C2 sing N N 254 MAN C1 O1 sing N N 255 MAN C1 O5 sing N N 256 MAN C1 H1 sing N N 257 MAN C2 C3 sing N N 258 MAN C2 O2 sing N N 259 MAN C2 H2 sing N N 260 MAN C3 C4 sing N N 261 MAN C3 O3 sing N N 262 MAN C3 H3 sing N N 263 MAN C4 C5 sing N N 264 MAN C4 O4 sing N N 265 MAN C4 H4 sing N N 266 MAN C5 C6 sing N N 267 MAN C5 O5 sing N N 268 MAN C5 H5 sing N N 269 MAN C6 O6 sing N N 270 MAN C6 H61 sing N N 271 MAN C6 H62 sing N N 272 MAN O1 HO1 sing N N 273 MAN O2 HO2 sing N N 274 MAN O3 HO3 sing N N 275 MAN O4 HO4 sing N N 276 MAN O6 HO6 sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 NAG C1 C2 sing N N 297 NAG C1 O1 sing N N 298 NAG C1 O5 sing N N 299 NAG C1 H1 sing N N 300 NAG C2 C3 sing N N 301 NAG C2 N2 sing N N 302 NAG C2 H2 sing N N 303 NAG C3 C4 sing N N 304 NAG C3 O3 sing N N 305 NAG C3 H3 sing N N 306 NAG C4 C5 sing N N 307 NAG C4 O4 sing N N 308 NAG C4 H4 sing N N 309 NAG C5 C6 sing N N 310 NAG C5 O5 sing N N 311 NAG C5 H5 sing N N 312 NAG C6 O6 sing N N 313 NAG C6 H61 sing N N 314 NAG C6 H62 sing N N 315 NAG C7 C8 sing N N 316 NAG C7 N2 sing N N 317 NAG C7 O7 doub N N 318 NAG C8 H81 sing N N 319 NAG C8 H82 sing N N 320 NAG C8 H83 sing N N 321 NAG N2 HN2 sing N N 322 NAG O1 HO1 sing N N 323 NAG O3 HO3 sing N N 324 NAG O4 HO4 sing N N 325 NAG O6 HO6 sing N N 326 PC6 OP2 P doub N N 327 PC6 P OP3 sing N N 328 PC6 P OP4 sing N N 329 PC6 P OP1 sing N N 330 PC6 OP4 CE1 sing N N 331 PC6 CE1 CE2 sing N N 332 PC6 CE1 HE11 sing N N 333 PC6 CE1 HE12 sing N N 334 PC6 CE2 NM3 sing N N 335 PC6 CE2 HE21 sing N N 336 PC6 CE2 HE22 sing N N 337 PC6 NM3 CM3 sing N N 338 PC6 NM3 CM2 sing N N 339 PC6 NM3 CM1 sing N N 340 PC6 CM3 HM31 sing N N 341 PC6 CM3 HM32 sing N N 342 PC6 CM3 HM33 sing N N 343 PC6 CM2 HM21 sing N N 344 PC6 CM2 HM22 sing N N 345 PC6 CM2 HM23 sing N N 346 PC6 CM1 HM11 sing N N 347 PC6 CM1 HM12 sing N N 348 PC6 CM1 HM13 sing N N 349 PC6 OP1 C39 sing N N 350 PC6 C39 C38 sing N N 351 PC6 C39 H391 sing N N 352 PC6 C39 H392 sing N N 353 PC6 C38 C40 sing N N 354 PC6 C38 O38 sing N N 355 PC6 C38 H38 sing N N 356 PC6 C40 O40 sing N N 357 PC6 C40 H401 sing N N 358 PC6 C40 H402 sing N N 359 PC6 O40 C26 sing N N 360 PC6 C26 O26 doub N N 361 PC6 C26 C27 sing N N 362 PC6 C27 C28 sing N N 363 PC6 C27 H271 sing N N 364 PC6 C27 H272 sing N N 365 PC6 C28 C29 sing N N 366 PC6 C28 H281 sing N N 367 PC6 C28 H282 sing N N 368 PC6 C29 C30 sing N N 369 PC6 C29 H291 sing N N 370 PC6 C29 H292 sing N N 371 PC6 C30 C31 sing N N 372 PC6 C30 H301 sing N N 373 PC6 C30 H302 sing N N 374 PC6 C31 C32 sing N N 375 PC6 C31 H311 sing N N 376 PC6 C31 H312 sing N N 377 PC6 C32 C33 sing N N 378 PC6 C32 H321 sing N N 379 PC6 C32 H322 sing N N 380 PC6 C33 C34 sing N N 381 PC6 C33 H331 sing N N 382 PC6 C33 H332 sing N N 383 PC6 C34 C35 sing N N 384 PC6 C34 H341 sing N N 385 PC6 C34 H342 sing N N 386 PC6 C35 C36 sing N N 387 PC6 C35 H351 sing N N 388 PC6 C35 H352 sing N N 389 PC6 C36 C37 sing N N 390 PC6 C36 H361 sing N N 391 PC6 C36 H362 sing N N 392 PC6 C37 H371 sing N N 393 PC6 C37 H372 sing N N 394 PC6 C37 H373 sing N N 395 PC6 O38 C1 sing N N 396 PC6 C1 O1 doub N N 397 PC6 C1 C2 sing N N 398 PC6 C2 C3 sing N N 399 PC6 C2 H21 sing N N 400 PC6 C2 H22 sing N N 401 PC6 C3 C4 sing N N 402 PC6 C3 H31 sing N N 403 PC6 C3 H32 sing N N 404 PC6 C4 C5 sing N N 405 PC6 C4 H41 sing N N 406 PC6 C4 H42 sing N N 407 PC6 C5 C6 sing N N 408 PC6 C5 H51 sing N N 409 PC6 C5 H52 sing N N 410 PC6 C6 C7 sing N N 411 PC6 C6 H61 sing N N 412 PC6 C6 H62 sing N N 413 PC6 C7 C8 sing N N 414 PC6 C7 H71 sing N N 415 PC6 C7 H72 sing N N 416 PC6 C8 C9 sing N N 417 PC6 C8 H81 sing N N 418 PC6 C8 H82 sing N N 419 PC6 C9 C10 sing N N 420 PC6 C9 H91 sing N N 421 PC6 C9 H92 sing N N 422 PC6 C10 C11 sing N N 423 PC6 C10 H101 sing N N 424 PC6 C10 H102 sing N N 425 PC6 C11 C12 sing N N 426 PC6 C11 H111 sing N N 427 PC6 C11 H112 sing N N 428 PC6 C12 C13 sing N N 429 PC6 C12 H121 sing N N 430 PC6 C12 H122 sing N N 431 PC6 C13 C14 sing N N 432 PC6 C13 H131 sing N N 433 PC6 C13 H132 sing N N 434 PC6 C14 C15 sing N N 435 PC6 C14 H141 sing N N 436 PC6 C14 H142 sing N N 437 PC6 C15 C16 sing N N 438 PC6 C15 H151 sing N N 439 PC6 C15 H152 sing N N 440 PC6 C16 C17 sing N N 441 PC6 C16 H161 sing N N 442 PC6 C16 H162 sing N N 443 PC6 C17 C18 sing N N 444 PC6 C17 H171 sing N N 445 PC6 C17 H172 sing N N 446 PC6 C18 C19 sing N N 447 PC6 C18 H181 sing N N 448 PC6 C18 H182 sing N N 449 PC6 C19 C20 sing N N 450 PC6 C19 H191 sing N N 451 PC6 C19 H192 sing N N 452 PC6 C20 C21 sing N N 453 PC6 C20 H201 sing N N 454 PC6 C20 H202 sing N N 455 PC6 C21 C22 sing N N 456 PC6 C21 H211 sing N N 457 PC6 C21 H212 sing N N 458 PC6 C22 C23 sing N N 459 PC6 C22 H221 sing N N 460 PC6 C22 H222 sing N N 461 PC6 C23 C24 sing N N 462 PC6 C23 H231 sing N N 463 PC6 C23 H232 sing N N 464 PC6 C24 C25 sing N N 465 PC6 C24 H241 sing N N 466 PC6 C24 H242 sing N N 467 PC6 C25 H251 sing N N 468 PC6 C25 H252 sing N N 469 PC6 C25 H253 sing N N 470 PHE N CA sing N N 471 PHE N H sing N N 472 PHE N H2 sing N N 473 PHE CA C sing N N 474 PHE CA CB sing N N 475 PHE CA HA sing N N 476 PHE C O doub N N 477 PHE C OXT sing N N 478 PHE CB CG sing N N 479 PHE CB HB2 sing N N 480 PHE CB HB3 sing N N 481 PHE CG CD1 doub Y N 482 PHE CG CD2 sing Y N 483 PHE CD1 CE1 sing Y N 484 PHE CD1 HD1 sing N N 485 PHE CD2 CE2 doub Y N 486 PHE CD2 HD2 sing N N 487 PHE CE1 CZ doub Y N 488 PHE CE1 HE1 sing N N 489 PHE CE2 CZ sing Y N 490 PHE CE2 HE2 sing N N 491 PHE CZ HZ sing N N 492 PHE OXT HXT sing N N 493 PRO N CA sing N N 494 PRO N CD sing N N 495 PRO N H sing N N 496 PRO CA C sing N N 497 PRO CA CB sing N N 498 PRO CA HA sing N N 499 PRO C O doub N N 500 PRO C OXT sing N N 501 PRO CB CG sing N N 502 PRO CB HB2 sing N N 503 PRO CB HB3 sing N N 504 PRO CG CD sing N N 505 PRO CG HG2 sing N N 506 PRO CG HG3 sing N N 507 PRO CD HD2 sing N N 508 PRO CD HD3 sing N N 509 PRO OXT HXT sing N N 510 SER N CA sing N N 511 SER N H sing N N 512 SER N H2 sing N N 513 SER CA C sing N N 514 SER CA CB sing N N 515 SER CA HA sing N N 516 SER C O doub N N 517 SER C OXT sing N N 518 SER CB OG sing N N 519 SER CB HB2 sing N N 520 SER CB HB3 sing N N 521 SER OG HG sing N N 522 SER OXT HXT sing N N 523 THR N CA sing N N 524 THR N H sing N N 525 THR N H2 sing N N 526 THR CA C sing N N 527 THR CA CB sing N N 528 THR CA HA sing N N 529 THR C O doub N N 530 THR C OXT sing N N 531 THR CB OG1 sing N N 532 THR CB CG2 sing N N 533 THR CB HB sing N N 534 THR OG1 HG1 sing N N 535 THR CG2 HG21 sing N N 536 THR CG2 HG22 sing N N 537 THR CG2 HG23 sing N N 538 THR OXT HXT sing N N 539 TRP N CA sing N N 540 TRP N H sing N N 541 TRP N H2 sing N N 542 TRP CA C sing N N 543 TRP CA CB sing N N 544 TRP CA HA sing N N 545 TRP C O doub N N 546 TRP C OXT sing N N 547 TRP CB CG sing N N 548 TRP CB HB2 sing N N 549 TRP CB HB3 sing N N 550 TRP CG CD1 doub Y N 551 TRP CG CD2 sing Y N 552 TRP CD1 NE1 sing Y N 553 TRP CD1 HD1 sing N N 554 TRP CD2 CE2 doub Y N 555 TRP CD2 CE3 sing Y N 556 TRP NE1 CE2 sing Y N 557 TRP NE1 HE1 sing N N 558 TRP CE2 CZ2 sing Y N 559 TRP CE3 CZ3 doub Y N 560 TRP CE3 HE3 sing N N 561 TRP CZ2 CH2 doub Y N 562 TRP CZ2 HZ2 sing N N 563 TRP CZ3 CH2 sing Y N 564 TRP CZ3 HZ3 sing N N 565 TRP CH2 HH2 sing N N 566 TRP OXT HXT sing N N 567 TYR N CA sing N N 568 TYR N H sing N N 569 TYR N H2 sing N N 570 TYR CA C sing N N 571 TYR CA CB sing N N 572 TYR CA HA sing N N 573 TYR C O doub N N 574 TYR C OXT sing N N 575 TYR CB CG sing N N 576 TYR CB HB2 sing N N 577 TYR CB HB3 sing N N 578 TYR CG CD1 doub Y N 579 TYR CG CD2 sing Y N 580 TYR CD1 CE1 sing Y N 581 TYR CD1 HD1 sing N N 582 TYR CD2 CE2 doub Y N 583 TYR CD2 HD2 sing N N 584 TYR CE1 CZ doub Y N 585 TYR CE1 HE1 sing N N 586 TYR CE2 CZ sing Y N 587 TYR CE2 HE2 sing N N 588 TYR CZ OH sing N N 589 TYR OH HH sing N N 590 TYR OXT HXT sing N N 591 VAL N CA sing N N 592 VAL N H sing N N 593 VAL N H2 sing N N 594 VAL CA C sing N N 595 VAL CA CB sing N N 596 VAL CA HA sing N N 597 VAL C O doub N N 598 VAL C OXT sing N N 599 VAL CB CG1 sing N N 600 VAL CB CG2 sing N N 601 VAL CB HB sing N N 602 VAL CG1 HG11 sing N N 603 VAL CG1 HG12 sing N N 604 VAL CG1 HG13 sing N N 605 VAL CG2 HG21 sing N N 606 VAL CG2 HG22 sing N N 607 VAL CG2 HG23 sing N N 608 VAL OXT HXT sing N N 609 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 C NAG 1 n C 3 FUC 2 C FUC 2 C FUC 13 n D 4 NAG 1 D NAG 1 E NAG 3 n D 4 NAG 2 D NAG 2 E NAG 31 n D 4 MAN 3 D MAN 3 E MAN 32 n D 4 MAN 4 D MAN 4 E MAN 33 n D 4 MAN 5 D MAN 5 E MAN 34 n D 4 FUC 6 D FUC 6 E FUC 35 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 LFucpa1-6DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2/a6-b1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][a-D-GlcpNAc]{[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 4 4 'DManpa1-3[DManpa1-6]DManpa1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-2-2-3/a4-b1_a6-f1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 6 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 FUC C1 O1 1 NAG O6 HO6 sing ? 2 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 3 4 3 MAN C1 O1 2 NAG O4 HO4 sing ? 4 4 4 MAN C1 O1 3 MAN O3 HO3 sing ? 5 4 5 MAN C1 O1 3 MAN O6 HO6 sing ? 6 4 6 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 FUC 2 n 4 NAG 1 n 4 NAG 2 n 4 MAN 3 n 4 MAN 4 n 4 MAN 5 n 4 FUC 6 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 '7-[(DODECANOYLOXY)METHYL]-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-3,5,8-TRIOXA-4-PHOSPHADOTRIACONTAN-1-AMINIUM 4-OXIDE' PC6 7 GLYCEROL GOL 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1CD1 _pdbx_initial_refinement_model.details ? #